BLASTP 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BGIBMGA001877-TA|BGIBMGA001877-PA|undefined (859 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 10_02_0041 + 4486623-4486855,4487002-4487036,4487132-4487253,448... 205 1e-52 02_05_0965 + 33136373-33136512,33136595-33136688,33136845-331368... 170 5e-42 01_01_0680 + 5217633-5219072 34 0.56 03_03_0247 - 15801705-15802478,15802558-15802728,15802886-15803047 33 1.3 08_01_0893 - 8789491-8791416 31 3.9 07_01_0534 - 3949551-3950350,3950997-3951006 31 3.9 12_02_0896 + 24100015-24100240,24100910-24101277,24102144-241023... 31 5.2 02_02_0494 + 10944354-10944516,10945358-10945496,10946431-10946635 30 6.8 01_04_0003 - 14989160-14989445,14989673-14989807,14991418-149915... 30 6.8 10_01_0038 + 437738-438122,439215-439501,440111-440375,440687-44... 30 9.0 01_02_0045 - 10576475-10577198,10578347-10578504 30 9.0 >10_02_0041 + 4486623-4486855,4487002-4487036,4487132-4487253, 4487496-4487585,4487711-4487830,4487941-4488024, 4488123-4488200,4488349-4488474,4488564-4488653, 4489183-4489218,4489294-4489349,4489569-4489716, 4489797-4490130,4491249-4491384,4491595-4491636, 4491725-4491893,4492471-4492554,4492660-4492755 Length = 692 Score = 205 bits (500), Expect = 1e-52 Identities = 114/299 (38%), Positives = 174/299 (58%), Gaps = 25/299 (8%) Query: 67 PSHGRVVFILVDALRYDFTEYDDKLEKPLPYQNRLPVMQRTLELCPDCVRLFRFIADPPT 126 P+ R+V +++DALR+DF ++ P+ ++L V+QR R+F+ +ADPPT Sbjct: 64 PAVDRLVIVVLDALRFDFVAPSTFFQERQPWMDKLQVLQRLAADEKTSARIFKALADPPT 123 Query: 127 TTLQRVKALVTGSLPTFIDASSNFAAMELQEDNIIDQVVNAGHHAVLLGDDTWSRLMPRR 186 T+LQR+KAL TG LPTFID ++F A + EDNI+ Q G V++GDDTW +L P Sbjct: 124 TSLQRLKALTTGGLPTFIDVGNSFGAPAIVEDNIMHQFAKNGKRVVMMGDDTWIQLYPEH 183 Query: 187 WFRAHTMYSFHTWDLDTVDIEVDSKIYDELKKDDWDLLVAHYLGVDHAGHRYGPNHSEMK 246 + +++ SF+ DLDTVD V + L K+DWD+L+AH+LGVDHAGH +G + + M Sbjct: 184 FNKSYPYPSFNVKDLDTVDNGVIEHLLPSLHKNDWDVLIAHFLGVDHAGHIFGVDSTPMI 243 Query: 247 RKLDETNARIEKIIKIIP---------KDVILYVVGDHGMTESGDHGGESKAERTAAMFA 297 +KL++ N +E +I + ++ +L V+GDHG T +GDHGG + E ++FA Sbjct: 244 QKLEQYNRILEDVIDTLKSLSTSGGPHENTLLLVMGDHGQTLNGDHGGGTAEEVETSLFA 303 Query: 298 YRG----------AGFGGQSPDIQTGREV-----EQTDLAPTMSAAFGRPPPAPSLGNI 341 + G + D+ G+EV +Q D A T++A G P P S+G + Sbjct: 304 WSPKTPPNAVLSVLGKNLCNADLH-GKEVCVSTMQQLDFAVTIAALLGIPFPFGSIGRV 361 Score = 42.3 bits (95), Expect = 0.002 Identities = 19/70 (27%), Positives = 38/70 (54%), Gaps = 2/70 (2%) Query: 764 AVPLLALWGRNGAAAAGPRTQ--MAAVFTLCLKFGLCFAVRVFMSALSATIHCRHLMIWG 821 ++P +A+ N A+ + + + L +GL ++ ++ + TI RHLM+WG Sbjct: 605 SLPFIAICWYNSASKNSKVNDATVTRLIQVLLMYGLITSITTTLTIICVTIQRRHLMVWG 664 Query: 822 VFTPKLLFES 831 +F PK +F++ Sbjct: 665 LFAPKYVFDA 674 >02_05_0965 + 33136373-33136512,33136595-33136688,33136845-33136889, 33137007-33137174,33137247-33137331,33137531-33137637, 33137918-33137998,33138232-33138284,33138361-33138460, 33138911-33139054,33139268-33139364,33139528-33139611, 33139904-33140123,33140204-33140297,33140406-33140975, 33141348-33141449,33141564-33141656,33141834-33141836 Length = 759 Score = 170 bits (413), Expect = 5e-42 Identities = 106/308 (34%), Positives = 162/308 (52%), Gaps = 14/308 (4%) Query: 67 PSHGRVVFILVDALRYDFTEYDDKLEKPLPYQNRLPVMQRTLELCPDCVRL-FRFIADPP 125 P + R+V +++D L +F ++ KP P + + M T L C + A PP Sbjct: 85 PVYDRLVLMVIDGLPAEFVL--GRVGKP-PSKEMVESMPYTQSLLAGCKATGYHAKAAPP 141 Query: 126 TTTLQRVKALVTGSLPTFIDASSNFAAMELQEDNIIDQVVNAGHHAVLLGDDTWSRLMPR 185 T T+ R+KA+V+G++ F+D + NF +DN++DQ+ G+ V+LGD+TW +L P+ Sbjct: 142 TVTMPRLKAMVSGAIGGFLDVAFNFNTQAFLDDNLLDQLHMIGYKLVMLGDETWIKLFPK 201 Query: 186 RWFRAHTMYSFHTWDLDTVDIEVDSKIYDELKKDDWDLLVAHYLGVDHAGHRYGPNHSEM 245 ++R + SF+ D VD V + E DW++L+ HYLG+DH GH G M Sbjct: 202 LFWRQDGVSSFYVKDTVEVDFNVSRHLESEFAAKDWNMLILHYLGLDHVGHIGGRQSVLM 261 Query: 246 KRKLDETNARIEKIIKIIP--KD----VILYVVGDHGMTESGDHGGESKAER-TAAMFAY 298 +KL E + I ++ + +D +L VV DHGMTE G+HGG S E + A+F Sbjct: 262 PQKLKEMDDVIRRVHNAVSGLEDNLDRTLLVVVSDHGMTEGGNHGGSSYEETDSLALFIG 321 Query: 299 RGAGFGGQSPDIQTGREVEQTDLAPTMSAAFGRPPPAPSLGNILFPVLPKMTVAETLLHL 358 SP Q E Q DLAPT+S FG P P ++G +L V +TV + +++ Sbjct: 322 HSVQSSYCSPYDQ--NEALQVDLAPTLSLLFGTPIPKNNIGVVLPEVFNSLTV-DCYVYI 378 Query: 359 TNSLKQVS 366 K VS Sbjct: 379 YTISKDVS 386 >01_01_0680 + 5217633-5219072 Length = 479 Score = 33.9 bits (74), Expect = 0.56 Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 6/76 (7%) Query: 213 YDELKKDDW-DLLVAHYLGVDHAGHRYGPNHSEMKRKLDETNARIEKII-----KIIPKD 266 Y +L D+ L ++ DH GH+ GP+ + + + I ++I + + +D Sbjct: 234 YFDLPSDEMPQFLTLYFEDPDHQGHQVGPDDPAITEAVVRIDEMIGRLIAGLEERGVFED 293 Query: 267 VILYVVGDHGMTESGD 282 V + +VGDHGM + D Sbjct: 294 VNVILVGDHGMVGTCD 309 >03_03_0247 - 15801705-15802478,15802558-15802728,15802886-15803047 Length = 368 Score = 32.7 bits (71), Expect = 1.3 Identities = 22/56 (39%), Positives = 28/56 (50%), Gaps = 1/56 (1%) Query: 283 HGGESKAERTAAMFAYRGAGFGGQSPDIQTGREVEQTDLAPTMSAAFGRPPPAPSL 338 H E+ A TA A+ G G GG+ R + DLA T++AA GR A SL Sbjct: 232 HAEEAIAAATAVRGAHGGGGGGGRGARAAR-RRPRREDLAVTVAAARGRASTAASL 286 >08_01_0893 - 8789491-8791416 Length = 641 Score = 31.1 bits (67), Expect = 3.9 Identities = 45/204 (22%), Positives = 82/204 (40%), Gaps = 16/204 (7%) Query: 144 IDASSNFAAMELQEDNIIDQVVNAGHHAVLLGDDTWSRLMPRRWFRAHTMYSFH-TWDLD 202 + +SS+ AA + I D + AG +++G ++ R++ R +++Y T D Sbjct: 51 LSSSSSAAAAAATLEAIGDDPLAAGSGQLVVGVESQYRVVYRL---VNSIYVLGVTTSSD 107 Query: 203 TVDIEVDSKIYDELKKDDWDLLVAHYLGVDHAGHRYGPNHSEMKRKLDET-----NARIE 257 V + + ++VA GVD + + E+ LD + R+ Sbjct: 108 HASPAVHAFAVADAVNQAVSVVVAACRGVDVTPEKVHRKYPEVYLALDLVLHGVGSVRLS 167 Query: 258 KIIKIIPKDVILYVVGDHGMTESGDHGGES-------KAERTAAMFAYRGAGFGGQSPDI 310 +I+ I D + +V E+ G + +R AA + GA F + Sbjct: 168 QILATIHGDNLARMVNSSPDAEAKARGADPWPAVEHLAHDRHAARDGFTGASFELPQETL 227 Query: 311 QTGREVEQTDLAPTMSAAFGRPPP 334 G E +++AP +AA G PP Sbjct: 228 AAGDEFSASNIAPAAAAATGDEPP 251 >07_01_0534 - 3949551-3950350,3950997-3951006 Length = 269 Score = 31.1 bits (67), Expect = 3.9 Identities = 24/62 (38%), Positives = 27/62 (43%), Gaps = 9/62 (14%) Query: 610 GDCWTSIGVGSTGQASRTALVMALG------SMAAVVAIARRHVGWRGHGVVLAGLFACA 663 G WT VG G TA+ ALG ++AAVVA G HGV GL A Sbjct: 144 GRIWTPAAVGDDGDGVVTAVAAALGQRQLATAVAAVVAAVSSGNGGGRHGV---GLLAVR 200 Query: 664 HW 665 W Sbjct: 201 WW 202 >12_02_0896 + 24100015-24100240,24100910-24101277,24102144-24102380, 24102461-24102754 Length = 374 Score = 30.7 bits (66), Expect = 5.2 Identities = 31/138 (22%), Positives = 57/138 (41%), Gaps = 10/138 (7%) Query: 279 ESGDHGGESKAERTAAMFAYRGAGF----GGQSPD-IQTGREVEQTDLAPTMSAAFGRPP 333 E D G + + Y G GF GG S D I+ + + + ++ + P Sbjct: 53 ELEDQGQVVTSPAATFVGVYDGHGFASEQGGMSTDAIKRAFHATEEEFLHMVKRSWLKQP 112 Query: 334 PAPSLGNILFPVLPKMTVAETLLHLTNSLKQVSQYLVRYGEESQQVSLDRLAHLINATRE 393 S+G+ + + +L++ N L L R G + ++V +RL++ N E Sbjct: 113 QIASVGSCCLVG----AITDNVLYVAN-LGDSRAVLGRRGPDGREVVAERLSNDHNVAEE 167 Query: 394 QIEKAATVKTEDDLSIYV 411 ++ K T + DD I + Sbjct: 168 EVRKELTEQHPDDSRIVI 185 >02_02_0494 + 10944354-10944516,10945358-10945496,10946431-10946635 Length = 168 Score = 30.3 bits (65), Expect = 6.8 Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 1/39 (2%) Query: 249 LDETNARIEKIIKIIPKDVILYVVGDHGMTESGDHGGES 287 LD + +KI+ ++P + + G G+ +SGD GGE+ Sbjct: 29 LDGADGWFQKIVSLMPHRP-MSIAGSRGVKDSGDEGGEN 66 >01_04_0003 - 14989160-14989445,14989673-14989807,14991418-14991508, 14991571-14991712,14991924-14992403,14992610-14993548 Length = 690 Score = 30.3 bits (65), Expect = 6.8 Identities = 26/99 (26%), Positives = 46/99 (46%), Gaps = 11/99 (11%) Query: 456 EGIPI--ERLPNIFASTFVSCGLISMAICVSVCYTVFHFELLEDVHHGVILSTGLISSAL 513 +G+PI E LP A + S I + + Y F+++E +HHG + L Sbjct: 458 KGLPIKEEGLPTKEAQAYFSSMDIHFNYAL-LLYASVRFDIVEGIHHG--------ADHL 508 Query: 514 TCVLVIMHWDGISQRWYEGRSPIYERFSRGALMASAAVL 552 V+VI+H +G + + ++FS+ + SA V+ Sbjct: 509 LPVIVIIHLEGRGFSYATTERDLEKKFSKYGRVTSARVV 547 >10_01_0038 + 437738-438122,439215-439501,440111-440375,440687-440784 Length = 344 Score = 29.9 bits (64), Expect = 9.0 Identities = 14/35 (40%), Positives = 18/35 (51%) Query: 650 RGHGVVLAGLFACAHWALGWGALGSPSRSRQLARG 684 RGH V G++ W LG G+ G S +R RG Sbjct: 213 RGHDTVFDGVYVGRRWRLGGGSDGVLSSARSGGRG 247 >01_02_0045 - 10576475-10577198,10578347-10578504 Length = 293 Score = 29.9 bits (64), Expect = 9.0 Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 3/55 (5%) Query: 281 GDHGGESKAERTAAMFAYRGAGFGGQSPDIQTGREVEQTDLAPTMSAAFGRPPPA 335 G + G ++A AA+ A GAG G Q D +G + DL + SAA GRP P+ Sbjct: 92 GSNSG-ARAGEGAALGA-SGAGSGRQGADPVSGSSAGEQDLGSSGSAA-GRPHPS 143 Database: rice Posted date: Oct 3, 2007 3:31 PM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.324 0.137 0.424 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 24,468,324 Number of Sequences: 37544 Number of extensions: 1035392 Number of successful extensions: 3763 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 4 Number of HSP's successfully gapped in prelim test: 7 Number of HSP's that attempted gapping in prelim test: 3752 Number of HSP's gapped (non-prelim): 13 length of query: 859 length of database: 14,793,348 effective HSP length: 88 effective length of query: 771 effective length of database: 11,489,476 effective search space: 8858385996 effective search space used: 8858385996 T: 11 A: 40 X1: 15 ( 7.0 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 40 (21.6 bits) S2: 64 (29.9 bits)
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