Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001876-TA|BGIBMGA001876-PA|IPR006046|Glycoside hydrolase
family 13, IPR001917|Aminotransferase, class-II, IPR006589|Glycosyl
hydrolase, family 13, subfamily, catalytic region,
IPR006048|Alpha-amylase, C-terminal all beta,
IPR011282|2-amino-3-ketobutyrate coenzyme A ligase,
IPR013772|Alpha-amylase
(1061 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_29250| Best HMM Match : Aminotran_1_2 (HMM E-Value=7.4e-07) 209 1e-53
SB_11194| Best HMM Match : No HMM Matches (HMM E-Value=.) 149 2e-35
SB_33262| Best HMM Match : DOMON (HMM E-Value=2.7e-28) 97 7e-20
SB_33803| Best HMM Match : Aminotran_1_2 (HMM E-Value=2.6e-26) 94 6e-19
SB_49613| Best HMM Match : Transposase_5 (HMM E-Value=0.033) 66 1e-10
SB_56472| Best HMM Match : Transposase_5 (HMM E-Value=1.2) 62 2e-09
SB_42850| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 2e-09
SB_30859| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 2e-09
SB_1045| Best HMM Match : Hormone_3 (HMM E-Value=3.9) 62 3e-09
SB_21757| Best HMM Match : Hormone_3 (HMM E-Value=3.9) 59 2e-08
SB_16626| Best HMM Match : DUF1257 (HMM E-Value=3.6) 53 1e-06
SB_40788| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 3e-04
SB_53465| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.032
SB_28731| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.032
SB_35461| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.17
SB_58546| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.23
SB_397| Best HMM Match : MFS_1 (HMM E-Value=0.16) 36 0.23
SB_13925| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.70
SB_17270| Best HMM Match : ABC_tran (HMM E-Value=5.1e-08) 32 2.8
SB_15799| Best HMM Match : PH (HMM E-Value=0.76) 30 8.6
SB_3033| Best HMM Match : RRM_1 (HMM E-Value=2.3e-20) 30 8.6
>SB_29250| Best HMM Match : Aminotran_1_2 (HMM E-Value=7.4e-07)
Length = 252
Score = 209 bits (510), Expect = 1e-53
Identities = 109/203 (53%), Positives = 135/203 (66%), Gaps = 22/203 (10%)
Query: 757 LENRLSQFHGREDTILYGSCFDANAGLFESMLTPEDAVFSDALNHASIIDGIRLCKAQKY 816
LE ++S+FHG ED ILY C+DAN GLFES+LT EDAVFSD LNHAS+IDGIRLC+A+K+
Sbjct: 36 LEAKISKFHGMEDAILYACCYDANTGLFESLLTAEDAVFSDELNHASMIDGIRLCRAKKF 95
Query: 817 RYPHRDLT---------------------ELEHLLAHSE-ARIKLIVTDGVFSMDGTVAP 854
+Y H D+ +LE L ++ ARIKLI +DGVFSMDG++AP
Sbjct: 96 KYKHIDVQGVAVNLSLETLADVQLICFYLDLEEKLKEADGARIKLIASDGVFSMDGSMAP 155
Query: 855 IKGLRDLADKYRALLVVDDSHAXXXXXXXXXXXXXYCGVMGAADIICSTLGKAVSGAAGG 914
+ + DLADKY AL+ +D+ HA Y G G DII STLGKA+ GAAGG
Sbjct: 156 LPEICDLADKYGALVFIDECHATGFLGDTGRGTDEYTGTRGRVDIINSTLGKALGGAAGG 215
Query: 915 YTTGPKELVTLLRNVSRPYLFSN 937
