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Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001877-TA|BGIBMGA001877-PA|undefined
         (859 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_02_0041 + 4486623-4486855,4487002-4487036,4487132-4487253,448...   205   1e-52
02_05_0965 + 33136373-33136512,33136595-33136688,33136845-331368...   170   5e-42
01_01_0680 + 5217633-5219072                                           34   0.56 
03_03_0247 - 15801705-15802478,15802558-15802728,15802886-15803047     33   1.3  
08_01_0893 - 8789491-8791416                                           31   3.9  
07_01_0534 - 3949551-3950350,3950997-3951006                           31   3.9  
12_02_0896 + 24100015-24100240,24100910-24101277,24102144-241023...    31   5.2  
02_02_0494 + 10944354-10944516,10945358-10945496,10946431-10946635     30   6.8  
01_04_0003 - 14989160-14989445,14989673-14989807,14991418-149915...    30   6.8  
10_01_0038 + 437738-438122,439215-439501,440111-440375,440687-44...    30   9.0  
01_02_0045 - 10576475-10577198,10578347-10578504                       30   9.0  

>10_02_0041 +
           4486623-4486855,4487002-4487036,4487132-4487253,
           4487496-4487585,4487711-4487830,4487941-4488024,
           4488123-4488200,4488349-4488474,4488564-4488653,
           4489183-4489218,4489294-4489349,4489569-4489716,
           4489797-4490130,4491249-4491384,4491595-4491636,
           4491725-4491893,4492471-4492554,4492660-4492755
          Length = 692

 Score =  205 bits (500), Expect = 1e-52
 Identities = 114/299 (38%), Positives = 174/299 (58%), Gaps = 25/299 (8%)

Query: 67  PSHGRVVFILVDALRYDFTEYDDKLEKPLPYQNRLPVMQRTLELCPDCVRLFRFIADPPT 126
           P+  R+V +++DALR+DF       ++  P+ ++L V+QR         R+F+ +ADPPT
Sbjct: 64  PAVDRLVIVVLDALRFDFVAPSTFFQERQPWMDKLQVLQRLAADEKTSARIFKALADPPT 123

Query: 127 TTLQRVKALVTGSLPTFIDASSNFAAMELQEDNIIDQVVNAGHHAVLLGDDTWSRLMPRR 186
           T+LQR+KAL TG LPTFID  ++F A  + EDNI+ Q    G   V++GDDTW +L P  
Sbjct: 124 TSLQRLKALTTGGLPTFIDVGNSFGAPAIVEDNIMHQFAKNGKRVVMMGDDTWIQLYPEH 183

Query: 187 WFRAHTMYSFHTWDLDTVDIEVDSKIYDELKKDDWDLLVAHYLGVDHAGHRYGPNHSEMK 246
           + +++   SF+  DLDTVD  V   +   L K+DWD+L+AH+LGVDHAGH +G + + M 
Sbjct: 184 FNKSYPYPSFNVKDLDTVDNGVIEHLLPSLHKNDWDVLIAHFLGVDHAGHIFGVDSTPMI 243

Query: 247 RKLDETNARIEKIIKIIP---------KDVILYVVGDHGMTESGDHGGESKAERTAAMFA 297
           +KL++ N  +E +I  +          ++ +L V+GDHG T +GDHGG +  E   ++FA
Sbjct: 244 QKLEQYNRILEDVIDTLKSLSTSGGPHENTLLLVMGDHGQTLNGDHGGGTAEEVETSLFA 303

Query: 298 YRG----------AGFGGQSPDIQTGREV-----EQTDLAPTMSAAFGRPPPAPSLGNI 341
           +             G    + D+  G+EV     +Q D A T++A  G P P  S+G +
Sbjct: 304 WSPKTPPNAVLSVLGKNLCNADLH-GKEVCVSTMQQLDFAVTIAALLGIPFPFGSIGRV 361



