Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001875-TA|BGIBMGA001875-PA|undefined
(687 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_0503 - 3596664-3596837,3597647-3598069,3598362-3598595,359... 96 7e-20
10_08_0322 + 16736013-16736072,16737200-16737305,16737436-167375... 31 2.3
05_07_0093 - 27648656-27648736,27649034-27649147,27649229-276492... 31 2.3
01_06_0472 - 29592383-29592457,29592720-29592840,29592971-295930... 31 2.3
07_01_0579 + 4299104-4299652,4300845-4300935,4301018-4301211,430... 31 3.1
02_01_0581 - 4307182-4307358,4307387-4307461,4307559-4307621,430... 31 3.1
11_06_0551 + 24903208-24903399,24903513-24904661,24904686-24907502 30 5.3
10_08_0944 + 21735483-21735848,21737025-21737276 30 5.3
07_03_1424 - 26474464-26474514,26474549-26474635,26474905-264750... 30 5.3
10_01_0086 - 1064650-1065379,1065796-1065950,1066029-1066141,106... 30 7.1
08_02_0381 - 16518670-16518726,16518841-16518941,16519030-165192... 30 7.1
07_03_0562 + 19535801-19535865,19535972-19536017,19536125-195362... 29 9.3
07_01_1196 - 11369673-11369693,11369737-11370270 29 9.3
05_03_0568 + 15560511-15561093,15562522-15562535 29 9.3
02_02_0181 + 7541831-7541971,7542407-7543279,7544101-7544301,754... 29 9.3
>06_01_0503 -
3596664-3596837,3597647-3598069,3598362-3598595,
3598720-3598993,3599390-3599523,3599572-3599634,
3599759-3599846,3599919-3599989,3600898-3601010,
3601836-3602004,3602580-3602671,3602819-3603295,
3603736-3604090
Length = 888
Score = 96.3 bits (229), Expect = 7e-20
Identities = 66/201 (32%), Positives = 93/201 (46%), Gaps = 19/201 (9%)
Query: 481 VEDYCIWHYINNGTYTHGDHWEGRIITTIFFLLFWDIIYSKPAHAPGIFLSRYQRYPLDL 540
VE + +Y + G G H EG I TIF LL WD I+S P +F +++Q PLDL
Sbjct: 640 VEQLALQYYADEGGGWRGTHSEGGIWMTIFGLLMWDAIFSD---VPDVFQTKFQTAPLDL 696
Query: 541 YCDSFYTNRKSEIDERLSSLAAGSAEDMLEAMRRVWDSRPEGELSGLTRSIEWDR----- 595
D FY +RK I+ +L + G AE++L + W+ +G R + WDR
Sbjct: 697 ETDEFYRSRKDLIESQLKKIQDGIAEEILISS---WELH-QGT---SCRGVNWDRHSLTD 749
Query: 596 IEMVAGCLGPRRVGALCERLATNYGHAHSGFPDLTLWNAHTK----TITFMEVKSDSDRP 651
+ C G R+ +L LA +Y SG PDL LW + +EVK D+
Sbjct: 750 LRAAVVCTGGHRLASLLRHLALDYRSWSSGMPDLLLWRFLDERGGGEAKLVEVKGPRDQL 809
Query: 652 SVKQLQWMHYLQQRGLRTAFC 672
S +Q W+ L G C
Sbjct: 810 SEQQRAWILVLMDFGFDVEVC 830
>10_08_0322 +
16736013-16736072,16737200-16737305,16737436-16737584,
16738344-16738596,16738928-16739037,16739302-16739376,
16739477-16739563,16739754-16739840,16740021-16740158,
16740438-16740503
Length = 376
Score = 31.5 bits (68), Expect = 2.3
Identities = 29/118 (24%), Positives = 51/118 (43%), Gaps = 5/118 (4%)
Query: 102 KRSPVKKNLARDSFGCLENDNSIDHVFKAASDGMDDKNTCKLNFHEITSKLKADELKQIC 161
+R PVK ++ R S G ND + D V + + L + + SKL++ K+
Sbjct: 67 RRRPVKVSVKRSSSGAESNDKAYDSVLRKRQKVLSVVFLVVLPYFK--SKLQSIYNKERE 124
Query: 162 KELNIKVQSKQSAIKLLEN--YSNQSSISKFFIQAKENPTNNKTRLLEIFKKKLGSCY 217
L + Q ++ E S+Q S+ ++A +N R+ + F +G CY
