GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001878-TA|BGIBMGA001878-PA|undefined
         (503 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-3095|AAF46648.1|  572|Drosophila melanogaster CG15651-P...   107   5e-23
AY071018-1|AAL48640.1|  527|Drosophila melanogaster RE09574p pro...    94   4e-19
DQ138896-1|ABA86502.1| 1309|Drosophila melanogaster CG18265 prot...    34   0.53 
BT011387-1|AAR96179.1| 1322|Drosophila melanogaster GH10077p pro...    34   0.53 
AE014296-2912|AAF49339.1| 1322|Drosophila melanogaster CG18265-P...    34   0.53 
BT023229-1|AAY55645.1|  337|Drosophila melanogaster IP02849p pro...    31   3.7  
BT023204-1|AAY55620.1|  337|Drosophila melanogaster IP03049p pro...    31   3.7  
BT023196-1|AAY55612.1|  337|Drosophila melanogaster IP03149p pro...    31   3.7  
AE013599-1418|AAF58555.1|  501|Drosophila melanogaster CG8457-PA...    31   3.7  
X14037-1|CAA32198.1| 1053|Drosophila melanogaster polyprotein pr...    30   8.6  

>AE013599-3095|AAF46648.1|  572|Drosophila melanogaster CG15651-PA
           protein.
          Length = 572

 Score =  107 bits (256), Expect = 5e-23
 Identities = 58/186 (31%), Positives = 95/186 (51%), Gaps = 7/186 (3%)

Query: 305 YGCAKDTPRCFPTVKG-KPSYVYSDKHTPPCCLRNMREVTKHVLDVLEQAGVRCWLETSS 363
           +GC + T  C  +V   +P Y Y  KHTPPCCL  +R    HVL+  E  G+R WL+  +
Sbjct: 374 FGCERTTKSCIGSVYNERPYYSYLGKHTPPCCLDKLRTTFNHVLEEFENVGIRYWLDNRA 433

Query: 364 LLGAVVDGNVLVWADHVELGIYSSDIDRVPYLQRGGT----DADGFVWERATKGHYYSVS 419
           L  A+   ++   A  +++     D++R   +++  +    D +GF W +AT GH++ V 
Sbjct: 434 LQSAIETNHLSPDAYDIDISFNVQDLERSNAMKKSQSKPYVDNEGFYWIKATDGHHFRVQ 493

Query: 420 LSAINKANVLILPFTSQNGTMWPADWVLAHQ-REFPERHLHPLAQIPFAYVQAPAPNDAH 478
            S  N+  V +LP+ S +GT   A      + R F   +LHP++ + F       PN+  
Sbjct: 494 FSKPNQVGVNLLPY-SISGTEAKASGFFGWKARSFSADYLHPMSTVLFLGKSVMCPNNVL 552

Query: 479 AFLDLK 484
            +L+ K
Sbjct: 553 EYLEEK 558



 Score = 83.8 bits (198), Expect = 5e-16
 Identities = 69/266 (25%), Positives = 121/266 (45%), Gaps = 29/266 (10%)

Query: 58  KPLSSLVTVVFRQFEEADNDVADSVLSFVSAFPDMQVLVVCERSP---YPPI--ELPPTN 112
           K +   +T+VF      + D+  S+ S +   P+M +LV+ +      YPP+  E   T 
Sbjct: 67  KHIRKSITIVFYGHYNFEQDLKASIDSILDVIPNMPILVLQDGGAEYAYPPVNYERNLTA 126

Query: 113 SSYRNVKILSLDYEIDSCPYTSSPLSPFNIETEYTLFVPDSVRVKPRVLHQAVI-EANAN 171
              R V   SL +++       +PL+  +I T+Y L +PD VR+  + + Q ++ E N+ 
Sbjct: 127 GEERTVLFQSLSFDVRRTRQELNPLA--SIRTKYALIMPDGVRLNSKNILQKILREINSM 184

Query: 172 --------------PLHVIA--IGIGFH-EIK----CQRICWNYRDWTLKYTKDSTGTIC 210
                         P  ++   + + F   +K    C ++  +  DWTL+    +    C
Sbjct: 185 GLPGQPKEQRPPVPPEQLVRRMVLVPFAGNLKSFSSCVKMNLDLPDWTLELVATNDTRRC 244

Query: 211 DAVTGPHALLIKTEYLSKVPDPIALPFPESLYLQTYVKMAKVQVLYHTFGPGRKVLKTLP 270
           D     HA+L+    L+ +P+P +LPFPE LY+Q  +      V    F  GR++  +  
Sbjct: 245 DLFLQKHAILLDAAALAAMPEPFSLPFPEMLYMQAKIANLSTTVFPQAFQEGRRLFASFH 304

Query: 271 EKQIVAEKVKEQRSTFYKKYKMKIVV 296
            KQ   +  + Q    YKK ++K +V
Sbjct: 305 TKQRRMDLRRRQFREMYKKLQIKRIV 330


