Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001875-TA|BGIBMGA001875-PA|undefined
(687 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_6581| Best HMM Match : HEAT (HMM E-Value=3e-05) 37 0.062
SB_17409| Best HMM Match : FlgM (HMM E-Value=1.2e-23) 36 0.11
SB_12316| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.58
SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.76
SB_37360| Best HMM Match : ETS_PEA3_N (HMM E-Value=0.65) 33 1.0
SB_25257| Best HMM Match : Pkinase (HMM E-Value=4e-10) 33 1.0
SB_18945| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 1.0
SB_39048| Best HMM Match : RVT_1 (HMM E-Value=1.9e-23) 32 1.3
SB_32489| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 1.3
SB_34096| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 1.8
SB_48438| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.3
SB_43805| Best HMM Match : YscO (HMM E-Value=6) 31 2.3
SB_53556| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 3.1
SB_31407| Best HMM Match : TolA (HMM E-Value=2.5) 31 3.1
SB_3887| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 3.1
SB_21261| Best HMM Match : APSES (HMM E-Value=2.3) 31 3.1
SB_10624| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 3.1
SB_29861| Best HMM Match : RRM_1 (HMM E-Value=1.10002e-42) 31 4.1
SB_54| Best HMM Match : Actin (HMM E-Value=0) 31 4.1
SB_41259| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 5.4
SB_7843| Best HMM Match : DUF740 (HMM E-Value=0.5) 30 5.4
SB_1298| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 5.4
SB_43064| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 7.1
SB_18984| Best HMM Match : DNA_topoisoIV (HMM E-Value=0) 30 7.1
SB_40414| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 7.1
SB_27684| Best HMM Match : DUF1660 (HMM E-Value=3.8) 30 7.1
SB_26685| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 7.1
SB_47268| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 9.4
SB_28495| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 9.4
SB_22450| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 9.4
SB_7965| Best HMM Match : Galactosyl_T (HMM E-Value=0.2) 29 9.4
SB_40852| Best HMM Match : SURF6 (HMM E-Value=3.8) 29 9.4
SB_37874| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 9.4
SB_34550| Best HMM Match : VWA (HMM E-Value=0) 29 9.4
SB_29805| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 9.4
SB_5677| Best HMM Match : fn3 (HMM E-Value=0.0092) 29 9.4
>SB_6581| Best HMM Match : HEAT (HMM E-Value=3e-05)
Length = 1188
Score = 36.7 bits (81), Expect = 0.062
Identities = 41/154 (26%), Positives = 66/154 (42%), Gaps = 9/154 (5%)
Query: 30 TNSIVNICPKAETSSRFPSPE-RENCKTETLIDSIK-SEISPTTPRKSPKSFGSQGSGSK 87
T + N K E + F +P R+N L DS S + + + G + SG+K
Sbjct: 542 TAQLANFHLKREDEAIFSTPAFRKNEDLILLEDSRDVSSLDKSALQSELHRLGMKTSGNK 601
