Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001876-TA|BGIBMGA001876-PA|IPR006046|Glycoside hydrolase
family 13, IPR001917|Aminotransferase, class-II, IPR006589|Glycosyl
hydrolase, family 13, subfamily, catalytic region,
IPR006048|Alpha-amylase, C-terminal all beta,
IPR011282|2-amino-3-ketobutyrate coenzyme A ligase,
IPR013772|Alpha-amylase
(1061 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g04620.2 68418.m00464 aminotransferase class I and II family ... 161 2e-39
At5g04620.1 68418.m00465 aminotransferase class I and II family ... 138 2e-32
At5g23670.1 68418.m02775 serine C-palmitoyltransferase (LCB2) id... 128 3e-29
At3g48780.1 68416.m05327 serine C-palmitoyltransferase, putative... 124 2e-28
At3g48790.1 68416.m05328 serine C-palmitoyltransferase, putative... 121 2e-27
At4g36480.1 68417.m05180 aminotransferase class I and II family ... 88 3e-17
At1g69830.1 68414.m08034 alpha-amylase, putative / 1,4-alpha-D-g... 33 0.76
At1g16960.1 68414.m02059 expressed protein 32 1.8
At5g03010.1 68418.m00247 kelch repeat-containing protein contain... 32 2.3
At1g22930.1 68414.m02866 T-complex protein 11 contains Pfam PF05... 32 2.3
At4g25000.1 68417.m03587 alpha-amylase, putative / 1,4-alpha-D-g... 31 4.1
At1g76130.1 68414.m08841 alpha-amylase, putative / 1,4-alpha-D-g... 31 4.1
At3g51250.1 68416.m05610 senescence/dehydration-associated prote... 31 5.4
At2g39930.1 68415.m04907 isoamylase, putative / starch debranchi... 31 5.4
At1g76920.1 68414.m08954 F-box family protein (FBX3) contains si... 31 5.4
At2g31990.1 68415.m03908 exostosin family protein contains Pfam ... 30 7.1
>At5g04620.2 68418.m00464 aminotransferase class I and II family
protein similar to 8-amino-7-oxononanoate synthase,
Bacillus sphaericus, PIR:JQ0512 [SP|P22806], Bacillus
subtilis [SP|P53556]; contains Pfam protile PF00155
aminotransferase, classes I and II
Length = 476
Score = 161 bits (391), Expect = 2e-39
Identities = 112/382 (29%), Positives = 187/382 (48%), Gaps = 27/382 (7%)
Query: 673 QGAQGEFLNFCANNYLGLSNHPEVVEAAREGLKKYGAGLSSVRFICGTQSIHKGYKFVNL 732
+G + L F N+YLGLS+HP + AA +K+YG G ICG + H+
Sbjct: 98 KGRFKKLLLFSGNDYLGLSSHPTISNAAANAVKEYGMGPKGSALICGYTTYHR------- 150
Query: 733 IGENNTNKLRRNRESNDNTVSISELENRLSQFHGREDTILYGSCFDANAGLFESMLTPED 792
+ E++ +L++ D V + ++ + GS A + + +
Sbjct: 151 LLESSLAQLKKKE---DCLVCPTGFAANMAAM------VAIGSVASLLAASGKPLKNEKV 201
Query: 793 AVFSDALNHASIIDGIRLCKAQK----YRYPHRDLTELEHLLAHSEARIKLIVTDGVFSM 848
