Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001877-TA|BGIBMGA001877-PA|undefined
(859 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC27B12.06 |gpi13||pig-O |Schizosaccharomyces pombe|chr 2|||Ma... 202 1e-52
SPAC13G6.03 |gpi7||GPI anchor biosynthesis protein Gpi7 |Schizos... 128 2e-30
SPBC839.08c |its8||pig-N |Schizosaccharomyces pombe|chr 2|||Manual 44 1e-04
SPBC725.05c |||nucleotide pyrophosphatase |Schizosaccharomyces p... 38 0.004
SPAC1B3.16c |vht1||vitamin H transporter Vth1|Schizosaccharomyce... 30 1.2
SPAC1B3.15c |||membrane transporter|Schizosaccharomyces pombe|ch... 29 2.1
SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyce... 29 3.6
SPAC13G6.01c |rad8|SPAC5H10.14c|ubiquitin-protein ligase E3 |Sch... 28 6.3
SPAC589.12 ||SPAC688.01|glycosylceramide biosynthesis protein |S... 28 6.3
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 27 8.3
>SPBC27B12.06 |gpi13||pig-O |Schizosaccharomyces pombe|chr
2|||Manual
Length = 918
Score = 202 bits (494), Expect = 1e-52
Identities = 109/275 (39%), Positives = 155/275 (56%), Gaps = 7/275 (2%)
Query: 71 RVVFILVDALRYDFT-EYDDKLEKPLPYQNRLPVMQRTLELCPDCVRLFRFIADPPTTTL 129
R V +++DALRYDF Y+D Y N T L P+ L +FIAD PTTT
Sbjct: 83 RAVIVIIDALRYDFLIPYNDSNY----YHNAFTTPYETSVLHPENSYLTQFIADAPTTTS 138
Query: 130 QRVKALVTGSLPTFIDASSNFAAMELQEDNIIDQVVNAGHHAVLLGDDTWSRLMPRRWFR 189
QR+K L TGSLPTFID SNFA + EDN++ Q + VLLGDDTW L
Sbjct: 139 QRLKGLTTGSLPTFIDLGSNFAGTNIDEDNLLLQWKSLDKQIVLLGDDTWDVLFHDYLNE 198
Query: 190 --AHTMYSFHTWDLDTVDIEVDSKIYDELKKDDWDLLVAHYLGVDHAGHRYGPNHSEMKR 247
+ +SF+ DL VD +V+ ++D +K ++D+L+AHYLGVDH GHR GP+H M+
Sbjct: 199 TLSQPAFSFNVPDLHGVDNKVNQYVFDYIKDANFDVLIAHYLGVDHVGHRLGPDHPTMRD 258
Query: 248 KLDETNARIEKIIKIIPKDVILYVVGDHGMTESGDHGGESKAERTAAMFAYRGAGFGGQS 307
KL++ + +++++ ++ +L V+GDHGM G+HGG+S E + ++ Y G
Sbjct: 259 KLNQMDRCVKEMMDLLDDSTLLIVMGDHGMDNKGNHGGDSFDEINSVLWMYSKKPTFGYL 318
Query: 308 PDIQTGREVEQTDLAPTMSAAFGRPPPAPSLGNIL 342
Q DL PT+S G P P +LG ++
Sbjct: 319 KQPGKVLSANQVDLVPTLSLLLGNPIPYGNLGTLI 353
Score = 32.3 bits (70), Expect = 0.29
Identities = 15/44 (34%), Positives = 26/44 (59%)
Query: 597 VISRSYRGCREEQGDCWTSIGVGSTGQASRTALVMALGSMAAVV 640
VIS CREEQG S + + + RT +V+AL ++++++
Sbjct: 586 VISSYVTNCREEQGAFCVSTYISTPDNSLRTLIVLALMALSSII 629
>SPAC13G6.03 |gpi7||GPI anchor biosynthesis protein Gpi7
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 758
Score = 128 bits (310), Expect = 2e-30
Identities = 94/299 (31%), Positives = 132/299 (44%), Gaps = 34/299 (11%)
Query: 71 RVVFILVDALRYDFTEYDDKLEKPLPYQNRLPVMQRTLELCPDCVRLFRFIADPPTTTLQ 130
+VVF++VDALR DF + +P Q L + F A PT T+
Sbjct: 47 QVVFVMVDALRADFV---------FSKSHNMPFTQSLLYNSTHGIGFSAF-ARSPTVTMP 96
