Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001877-TA|BGIBMGA001877-PA|undefined
(859 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_02_0041 + 4486623-4486855,4487002-4487036,4487132-4487253,448... 205 1e-52
02_05_0965 + 33136373-33136512,33136595-33136688,33136845-331368... 170 5e-42
01_01_0680 + 5217633-5219072 34 0.56
03_03_0247 - 15801705-15802478,15802558-15802728,15802886-15803047 33 1.3
08_01_0893 - 8789491-8791416 31 3.9
07_01_0534 - 3949551-3950350,3950997-3951006 31 3.9
12_02_0896 + 24100015-24100240,24100910-24101277,24102144-241023... 31 5.2
02_02_0494 + 10944354-10944516,10945358-10945496,10946431-10946635 30 6.8
01_04_0003 - 14989160-14989445,14989673-14989807,14991418-149915... 30 6.8
10_01_0038 + 437738-438122,439215-439501,440111-440375,440687-44... 30 9.0
01_02_0045 - 10576475-10577198,10578347-10578504 30 9.0
>10_02_0041 +
4486623-4486855,4487002-4487036,4487132-4487253,
4487496-4487585,4487711-4487830,4487941-4488024,
4488123-4488200,4488349-4488474,4488564-4488653,
4489183-4489218,4489294-4489349,4489569-4489716,
4489797-4490130,4491249-4491384,4491595-4491636,
4491725-4491893,4492471-4492554,4492660-4492755
Length = 692
Score = 205 bits (500), Expect = 1e-52
Identities = 114/299 (38%), Positives = 174/299 (58%), Gaps = 25/299 (8%)
Query: 67 PSHGRVVFILVDALRYDFTEYDDKLEKPLPYQNRLPVMQRTLELCPDCVRLFRFIADPPT 126
P+ R+V +++DALR+DF ++ P+ ++L V+QR R+F+ +ADPPT
Sbjct: 64 PAVDRLVIVVLDALRFDFVAPSTFFQERQPWMDKLQVLQRLAADEKTSARIFKALADPPT 123
Query: 127 TTLQRVKALVTGSLPTFIDASSNFAAMELQEDNIIDQVVNAGHHAVLLGDDTWSRLMPRR 186
T+LQR+KAL TG LPTFID ++F A + EDNI+ Q G V++GDDTW +L P
Sbjct: 124 TSLQRLKALTTGGLPTFIDVGNSFGAPAIVEDNIMHQFAKNGKRVVMMGDDTWIQLYPEH 183
Query: 187 WFRAHTMYSFHTWDLDTVDIEVDSKIYDELKKDDWDLLVAHYLGVDHAGHRYGPNHSEMK 246
+ +++ SF+ DLDTVD V + L K+DWD+L+AH+LGVDHAGH +G + + M
Sbjct: 184 FNKSYPYPSFNVKDLDTVDNGVIEHLLPSLHKNDWDVLIAHFLGVDHAGHIFGVDSTPMI 243
Query: 247 RKLDETNARIEKIIKIIP---------KDVILYVVGDHGMTESGDHGGESKAERTAAMFA 297
+KL++ N +E +I + ++ +L V+GDHG T +GDHGG + E ++FA
Sbjct: 244 QKLEQYNRILEDVIDTLKSLSTSGGPHENTLLLVMGDHGQTLNGDHGGGTAEEVETSLFA 303
Query: 298 YRG----------AGFGGQSPDIQTGREV-----EQTDLAPTMSAAFGRPPPAPSLGNI 341
+ G + D+ G+EV +Q D A T++A G P P S+G +
Sbjct: 304 WSPKTPPNAVLSVLGKNLCNADLH-GKEVCVSTMQQLDFAVTIAALLGIPFPFGSIGRV 361
Score = 42.3 bits (95), Expect = 0.002
Identities = 19/70 (27%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 764 AVPLLALWGRNGAAAAGPRTQ--MAAVFTLCLKFGLCFAVRVFMSALSATIHCRHLMIWG 821
++P +A+ N A+ + + + L +GL ++ ++ + TI RHLM+WG
Sbjct: 605 SLPFIAICWYNSASKNSKVNDATVTRLIQVLLMYGLITSITTTLTIICVTIQRRHLMVWG 664
Query: 822 VFTPKLLFES 831
+F PK +F++
Sbjct: 665 LFAPKYVFDA 674
>02_05_0965 +
33136373-33136512,33136595-33136688,33136845-33136889,
33137007-33137174,33137247-33137331,33137531-33137637,
33137918-33137998,33138232-33138284,33138361-33138460,
33138911-33139054,33139268-33139364,33139528-33139611,
33139904-33140123,33140204-33140297,33140406-33140975,
33141348-33141449,33141564-33141656,33141834-33141836
Length = 759