A+FSDALNHASIIDG+RL + Q + Y H D+ L LL++ + + K++VTD +FSM
Sbjct: 202 AIFSDALNHASIIDGVRLAERQGNVEVFVYRHCDMYHLNSLLSNCKMKRKVVVTDSLFSM 261
Query: 849 DGTVAPIKGLRDLADKYRALLVVDDSHAXXXXXXXXXXXXXYCGVMGAADIICSTLGKAV 908
DG AP++ L L KY LLV+DD+H D+ TL KA
Sbjct: 262 DGDFAPMEELSQLRKKYGFLLVIDDAHGTFVCGENGGGVAEEFNCEADVDLCVGTLSKA- 320
Query: 909 SGAAGGYTTGPKELVTLLRNVSRPYLFSNXXXXXXXXXSLKSLDLVERSGELRQRLRQNT 968
+G GG+ K+ L+++ R ++FS + ++ + + R+ + +
Sbjct: 321 AGCHGGFIACSKKWKQLIQSRGRSFIFSTAIPVPMAAAAYAAVVVARKEIWRRKAIWERV 380
Query: 969 TAFREGLKAAGLTVAGDDHPICPVMVGEASLAVDLASGMLERGVYVVAFSYPVVPKGAAR 1028
F+E +G+ ++ PI ++VG A+ + +L+ G +V+A P VP + R
Sbjct: 381 KEFKE---LSGVDISS---PIISLVVGNQEKALKASRYLLKSGFHVMAIRPPTVPPNSCR 434
Query: 1029 VRVQLSAAHSSGDVTRAVQAFA 1050
+RV LSAAH++ DV + + A +
Sbjct: 435 LRVTLSAAHTTEDVKKLITALS 456
>At5g04620.1 68418.m00465 aminotransferase class I and II family
protein similar to 8-amino-7-oxononanoate synthase,
Bacillus sphaericus, PIR:JQ0512 [SP|P22806], Bacillus
subtilis [SP|P53556]; contains Pfam protile PF00155
aminotransferase, classes I and II
Length = 343
Score = 138 bits (333), Expect = 2e-32
Identities = 96/312 (30%), Positives = 156/312 (50%), Gaps = 25/312 (8%)
Query: 757 LENRLSQFHGREDTILYGSCFDANA------GLFESMLTPED--------AVFSDALNHA 802
LE+ L+Q +ED ++ + F AN G S+L A+FSDALNHA
Sbjct: 19 LESSLAQLKKKEDCLVCPTGFAANMAAMVAIGSVASLLAASGKPLKNEKVAIFSDALNHA 78
Query: 803 SIIDGIRLCKAQK----YRYPHRDLTELEHLLAHSEARIKLIVTDGVFSMDGTVAPIKGL 858
SIIDG+RL + Q + Y H D+ L LL++ + + K++VTD +FSMDG AP++ L
Sbjct: 79 SIIDGVRLAERQGNVEVFVYRHCDMYHLNSLLSNCKMKRKVVVTDSLFSMDGDFAPMEEL 138
Query: 859 RDLADKYRALLVVDDSHAXXXXXXXXXXXXXYCGVMGAADIICSTLGKAVSGAAGGYTTG 918
L KY LLV+DD+H D+ TL KA +G GG+
Sbjct: 139 SQLRKKYGFLLVIDDAHGTFVCGENGGGVAEEFNCEADVDLCVGTLSKA-AGCHGGFIAC 197
Query: 919 PKELVTLLRNVSRPYLFSNXXXXXXXXXSLKSLDLVERSGELRQRLRQNTTAFREGLKAA 978
K+ L+++ R ++FS + ++ + + R+ + + F+E +
Sbjct: 198 SKKWKQLIQSRGRSFIFSTAIPVPMAAAAYAAVVVARKEIWRRKAIWERVKEFKE---LS 254
Query: 979 GLTVAGDDHPICPVMVGEASLAVDLASGMLERGVYVVAFSYPVVPKGAARVRVQLSAAHS 1038
G+ ++ PI ++VG A+ + +L+ G +V+A P VP + R+RV LSAAH+
Sbjct: 255 GVDISS---PIISLVVGNQEKALKASRYLLKSGFHVMAIRPPTVPPNSCRLRVTLSAAHT 311
Query: 1039 SGDVTRAVQAFA 1050
+ DV + + A +
Sbjct: 312 TEDVKKLITALS 323
>At5g23670.1 68418.m02775 serine C-palmitoyltransferase (LCB2)
identical to serine palmitoyltransferase [Arabidopsis
thaliana] GI:9309380; similar to serine
palmitoyltransferase from Solanum tuberosum [GI:4995890],