YTTGP +LV +LR SRPYL+SN
Sbjct: 216 YTTGPSQLVQMLRQKSRPYLYSN 238
Score = 55.2 bits (127), Expect = 3e-07
Identities = 25/34 (73%), Positives = 28/34 (82%)
Query: 692 NHPEVVEAAREGLKKYGAGLSSVRFICGTQSIHK 725
++ EVV AA+E L KYG GLSSVRFICGTQ IHK
Sbjct: 1 SNAEVVNAAKEALMKYGNGLSSVRFICGTQDIHK 34
>SB_11194| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 613
Score = 149 bits (360), Expect = 2e-35
Identities = 95/289 (32%), Positives = 148/289 (51%), Gaps = 7/289 (2%)
Query: 756 ELENRLSQFHGREDTILYGSCFDANAGLFESM--LTPEDAVFSDALNHASIIDGIRLCKA 813
+LE L+Q H +E +L+ SC+ AN ++ P +FSDA NHAS+I GIR A
Sbjct: 272 QLEKVLAQLHQKEAALLFTSCYVANDTTLYTLGKHLPGCLIFSDAGNHASMIQGIRNSGA 331
Query: 814 QKYRYPHRDLTELEHLLAHSE-ARIKLIVTDGVFSMDGTVAPIKGLRDLADKYRALLVVD 872
+K+ + H D L LLA ++ A K++ + V SM G ++PIK L D+A KY AL VD
Sbjct: 332 KKFIFRHNDPEHLGKLLAAADPAAPKIVAFETVHSMTGDISPIKQLCDVAHKYGALTFVD 391
Query: 873 DSHAXXXXXXXXXXXXXYCGVMGAADIICSTLGKAVSGAAGGYTTGPKELVTLLRNVSRP 932
+ HA G++ DII TLGKA G GGY G L+ +R+
Sbjct: 392 EVHAVGLYGHHGGGVGERDGLLADMDIISGTLGKAF-GVIGGYIAGTASLIDTIRSYGAG 450
Query: 933 YLFSNXXXXXXXXXSLKSLDLVE-RSGELRQRLRQNTTA-FREGLKAAGLTVAGDDHPIC 990
++F+ ++KS++++ G +R+ Q+ A R L GL V I
Sbjct: 451 FIFTTALPPITVKSAIKSIEILSGDEGRDLRRVHQSVVARLRNKLVQRGLPVVYAPSHII 510
Query: 991 PVMVGEASLAVDLASGMLER-GVYVVAFSYPVVPKGAARVRVQLSAAHS 1038
P+ VG+A +++ ++ + +Y A +YP V KG R+R+ + H+
Sbjct: 511 PIHVGDAGKCTQVSNDLMSKHNIYAQAINYPTVAKGEERLRIAPTPMHT 559
>SB_33262| Best HMM Match : DOMON (HMM E-Value=2.7e-28)
Length = 595
Score = 97.1 bits (231), Expect = 7e-20
Identities = 67/239 (28%), Positives = 114/239 (47%), Gaps = 14/239 (5%)
Query: 756 ELENRLSQFHGREDTILYGSCFDANAGLFESMLTPEDAVFSDALNHASIIDGIRLCKAQK 815
ELE +++F G+E +++G F N+ +++ D + SD LNH+S++ G RL A
Sbjct: 8 ELEKMVARFVGKESAMVFGMGFATNSTNIPVLVSKGDLIISDELNHSSLVLGARLSGATI 67
Query: 816 YRYPHRDLTELEHLL----------AHSEARIKLIVTDGVFSMDGTVAPIKGLRDLADKY 865
+ H D+ LE++L H R LI+ +GV+SM+G++ + + L KY
Sbjct: 68 KVFKHNDIKSLENMLRTSVVQGQPRTHRPWRKILIIVEGVYSMEGSLVRLPEIVALKKKY 127
Query: 866 RALLVVDDSHAXXXXXXXXXXXXXYCGVMGA-ADIICSTLGKAVSGAAGGYTTGPKELVT 924
+A L +D++H+ Y GV A DI+ T K+ GAAGGY KE++
Sbjct: 128 KAYLYLDEAHSIGAVGPTGRGVSEYFGVNPADIDIMMGTFTKSF-GAAGGYIASSKEIIN 186
Query: 925 LLRNVSRPYLFSNXXXXXXXXXSLKSLDLVERSGELRQRLRQNTTAFREGLKAAGLTVA 983
+R S +++ S+ ++ GE L + T + K+ +T A
Sbjct: 187 HIRGCSHSAAYASSMSPPVTLQIYTSMKII--LGEDGTNLEKMTLYWSVDRKSESITFA 243
>SB_33803| Best HMM Match : Aminotran_1_2 (HMM E-Value=2.6e-26)
Length = 391
Score = 93.9 bits (223), Expect = 6e-19
Identities = 58/193 (30%), Positives = 98/193 (50%), Gaps = 12/193 (6%)
Query: 756 ELENRLSQFHGREDTILYGSCFDANAGLFESMLTPEDAVFSDALNHASIIDGIRLCKAQK 815