>AY071018-1|AAL48640.1|  527|Drosophila melanogaster RE09574p
           protein.
          Length = 527

 Score = 94.3 bits (224), Expect = 4e-19
 Identities = 47/140 (33%), Positives = 76/140 (54%), Gaps = 6/140 (4%)

Query: 305 YGCAKDTPRCFPTVKG-KPSYVYSDKHTPPCCLRNMREVTKHVLDVLEQAGVRCWLETSS 363
           +GC + T  C  +V   +P Y Y  KHTPPCCL  +R    HVL+  E  G+R WL+  +
Sbjct: 374 FGCERTTKSCIGSVYNERPYYSYLGKHTPPCCLDKLRTTFNHVLEEFENVGIRYWLDNRA 433

Query: 364 LLGAVVDGNVLVWADHVELGIYSSDIDRVPYLQRGGT----DADGFVWERATKGHYYSVS 419
           L  A+   ++   A  +++     D++R   +++  +    D +GF W +AT GH++ V 
Sbjct: 434 LQSAIETNHLSPDAYDIDISFNVQDLERSNAMKKSQSKPYVDNEGFYWIKATDGHHFRVQ 493

Query: 420 LSAINKANVLILPFTSQNGT 439
            S  N+  V +LP+ S +GT
Sbjct: 494 FSKPNQVGVNLLPY-SISGT 512



 Score = 83.8 bits (198), Expect = 5e-16
 Identities = 69/266 (25%), Positives = 121/266 (45%), Gaps = 29/266 (10%)

Query: 58  KPLSSLVTVVFRQFEEADNDVADSVLSFVSAFPDMQVLVVCERSP---YPPI--ELPPTN 112
           K +   +T+VF      + D+  S+ S +   P+M +LV+ +      YPP+  E   T 
Sbjct: 67  KHIRKSITIVFYGHYNFEQDLKASIDSILDVIPNMPILVLQDGGAEYAYPPVNYERNLTA 126

Query: 113 SSYRNVKILSLDYEIDSCPYTSSPLSPFNIETEYTLFVPDSVRVKPRVLHQAVI-EANAN 171
              R V   SL +++       +PL+  +I T+Y L +PD VR+  + + Q ++ E N+ 
Sbjct: 127 GEERTVLFQSLSFDVRRTRQELNPLA--SIRTKYALIMPDGVRLNSKNILQKILREINSM 184

Query: 172 --------------PLHVIA--IGIGFH-EIK----CQRICWNYRDWTLKYTKDSTGTIC 210
                         P  ++   + + F   +K    C ++  +  DWTL+    +    C
Sbjct: 185 GLPGQPKEQRPPVPPEQLVRRMVLVPFAGNLKSFSSCVKMNLDLPDWTLELVATNDTRRC 244

Query: 211 DAVTGPHALLIKTEYLSKVPDPIALPFPESLYLQTYVKMAKVQVLYHTFGPGRKVLKTLP 270
           D     HA+L+    L+ +P+P +LPFPE LY+Q  +      V    F  GR++  +  
Sbjct: 245 DLFLQKHAILLDAAALAAMPEPFSLPFPEMLYMQAKIANLSTTVFPQAFQEGRRLFASFH 304

Query: 271 EKQIVAEKVKEQRSTFYKKYKMKIVV 296
            KQ   +  + Q    YKK ++K +V
Sbjct: 305 TKQRRMDLRRRQFREMYKKLQIKRIV 330


>DQ138896-1|ABA86502.1| 1309|Drosophila melanogaster CG18265
           protein.
          Length = 1309

 Score = 33.9 bits (74), Expect = 0.53
 Identities = 25/86 (29%), Positives = 35/86 (40%), Gaps = 2/86 (2%)

Query: 110 PTNSSYRNVKI-LSLDYEIDSCPYTSSPLSPFNIETEYTLFVPDSVRVKPRVLHQAVIEA 168
           P   S   +K  +S D EI            F +E E   FVP   R  P  L Q   ++
Sbjct: 513 PNEPSQPTIKQEMSQDAEIKPYQLPEGFREDFTLEQEELSFVPPP-RKLPSHLQQQAKDS 571

Query: 169 NANPLHVIAIGIGFHEIKCQRICWNY 194
           N NP  +  +G+ F +  C+  C  Y
Sbjct: 572 NFNPDKLRRLGVQFPDFFCELCCREY 597


>BT011387-1|AAR96179.1| 1322|Drosophila melanogaster GH10077p
           protein.
          Length = 1322

 Score = 33.9 bits (74), Expect = 0.53
 Identities = 25/86 (29%), Positives = 35/86 (40%), Gaps = 2/86 (2%)