Homo sapiens [SP|O15270], Mus musculus [SP|P97363];
contains Pfam profile PF00155: aminotransferase, classes
I and II
Length = 489
Score = 128 bits (308), Expect = 3e-29
Identities = 84/327 (25%), Positives = 158/327 (48%), Gaps = 20/327 (6%)
Query: 751 TVSI-SELENRLSQFHGREDTILYGSCFDANAGLFESMLTPEDAVFSDALNHASIIDGIR 809
T S+ +ELE +++F G+ +++G + N+ + ++ + SD+LNH+SI++G R
Sbjct: 144 TTSVHAELEECVTRFVGKPAAVVFGMGYATNSAIIPVLIGKGGLIISDSLNHSSIVNGAR 203
Query: 810 LCKAQKYRYPHRDLTELEHLL----------AHSEARIKLIVTDGVFSMDGTVAPIKGLR 859
A + H + LE +L H + ++V +G++SM+G + + +
Sbjct: 204 GSGATIRVFQHNTPSHLERVLREQIAEGQPRTHRPWKKIIVVVEGIYSMEGEICHLPEVV 263
Query: 860 DLADKYRALLVVDDSHAXXXXXXXXXXXXXYCGVMGA-ADIICSTLGKAVSGAAGGYTTG 918
+ KY+A + +D++H+ GV A D++ T K+ G+ GGY G
Sbjct: 264 AICKKYKAYVYLDEAHSIGAIGKTGKGICELLGVDTADVDVMMGTFTKSF-GSCGGYIAG 322
Query: 919 PKELVTLLRNVSRPYLFSNXXXXXXXXXSLKSLDLV------ERSGELRQRLRQNTTAFR 972
KEL+ L++ +L++ + ++ ++ R + R+R+N+ FR
Sbjct: 323 SKELIQYLKHQCPAHLYATSIPTPSAQQIISAIKVILGEDGSNRGAQKLARIRENSNFFR 382
Query: 973 EGLKAAGLTVAGD-DHPICPVMVGEASLAVDLASGMLERGVYVVAFSYPVVPKGAARVRV 1031
L+ G V GD D P+ P+M+ + + L + V VV +P P AR R+
Sbjct: 383 AELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLRQKVAVVVVGFPATPLLLARARI 442
Query: 1032 QLSAAHSSGDVTRAVQAFAEVAKNVGI 1058
+SA+HS D+ RA++ ++V GI
Sbjct: 443 CISASHSREDLIRALKVISKVGDLSGI 469
Score = 31.5 bits (68), Expect = 3.1
Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Query: 680 LNFCANNYLGLSNHPEV-VEAAREGLKKYGAGLSSVRFICGTQSIH 724
LN + NYLG + E E LKK+ A S R GT S+H
Sbjct: 103 LNLGSYNYLGFGSFDEYCTPRVIESLKKFSASTCSSRVDAGTTSVH 148
>At3g48780.1 68416.m05327 serine C-palmitoyltransferase, putative
similar to serine palmitoyltransferase from Solanum
tuberosum [GI:4995890], Homo sapiens [SP|O15270], Mus
musculus [SP|P97363]
Length = 489
Score = 124 bits (300), Expect = 2e-28
Identities = 80/327 (24%), Positives = 154/327 (47%), Gaps = 20/327 (6%)
Query: 751 TVSI-SELENRLSQFHGREDTILYGSCFDANAGLFESMLTPEDAVFSDALNHASIIDGIR 809
T S+ +ELE+ ++++ G+ +++G + N+ + ++ + SD+LNH SI++G R
Sbjct: 144 TTSVHAELEDCVAKYVGQPAAVIFGMGYATNSAIIPVLIGKGGLIISDSLNHTSIVNGAR 203
Query: 810 LCKAQKYRYPHRDLTELEHLL----------AHSEARIKLIVTDGVFSMDGTVAPIKGLR 859
A + H LE +L H + ++V +G++SM+G + + +
Sbjct: 204 GSGATIRVFQHNTPGHLEKVLKEQIAEGQPRTHRPWKKIIVVVEGIYSMEGEICHLPEIV 263
Query: 860 DLADKYRALLVVDDSHAXXXXXXXXXXXXXYCGV-MGAADIICSTLGKAVSGAAGGYTTG 918
+ KY+A + +D++H+ GV DI+ T K+ G+ GGY G
