Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001877-TA|BGIBMGA001877-PA|undefined
(859 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g17250.1 68418.m02021 phosphatidylinositolglycan class O (PIG... 194 3e-49
At2g22530.1 68415.m02672 phosphatidylinositolglycan-related simi... 158 1e-38
At3g01380.1 68416.m00060 phosphatidylinositolglycan class N (PIG... 40 0.005
At4g29700.1 68417.m04230 type I phosphodiesterase/nucleotide pyr... 40 0.007
At4g29690.1 68417.m04229 type I phosphodiesterase/nucleotide pyr... 35 0.20
At4g29680.1 68417.m04228 type I phosphodiesterase/nucleotide pyr... 34 0.35
At5g65070.1 68418.m08185 MADS-box protein (MAF4) contains Pfam p... 31 3.3
At1g21450.1 68414.m02682 scarecrow-like transcription factor 1 (... 31 4.3
At4g36060.2 68417.m05134 basic helix-loop-helix (bHLH) family pr... 30 7.5
At4g36060.1 68417.m05133 basic helix-loop-helix (bHLH) family pr... 30 7.5
At3g19720.2 68416.m02498 dynamin family protein identical to cDN... 30 7.5
At3g19720.1 68416.m02497 dynamin family protein identical to cDN... 30 7.5
At1g60030.1 68414.m06763 xanthine/uracil permease family protein... 30 7.5
At1g10540.1 68414.m01187 xanthine/uracil permease family protein... 30 7.5
>At5g17250.1 68418.m02021 phosphatidylinositolglycan class O (PIG-O)
family protein similar to Pig-o [Mus musculus]
GI:8099973
Length = 884
Score = 194 bits (472), Expect = 3e-49
Identities = 96/219 (43%), Positives = 141/219 (64%), Gaps = 11/219 (5%)
Query: 89 DKLEKPLPYQNRLPVMQRTLELCPDC-VRLFRFIADPPTTTLQRVKALVTGSLPTFIDAS 147
D +P P+ ++L ++Q TL D ++F+ ADPPTT+LQR+K L TG LPTFID
Sbjct: 60 DSSSEPKPWMDKLTILQ-TLAFANDSSAKIFKAFADPPTTSLQRLKGLTTGGLPTFIDIG 118
Query: 148 SNFAAMELQEDNIIDQVVNAGHHAVLLGDDTWSRLMPRRWFRAHTMYSFHTWDLDTVDIE 207
++F A + EDN I+Q+V G V++GDDTW++L P ++ +++ SF+ DLDTVD
Sbjct: 119 NSFGAPAIVEDNFINQLVLNGKRLVMMGDDTWTQLFPNQFQKSYPFPSFNVKDLDTVDNG 178
Query: 208 VDSKIYDELKKDDWDLLVAHYLGVDHAGHRYGPNHSEMKRKLDETNARIEKIIKIIP--- 264
++ L KDDWD+L+AH+LGVDHAGH +G + S M KL++ N+ +EK+I I+
Sbjct: 179 CIEHLFPTLFKDDWDVLIAHFLGVDHAGHIFGVDSSPMINKLEQYNSVLEKVINILESQA 238
Query: 265 ------KDVILYVVGDHGMTESGDHGGESKAERTAAMFA 297
++ +L V+GDHG T +GDHGG + E MFA
Sbjct: 239 GPGGLHENTMLIVMGDHGQTLNGDHGGGTAEEVETTMFA 277
Score = 44.4 bits (100), Expect = 3e-04
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 765 VPLLALWGRNGAAAAGPRTQMAAVFTLCLKFGLCFAVRVFMSALSATIHCRHLMIWGVFT 824
+PLL + A G + +F + + FG+ A V + L TI RHLM+WG+F
Sbjct: 802 LPLLIPFHSQTPQAHGEKRHQ--LFQMYMLFGVISATTVTATILCVTIQRRHLMVWGLFA 859
Query: 825 PKLLFE 830
PK +F+
Sbjct: 860 PKFVFD 865
>At2g22530.1 68415.m02672 phosphatidylinositolglycan-related similar
to Pig-o [Mus musculus] GI:8099973
Length = 897
Score = 158 bits (384), Expect = 1e-38
Identities = 98/285 (34%), Positives = 144/285 (50%), Gaps = 11/285 (3%)
Query: 67 PSHGRVVFILVDALRYDFTEYDDKLEKPLPYQNRLPVMQRTLELCPDCVRLFRFIADPPT 126