ELE +++F G+E +++G F N+ +++ D + SD LNH+S++ G RL A
Sbjct: 151 ELEKMVARFVGKESAMVFGMGFATNSTNIPVLVSKGDLIISDELNHSSLVLGARLSGATI 210
Query: 816 YRYPHRDLTELEHLL----------AHSEARIKLIVTDGVFSMDGTVAPIKGLRDLADKY 865
+ H D+ LE+ L H R LI+ +GV+SM+G++ + + + KY
Sbjct: 211 KVFKHNDIKSLENKLRTSVVQGQPRTHRPWRKILIIVEGVYSMEGSLVRLPEIVAIKKKY 270
Query: 866 RALLVVDDSHAXXXXXXXXXXXXXYCGVMGA-ADIICSTLGKAVSGAAGGYTTGPKELVT 924
+A L +D++H+ Y GV A DI+ T K+ GAAGGY KE++
Sbjct: 271 KAYLYLDEAHSIGAVGPTGRGVSEYFGVSPADIDIMMGTFTKSF-GAAGGYIASSKEVIN 329
Query: 925 LLRNVSRPYLFSN 937
+R S +++
Sbjct: 330 HIRGCSHSAAYAS 342
>SB_49613| Best HMM Match : Transposase_5 (HMM E-Value=0.033)
Length = 999
Score = 66.5 bits (155), Expect = 1e-10
Identities = 28/55 (50%), Positives = 38/55 (69%)
Query: 2 WFQQDDATCHTARKTLNLLDEKFEGFVIPRGGDINWPPRSCDLTWLDYFLWGYVK 56
WFQQD AT HTA +T+ L ++FEG +I R D+ W P S DL D++LWG++K
Sbjct: 659 WFQQDGATPHTANETIAWLRQRFEGRLISRRCDVEWAPHSPDLNPPDFYLWGFLK 713
>SB_56472| Best HMM Match : Transposase_5 (HMM E-Value=1.2)
Length = 615
Score = 62.1 bits (144), Expect = 2e-09
Identities = 27/55 (49%), Positives = 36/55 (65%)
Query: 2 WFQQDDATCHTARKTLNLLDEKFEGFVIPRGGDINWPPRSCDLTWLDYFLWGYVK 56
WFQQD AT HTA T+ L ++FE +I R D+ W P S DL D++LWG++K
Sbjct: 274 WFQQDGATPHTANGTIAWLRQRFEEKLISRRCDVEWAPHSPDLNPPDFYLWGFLK 328
>SB_42850| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 474
Score = 62.1 bits (144), Expect = 2e-09
Identities = 27/55 (49%), Positives = 36/55 (65%)
Query: 2 WFQQDDATCHTARKTLNLLDEKFEGFVIPRGGDINWPPRSCDLTWLDYFLWGYVK 56
WFQQD AT HTA T+ L ++FE +I R D+ W P S DL D++LWG++K
Sbjct: 50 WFQQDGATPHTANGTIAWLRQRFEEKLISRRCDVEWAPHSPDLNPPDFYLWGFLK 104
>SB_30859| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 163
Score = 62.1 bits (144), Expect = 2e-09
Identities = 27/55 (49%), Positives = 36/55 (65%)
Query: 2 WFQQDDATCHTARKTLNLLDEKFEGFVIPRGGDINWPPRSCDLTWLDYFLWGYVK 56
WFQQD AT HTA T+ L ++FE +I R D+ W P S DL D++LWG++K
Sbjct: 50 WFQQDGATPHTANGTIAWLRQRFEEKLISRRCDVEWAPHSPDLNPPDFYLWGFLK 104
>SB_1045| Best HMM Match : Hormone_3 (HMM E-Value=3.9)
Length = 153
Score = 61.7 bits (143), Expect = 3e-09
Identities = 27/55 (49%), Positives = 36/55 (65%)
Query: 2 WFQQDDATCHTARKTLNLLDEKFEGFVIPRGGDINWPPRSCDLTWLDYFLWGYVK 56
WFQQD AT HTA T+ L ++FE +I R D+ W P S DL D++LWG++K
Sbjct: 50 WFQQDGATPHTANGTIAWLRQRFEEKLISRRCDVEWVPHSPDLNPPDFYLWGFLK 104
>SB_21757| Best HMM Match : Hormone_3 (HMM E-Value=3.9)
Length = 254
Score = 58.8 bits (136), Expect = 2e-08
Identities = 26/55 (47%), Positives = 35/55 (63%)
Query: 2 WFQQDDATCHTARKTLNLLDEKFEGFVIPRGGDINWPPRSCDLTWLDYFLWGYVK 56
WFQQD AT HTA T+ L ++FE +I R D+ W S DL D++LWG++K