Sbjct: 264 SICKKYKAYVYLDEAHSIGAIGKTGRGVCELLGVDTSDVDIMMGTFTKSF-GSCGGYIAG 322
Query: 919 PKELVTLLRNVSRPYLFSNXXXXXXXXXSLKSLDLV------ERSGELRQRLRQNTTAFR 972
K+L+ L++ +L++ + ++ ++ R + R+R+N+ FR
Sbjct: 323 SKDLIQYLKHQCPAHLYATSISTPSATQIISAIKVILGEDGSNRGAQKLARIRENSNFFR 382
Query: 973 EGLKAAGLTVAGD-DHPICPVMVGEASLAVDLASGMLERGVYVVAFSYPVVPKGAARVRV 1031
L+ G V GD D P+ P+M+ + + L + VV +P P AR R+
Sbjct: 383 AELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLRENLAVVVVGFPATPLLLARARI 442
Query: 1032 QLSAAHSSGDVTRAVQAFAEVAKNVGI 1058
+SA+HS D+ +A+Q ++ GI
Sbjct: 443 CISASHSREDLIKALQVISKAGDLTGI 469
Score = 31.5 bits (68), Expect = 3.1
Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Query: 680 LNFCANNYLGLSNHPEV-VEAAREGLKKYGAGLSSVRFICGTQSIH 724
LN + NYLG + E E LKK+ A S R GT S+H
Sbjct: 103 LNLGSYNYLGFGSFDEYCTPRVIESLKKFSASTCSSRVDAGTTSVH 148
>At3g48790.1 68416.m05328 serine C-palmitoyltransferase, putative
similar to serine palmitoyltransferase from Solanum
tuberosum [GI:4995890], Homo sapiens [SP|O15270], Mus
musculus [SP|P97363]
Length = 350
Score = 121 bits (292), Expect = 2e-27
Identities = 81/316 (25%), Positives = 150/316 (47%), Gaps = 16/316 (5%)
Query: 756 ELENRLSQFHGREDTILYGSCFDANAGLFESMLTPEDAVFSDALNHASIIDGIRLCKAQK 815
ELE +++F G+ +++G + N+ + ++ + SD+LNH SII+G R A
Sbjct: 14 ELEECVAKFVGKPAAVVFGMGYLTNSAIISVLIGKGGLIISDSLNHTSIINGARGSGATI 73
Query: 816 YRYPHRDLTELEHLL-----AHSEARIKLIVTDGVFSMDGTVAPIKGLRDLADKYRALLV 870
+ H L EH++ H + ++V +G++SM+G + + + + +Y+A +
Sbjct: 74 RVFQHNILK--EHIIEGQPRTHRPWKKIIVVVEGIYSMEGEICDLPEIVSVCSEYKAYVY 131
Query: 871 VDDSHAXXXXXXXXXXXXXYCGV-MGAADIICSTLGKAVSGAAGGYTTGPKELVTLLRNV 929
+D++H+ GV DI+ T K++ G+ GGY G K+LV L+
Sbjct: 132 LDEAHSIGAIGKTGRGVCELLGVDTTEVDIMMGTFTKSL-GSCGGYIAGSKDLVQYLKQH 190
Query: 930 SRPYLFSNXXXXXXXXXSLKSLDLV-----ERSGELR-QRLRQNTTAFREGLKAAGLTVA 983
+L++ + ++ ++ GEL+ R+R+N+ FR L+ G V
Sbjct: 191 YPAHLYATSISTPAAQQVISAIKVIFGVDGSNRGELKLARIRENSNFFRAELQKMGFKVL 250
Query: 984 G-DDHPICPVMVGEASLAVDLASGMLERGVYVVAFSYPVVPKGAARVRVQLSAAHSSGDV 1042
G D PI P+M+ + + L + +V S+P +P AR R+ SA+H D+
Sbjct: 251 GVYDSPIMPIMLYNPAKIAAFSRECLRENLAIVVVSFPPIPLLLARARICNSASHLREDL 310
Query: 1043 TRAVQAFAEVAKNVGI 1058
+A+Q + GI
Sbjct: 311 IKALQVISRAGDLTGI 326
>At4g36480.1 68417.m05180 aminotransferase class I and II family
protein similar to Serine palmitoyltransferase 1 (EC
2.3.1.50) from Homo sapiens [SP|O15269], Mus musculus
[SP|O35704], Cricetulus griseus [SP|O54695]
Length = 482