Query: 110 PTNSSYRNVKI-LSLDYEIDSCPYTSSPLSPFNIETEYTLFVPDSVRVKPRVLHQAVIEA 168
           P   S   +K  +S D EI            F +E E   FVP   R  P  L Q   ++
Sbjct: 520 PNEPSQPTIKQEMSQDAEIKPYQLPEGFREDFTLEQEELSFVPPP-RKLPSHLQQQAKDS 578

Query: 169 NANPLHVIAIGIGFHEIKCQRICWNY 194
           N NP  +  +G+ F +  C+  C  Y
Sbjct: 579 NFNPDKLRRLGVQFPDFFCELCCREY 604


>AE014296-2912|AAF49339.1| 1322|Drosophila melanogaster CG18265-PA
           protein.
          Length = 1322

 Score = 33.9 bits (74), Expect = 0.53
 Identities = 25/86 (29%), Positives = 35/86 (40%), Gaps = 2/86 (2%)

Query: 110 PTNSSYRNVKI-LSLDYEIDSCPYTSSPLSPFNIETEYTLFVPDSVRVKPRVLHQAVIEA 168
           P   S   +K  +S D EI            F +E E   FVP   R  P  L Q   ++
Sbjct: 520 PNEPSQPTIKQEMSQDAEIKPYQLPEGFREDFTLEQEELSFVPPP-RKLPSHLQQQAKDS 578

Query: 169 NANPLHVIAIGIGFHEIKCQRICWNY 194
           N NP  +  +G+ F +  C+  C  Y
Sbjct: 579 NFNPDKLRRLGVQFPDFFCELCCREY 604


>BT023229-1|AAY55645.1|  337|Drosophila melanogaster IP02849p
           protein.
          Length = 337

 Score = 31.1 bits (67), Expect = 3.7
 Identities = 18/48 (37%), Positives = 21/48 (43%), Gaps = 2/48 (4%)

Query: 441 WPADWVLAHQREFPER--HLHPLAQIPFAYVQAPAPNDAHAFLDLKLG 486
           WP   V   +R  PER  H+HP+  IPF              L LKLG
Sbjct: 246 WPEPCVFDPERFGPERSRHIHPMTYIPFGAGPHGCIGSRLGVLQLKLG 293


>BT023204-1|AAY55620.1|  337|Drosophila melanogaster IP03049p
           protein.
          Length = 337

 Score = 31.1 bits (67), Expect = 3.7
 Identities = 18/48 (37%), Positives = 21/48 (43%), Gaps = 2/48 (4%)

Query: 441 WPADWVLAHQREFPER--HLHPLAQIPFAYVQAPAPNDAHAFLDLKLG 486
           WP   V   +R  PER  H+HP+  IPF              L LKLG
Sbjct: 246 WPEPCVFDPERFGPERSRHIHPMTYIPFGAGPHGCIGSRLGVLQLKLG 293


>BT023196-1|AAY55612.1|  337|Drosophila melanogaster IP03149p
           protein.
          Length = 337

 Score = 31.1 bits (67), Expect = 3.7
 Identities = 18/48 (37%), Positives = 21/48 (43%), Gaps = 2/48 (4%)

Query: 441 WPADWVLAHQREFPER--HLHPLAQIPFAYVQAPAPNDAHAFLDLKLG 486
           WP   V   +R  PER  H+HP+  IPF              L LKLG
Sbjct: 246 WPEPCVFDPERFGPERSRHIHPMTYIPFGAGPHGCIGSRLGVLQLKLG 293


>AE013599-1418|AAF58555.1|  501|Drosophila melanogaster CG8457-PA
           protein.
          Length = 501

 Score = 31.1 bits (67), Expect = 3.7
 Identities = 18/48 (37%), Positives = 21/48 (43%), Gaps = 2/48 (4%)

Query: 441 WPADWVLAHQREFPER--HLHPLAQIPFAYVQAPAPNDAHAFLDLKLG 486
           WP   V   +R  PER  H+HP+  IPF              L LKLG
Sbjct: 410 WPEPCVFDPERFGPERSRHIHPMTYIPFGAGPHGCIGSRLGVLQLKLG 457


>X14037-1|CAA32198.1| 1053|Drosophila melanogaster polyprotein
           protein.
          Length = 1053

 Score = 29.9 bits (64), Expect = 8.6
 Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 2/33 (6%)

Query: 136 PLSPFNIETEYTLFVPDSVRVKPRVLHQAVIEA 168
           P+ P ++E  YT FVPD ++  P V  + VI A
Sbjct: 556 PIHPESVE--YTAFVPDGLKNAPSVFQRTVINA 586


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.320    0.137    0.423 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,400,656
Number of Sequences: 52641
Number of extensions: 1122805
Number of successful extensions: 2147
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 2136
Number of HSP's gapped (non-prelim): 14
length of query: 503
length of database: 24,830,863
effective HSP length: 88
effective length of query: 415
effective length of database: 20,198,455
effective search space: 8382358825
effective search space used: 8382358825
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 64 (29.9 bits)