Query: 131 RVKALVTGSLPTFIDASSNFAAMEL-----QEDNIIDQVVNAGHHAVLLGDDTWSRLMPR 185
R+KAL TG++P F+D N A + +D+ + Q+ + GDDTW +L P
Sbjct: 97 RLKALTTGTIPGFLDVLLNIAESDTGSSIEAQDSWVYQLNSFNKKIEFYGDDTWLKLFPS 156
Query: 186 RWFRAHTMYSFHTWDLDTVDIEVDSKIYDELKKD---DWDLLVAHYLGVDHAGHRYGPNH 242
+ + SF D VD V L WD L+ HYLGVDH GH YGP+
Sbjct: 157 AFSKFEGTTSFFVSDYTEVDNNVTRNFDHALPSSLSHSWDALILHYLGVDHIGHLYGPSS 216
Query: 243 SEMKRKLDETNARIEKIIKIIPK-------DVILYVVGDHGMTESGDHGGESKAERTAAM 295
+ KL E + I +I K + + ++ + GDHGM E G+HGG S E TAA+
Sbjct: 217 PLLNIKLLEIDTIISRIYKYLQEYDEKTNTHSLIVLCGDHGMNEVGNHGGSSSGETTAAL 276
Query: 296 FAYRGAG---------FGGQSPDIQTGREVEQTDLAPTMSAAFGRPPPAPSLGNILFPV 345
+ VEQ D+ PT+ G P P ++G +L PV
Sbjct: 277 SLLFPSNELSHINKPILNMDDNPYSILERVEQVDVVPTICLLLGIPIPKGNMGKVLSPV 335
Score = 31.9 bits (69), Expect = 0.39
Identities = 14/53 (26%), Positives = 27/53 (50%)
Query: 795 FGLCFAVRVFMSALSATIHCRHLMIWGVFTPKLLFESGACAAALLGTVVGATL 847
F + ++ + +S I HL +W VF+PKLL+ + + L + +T+
Sbjct: 701 FWIMSSISLTFLCISCFIMRHHLFVWSVFSPKLLYNASWASMYFLAKCLISTI 753
>SPBC839.08c |its8||pig-N |Schizosaccharomyces pombe|chr 2|||Manual
Length = 935
Score = 43.6 bits (98), Expect = 1e-04
Identities = 43/190 (22%), Positives = 78/190 (41%), Gaps = 23/190 (12%)
Query: 209 DSKIYDELKKDDWDLLVAHYLGVDHAGHRYGPNHSEMKRKLDETNARIEKIIKIIPK--- 265
D +++D L +D + H LG+D GH P+ E + + +I++++ +
Sbjct: 198 DKELWDMLHRDKI-VFFLHLLGIDTIGHNKHPDSVEYVENIQYIDGKIQELVDKMNNYYN 256
Query: 266 --DVILYV-VGDHGMTESGDHGGESKAERTAAMFAYRGAGFGGQSPDIQTGR-------- 314
+V DHGM++ G H G+ + T GAG + + G
Sbjct: 257 NDGASSWVFTADHGMSDFGSH-GDGNLDNTRTPIIAWGAGIQSPTHEKNYGHDEYSLPWN 315
Query: 315 -------EVEQTDLAPTMSAAFGRPPPAPSLGNILFPVLPKMTVAETLLHLTNSLKQVSQ 367
+++Q D+A MS G P S+G I L + + + L N+L+ Q
Sbjct: 316 LTEIKRIDIQQADIAALMSYLVGLNFPVNSVGQIPLDYLDCSSRRKAEVALMNALEIGEQ 375
Query: 368 YLVRYGEESQ 377
Y ++ + Q
Sbjct: 376 YNLKSASKDQ 385
>SPBC725.05c |||nucleotide pyrophosphatase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 485
Score = 38.3 bits (85), Expect = 0.004
Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 8/93 (8%)
Query: 199 WDLDTVDIEVDSKIYDELKKDDWD---LLVAHYLGVDHAGHRYGPNHSEMKRKLDETNAR 255
++ DT E +I + L D D LL+A+ VD GH +GP+ E+ + E +
Sbjct: 204 FNFDTTLREKKDRILEWLDLPDKDRPQLLLAYAPHVDMVGHAFGPDSPELNIIIQEVDIV 263
Query: 256 IEKII-----KIIPKDVILYVVGDHGMTESGDH 283
I ++I + I K V + + DHGM + D+
Sbjct: 264 IGELIEGLKKRNIDKHVNIIFLSDHGMAPTSDN 296
>SPAC1B3.16c |vht1||vitamin H transporter Vth1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 568
Score = 30.3 bits (65), Expect = 1.2
Identities = 19/64 (29%), Positives = 27/64 (42%), Gaps = 5/64 (7%)
Query: 588 LWVGFGATLVISRSYRGCREEQGDCWTSIGVGSTGQASRTALVMALGSMAAVVAIARRHV 647
