GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001876-TA|BGIBMGA001876-PA|IPR006046|Glycoside hydrolase
family 13, IPR001917|Aminotransferase, class-II, IPR006589|Glycosyl
hydrolase, family 13, subfamily, catalytic region,
IPR006048|Alpha-amylase, C-terminal all beta,
IPR011282|2-amino-3-ketobutyrate coenzyme A ligase,
IPR013772|Alpha-amylase
         (1061 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L04753-1|AAA29357.1|  511|Anopheles gambiae alpha-amylase protein.    570   e-164
AF469165-1|AAL68692.1|  226|Anopheles gambiae amylase protein.        168   6e-43
X87410-1|CAA60857.1|  498|Anopheles gambiae maltase-like protein...    38   0.002
X87411-1|CAA60858.1|  599|Anopheles gambiae maltase-like protein...    29   0.85 
AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.       27   2.0  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           26   4.5  
L10440-1|AAA29360.1|  154|Anopheles gambiae transposase protein.       26   6.0  
CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein ...    25   7.9  

>L04753-1|AAA29357.1|  511|Anopheles gambiae alpha-amylase protein.
          Length = 511

 Score =  570 bits (1406), Expect = e-164
 Identities = 272/485 (56%), Positives = 342/485 (70%), Gaps = 12/485 (2%)

Query: 70  VVAYKNPHYVTGRSVNVHLFEWKWNDIADECERFLGPRGFGGIQISPPNENVV--LWTYN 127
           V A  +PH+V G S  VHLFEWKW+DIADECERFLGP+G+GG+Q+SP NEN+V  L   +
Sbjct: 20  VAAQHDPHFVRGHSTIVHLFEWKWSDIADECERFLGPKGYGGVQLSPVNENIVIRLADGS 79

Query: 128 RPWWERYQPISYELVTRSGNERQFADMVRRCNAAGVRIYVDAVINHMTGEPPEN--IGTA 185
           RPWWERYQPIS++L TRSG+E +FADM RRCNAAGVR+YVD +INHM    P    IGT 
Sbjct: 80  RPWWERYQPISFKLDTRSGSEAEFADMSRRCNAAGVRLYVDIIINHMGATQPVEPAIGTG 139

Query: 186 GNTAVYREWYYPAVPYRAEHFNWPHCVIDGSDYVNDALRVRNCELVGLKDLNQANEHTRN 245
            +TA+  +  +PAVP+    FN P C I+  D+ N A ++RNCELVGL DLNQA    R+
Sbjct: 140 SSTAIPSDRQFPAVPFGWPDFN-PPCAIN--DWGN-AEQIRNCELVGLHDLNQAVPWVRD 195

Query: 246 MIVNFMNKLIDLGVAGFRIDAAKHMWPEDXXXXXXXXXXXXTAHGFPSNARPYIYQEVID 305
            +V+F+N LI+LGVAGFR+DAAKHMWP D            TA+GF   +R ++ QEVID
Sbjct: 196 RVVDFLNHLIELGVAGFRVDAAKHMWPADLAVIFGRLNNLNTAYGFAPGSRAFLAQEVID 255

Query: 306 YGG-EAISRDEYTPIGAVTEFKAGMELSRAFRGNNQLRWLSSWGTQWGLLAHSDSLTFID 364
            G  EA+ + EYT +G VTEF     L RAF GN+ LRWLS++G  W LLA  ++  F+D
Sbjct: 256 MGAHEAVRKFEYTFLGTVTEFMFSHYLGRAFGGNDALRWLSNFGEAWRLLASREAFVFVD 315

Query: 365 NHDNERXXXXXXXVLTYKEPRPYKAAIAFLLAHPYGEPQIMSSFLFWDSEIGPPMDHSGN 424
           NHDN+R       +LTYK+P+PYK A AF  A+PYG+ +IMSSF F D + GPP D  GN
Sbjct: 316 NHDNQRGDYG---ILTYKQPKPYKMATAFAAAYPYGQLRIMSSFAFTDFDQGPPSDAQGN 372

Query: 425 IISPAINSDGTCGNGWVCQHRWRQIYSMVAFRNVAGNTDVVEWWDNGSNQIAFCRGTKAF 484
           ++SP IN D TCG GWVC+HRWRQ+YSM+ FRN+A  T +  WWDNG+NQIAF RG   F
Sbjct: 373 LLSPIINPDKTCGGGWVCEHRWRQMYSMIHFRNLAWGTPLRHWWDNGNNQIAFARGDVGF 432

Query: 485 IAFNNDRWDLNQSLQTCLPAGSYCDVISGSKIGSWCQGKTVTVQSDGRAQIQVGANDYDM 544
           +AFNN+ +D+N  LQT LPAG YCDVISG++ G  C G  V V+ +G A I + AN  D 
Sbjct: 433 VAFNNEPFDMNVILQTGLPAGIYCDVISGAREGETCTGLQVIVEPNGFASISIRANAEDG 492

Query: 545 MLAIH 549
           ++AIH
Sbjct: 493 VIAIH 497


>AF469165-1|AAL68692.1|  226|Anopheles gambiae amylase protein.
          Length = 226

 Score =  168 bits (409), Expect = 6e-43
 Identities = 82/190 (43%), Positives = 107/190 (56%), Gaps = 2/190 (1%)

Query: 349 TQWGLLAHSDSLTFIDNHDNERXXXXXX-XVLTYKEPRPYKAAIAFLLAHPYGEPQIMSS 407
           TQ GL     +L F+DNHDN+R         LT+K+ + Y  AIAF LA  YG  ++MSS
Sbjct: 23  TQVGLTPSDAALVFVDNHDNQRGHGAGGDSTLTFKDGQTYTQAIAFTLATDYGTVRLMSS 82