 Score = 42.3 bits (95), Expect = 0.002
 Identities = 19/70 (27%), Positives = 38/70 (54%), Gaps = 2/70 (2%)

Query: 764 AVPLLALWGRNGAAAAGPRTQ--MAAVFTLCLKFGLCFAVRVFMSALSATIHCRHLMIWG 821
           ++P +A+   N A+         +  +  + L +GL  ++   ++ +  TI  RHLM+WG
Sbjct: 605 SLPFIAICWYNSASKNSKVNDATVTRLIQVLLMYGLITSITTTLTIICVTIQRRHLMVWG 664

Query: 822 VFTPKLLFES 831
           +F PK +F++
Sbjct: 665 LFAPKYVFDA 674


>02_05_0965 +
           33136373-33136512,33136595-33136688,33136845-33136889,
           33137007-33137174,33137247-33137331,33137531-33137637,
           33137918-33137998,33138232-33138284,33138361-33138460,
           33138911-33139054,33139268-33139364,33139528-33139611,
           33139904-33140123,33140204-33140297,33140406-33140975,
           33141348-33141449,33141564-33141656,33141834-33141836
          Length = 759

 Score =  170 bits (413), Expect = 5e-42
 Identities = 106/308 (34%), Positives = 162/308 (52%), Gaps = 14/308 (4%)

Query: 67  PSHGRVVFILVDALRYDFTEYDDKLEKPLPYQNRLPVMQRTLELCPDCVRL-FRFIADPP 125
           P + R+V +++D L  +F     ++ KP P +  +  M  T  L   C    +   A PP
Sbjct: 85  PVYDRLVLMVIDGLPAEFVL--GRVGKP-PSKEMVESMPYTQSLLAGCKATGYHAKAAPP 141

Query: 126 TTTLQRVKALVTGSLPTFIDASSNFAAMELQEDNIIDQVVNAGHHAVLLGDDTWSRLMPR 185
           T T+ R+KA+V+G++  F+D + NF      +DN++DQ+   G+  V+LGD+TW +L P+
Sbjct: 142 TVTMPRLKAMVSGAIGGFLDVAFNFNTQAFLDDNLLDQLHMIGYKLVMLGDETWIKLFPK 201

Query: 186 RWFRAHTMYSFHTWDLDTVDIEVDSKIYDELKKDDWDLLVAHYLGVDHAGHRYGPNHSEM 245
            ++R   + SF+  D   VD  V   +  E    DW++L+ HYLG+DH GH  G     M
Sbjct: 202 LFWRQDGVSSFYVKDTVEVDFNVSRHLESEFAAKDWNMLILHYLGLDHVGHIGGRQSVLM 261

Query: 246 KRKLDETNARIEKIIKIIP--KD----VILYVVGDHGMTESGDHGGESKAER-TAAMFAY 298
            +KL E +  I ++   +   +D     +L VV DHGMTE G+HGG S  E  + A+F  
Sbjct: 262 PQKLKEMDDVIRRVHNAVSGLEDNLDRTLLVVVSDHGMTEGGNHGGSSYEETDSLALFIG 321

Query: 299 RGAGFGGQSPDIQTGREVEQTDLAPTMSAAFGRPPPAPSLGNILFPVLPKMTVAETLLHL 358
                   SP  Q   E  Q DLAPT+S  FG P P  ++G +L  V   +TV +  +++
Sbjct: 322 HSVQSSYCSPYDQ--NEALQVDLAPTLSLLFGTPIPKNNIGVVLPEVFNSLTV-DCYVYI 378

Query: 359 TNSLKQVS 366
               K VS
Sbjct: 379 YTISKDVS 386


>01_01_0680 + 5217633-5219072
          Length = 479

 Score = 33.9 bits (74), Expect = 0.56
 Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 6/76 (7%)

Query: 213 YDELKKDDW-DLLVAHYLGVDHAGHRYGPNHSEMKRKLDETNARIEKII-----KIIPKD 266
           Y +L  D+    L  ++   DH GH+ GP+   +   +   +  I ++I     + + +D
Sbjct: 234 YFDLPSDEMPQFLTLYFEDPDHQGHQVGPDDPAITEAVVRIDEMIGRLIAGLEERGVFED 293