Score = 170 bits (413), Expect = 5e-42
Identities = 106/308 (34%), Positives = 162/308 (52%), Gaps = 14/308 (4%)
Query: 67 PSHGRVVFILVDALRYDFTEYDDKLEKPLPYQNRLPVMQRTLELCPDCVRL-FRFIADPP 125
P + R+V +++D L +F ++ KP P + + M T L C + A PP
Sbjct: 85 PVYDRLVLMVIDGLPAEFVL--GRVGKP-PSKEMVESMPYTQSLLAGCKATGYHAKAAPP 141
Query: 126 TTTLQRVKALVTGSLPTFIDASSNFAAMELQEDNIIDQVVNAGHHAVLLGDDTWSRLMPR 185
T T+ R+KA+V+G++ F+D + NF +DN++DQ+ G+ V+LGD+TW +L P+
Sbjct: 142 TVTMPRLKAMVSGAIGGFLDVAFNFNTQAFLDDNLLDQLHMIGYKLVMLGDETWIKLFPK 201
Query: 186 RWFRAHTMYSFHTWDLDTVDIEVDSKIYDELKKDDWDLLVAHYLGVDHAGHRYGPNHSEM 245
++R + SF+ D VD V + E DW++L+ HYLG+DH GH G M
Sbjct: 202 LFWRQDGVSSFYVKDTVEVDFNVSRHLESEFAAKDWNMLILHYLGLDHVGHIGGRQSVLM 261
Query: 246 KRKLDETNARIEKIIKIIP--KD----VILYVVGDHGMTESGDHGGESKAER-TAAMFAY 298
+KL E + I ++ + +D +L VV DHGMTE G+HGG S E + A+F
Sbjct: 262 PQKLKEMDDVIRRVHNAVSGLEDNLDRTLLVVVSDHGMTEGGNHGGSSYEETDSLALFIG 321
Query: 299 RGAGFGGQSPDIQTGREVEQTDLAPTMSAAFGRPPPAPSLGNILFPVLPKMTVAETLLHL 358
SP Q E Q DLAPT+S FG P P ++G +L V +TV + +++
Sbjct: 322 HSVQSSYCSPYDQ--NEALQVDLAPTLSLLFGTPIPKNNIGVVLPEVFNSLTV-DCYVYI 378
Query: 359 TNSLKQVS 366
K VS
Sbjct: 379 YTISKDVS 386
>01_01_0680 + 5217633-5219072
Length = 479
Score = 33.9 bits (74), Expect = 0.56
Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 6/76 (7%)
Query: 213 YDELKKDDW-DLLVAHYLGVDHAGHRYGPNHSEMKRKLDETNARIEKII-----KIIPKD 266
Y +L D+ L ++ DH GH+ GP+ + + + I ++I + + +D
Sbjct: 234 YFDLPSDEMPQFLTLYFEDPDHQGHQVGPDDPAITEAVVRIDEMIGRLIAGLEERGVFED 293
Query: 267 VILYVVGDHGMTESGD 282
V + +VGDHGM + D
Sbjct: 294 VNVILVGDHGMVGTCD 309
>03_03_0247 - 15801705-15802478,15802558-15802728,15802886-15803047
Length = 368
Score = 32.7 bits (71), Expect = 1.3
Identities = 22/56 (39%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 283 HGGESKAERTAAMFAYRGAGFGGQSPDIQTGREVEQTDLAPTMSAAFGRPPPAPSL 338
H E+ A TA A+ G G GG+ R + DLA T++AA GR A SL
Sbjct: 232 HAEEAIAAATAVRGAHGGGGGGGRGARAAR-RRPRREDLAVTVAAARGRASTAASL 286
>08_01_0893 - 8789491-8791416
Length = 641
Score = 31.1 bits (67), Expect = 3.9
Identities = 45/204 (22%), Positives = 82/204 (40%), Gaps = 16/204 (7%)
Query: 144 IDASSNFAAMELQEDNIIDQVVNAGHHAVLLGDDTWSRLMPRRWFRAHTMYSFH-TWDLD 202
+ +SS+ AA + I D + AG +++G ++ R++ R +++Y T D
Sbjct: 51 LSSSSSAAAAAATLEAIGDDPLAAGSGQLVVGVESQYRVVYRL---VNSIYVLGVTTSSD 107
Query: 203 TVDIEVDSKIYDELKKDDWDLLVAHYLGVDHAGHRYGPNHSEMKRKLDET-----NARIE 257
V + + ++VA GVD + + E+ LD + R+
Sbjct: 108 HASPAVHAFAVADAVNQAVSVVVAACRGVDVTPEKVHRKYPEVYLALDLVLHGVGSVRLS 167
Query: 258 KIIKIIPKDVILYVVGDHGMTESGDHGGES-------KAERTAAMFAYRGAGFGGQSPDI 310
+I+ I D + +V E+ G + +R AA + GA F +
Sbjct: 168 QILATIHGDNLARMVNSSPDAEAKARGADPWPAVEHLAHDRHAARDGFTGASFELPQETL 227
Query: 311 QTGREVEQTDLAPTMSAAFGRPPP 334
G E +++AP +AA G PP
Sbjct: 228 AAGDEFSASNIAPAAAAATGDEPP 251
>07_01_0534 - 3949551-3950350,3950997-3951006
Length = 269
Score = 31.1 bits (67), Expect = 3.9
Identities = 24/62 (38%), Positives = 27/62 (43%), Gaps = 9/62 (14%)
Query: 610 GDCWTSIGVGSTGQASRTALVMALG------SMAAVVAIARRHVGWRGHGVVLAGLFACA 663