Sbjct: 50 WFQQDGATPHTANGTIAWLRQRFEEKLISRRCDVEWAQHSPDLNPPDFYLWGFLK 104
>SB_16626| Best HMM Match : DUF1257 (HMM E-Value=3.6)
Length = 267
Score = 53.2 bits (122), Expect = 1e-06
Identities = 24/52 (46%), Positives = 33/52 (63%)
Query: 5 QDDATCHTARKTLNLLDEKFEGFVIPRGGDINWPPRSCDLTWLDYFLWGYVK 56
QD AT HTA T+ L ++FE +I R D+ W P S DL D++LWG++K
Sbjct: 1 QDGATPHTANGTIAWLRQRFEEKLISRRCDVEWAPHSPDLNPPDFYLWGFLK 52
>SB_40788| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 164
Score = 45.2 bits (102), Expect = 3e-04
Identities = 27/109 (24%), Positives = 53/109 (48%), Gaps = 3/109 (2%)
Query: 933 YLFSNXXXXXXXXXSLKSLDLVERS-GELRQRLRQNTTA-FREGLKAAGLTVAGDDHPIC 990
++F+ ++KS++++ G +R+ Q+ A R L GL V I
Sbjct: 2 FIFTTALPPITVKSAIKSIEILSGDEGRDLRRVHQSVVARLRNKLVQRGLPVVYAPSHII 61
Query: 991 PVMVGEASLAVDLASGMLER-GVYVVAFSYPVVPKGAARVRVQLSAAHS 1038
P+ VG+A +++ ++ + +Y A +YP V KG R+R+ + H+
Sbjct: 62 PIHVGDAGKCTQVSNDLMSKHNIYAQAINYPTVAKGEERLRIAPTPMHT 110
>SB_53465| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 34
Score = 38.3 bits (85), Expect = 0.032
Identities = 15/33 (45%), Positives = 24/33 (72%)
Query: 1028 RVRVQLSAAHSSGDVTRAVQAFAEVAKNVGIVK 1060
R+RVQLSA HS ++ VQ F +V K++G+++
Sbjct: 2 RIRVQLSAGHSKEEIDTCVQTFIDVGKDMGVLQ 34
>SB_28731| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 101
Score = 38.3 bits (85), Expect = 0.032
Identities = 22/80 (27%), Positives = 37/80 (46%)
Query: 757 LENRLSQFHGREDTILYGSCFDANAGLFESMLTPEDAVFSDALNHASIIDGIRLCKAQKY 816
LE RL++F E+ ILY F A + D +F D +I G+ +++
Sbjct: 6 LEERLAKFMHTEEAILYSYGFSTVASAIPAYSKRGDVLFCDKGVCFAIQQGVTASRSRVM 65
Query: 817 RYPHRDLTELEHLLAHSEAR 836
+ H D+ +LE LL + +
Sbjct: 66 WFEHNDMDDLERLLKEQQEK 85
>SB_35461| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 545
Score = 35.9 bits (79), Expect = 0.17
Identities = 36/150 (24%), Positives = 58/150 (38%), Gaps = 7/150 (4%)
Query: 146 GNERQFADMVRRCNAAGVRIYVDAVINHMTGEPPENIGTAGNTA-VYREWYY--PAVPYR 202
G F +++ ++ G+++ +D V NH + + + + N REWY A
Sbjct: 96 GTMEDFESLLQDIHSRGMKLLLDFVPNHTSDQHDWFLESRSNRHNPRREWYIWRDAASDG 155
Query: 203 AEHFNWPHCVIDGSDYVNDALRVRNCELVGLK---DLNQANEHTRNMIVNFMNKLIDLGV 259
NW V GS + D + K DLN N N + +D GV
Sbjct: 156 TPPNNWLS-VFGGSAWSLDRKTNQYYLHQFFKEQPDLNFRNPDVVNATKEVLGFWLDKGV 214
Query: 260 AGFRIDAAKHMWPEDXXXXXXXXXXXXTAH 289
GFR+DA H+ ++ T+H
Sbjct: 215 DGFRVDAVPHLLEDEEFRDEPVLASYDTSH 244
>SB_58546| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 947
Score = 35.5 bits (78), Expect = 0.23
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 701 REGLKKYGAGLSSVRFICGTQSIHKGYKFVNLIGENNTNKLRRNRESND-NTVSISELEN 759
R G++ G G+S+V F+CG+ + +F+N++ + K + D + V IS +N
Sbjct: 162 RTGMRMLG-GVSAVMFVCGSIYLPPPQEFLNMMDWTSYEKGYKIEGFVDFDMVHISSFDN 220