P R+++ ++D L +F D + +P Q L D + + A PPT
Sbjct: 68 PEKLRLLYQVIDGLPAEFVLGKDGKPPEKVLKESMPYTQSLLAN-GDAIG-YHAKAAPPT 125
Query: 127 TTLQRVKALVTGSLPTFIDASSNFAAMELQEDNIIDQVVNAGHHAVLLGDDTWSRLMPRR 186
T+ R+KA+V+G++ F+D + NF L +DNI+ Q G V+LGD+TW +L P
Sbjct: 126 VTMPRLKAMVSGAIGGFLDVAFNFNTQALLDDNILGQFFRIGWKMVMLGDETWLKLFPGL 185
Query: 187 WFRAHTMYSFHTWDLDTVDIEVDSKIYDELKKDDWDLLVAHYLGVDHAGHRYGPNHSEMK 246
+ R + SF D VD V + DEL DDW+LL+ HYLG+DH GH G N M
Sbjct: 186 FMRHDGVSSFFVKDTVQVDRNVSRHLPDELNSDDWNLLILHYLGLDHVGHTGGRNSPLMP 245
Query: 247 RKLDETN--ARIEKIIKIIPK-----DVILYVVGDHGMTESGDHGGESKAERTAAMFAYR 299
KL E + R + ++ + +L +V DHGMTE+G+HGG S E T ++ +
Sbjct: 246 AKLKEMDDIVRTMHLRAMMDRSHDQGQTLLIIVSDHGMTENGNHGG-SSYEETDSLMLFI 304
Query: 300 GAGFGGQSPDIQTGREVEQTDLAPTMSAAFGRPPPAPSLGNILFP 344
G T Q DLAPT++ FG P P ++G +L P
Sbjct: 305 GLNSNISDYASATNNVAFQVDLAPTLALLFGVPIPKNNVG-VLVP 348
>At3g01380.1 68416.m00060 phosphatidylinositolglycan class N (PIG-N)
family protein similar to phosphatidylinositolglycan
class N short form GB:BAA82620 [gi:5631308] [Mus
musculus]
Length = 921
Score = 40.3 bits (90), Expect = 0.005
Identities = 51/191 (26%), Positives = 78/191 (40%), Gaps = 36/191 (18%)
Query: 215 ELKKDDWDLLVAHYLGVDHAGHRYGPNHS---EMKRKLDETNARIEKIIKIIPKDV-ILY 270
EL D ++ H LG D GH + P S + +D+ R+ +++ +D Y
Sbjct: 237 ELLHQDKLVVFLHLLGCDSNGHAHRPYSSIYLNNVKVVDKIAERVYHLLEDYYRDNRTSY 296
Query: 271 V-VGDHGMTESGDHGGESKAERTAAMFAYRGAGFGGQSP-------------------DI 310
+ DHGM++ G HG + A+ GAG P D+
Sbjct: 297 IFTADHGMSDKGSHGDGHPTNTDTPLVAW-GAGIQYPKPASGNSHSDSVTTFVDKHAHDM 355
Query: 311 QTG-----REVE-----QTDLAPTMSAAFGRPPPAPSLGNILFPVLPKMTVAETLLHLTN 360
T R VE Q D+AP MS G P P S+GN+ + K+ AE + +
Sbjct: 356 PTPYDWGLRRVERVDVNQADIAPLMSTLLGLPCPVNSVGNLPLGYM-KLNEAEEVEAVVA 414
Query: 361 SLKQVSQYLVR 371
+ KQ+ L+R
Sbjct: 415 NTKQILNQLLR 425
>At4g29700.1 68417.m04230 type I phosphodiesterase/nucleotide
pyrophosphatase family protein similar to SP|P22413
Ectonucleotide pyrophosphatase/phosphodiesterase 1
(Plasma-cell membrane glycoprotein PC-1) [Includes:
Alkaline phosphodiesterase I (EC 3.1.4.1); Nucleotide
pyrophosphatase (EC 3.6.1.9) {Homo sapiens}; contains
Pfam profile PF01663: Type I phosphodiesterase /
nucleotide pyrophosphatase
Length = 461
Score = 39.9 bits (89), Expect = 0.007
Identities = 23/77 (29%), Positives = 43/77 (55%), Gaps = 7/77 (9%)
Query: 208 VDSKI--YDELKKDDWDLLVAHYLGVDHAGHRYGPNHSEMKRKLDETNARIEKIIKIIPK 265
VDS + +D L+ + DLL+ ++ D +GH YGP+ + + + I ++IK + +
Sbjct: 195 VDSVLSHFDHLEDEVPDLLMLYFDEPDQSGHNYGPDDPRVTTAVSRVDKMIGRVIKGLKQ 254
Query: 266 -----DVILYVVGDHGM 277
+V + ++GDHGM
Sbjct: 255 REIFDEVHVILLGDHGM 271
>At4g29690.1 68417.m04229 type I phosphodiesterase/nucleotide
pyrophosphatase family protein similar to SP|P22413
Ectonucleotide pyrophosphatase/phosphodiesterase 1
(Plasma-cell membrane glycoprotein PC-1) [Includes:
Alkaline phosphodiesterase I (EC 3.1.4.1); Nucleotide
pyrophosphatase (EC 3.6.1.9) {Homo sapiens}; contains
Pfam profile PF01663: Type I phosphodiesterase /
nucleotide pyrophosphatase
Length = 457
Score = 35.1 bits (77), Expect = 0.20
Identities = 20/75 (26%), Positives = 38/75 (50%), Gaps = 5/75 (6%)
Query: 213 YDELKKDDWDLLVAHYLGVDHAGHRYGPNHSEMKRKLDETNARIEKIIKIIPK-----DV 267
+D +++ D + ++ D GH YGP+ + + + + I +II + K DV
Sbjct: 200 FDLPEREIPDFMALYFDEPDIQGHEYGPDDPRVTEAVSKVDKMIGRIIMGLEKRKVFSDV 259
Query: 268 ILYVVGDHGMTESGD 282
+ ++GDHGM + D
Sbjct: 260 HVILLGDHGMVTNCD 274
>At4g29680.1 68417.m04228 type I phosphodiesterase/nucleotide
pyrophosphatase family protein similar to SP|P06802
Ectonucleotide pyrophosphatase/phosphodiesterase 1
(Plasma-cell membrane glycoprotein PC-1) [Includes:
Alkaline phosphodiesterase I (EC 3.1.4.1); Nucleotide
pyrophosphatase (EC 3.6.1.9) {Mus musculus}; contains
Pfam profile PF01663: Type I phosphodiesterase /
nucleotide pyrophosphatase
Length = 496
Score = 34.3 bits (75), Expect = 0.35
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Query: 232 DHAGHRYGPNHSEMKRKLDETNARIEKIIKIIPK-----DVILYVVGDHGMTESGD 282
DH GH+ GP+ ++ + + I ++I + K DV + +VGDHGM + D
Sbjct: 271 DHQGHQVGPDDPQITEAVVNIDRLIGRLIDGLEKRGIFEDVTMIMVGDHGMVGTCD 326
>At5g65070.1 68418.m08185 MADS-box protein (MAF4) contains Pfam
profile PF00319: SRF-type transcription factor
(DNA-binding and dimerisation domain); contains Pfam
profile PF01486: K-box region
Length = 200
Score = 31.1 bits (67), Expect = 3.3
Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Query: 13 LSRKTMSDITECQHLETFDCSGRERGNSSIEESC--TLDEKIKQILSVT 59
L KT++ ++ + LET C E + ++ C +L+E++K LSVT
Sbjct: 83 LEEKTLNYLSHKELLETIQCKIEEAKSDNVSIDCLKSLEEQLKTALSVT 131
>At1g21450.1 68414.m02682 scarecrow-like transcription factor 1
(SCL1) identical to scarecrow-like 1 GB:AAF21043
GI:6644390 from [Arabidopsis thaliana]
Length = 593
Score = 30.7 bits (66), Expect = 4.3
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 6/109 (5%)
Query: 14 SRKTMSDITECQHLETFDCSGRERGNSSIEESCTLDEKIKQILSVTGSPLICAPSHGRVV 73
S++ +S T Q L C+ R +EE+ ++ +++QI+S+ G P ++
Sbjct: 213 SKEVVSQATPKQIL--ISCA-RALSEGKLEEALSMVNELRQIVSIQGDPSQRIAAYMVEG 269
Query: 74 FILVDALRYDFTEYDDKLEKPLPYQNRLPVMQRTLELCPDCVRLFRFIA 122
A F K ++P P RL MQ E+CP C + F F+A
Sbjct: 270 LAARMAASGKFIYRALKCKEP-PSDERLAAMQVLFEVCP-CFK-FGFLA 315
>At4g36060.2 68417.m05134 basic helix-loop-helix (bHLH) family
protein contains Pfam profile: PF00010 helix-loop-helix
DNA-binding domain
Length = 268
Score = 29.9 bits (64), Expect = 7.5
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Query: 338 LGNILFPVLPKMTVAETLLHLTNSLKQVSQYLVRYGEESQQVSLDRLAHLINATREQIEK 397
LGN L P PK A L LK V + R E + +S + LI E E+
Sbjct: 49 LGNALDPNRPKSDKASVLTDTIQMLKDVMNQVDRLKAEYETLSQES-RELIQEKSELREE 107
Query: 398 AATVKTEDDL 407