Query: 267 VILYVVGDHGMTESGD 282
           V + +VGDHGM  + D
Sbjct: 294 VNVILVGDHGMVGTCD 309


>03_03_0247 - 15801705-15802478,15802558-15802728,15802886-15803047
          Length = 368

 Score = 32.7 bits (71), Expect = 1.3
 Identities = 22/56 (39%), Positives = 28/56 (50%), Gaps = 1/56 (1%)

Query: 283 HGGESKAERTAAMFAYRGAGFGGQSPDIQTGREVEQTDLAPTMSAAFGRPPPAPSL 338
           H  E+ A  TA   A+ G G GG+       R   + DLA T++AA GR   A SL
Sbjct: 232 HAEEAIAAATAVRGAHGGGGGGGRGARAAR-RRPRREDLAVTVAAARGRASTAASL 286


>08_01_0893 - 8789491-8791416
          Length = 641

 Score = 31.1 bits (67), Expect = 3.9
 Identities = 45/204 (22%), Positives = 82/204 (40%), Gaps = 16/204 (7%)

Query: 144 IDASSNFAAMELQEDNIIDQVVNAGHHAVLLGDDTWSRLMPRRWFRAHTMYSFH-TWDLD 202
           + +SS+ AA     + I D  + AG   +++G ++  R++ R     +++Y    T   D
Sbjct: 51  LSSSSSAAAAAATLEAIGDDPLAAGSGQLVVGVESQYRVVYRL---VNSIYVLGVTTSSD 107

Query: 203 TVDIEVDSKIYDELKKDDWDLLVAHYLGVDHAGHRYGPNHSEMKRKLDET-----NARIE 257
                V +    +       ++VA   GVD    +    + E+   LD       + R+ 
Sbjct: 108 HASPAVHAFAVADAVNQAVSVVVAACRGVDVTPEKVHRKYPEVYLALDLVLHGVGSVRLS 167

Query: 258 KIIKIIPKDVILYVVGDHGMTESGDHGGES-------KAERTAAMFAYRGAGFGGQSPDI 310
           +I+  I  D +  +V      E+   G +          +R AA   + GA F      +
Sbjct: 168 QILATIHGDNLARMVNSSPDAEAKARGADPWPAVEHLAHDRHAARDGFTGASFELPQETL 227

Query: 311 QTGREVEQTDLAPTMSAAFGRPPP 334
             G E   +++AP  +AA G  PP
Sbjct: 228 AAGDEFSASNIAPAAAAATGDEPP 251


>07_01_0534 - 3949551-3950350,3950997-3951006
          Length = 269

 Score = 31.1 bits (67), Expect = 3.9
 Identities = 24/62 (38%), Positives = 27/62 (43%), Gaps = 9/62 (14%)

Query: 610 GDCWTSIGVGSTGQASRTALVMALG------SMAAVVAIARRHVGWRGHGVVLAGLFACA 663
           G  WT   VG  G    TA+  ALG      ++AAVVA      G   HGV   GL A  
Sbjct: 144 GRIWTPAAVGDDGDGVVTAVAAALGQRQLATAVAAVVAAVSSGNGGGRHGV---GLLAVR 200

Query: 664 HW 665
            W
Sbjct: 201 WW 202


>12_02_0896 +
           24100015-24100240,24100910-24101277,24102144-24102380,
           24102461-24102754
          Length = 374

 Score = 30.7 bits (66), Expect = 5.2
 Identities = 31/138 (22%), Positives = 57/138 (41%), Gaps = 10/138 (7%)