Sbjct: 125 ARLQASLWG-QGDVRFDEADLVSDQGETSQAQVEATTGEVSNMARIKKNFAALIGVCY 181
>05_07_0093 -
27648656-27648736,27649034-27649147,27649229-27649288,
27649464-27649687,27649799-27649886,27650326-27650532,
27650566-27650784,27650903-27651001,27651439-27651504,
27651654-27651737,27651829-27651888,27652041-27652325,
27652789-27652836,27652988-27653034,27653442-27653556,
27653958-27654032,27654227-27654298,27654944-27656124,
27656613-27656757
Length = 1089
Score = 31.5 bits (68), Expect = 2.3
Identities = 29/106 (27%), Positives = 46/106 (43%), Gaps = 4/106 (3%)
Query: 23 KTLKNEYTNSIVNICPKAE-TSSRFPSPERENCKTETLIDSIKSEISP--TTPRKSPKSF 79
++ E S V+ ++E T S PS + E + T K+E+S TP K+PKS
Sbjct: 97 QSASTEAPTSKVDASEESESTQSPKPSEQGETLISSTEPPVSKAEVSEQLATP-KTPKSL 155
Query: 80 GSQGSGSKDKFYSPNKKRAVLKKRSPVKKNLARDSFGCLENDNSID 125
+ SP K +SP + A ++ G E N+I+
Sbjct: 156 SATEEKPSHSTESPTYKGDSEAPQSPTDPSTAEENSGSTETGNTIE 201
>01_06_0472 -
29592383-29592457,29592720-29592840,29592971-29593056,
29593224-29593310,29593493-29593573,29593656-29593803,
29593987-29594054,29594145-29594402
Length = 307
Score = 31.5 bits (68), Expect = 2.3
Identities = 21/91 (23%), Positives = 40/91 (43%), Gaps = 1/91 (1%)
Query: 283 FEKYLDA-HYIYEKYIIETDDKVKCILVETVYEMYKKIDKEDMIRYTSLPEWLRRYTPPY 341
F++ DA Y +Y+ DD+ L + E+ + + W+ Y P Y
Sbjct: 107 FDESSDALFYSAPRYVTHIDDQAIEALTKYYSEVLPPSNTPGVAILDMCSSWVSHYPPGY 166
Query: 342 IFVKILGEGIQSLKRNKSDVSSNFAVEILSV 372
KI+G G+ + ++ V + + V+ L+V
Sbjct: 167 KQEKIVGMGMNEDELKRNPVLTEYVVQDLNV 197
>07_01_0579 +
4299104-4299652,4300845-4300935,4301018-4301211,
4301501-4301622,4302378-4302856,4303033-4303334
Length = 578
Score = 31.1 bits (67), Expect = 3.1
Identities = 21/95 (22%), Positives = 46/95 (48%), Gaps = 5/95 (5%)
Query: 404 EVDDAKDAMRPQAVKISKQ-KTNLGNKLRIILNEIANENIKLEK----DLSAEHLHKNPM 458
EV D +A+R +A + ++ +G L+ + + ++++EK + E L +
Sbjct: 400 EVADVSEAVRQRADALMLSGESAMGRYPEKALSVLRSVSLRIEKWWREEKRHEELELKDV 459
Query: 459 DNWYKGKLKYEVCIDGIRQAIEVEDYCIWHYINNG 493
+ + K+ E+CI + A ++E ++ Y N G
Sbjct: 460 SSSFSDKISEEICISAAKMANKLEVDAVFVYTNTG 494
>02_01_0581 -
4307182-4307358,4307387-4307461,4307559-4307621,
4307715-4307819,4307917-4308024,4308123-4308260,
4308357-4308446,4308533-4308658,4308728-4308781,
4308865-4308936,4309060-4309167,4309272-4309343,
4309456-4309518,4309747-4309908
Length = 470
Score = 31.1 bits (67), Expect = 3.1
Identities = 20/83 (24%), Positives = 40/83 (48%), Gaps = 4/83 (4%)
Query: 118 LENDNSIDHVFKAASDGMDDKNTCKLNFHEITSK----LKADELKQICKELNIKVQSKQS 173
+END+ D + +A++D NT E+T++ + A +L C +L++ ++
Sbjct: 272 IENDDDCDVIEEASTDSDSSHNTEVKETEEMTAETDRFINAFQLIARCSDLDLSGLFQEQ 331
Query: 174 AIKLLENYSNQSSISKFFIQAKE 196
KL + Q + K + AK+
Sbjct: 332 KTKLASPHPVQETFDKIKVAAKD 354
>11_06_0551 + 24903208-24903399,24903513-24904661,24904686-24907502
Length = 1385
Score = 30.3 bits (65), Expect = 5.3
Identities = 34/135 (25%), Positives = 55/135 (40%), Gaps = 12/135 (8%)