G WT VG G TA+ ALG ++AAVVA G HGV GL A
Sbjct: 144 GRIWTPAAVGDDGDGVVTAVAAALGQRQLATAVAAVVAAVSSGNGGGRHGV---GLLAVR 200
Query: 664 HW 665
W
Sbjct: 201 WW 202
>12_02_0896 +
24100015-24100240,24100910-24101277,24102144-24102380,
24102461-24102754
Length = 374
Score = 30.7 bits (66), Expect = 5.2
Identities = 31/138 (22%), Positives = 57/138 (41%), Gaps = 10/138 (7%)
Query: 279 ESGDHGGESKAERTAAMFAYRGAGF----GGQSPD-IQTGREVEQTDLAPTMSAAFGRPP 333
E D G + + Y G GF GG S D I+ + + + ++ + P
Sbjct: 53 ELEDQGQVVTSPAATFVGVYDGHGFASEQGGMSTDAIKRAFHATEEEFLHMVKRSWLKQP 112
Query: 334 PAPSLGNILFPVLPKMTVAETLLHLTNSLKQVSQYLVRYGEESQQVSLDRLAHLINATRE 393
S+G+ + + +L++ N L L R G + ++V +RL++ N E
Sbjct: 113 QIASVGSCCLVG----AITDNVLYVAN-LGDSRAVLGRRGPDGREVVAERLSNDHNVAEE 167
Query: 394 QIEKAATVKTEDDLSIYV 411
++ K T + DD I +
Sbjct: 168 EVRKELTEQHPDDSRIVI 185
>02_02_0494 + 10944354-10944516,10945358-10945496,10946431-10946635
Length = 168
Score = 30.3 bits (65), Expect = 6.8
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 249 LDETNARIEKIIKIIPKDVILYVVGDHGMTESGDHGGES 287
LD + +KI+ ++P + + G G+ +SGD GGE+
Sbjct: 29 LDGADGWFQKIVSLMPHRP-MSIAGSRGVKDSGDEGGEN 66
>01_04_0003 -
14989160-14989445,14989673-14989807,14991418-14991508,
14991571-14991712,14991924-14992403,14992610-14993548
Length = 690
Score = 30.3 bits (65), Expect = 6.8
Identities = 26/99 (26%), Positives = 46/99 (46%), Gaps = 11/99 (11%)
Query: 456 EGIPI--ERLPNIFASTFVSCGLISMAICVSVCYTVFHFELLEDVHHGVILSTGLISSAL 513
+G+PI E LP A + S I + + Y F+++E +HHG + L
Sbjct: 458 KGLPIKEEGLPTKEAQAYFSSMDIHFNYAL-LLYASVRFDIVEGIHHG--------ADHL 508
Query: 514 TCVLVIMHWDGISQRWYEGRSPIYERFSRGALMASAAVL 552
V+VI+H +G + + ++FS+ + SA V+
Sbjct: 509 LPVIVIIHLEGRGFSYATTERDLEKKFSKYGRVTSARVV 547
>10_01_0038 +
437738-438122,439215-439501,440111-440375,440687-440784
Length = 344
Score = 29.9 bits (64), Expect = 9.0
Identities = 14/35 (40%), Positives = 18/35 (51%)
Query: 650 RGHGVVLAGLFACAHWALGWGALGSPSRSRQLARG 684
RGH V G++ W LG G+ G S +R RG
Sbjct: 213 RGHDTVFDGVYVGRRWRLGGGSDGVLSSARSGGRG 247
>01_02_0045 - 10576475-10577198,10578347-10578504
Length = 293
Score = 29.9 bits (64), Expect = 9.0
Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 281 GDHGGESKAERTAAMFAYRGAGFGGQSPDIQTGREVEQTDLAPTMSAAFGRPPPA 335
G + G ++A AA+ A GAG G Q D +G + DL + SAA GRP P+
Sbjct: 92 GSNSG-ARAGEGAALGA-SGAGSGRQGADPVSGSSAGEQDLGSSGSAA-GRPHPS 143
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.324 0.137 0.424
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,468,324
Number of Sequences: 37544
Number of extensions: 1035392
Number of successful extensions: 3763
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 3752
Number of HSP's gapped (non-prelim): 13
length of query: 859
length of database: 14,793,348
effective HSP length: 88
effective length of query: 771
effective length of database: 11,489,476
effective search space: 8858385996
effective search space used: 8858385996
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 64 (29.9 bits)
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