Score = 87.8 bits (208), Expect = 3e-17
Identities = 98/422 (23%), Positives = 183/422 (43%), Gaps = 55/422 (13%)
Query: 657 KHER-VLTSPQDTKVRVQGAQGEFLNFCANNYLGLSNHPEVVEAAREGLKKYGAGLSSVR 715
KHE VL S V G + +NF + NYLGL H +++E+ L+KY G+ S
Sbjct: 90 KHEPPVLESAAGPHTTVNGK--DVVNFASANYLGLIGHEKLLESCTSALEKY--GVGS-- 143
Query: 716 FICGTQSIHKGYKFVNLIGENNTNKLRRNRESNDNTVSISELENRLSQFHGREDTILYGS 775
CG + + G V+L + E R+S+F G D+ILY
Sbjct: 144 --CGPRGFY-GTIDVHL-----------------------DCETRISKFLGTPDSILYSY 177
Query: 776 CFDANAGLFESMLTPEDAVFSDALNHASIIDGIRLCKAQKYRYPHRDLTELEHLLAHSEA 835
D + +D H I +G++L ++ + H D+ L L
Sbjct: 178 GLSTMFSTIPCFCKKGDVIVADEGVHWGIQNGLQLSRSTIVYFKHNDMESLRITLEKIMT 237
Query: 836 RIK-------LIVTDGVFSMDGTVAPIKGLRDLADKYRALLVVDDSHAXXXXXXXXXXXX 888
+ K IV + V+ G +AP+ + L +KYR +++D+S++
Sbjct: 238 KYKRSKNLRRYIVAEAVYQNSGQIAPLDEIVKLKEKYRFRVILDESNSFGVLGRSGRGLA 297
Query: 889 XYCGV-MGAADIICSTLGKAVSGAAGGYTTGPKELVTLLRNVSRPYLFSNXXXXXXXXXS 947
+ V + D++ + +G A++ GG+ TG ++ R S Y+FS +
Sbjct: 298 EHHSVPIEKIDVVTAAMGHALA-TEGGFCTGNARIIDYQRLSSSGYVFSASLPPYLASAA 356
Query: 948 LKSLDLVERSGELRQRLRQNTTAFREGLK-AAGLTVAGD-DHPICPVMVGEAS------- 998
+ ++D+++++ ++ +L+QN +GL G+++ + + PI + + ++S
Sbjct: 357 ITAIDVIDQNPDMLVKLKQNVALLWKGLSDIKGMSLTSNRESPIVFLKLEKSSGSAKDDL 416
Query: 999 -LAVDLASGML-ERGVYVVAFSYPVVPKGAARVRVQL--SAAHSSGDVTRAVQAFAEVAK 1054
L +A L E + VV+ + K V ++L SA HS D+ +A ++ +A
Sbjct: 417 LLLEKMADRALKEDSLLVVSSKRSFLDKCRLPVGIKLYVSAGHSESDLLKASESLKRLAS 476
Query: 1055 NV 1056
+
Sbjct: 477 EL 478
>At1g69830.1 68414.m08034 alpha-amylase, putative /
1,4-alpha-D-glucan glucanohydrolase, putative similar to
SP|P17859 Alpha-amylase precursor (EC 3.2.1.1)
(1,4-alpha-D-glucan glucanohydrolase) {Vigna mungo},
alpha-amylase [Malus x domestica] GI:7532799; contains
Pfam profile PF00128: Alpha amylase, catalytic domain
Length = 887
Score = 33.5 bits (73), Expect = 0.76
Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 9/71 (12%)
Query: 104 LGPRGFGGIQISPPNENVVLWTYNRPWWERYQPIS-YELVTRSGNERQFADMVRRCNAAG 162
L GF + + PP E+V P E Y P Y L +R G + D V++ + G
Sbjct: 523 LASLGFTVLWLPPPTESV------SP--EGYMPKDLYNLNSRYGTIDELKDTVKKFHKVG 574
Query: 163 VRIYVDAVINH 173
+++ DAV+NH
Sbjct: 575 IKVLGDAVLNH 585
>At1g16960.1 68414.m02059 expressed protein
Length = 114
Score = 32.3 bits (70), Expect = 1.8
Identities = 12/37 (32%), Positives = 24/37 (64%)
Query: 635 GVAKLRDVLEDRLQEIKRAKTWKHERVLTSPQDTKVR 671
G + R + E + ++I+R KTWKH + ++ + T++R