Query: 88 DKFYSPNKKRAVLKKRSPVKKNLARDSFGCLENDNSIDHVFKAASDGMDDKNTCKLNFHE 147
+ K+A+LK R K +A D + +S V ++DK+TC
Sbjct: 602 PSLN--DLKQAILKSRQ--KTTIAPD-LPSSSSSSSTTQVKPVDYIDLEDKSTCSCQLIV 656
Query: 148 ITSKLKADELKQICKELNIK--VQSKQSAIKLLE 179
K + DE+K I + NI+ Q Q+ ++L E
Sbjct: 657 ANLKSQTDEIKAIIEPRNIENSTQQTQTLVELRE 690
>SB_17409| Best HMM Match : FlgM (HMM E-Value=1.2e-23)
Length = 180
Score = 35.9 bits (79), Expect = 0.11
Identities = 32/112 (28%), Positives = 53/112 (47%), Gaps = 7/112 (6%)
Query: 142 KLNFHEITSKLKADELKQICKELNIKVQSKQSAIKLLENYSNQSSISKFFIQAKENPTNN 201
KL +K + +LKQ ++ + +V S++ A KLL N+ +Q ++ E P +
Sbjct: 72 KLRDQPTVNKERVAQLKQAIEDGSYQVDSQRVASKLL-NFESQR-----YVCYPEEPAMH 125
Query: 202 KTRLLEIFKKKLGSCYKLTEKARSXXXXXXXXXXXGMGYSIIREKRLELTLL 253
T LLE+F +G+ +L E + + SI+ EK LTLL
Sbjct: 126 DTSLLELFTNDIGTAEQLLELIDTEFQALSDRDLPRL-QSILTEKLPLLTLL 176
>SB_12316| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 676
Score = 33.5 bits (73), Expect = 0.58
Identities = 17/60 (28%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Query: 394 ILQKYLGRHDEVDDAKDAMRPQAVKISKQKTNLGNKLRIILNEIAN--ENIKLEKDLSAE 451
+++K + R+D +DD R QA I+++K K + ++E+A+ + ++ +KDL E
Sbjct: 326 LIEKRMVRNDPIDDKLSLFRQQASIIARKKDAAAEKFKEAMDELASVEQELQKKKDLLKE 385
>SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2248
Score = 33.1 bits (72), Expect = 0.76
Identities = 35/123 (28%), Positives = 52/123 (42%), Gaps = 8/123 (6%)
Query: 55 KTETLIDSIKSEISPTT-PRKSPKSFGSQGSGSKDKFYSPNKKRAVLKKRSPVKKNLARD 113
KT ++D S+ P K+ S + D S +K+ V + P + N A+D
Sbjct: 1056 KTVEIVDKKPSDFDIVIDPSKTKDSSQILSTTKNDNLQSTVRKQQVKVFKEPERSNQAKD 1115
Query: 114 SFGCLENDNSIDHVFKAASDGMDDKNTCKLNFHEITSKLKADELKQICKELNIKVQSKQS 173
G LE + K A D + K T KL EIT+ + E K+ K V+ Q
Sbjct: 1116 LTG-LEKKQEL----KPAVDKAEQKATSKLQEEEITNAMGKIE-KEEAKR-KAAVEESQK 1168
Query: 174 AIK 176
AI+
Sbjct: 1169 AIE 1171
>SB_37360| Best HMM Match : ETS_PEA3_N (HMM E-Value=0.65)
Length = 861
Score = 32.7 bits (71), Expect = 1.0
Identities = 31/106 (29%), Positives = 42/106 (39%), Gaps = 8/106 (7%)
Query: 22 VKTLKNEYTNSIVNICPKAETSSRF-----P-SPERENCKTETLIDSIK-SEISPTTPRK 74
+ L T VNI ET ++ P SP R + I S ISP +P+K
Sbjct: 478 INCLSKRATRPKVNITLPRETEEKYLHLQPPFSPPRNHGSLSRYISKNSLSPISPISPQK 537
Query: 75 SPKSFGSQGSGSKDKFYSPNKKRAVLKKRSPVKKNLARDSFGCLEN 120
F Q +GS D SP L RSP+ ++ LE+
Sbjct: 538 QRPGF-RQRTGSTDSSGSPRSSPNSLSPRSPISPREQLETIKTLES 582
>SB_25257| Best HMM Match : Pkinase (HMM E-Value=4e-10)
Length = 892
Score = 32.7 bits (71), Expect = 1.0
Identities = 32/133 (24%), Positives = 60/133 (45%), Gaps = 15/133 (11%)
Query: 88 DKFYSPNKKRAVLKKRSPVKKNLARDSFGCLENDNSIDHVFKAASDGMDDKNTCKLNFHE 147
++ Y NKKR ++ PV+ + +D + D++ KA D +E
Sbjct: 338 NEVYYANKKRPKPEEPDPVRPKKRPPQYNDGYDDENYDYIVKAGEKWFDR--------YE 389
Query: 148 ITSKLKADELKQICKELNIKVQSKQSAIKLLEN---YSNQSSIS-KFFIQAKENPTNNK- 202