Query: 239 GYSIIREKRLELTLLYEKINRETFPIIENRDIDDASVVFKNRKEFEKYLDAHYIYEKYII 298
GYSI R +E ++ I +E +P S + + F+ +D IY I
Sbjct: 679 GYSIRRSTLVECWVVEGLITKEDWP----------SAIHHAERCFDTLIDRWLIYPNDIG 728
Query: 299 ETDDKVKCILVETVYEMYKKIDKEDMIRYTSLPEWLRRYTPPYIFVKILGEGIQSLKRNK 358
CI+ V+E KI K+ I L L R+ IF ++ G + R
Sbjct: 729 AAGKIKSCIVGNLVHEFITKIAKKQHIVEPRLSHHLARHFS--IFNELQLRGSDRIDRFF 786
Query: 359 SDVSSNFAVEILSVL 373
++S + + +L VL
Sbjct: 787 KNLSKSSQLSMLKVL 801
>10_08_0944 + 21735483-21735848,21737025-21737276
Length = 205
Score = 30.3 bits (65), Expect = 5.3
Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 54 CKTETLIDSIKSEISPTTPRKSPKSFGSQGSGSKDKFYSPNKKRAVLKKRSPVKKNLAR 112
CK + L+D + PTTP + G+Q S +Y+P +++A + +K L R
Sbjct: 101 CKFDDLLDVFWARHDPTTPNRQGNDVGTQ-YRSGIYYYTPEQEKAARESLEKQQKLLNR 158
>07_03_1424 - 26474464-26474514,26474549-26474635,26474905-26475006,
26475149-26475260,26475405-26475463,26475559-26475633,
26475734-26475832,26476128-26476343,26476426-26476500,
26476583-26476670,26476757-26476902,26477240-26477347,
26477417-26478436,26478437-26478715,26479471-26480520,
26480636-26480692,26480780-26480837,26481379-26481458,
26481598-26481654,26481764-26481833,26481967-26482202,
26482341-26482445,26482534-26482680,26482758-26482823,
26482916-26482979,26484040-26484200,26484308-26484400,
26484487-26484600,26484684-26484803,26484893-26484976,
26485061-26485216,26485389-26485811
Length = 1885
Score = 30.3 bits (65), Expect = 5.3
Identities = 36/176 (20%), Positives = 74/176 (42%), Gaps = 14/176 (7%)
Query: 98 AVLKKRSPVKKNLARDSFGCLENDNSIDHVFKAASDGMDDKNTCKLNFHEITSKLKADEL 157
++LK++ +++ LA + L + ++H +S+ + N K+ E + E
Sbjct: 1343 SILKQQKVLEEELAENGAALLILRSELEHSESLSSELFKENNNLKVMLEE--EAMMISET 1400
Query: 158 KQICKELNIKVQSKQSAIKLLENYSNQSSISKFFIQAKENPTNNKTRLLEIFKKKL-GSC 216
K + ++ + ++ + I LL N S + Q KE N+ +++ I K L
Sbjct: 1401 KAMLEDKSKVIEGLEHEILLL----NSSEEGRLMSQIKE--LNDNLKIISIDKGNLEEEI 1454
Query: 217 YKLTEKARSXXXXXXXXXXXGMGYSIIREKRLELTLLYEKINRETFPIIENRDIDD 272
KLT+K SI + E++ +Y + E I+E R +++
Sbjct: 1455 LKLTDKLEMAVALAEENEAA----SIEARQAAEISKVYAEEKEEEVRILE-RSVEE 1505
>10_01_0086 -
1064650-1065379,1065796-1065950,1066029-1066141,
1066238-1066345,1066773-1066890,1066996-1067069,
1067595-1067690,1068062-1068455
Length = 595
Score = 29.9 bits (64), Expect = 7.1
Identities = 13/30 (43%), Positives = 16/30 (53%), Gaps = 3/30 (10%)
Query: 483 DYCIWHYINNGTYTHGDH---WEGRIITTI 509
DYC+ N G Y+H H W GR I T+
Sbjct: 292 DYCVIDIFNEGDYSHPHHHPPWYGRPICTL 321
>08_02_0381 -
16518670-16518726,16518841-16518941,16519030-16519200,
16519498-16519672,16519787-16519887,16520247-16520358,
16520522-16521055,16521966-16522056,16523403-16523590,
16523676-16523960
Length = 604
Score = 29.9 bits (64), Expect = 7.1
Identities = 14/54 (25%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Query: 144 NFHEITSKLKADELKQICKELNIKVQSKQSAIKLLENYSNQSSISKFFIQAKEN 197
NFHEIT K+ L ++ + + ++ +++LL+N+ Q + F+ + N