Sbjct: 2 GCSSSRTIAEGKKEKIRRPKTWKHPQPISRDELTQMR 38
>At5g03010.1 68418.m00247 kelch repeat-containing protein contains
Pfam PF01344: Kelch motif (1 repeat)
Length = 232
Score = 31.9 bits (69), Expect = 2.3
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 450 YSMVAFRNVAGNTDVVEWWDNGSNQIAFCRGTKAFIAFNNDR 491
Y +V+ N AG V WW +G + GT+ + + N R
Sbjct: 146 YQLVSVANAAGGGRVTVWWKSGLKVLDLLSGTETWECYTNIR 187
>At1g22930.1 68414.m02866 T-complex protein 11 contains Pfam
PF05794: T-complex protein 11
Length = 1131
Score = 31.9 bits (69), Expect = 2.3
Identities = 16/36 (44%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Query: 621 QVRHL-HEVKRQERAGVAKLRDVLEDRLQEIKRAKT 655
QVRH+ + V Q +K+RD LED+LQ KR ++
Sbjct: 222 QVRHVANSVSNQREIERSKMRDKLEDKLQRAKRYRS 257
>At4g25000.1 68417.m03587 alpha-amylase, putative /
1,4-alpha-D-glucan glucanohydrolase, putative similar to
alpha-amylase from Vigna mungo SP|P17859, Ipomoea nil
GI:21670851; contains Pfam profile PF00128: Alpha
amylase, catalytic domain
Length = 423
Score = 31.1 bits (67), Expect = 4.1
Identities = 11/35 (31%), Positives = 20/35 (57%)
Query: 143 TRSGNERQFADMVRRCNAAGVRIYVDAVINHMTGE 177
++ G+E + +++ N G++ D VINH T E
Sbjct: 87 SKYGSEAELKSLIKALNQKGIKALADIVINHRTAE 121
>At1g76130.1 68414.m08841 alpha-amylase, putative /
1,4-alpha-D-glucan glucanohydrolase, putative strong
similarity to alpha-amylase GI:7532799 from [Malus x
domestica];contains Pfam profile PF00128: Alpha amylase,
catalytic domain
Length = 413
Score = 31.1 bits (67), Expect = 4.1
Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 11/91 (12%)
Query: 87 HLFEWKWNDIADECERFLGPRGFGGIQISPPNENVVLWTYNRPWWERYQPIS-YELVTRS 145
H ++W W ++ + + GF + PP++++ P E Y P Y L +
Sbjct: 37 HKYDW-WRNLDGKVPD-IAKSGFTSAWLPPPSQSLA------P--EGYLPQDLYSLNSAY 86
Query: 146 GNERQFADMVRRCNAAGVRIYVDAVINHMTG 176
G+E ++R+ VR D VINH G
Sbjct: 87 GSEHLLKSLLRKMKQYKVRAMADIVINHRVG 117
>At3g51250.1 68416.m05610 senescence/dehydration-associated
protein-related similar to senescence-associated protein
12 [Hemerocallis hybrid cultivar]
gi|3551958|gb|AAC34857; similar to early-responsive to
dehydration stress ERD7 protein [Arabidopsis thaliana]
gi|15320412|dbj|BAB63916
Length = 463
Score = 30.7 bits (66), Expect = 5.4
Identities = 37/135 (27%), Positives = 54/135 (40%), Gaps = 9/135 (6%)
Query: 580 GRCSPASPTPAPPFRRQRRGAPPFVAMALRSQLLRNVL--NGTQVRHL---HEVKRQERA 634
G+C+ T AP +A +L+R +L V L +EV + +
Sbjct: 245 GQCAAYWTTLAPNVEDYTHSTAKMIASG-SGKLIRGILWCGDVTVERLKKGNEVMKNRLS 303