Query: 408 FLFWDSEIGPPMDHSGNIISPAINSDGTCGNGWVCQHRWRQIYSMVAFRNVAGNTDVVEW 467
           + F D++ GPP D   NI+ P IN+DG+C NGWVC+HRW  +  MV+FRN      +   
Sbjct: 83  YNFTDTDQGPPSDDRANILPPGINADGSCQNGWVCEHRWPVVRRMVSFRNFVAPAPLTNV 142

Query: 468 WDNGSNQIAFCRGTKAFIAFNNDRWDLNQSLQTCLPAGSYCDVISGSKIGSWCQGKTVTV 527
             +G    AFCRG   F  FN      +   + CLP G YCD+ISG + G+ C G  V V
Sbjct: 143 QYSGGT-FAFCRGAIGFALFNAGPETSDGIWKACLPPGEYCDIISGERDGTMCTGTRVLV 201

Query: 528 QSDGRAQIQV 537
             DGR  + V
Sbjct: 202 DGDGRVSLTV 211


>X87410-1|CAA60857.1|  498|Anopheles gambiae maltase-like protein
           Agm1 protein.
          Length = 498

 Score = 37.5 bits (83), Expect = 0.002
 Identities = 36/123 (29%), Positives = 54/123 (43%), Gaps = 10/123 (8%)

Query: 158 CNAAGVRIYVDAVINHMTGEPPENIGTAGNTAVYREWY--YP----AVPYRAEHFNWPHC 211
           CNA G+++ +D V NH + E    + +      Y ++Y  +P    A   R    NW   
Sbjct: 107 CNAEGLKLILDFVPNHSSDESEWFLKSVQKDPTYSDYYVWHPGKTLANGTRVPPSNWV-S 165

Query: 212 VIDGSDYV-NDALRVRNCE--LVGLKDLNQANEHTRNMIVNFMNKLIDLGVAGFRIDAAK 268
           V  GS +  ND  +       LV   DLN  N      + + M   +  GV GFRIDA  
Sbjct: 166 VFRGSAWEWNDVRKEYYLHQFLVKQPDLNYRNPALVQEMKDVMTFWLGKGVHGFRIDAVP 225

Query: 269 HMW 271
           +++
Sbjct: 226 YLF 228


>X87411-1|CAA60858.1|  599|Anopheles gambiae maltase-like protein
           Agm2 protein.
          Length = 599

 Score = 28.7 bits (61), Expect = 0.85
 Identities = 32/127 (25%), Positives = 46/127 (36%), Gaps = 6/127 (4%)

Query: 146 GNERQFADMVRRCNAAGVRIYVDAVINHMTGEPPENIGTAGNTAVYREWYYPAVPY---- 201
           G    F  +V       +RI +D V NH + E      +    + Y ++Y    P     
Sbjct: 94  GTLADFKQLVEEAKKLQLRIILDFVPNHSSDEHEWFKKSVQRVSGYEDYYVWQDPKPGTE 153

Query: 202 RAEHFNWPHCVIDGSDYVNDALRVRNCELVGLK--DLNQANEHTRNMIVNFMNKLIDLGV 259
           R    NW       +   ND  +         K  DLN  N      + + +   +D GV
Sbjct: 154 RDPPNNWVAAWYGSAWEWNDERKQFYLHQFHKKQPDLNYRNPAVVQAMKDVLRFWLDQGV 213

Query: 260 AGFRIDA 266
            GFRIDA
Sbjct: 214 DGFRIDA 220


>AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.
          Length = 525

 Score = 27.5 bits (58), Expect = 2.0
 Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 8/57 (14%)

Query: 685 NNYLGLSNHPEVVEAAREGLKKYG----AGLSSVRFICGTQ----SIHKGYKFVNLI 733
           N  +   NH ++VE  RE    YG    A ++SV F  G       I K + F+N++
Sbjct: 165 NPLIDRDNHAQLVEEMREEFDHYGLLLTAAVASVEFSAGVSYDIPRISKSFHFLNVM 221


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 26.2 bits (55), Expect = 4.5
 Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 2/33 (6%)

Query: 581  RCSPASPTPAPPFRRQRRGAPPFVAMALRSQLL 613
            R SPASPTP+   +R +  +P  +   L S LL
Sbjct: 1460 RSSPASPTPSKKSKRHQSASP--IRHILNSPLL 1490


>L10440-1|AAA29360.1|  154|Anopheles gambiae transposase protein.
          Length = 154

 Score = 25.8 bits (54), Expect = 6.0
 Identities = 9/20 (45%), Positives = 14/20 (70%)

Query: 3   FQQDDATCHTARKTLNLLDE 22
           F QD+A CH + +T+  +DE
Sbjct: 125 FHQDNAPCHKSLRTMAKIDE 144


>CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein
           protein.
          Length = 1087

 Score = 25.4 bits (53), Expect = 7.9
 Identities = 10/19 (52%), Positives = 13/19 (68%)

Query: 568 GYTLRIKLRDWSGRCSPAS 586
           G T+R K+ DW GRC  A+
Sbjct: 366 GGTVRSKMLDWIGRCLHAN 384


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.320    0.136    0.427 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,106,159
Number of Sequences: 2123
Number of extensions: 47306
Number of successful extensions: 136
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 119
Number of HSP's gapped (non-prelim): 9
length of query: 1061
length of database: 516,269
effective HSP length: 71
effective length of query: 990
effective length of database: 365,536
effective search space: 361880640
effective search space used: 361880640
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 53 (25.4 bits)