I S + Q+CK + + + + A+K+++N + NQ+ I K +N + K
Sbjct: 390 IESLIGKGSFGQVCKAYDHQ-EKEHIAVKIIKNKKPFLNQAQIEVKLLELMNKNDPDGKY 448
Query: 203 -TRLLEIFKKKLG 214
LL+IF ++ G
Sbjct: 449 YIGLLKIFSREGG 461
>SB_18945| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 779
Score = 32.7 bits (71), Expect = 1.0
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 6/76 (7%)
Query: 523 AHAPGIFLSRYQRY----PLDLYCDSF--YTNRKSEIDERLSSLAAGSAEDMLEAMRRVW 576
A AP I+ +R P+++ D F + +SE+DE+LS + S E E ++ +
Sbjct: 308 APAPEIYQREMERLFEGVPVEIIVDDFLIHAQDQSEMDEKLSMVLNRSREPDPEKIKAII 367
Query: 577 DSRPEGELSGLTRSIE 592
D P + G+ R IE
Sbjct: 368 DMPPPTDKEGVQRLIE 383
>SB_39048| Best HMM Match : RVT_1 (HMM E-Value=1.9e-23)
Length = 1062
Score = 32.3 bits (70), Expect = 1.3
Identities = 40/157 (25%), Positives = 66/157 (42%), Gaps = 11/157 (7%)
Query: 47 PSPERENCKTETLIDSIK-SEISPTTPRKSPKSFGSQGSGSKDKFYSPNKKRAVLKKRSP 105
P+ R+N L D S ++ + + G + SG+K + K+A+LK R
Sbjct: 868 PASRRKNEDLILLEDGRDVSSLNKSALQSELHRLGMKTSGNKPAL-TDRLKQAILKSRQ- 925
Query: 106 VKKNLARDSFGCLENDNSIDHVFKAASDGMDDKNTCKLNFHEITSKLKADELKQICKELN 165
K +A D + +S V ++D +TC K + DE+K I + N
Sbjct: 926 -KTTIAPD-LPSSSSSSSTTQVKPVDYIDLEDNSTCSCQLIVANLKSQIDEIKAIIEPRN 983
Query: 166 IK--VQSKQSAIKLLEN----YSNQSSISKFFIQAKE 196
I+ Q Q+ ++L E ++ SSI AKE
Sbjct: 984 IENSTQQTQTLVELREENNKLRAHLSSIQSEISYAKE 1020
>SB_32489| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1240
Score = 32.3 bits (70), Expect = 1.3
Identities = 49/194 (25%), Positives = 86/194 (44%), Gaps = 17/194 (8%)
Query: 17 ANGPPVKTLKNEYTNSIVNICPKAETSSRFPSPERENCKTETLIDSIKSEISPT-TPRKS 75
AN PPV+T ++ T + P ETS+ S + + T SI PT P +
Sbjct: 831 ANTPPVQTTESYNTPTETTALPYQETSTE-SSTTAQPTQPPTFAPSIAPTQPPTPKPPTT 889
Query: 76 PKSFGSQGSGSKDKFYSPNKKRAVLKKRSPVKKNLARDSFGCLENDNSIDHVFKAASDGM 135
+F + + + + N +LK P N A + G D ++ A+S +
Sbjct: 890 EPNFDIKVDFGQQQSVA-NAGGDLLKPVVPSPSNPALPNLG----DTFMN---TASSTQI 941
Query: 136 DDKNTCKLNFHEITS--KLKADELK----QICKELNIKVQSKQSAIKLLENYSNQSSISK 189
+ + + FH ++ AD+L+ ++ + L+I +SK +A ++ E + Q+SI K
Sbjct: 942 QEVSKVEKPFHAMSKVYPFSADQLEKQESKVPEILDIIDESKSAAKQVGETANGQASIPK 1001
Query: 190 FFIQAKENPTNNKT 203
F + NNKT
Sbjct: 1002 IF-DIIDEMHNNKT 1014
>SB_34096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1430
Score = 31.9 bits (69), Expect = 1.8
Identities = 43/197 (21%), Positives = 78/197 (39%), Gaps = 10/197 (5%)
Query: 88 DKFYSPNKKRAVLKKRSPVKKNLARDSFGCLENDNSIDHVFKAASDGMDDKNTCKLNFHE 147
+K ++ + K KK+ V K D + D++ +KAA DG N + +
Sbjct: 819 EKNFNKDNKNTKAKKKGKVGKIKNADE--SITKDDNTSRNYKAAQDGRSKNNVFTVLMSK 876
Query: 148 ITSKLKADELK-QICKELNIKVQSKQSAIKLLE-NYSNQSSISKFFIQAKENPTNNKTRL 205
TS+ ++ + ++ +L + IK +E + S +K A +
Sbjct: 877 PTSRQESQRSQAEVAHQLQTDENVDKKDIKKVEVSIIESPSTAKCVDSADLEDDTGVSNT 936
Query: 206 LEIFKKKLGSCYKL-TEKARSXXXXXXXXXXXGMGYSIIREKRLELTLLYEKINRETFPI 264
E K + +KL +K+RS + EK+ +L + Y K R F