Sbjct: 295 NFHEITDKISV--LSEMVESSAVIGPMREESLRLLKNFQEQIDSWEHFVATQMN 346
>07_03_0562 +
19535801-19535865,19535972-19536017,19536125-19536223,
19536588-19536674,19537545-19537613,19537702-19538710,
19539217-19539365,19539453-19540487,19540488-19541003
Length = 1024
Score = 29.5 bits (63), Expect = 9.3
Identities = 36/169 (21%), Positives = 64/169 (37%), Gaps = 14/169 (8%)
Query: 45 RFPSPERENCKTETLIDS---IKSEISPTTPRKSPK-SFGSQGSG---SKDKFYSPNKKR 97
+F E TE LI S I+ S P K P + G K++ PN K
Sbjct: 133 KFQELRDEGIPTENLIKSEQKIRPHPSNREPIKKPVLRYSDDDLGFMSHKEQVSRPNSKD 192
Query: 98 AV--LKKRSPVKKNLARDSFGCLENDNSIDHVFKAASDGMDDKNTCKLNFHEITSKLKAD 155
K + VKK ++R+S L + + V K++ DD + ++ + +
Sbjct: 193 LEDDRKFKDQVKKTISRNSEDVLSSSFQKERVKKSSVRNSDDDLSSSFQKEQVKRPISRN 252
Query: 156 ELKQICKELNIKVQSKQSAIKLLENYSNQSSISKFFIQAKENPTNNKTR 204
I + K+ K++ S ++ F Q + PT+ ++
Sbjct: 253 SGDDISSSFH-----KEQGRKVISRNSENDRVASFHKQHDKRPTSRSSK 296
>07_01_1196 - 11369673-11369693,11369737-11370270
Length = 184
Score = 29.5 bits (63), Expect = 9.3
Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 3/39 (7%)
Query: 553 IDERLSS--LAAGSAEDMLEAMRRVWDSRPEGELSGLTR 589
ID+ L L+AG EDM++AM VW + + E GLTR
Sbjct: 133 IDKHLEPERLSAGVQEDMVDAMVMVWREQKD-EAFGLTR 170
>05_03_0568 + 15560511-15561093,15562522-15562535
Length = 198
Score = 29.5 bits (63), Expect = 9.3
Identities = 22/90 (24%), Positives = 39/90 (43%), Gaps = 5/90 (5%)
Query: 4 NSAGSKKRFSLSLANGPPVKTLKNEYTNSIVNICPKAETSSRFPSPERENCKTETLIDSI 63
++A +K + + S ++ + + + + + +I PK S PSP R + S
Sbjct: 68 SAAAAKAKLAKSTSSKRLLCSSSRQAASFVHSIIPKLRRSHTMPSPMRSSASATAAAASD 127
Query: 64 KSEISPTTPRK----SPK-SFGSQGSGSKD 88
++ PRK SP+ SF S G D
Sbjct: 128 GEQVQCGAPRKRLVASPRSSFSSTSRGDDD 157
>02_02_0181 +
7541831-7541971,7542407-7543279,7544101-7544301,
7544358-7544595,7545732-7545922
Length = 547
Score = 29.5 bits (63), Expect = 9.3
Identities = 23/100 (23%), Positives = 41/100 (41%), Gaps = 6/100 (6%)
Query: 483 DYCIWH--YINNGTYTHGDHWEGRIITTIFFLLFWDIIYSKPAHAPG--IFLSRYQ--RY 536
D+ WH + +NG Y D + I + WD+ A I ++ Y R
Sbjct: 119 DHEEWHKGFGHNGDYFPEDEFNWEIDEENKEMTMWDVFSEMVVAAKDKVISVASYDLGRR 178
Query: 537 PLDLYCDSFYTNRKSEIDERLSSLAAGSAEDMLEAMRRVW 576
+ + F+ ++ + L+ AG A ++LE R +W
Sbjct: 179 GMSMLSKFFFQEAWKDMAQTLADANAGIANELLETERTIW 218
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.317 0.134 0.395
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,496,154
Number of Sequences: 37544
Number of extensions: 813125
Number of successful extensions: 2092
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 2087
Number of HSP's gapped (non-prelim): 17
length of query: 687
length of database: 14,793,348
effective HSP length: 87
effective length of query: 600
effective length of database: 11,527,020
effective search space: 6916212000
effective search space used: 6916212000
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 63 (29.5 bits)
- SilkBase 1999-2023 -