Query: 635 GVAKLRDVLEDRLQEIKRAK--TWKHERVLTSPQDTKVRVQG-AQGEFLNFCANNYLGLS 691
K +DV + L+ IKR K T E+V T V+V G G N A L
Sbjct: 304 RAEKEKDVSPETLRRIKRVKRVTQMTEKVATGVLSGVVKVSGFITGSMANSKAGKKLFGL 363
Query: 692 NHPEVVEAAREGLKK 706
E+V A+ +G K
Sbjct: 364 LPGEIVLASLDGFSK 378
>At2g39930.1 68415.m04907 isoamylase, putative / starch debranching
enzyme, putative similar to isoamylase from [Solanum
tuberosum] GI:27728145, [Triticum aestivum] GI:17932898,
[Hordeum vulgare] GI:21314275, [Oryza sativa]
GI:3252794; contains Pfam profiles PF00128: Alpha
amylase catalytic domain, PF02922: Isoamylase N-terminal
domain
Length = 783
Score = 30.7 bits (66), Expect = 5.4
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 4/37 (10%)
Query: 713 SVRFICGTQSIHKGYKFVNLIGENNTNKLRRNRESND 749
S+ FIC H G+ +L+ NN N L E+ND
Sbjct: 530 SINFICA----HDGFTLADLVTYNNKNNLANGEENND 562
>At1g76920.1 68414.m08954 F-box family protein (FBX3) contains
similarity to stamina pistilloidia GI:4101570, the pea
ortholog of Fim and UFO from [Pisum sativum]
Length = 374
Score = 30.7 bits (66), Expect = 5.4
Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 3/65 (4%)
Query: 402 PQIMSSFLFWDSEIGPPMDHSGNIISPAINSDGTCGNGWVC--QHRWRQIYSMVAF-RNV 458
P +MSS +F ++G P + S + + WVC +H W I+ ++ R +
Sbjct: 201 PVLMSSSVFALCDVGSPWRSQWKLFSCKLTNLTITHTNWVCLEKHEWGDIFDIIKRPRLL 260
Query: 459 AGNTD 463
GN D
Sbjct: 261 RGNGD 265
>At2g31990.1 68415.m03908 exostosin family protein contains Pfam
profile: PF03016 Exostosin family
Length = 479
Score = 30.3 bits (65), Expect = 7.1
Identities = 16/33 (48%), Positives = 23/33 (69%), Gaps = 2/33 (6%)
Query: 331 LSRAFRGNNQLRWLSSWGTQWGLLAHSDSLTFI 363
+SR FR N+ R S+WGT + LL+ S +LTF+
Sbjct: 216 ISRDFRRNSGSR--SAWGTNFMLLSESLNLTFL 246
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.320 0.136 0.427
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,048,246
Number of Sequences: 28952
Number of extensions: 1069248
Number of successful extensions: 2525
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 2488
Number of HSP's gapped (non-prelim): 24
length of query: 1061
length of database: 12,070,560
effective HSP length: 89
effective length of query: 972
effective length of database: 9,493,832
effective search space: 9228004704
effective search space used: 9228004704
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 64 (29.9 bits)
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