L +GFG + C + +GV AS ALV LG++ +VV +
Sbjct: 442 LMIGFGLGPTVPICMAWCSASMAKTYGDVGV-----ASSLALVTGLGNLGSVVTTYALYS 496
Query: 648 GWRG 651
GW G
Sbjct: 497 GWPG 500
>SPAC1B3.15c |||membrane transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 628
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/32 (37%), Positives = 20/32 (62%)
Query: 619 GSTGQASRTALVMALGSMAAVVAIARRHVGWR 650
G G A+ A+V LG++ +VVA + + GW+
Sbjct: 540 GDVGVAAGLAIVSGLGNLGSVVATSALYSGWK 571
>SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 427
Score = 28.7 bits (61), Expect = 3.6
Identities = 27/98 (27%), Positives = 37/98 (37%), Gaps = 6/98 (6%)
Query: 58 VTGSPLICAPSHGRVVFILVDALRYDFTEYDDKLEKPLPYQNRLPVMQRTLELCPDCVRL 117
V GS + P GR V V +L D E D L+ R + + +CPD V+
Sbjct: 201 VIGSSIKTMPLAGRDVTYFVQSLLRDRNEPDSSLKTA----ER--IKEECCYVCPDIVKE 254
Query: 118 FRFIADPPTTTLQRVKALVTGSLPTFIDASSNFAAMEL 155
F P L+ +TG T F A E+
Sbjct: 255 FSRFDREPDRYLKYASESITGHSTTIDVGFERFLAPEI 292
>SPAC13G6.01c |rad8|SPAC5H10.14c|ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1133
Score = 27.9 bits (59), Expect = 6.3
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 6/43 (13%)
Query: 22 TECQHLETFDCSGRERGNSSIEESCTLDEKIKQILSVTGSPLI 64
T QH E + +G+E G+S + ES LD LSVTG I
Sbjct: 47 TNSQH-ENANAAGKEYGDSGVSESWVLD-----FLSVTGEKTI 83
>SPAC589.12 ||SPAC688.01|glycosylceramide biosynthesis protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 971
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/28 (42%), Positives = 17/28 (60%)
Query: 190 AHTMYSFHTWDLDTVDIEVDSKIYDELK 217
A+T+Y+F W L DI DS +Y + K
Sbjct: 191 AYTVYAFFEWSLILWDILFDSALYWDFK 218
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 27.5 bits (58), Expect = 8.3
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 4/62 (6%)
Query: 275 HGMTESGDHGGESKAERTAAMFAYRGAGFGGQSP--DIQTGREVEQTDLAPTMSAAFGRP 332
HG E D + ++ + AA A + FGG +P + T Q+ P MSA P
Sbjct: 1652 HGDEEEEDSEDDIRSSKDAAALAAKL--FGGMAPAHPVSTPPVRPQSAAPPQMSAPTPPP 1709
Query: 333 PP 334
PP
Sbjct: 1710 PP 1711
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.324 0.137 0.424
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,581,228
Number of Sequences: 5004
Number of extensions: 143237
Number of successful extensions: 498
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 471
Number of HSP's gapped (non-prelim): 21
length of query: 859
length of database: 2,362,478
effective HSP length: 79
effective length of query: 780
effective length of database: 1,967,162
effective search space: 1534386360
effective search space used: 1534386360
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 58 (27.5 bits)
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