Query: 760 RLSQFHGREDTILYG 774
L Q H E+ ++ G
Sbjct: 221 ILQQEHYEENVVVLG 235
>SB_397| Best HMM Match : MFS_1 (HMM E-Value=0.16)
Length = 394
Score = 35.5 bits (78), Expect = 0.23
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 701 REGLKKYGAGLSSVRFICGTQSIHKGYKFVNLIGENNTNKLRRNRESND-NTVSISELEN 759
R G++ G G+S+V F+CG+ + +F+N++ + K + D + V IS +N
Sbjct: 112 RTGMRMLG-GVSAVMFVCGSIYLPPPQEFLNMMDWTSYEKGYKIEGFVDFDMVHISSFDN 170
Query: 760 RLSQFHGREDTILYG 774
L Q H E+ ++ G
Sbjct: 171 ILQQEHYEENVVVLG 185
>SB_13925| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 317
Score = 33.9 bits (74), Expect = 0.70
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 6/59 (10%)
Query: 819 PHRDLTELEHLLAHSEARIKLIVTDGVFSMDGTVAP----IKGLRDLADKYRALLVVDD 873
P+ DL LE + S+ + + + G V P +KG+RDL DKY L + D+
Sbjct: 139 PYNDLAALEKSI--SDPNTAAFMVEPIQGEAGVVVPDAGYLKGVRDLCDKYNVLFIADE 195
>SB_17270| Best HMM Match : ABC_tran (HMM E-Value=5.1e-08)
Length = 771
Score = 31.9 bits (69), Expect = 2.8
Identities = 12/32 (37%), Positives = 20/32 (62%)
Query: 209 PHCVIDGSDYVNDALRVRNCELVGLKDLNQAN 240
PH VID S N + +L+G+++LN++N
Sbjct: 461 PHTVIDTSSTANLVASTKGVQLIGMRELNESN 492
>SB_15799| Best HMM Match : PH (HMM E-Value=0.76)
Length = 836
Score = 30.3 bits (65), Expect = 8.6
Identities = 20/68 (29%), Positives = 27/68 (39%)
Query: 557 SQSHNYYLSCSGYTLRIKLRDWSGRCSPASPTPAPPFRRQRRGAPPFVAMALRSQLLRNV 616
S Y+L + Y+ + L D S P P PP RQ G P + LRN
Sbjct: 219 SNCFEYFLYKAVYSDILHLVDTGLLMSEKKPPPRPPLPRQGSGGKPPSGANTGAGRLRNA 278
Query: 617 LNGTQVRH 624
L +R+
Sbjct: 279 LASISIRY 286
>SB_3033| Best HMM Match : RRM_1 (HMM E-Value=2.3e-20)
Length = 1313
Score = 30.3 bits (65), Expect = 8.6
Identities = 20/68 (29%), Positives = 27/68 (39%)
Query: 557 SQSHNYYLSCSGYTLRIKLRDWSGRCSPASPTPAPPFRRQRRGAPPFVAMALRSQLLRNV 616
S Y+L + Y+ + L D S P P PP RQ G P + LRN
Sbjct: 93 SNCFEYFLYKAVYSDILHLVDTGLLMSEKKPPPRPPLPRQGSGGKPPSGANTGAGRLRNA 152
Query: 617 LNGTQVRH 624
L +R+
Sbjct: 153 LASISIRY 160
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.320 0.136 0.427
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,541,537
Number of Sequences: 59808
Number of extensions: 1477375
Number of successful extensions: 3089
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 3056
Number of HSP's gapped (non-prelim): 26
length of query: 1061
length of database: 16,821,457
effective HSP length: 90
effective length of query: 971
effective length of database: 11,438,737
effective search space: 11107013627
effective search space used: 11107013627
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 65 (30.3 bits)
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