Sbjct: 937 TEKSSMKGPNAFKLMMQKSRSPTSDKEVTKNVTAKPA---EKKFKLNICYSK-KRTNFE- 991
Query: 265 IENRDIDDASVVFKNRK 281
IE+ DI ++ N+K
Sbjct: 992 IEDDDIFTGEIIGGNKK 1008
>SB_48438| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 353
Score = 31.5 bits (68), Expect = 2.3
Identities = 17/44 (38%), Positives = 21/44 (47%)
Query: 63 IKSEISPTTPRKSPKSFGSQGSGSKDKFYSPNKKRAVLKKRSPV 106
I SP PR+SP + S SK SP+K+R KR V
Sbjct: 112 ISRNASPANPRRSPAPYNSPSRRSKSTSRSPSKERWSKFKRERV 155
>SB_43805| Best HMM Match : YscO (HMM E-Value=6)
Length = 243
Score = 31.5 bits (68), Expect = 2.3
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Query: 142 KLNFHEITSKLKADELKQICKELNIKVQSKQSAIKLLENYSNQSSISKFFIQAKENPTNN 201
K +H++ K KA + ++ KE+ I++ +K AI+ + + ++ K A EN TN
Sbjct: 132 KKTYHQMKKKAKAAKREEELKEMRIEIVNK--AIEESKEFITPDNLDKKIAYALENETNY 189
Query: 202 KTRLLEIFKK 211
L KK
Sbjct: 190 NFALTPEGKK 199
>SB_53556| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1524
Score = 31.1 bits (67), Expect = 3.1
Identities = 54/238 (22%), Positives = 97/238 (40%), Gaps = 21/238 (8%)
Query: 142 KLNFHEITSKLKADELKQICKELNIKVQSKQSAIKLLENYS---NQSSISKFFI--QAKE 196
+L E K + D+LK++ K+ + V+ + IK+LE+ S + I K + Q K+
Sbjct: 606 RLKDAEFVKKKQLDDLKKLQKKYDQMVEDFEKRIKILEDRSEGQRKDLIDKEIVISQLKK 665
Query: 197 NPTNNKTRL------LEIFKKKLGSCYKLTEKARSXXXXXXXXXXXGMGYSIIREKRLEL 250
+ NK ++ L KK++ L K R + ++ L
Sbjct: 666 DEAKNKIQIKRLEDQLADNKKEMDKGLALVNKLRDEIADLKKRLAAADDNDELMKQNESL 725
Query: 251 TLLYEKINRET-FPIIENRDIDDASV--VFKNRKEFEKYLDAHYIYEKYIIETDDKVKCI 307
K+ E F E R+ D +S+ K E ++ EK + + ++++K
Sbjct: 726 RKKVSKLEDEVRFLNDELREADSSSIKDTEKLNAEIREFKKKIVELEKLVDDQEEEIK-K 784
Query: 308 LVETVYEMYKKIDKEDMIRYTSLPEWLRRYTPPYIFVKILGEGIQSLKRNKSDVSSNF 365
L + + + K DK+D EW RY I + L SLKR+K + ++
Sbjct: 785 LEDELKNVPK--DKKD----GGDGEWKSRYDILLIKFEGLERERDSLKRDKDKLHKDY 836
>SB_31407| Best HMM Match : TolA (HMM E-Value=2.5)
Length = 315
Score = 31.1 bits (67), Expect = 3.1
Identities = 17/59 (28%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 142 KLNFHEITSKLKADELKQICKELNIKVQSKQSAIKLLENYSNQSSISKFFIQAKENPTN 200
K +H++ K KA + ++ KE+ I++ +K AI+ + + ++ K A EN TN
Sbjct: 132 KKTYHQMKKKAKAAKREEELKEMRIEIVNK--AIEESKEFITPDNLDKKIAYALENETN 188
>SB_3887| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 141
Score = 31.1 bits (67), Expect = 3.1
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Query: 65 SEISPTTPRKSPKSFGSQGSGSKDKFY--SPNKKRAVLKKRSPVKKNLARDSF 115
S ++P TP P G + S++ + +P KK A R PVK+ L SF
Sbjct: 89 SNVTPNTPNLKPLQIGEVPAKSQELLFDAAPTKK-AARNPRLPVKRKLTLSSF 140
>SB_21261| Best HMM Match : APSES (HMM E-Value=2.3)
Length = 342
Score = 31.1 bits (67), Expect = 3.1
Identities = 26/104 (25%), Positives = 47/104 (45%), Gaps = 2/104 (1%)
Query: 67 ISPTTPRKSPKSFGSQGSGSKDKFYSPNKKRAVLKKRSPVKKNLAR-DSFGCLENDNSID 125
+S RK + + Q K+++ L++ +K+ R DS ND + D