AT+K++ ++
Sbjct: 108 KATLKSDIEI 117
>At4g36060.1 68417.m05133 basic helix-loop-helix (bHLH) family
protein contains Pfam profile: PF00010 helix-loop-helix
DNA-binding domain
Length = 286
Score = 29.9 bits (64), Expect = 7.5
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Query: 338 LGNILFPVLPKMTVAETLLHLTNSLKQVSQYLVRYGEESQQVSLDRLAHLINATREQIEK 397
LGN L P PK A L LK V + R E + +S + LI E E+
Sbjct: 67 LGNALDPNRPKSDKASVLTDTIQMLKDVMNQVDRLKAEYETLSQES-RELIQEKSELREE 125
Query: 398 AATVKTEDDL 407
AT+K++ ++
Sbjct: 126 KATLKSDIEI 135
>At3g19720.2 68416.m02498 dynamin family protein identical to cDNA
dynamin-like protein (ARC5) GI: 30349145; contains Pfam
profile PF00350: Dynamin family
Length = 741
Score = 29.9 bits (64), Expect = 7.5
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 355 LLHLTNSLKQVSQYLV-RYGE--ESQQVSLDRLAHLINATREQIEKAATVKTEDDLS 408
LLH+ L +S YL+ + GE +V L R+A N+ E EK+ K +DL+
Sbjct: 511 LLHILKRLLPISVYLLQKEGEYLSGHEVFLKRVASAFNSFVESTEKSCRDKCMEDLA 567
>At3g19720.1 68416.m02497 dynamin family protein identical to cDNA
dynamin-like protein (ARC5) GI: 30349145; contains Pfam
profile PF00350: Dynamin family
Length = 777
Score = 29.9 bits (64), Expect = 7.5
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 355 LLHLTNSLKQVSQYLV-RYGE--ESQQVSLDRLAHLINATREQIEKAATVKTEDDLS 408
LLH+ L +S YL+ + GE +V L R+A N+ E EK+ K +DL+
Sbjct: 511 LLHILKRLLPISVYLLQKEGEYLSGHEVFLKRVASAFNSFVESTEKSCRDKCMEDLA 567
>At1g60030.1 68414.m06763 xanthine/uracil permease family protein
contains Pfam profile: PF00860 permease family
Length = 538
Score = 29.9 bits (64), Expect = 7.5
Identities = 12/26 (46%), Positives = 17/26 (65%)
Query: 641 AIARRHVGWRGHGVVLAGLFACAHWA 666
++ R VGW+G GV+L GLF + A
Sbjct: 327 SVLSRGVGWQGVGVLLCGLFGAGNGA 352
>At1g10540.1 68414.m01187 xanthine/uracil permease family protein
contains Pfam profile: PF00860 permease family
Length = 539
Score = 29.9 bits (64), Expect = 7.5
Identities = 14/59 (23%), Positives = 26/59 (44%), Gaps = 4/59 (6%)
Query: 610 GDCWTSIGVGSTGQASRTALVMALGSMAAVV----AIARRHVGWRGHGVVLAGLFACAH 664
GD + + T +A+ A+ ++ R +GW+G G++L GLF +
Sbjct: 293 GDIFAMMAASFVSLVESTGTYIAVSRYASATPIPPSVLSRGIGWQGFGILLCGLFGAGN 351
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.324 0.137 0.424
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,193,199
Number of Sequences: 28952
Number of extensions: 788476
Number of successful extensions: 2603
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 2585
Number of HSP's gapped (non-prelim): 20
length of query: 859
length of database: 12,070,560
effective HSP length: 87
effective length of query: 772
effective length of database: 9,551,736
effective search space: 7373940192
effective search space used: 7373940192
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 63 (29.5 bits)
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