Query: 279 ESGDHGGESKAERTAAMFAYRGAGF----GGQSPD-IQTGREVEQTDLAPTMSAAFGRPP 333
           E  D G    +     +  Y G GF    GG S D I+      + +    +  ++ + P
Sbjct: 53  ELEDQGQVVTSPAATFVGVYDGHGFASEQGGMSTDAIKRAFHATEEEFLHMVKRSWLKQP 112

Query: 334 PAPSLGNILFPVLPKMTVAETLLHLTNSLKQVSQYLVRYGEESQQVSLDRLAHLINATRE 393
              S+G+          + + +L++ N L      L R G + ++V  +RL++  N   E
Sbjct: 113 QIASVGSCCLVG----AITDNVLYVAN-LGDSRAVLGRRGPDGREVVAERLSNDHNVAEE 167

Query: 394 QIEKAATVKTEDDLSIYV 411
           ++ K  T +  DD  I +
Sbjct: 168 EVRKELTEQHPDDSRIVI 185


>02_02_0494 + 10944354-10944516,10945358-10945496,10946431-10946635
          Length = 168

 Score = 30.3 bits (65), Expect = 6.8
 Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 1/39 (2%)

Query: 249 LDETNARIEKIIKIIPKDVILYVVGDHGMTESGDHGGES 287
           LD  +   +KI+ ++P    + + G  G+ +SGD GGE+
Sbjct: 29  LDGADGWFQKIVSLMPHRP-MSIAGSRGVKDSGDEGGEN 66


>01_04_0003 -
           14989160-14989445,14989673-14989807,14991418-14991508,
           14991571-14991712,14991924-14992403,14992610-14993548
          Length = 690

 Score = 30.3 bits (65), Expect = 6.8
 Identities = 26/99 (26%), Positives = 46/99 (46%), Gaps = 11/99 (11%)

Query: 456 EGIPI--ERLPNIFASTFVSCGLISMAICVSVCYTVFHFELLEDVHHGVILSTGLISSAL 513
           +G+PI  E LP   A  + S   I     + + Y    F+++E +HHG        +  L
Sbjct: 458 KGLPIKEEGLPTKEAQAYFSSMDIHFNYAL-LLYASVRFDIVEGIHHG--------ADHL 508

Query: 514 TCVLVIMHWDGISQRWYEGRSPIYERFSRGALMASAAVL 552
             V+VI+H +G    +      + ++FS+   + SA V+
Sbjct: 509 LPVIVIIHLEGRGFSYATTERDLEKKFSKYGRVTSARVV 547


>10_01_0038 +
           437738-438122,439215-439501,440111-440375,440687-440784
          Length = 344

 Score = 29.9 bits (64), Expect = 9.0
 Identities = 14/35 (40%), Positives = 18/35 (51%)

Query: 650 RGHGVVLAGLFACAHWALGWGALGSPSRSRQLARG 684
           RGH  V  G++    W LG G+ G  S +R   RG
Sbjct: 213 RGHDTVFDGVYVGRRWRLGGGSDGVLSSARSGGRG 247


>01_02_0045 - 10576475-10577198,10578347-10578504
          Length = 293

 Score = 29.9 bits (64), Expect = 9.0
 Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 3/55 (5%)

Query: 281 GDHGGESKAERTAAMFAYRGAGFGGQSPDIQTGREVEQTDLAPTMSAAFGRPPPA 335
           G + G ++A   AA+ A  GAG G Q  D  +G    + DL  + SAA GRP P+
Sbjct: 92  GSNSG-ARAGEGAALGA-SGAGSGRQGADPVSGSSAGEQDLGSSGSAA-GRPHPS 143


  Database: rice
    Posted date:  Oct 3, 2007  3:31 PM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.324    0.137    0.424 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,468,324
Number of Sequences: 37544
Number of extensions: 1035392
Number of successful extensions: 3763
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 3752
Number of HSP's gapped (non-prelim): 13
length of query: 859
length of database: 14,793,348
effective HSP length: 88
effective length of query: 771
effective length of database: 11,489,476
effective search space: 8858385996
effective search space used: 8858385996
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 64 (29.9 bits)

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