Sbjct: 236 LSVKQSRKRYELYLEQERAKTKSAVEQEKRKSTLEEIEEIKRKKRRLDSDNKTLNDTA-D 294
Query: 126 HVFKAASDGMDDKNTCKLNFHEITSKLKADELKQICKELNIKVQ 169
+ + A DG + ++ + N T+K K EL Q+ LN K++
Sbjct: 295 QLLQKAEDGGNLRHLTQANSFRRTAKDKMGELVQVDISLNEKLK 338
>SB_10624| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2193
Score = 31.1 bits (67), Expect = 3.1
Identities = 20/93 (21%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
Query: 119 ENDNSIDHVFKAASDGMDDKNTCKLNFHEITSKLKADELKQICKELNIKVQSKQSAIKLL 178
EN+ I H+ + A+ +DKN + E+T++ K +L ++ E +++ ++ L
Sbjct: 1944 ENEKEISHLEEDANKLGEDKNELENKIIELTNQYKL-KLAELENENDLRNSRVKNLENLC 2002
Query: 179 ENYSNQSSISKFFIQAKENPTNNKTRLLEIFKK 211
+ Y Q + +P+++ T +L++ K+
Sbjct: 2003 KKYEKQIQELREHNAVAFDPSSSTTLILDVDKR 2035
>SB_29861| Best HMM Match : RRM_1 (HMM E-Value=1.10002e-42)
Length = 1531
Score = 30.7 bits (66), Expect = 4.1
Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Query: 28 EYTNSIVNICPKAETSSRFPSPERENCKTETLIDSIKSEISPTTPRKSPKSFGSQGSGSK 87
+Y + PKAE R PS E ++ E K E P + P GS+GS ++
Sbjct: 588 DYPEKPEHSIPKAENRERMPSVENKSELAEERKGKKKKEKKSKRPLQ-PGEGGSRGSDTE 646
Query: 88 DKFYSPNKKRAVLKKR 103
++ + +K+ ++R
Sbjct: 647 EEVVAKRRKKVKEEER 662
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 30.7 bits (66), Expect = 4.1
Identities = 14/37 (37%), Positives = 21/37 (56%)
Query: 553 IDERLSSLAAGSAEDMLEAMRRVWDSRPEGELSGLTR 589
I+ L +LA G +++ +EA D RP GE+ G R
Sbjct: 1877 IESLLGALAQGDSDEEIEAFDEPGDYRPSGEMKGEQR 1913
>SB_41259| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 961
Score = 30.3 bits (65), Expect = 5.4
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Query: 403 DEVDDAKDAM--RPQAVKISKQKTNLGNKLRIILNEIANENIKLEKDLSAEHLHKNPM 458
D V ++A+ R QAV KQKT N+L+ ++N + E K ++ H H P+
Sbjct: 284 DSVQMVENAVLERDQAVIREKQKTQEANRLQEVVNRLLREAGKRTRE-EKTHFHPRPV 340
>SB_7843| Best HMM Match : DUF740 (HMM E-Value=0.5)
Length = 1362
Score = 30.3 bits (65), Expect = 5.4
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 7/77 (9%)
Query: 8 SKKRFSLSLANGPPVKTLKNEYTNSIVNICPKAETSSRFPSPERENCKTETLIDSIKSEI 67
S +RF +SL N PP+ L +E + P+ E P ++E +D IKS
Sbjct: 1041 SLQRFDISLENRPPIPALDSELNIMLSPNSPRIEN-----HPSEPGLRSE--LDIIKSPD 1093
Query: 68 SPTTPRKSPKSFGSQGS 84
P++ ++ +S +Q S
Sbjct: 1094 LPSSNTRNVRSDENQNS 1110
>SB_1298| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1668
Score = 30.3 bits (65), Expect = 5.4
Identities = 13/48 (27%), Positives = 28/48 (58%)
Query: 141 CKLNFHEITSKLKADELKQICKELNIKVQSKQSAIKLLENYSNQSSIS 188
C+L I +K + + L+ ++++++VQ+K+ + LEN + S S
Sbjct: 156 CQLKREIIQAKTRVERLRSEMEKVSVEVQAKKEGFRQLENVDKRFSSS 203
>SB_43064| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 975
Score = 29.9 bits (64), Expect = 7.1
Identities = 15/31 (48%), Positives = 19/31 (61%)
Query: 83 GSGSKDKFYSPNKKRAVLKKRSPVKKNLARD 113
G+ + D+ K +AVLKK S VKK L RD
Sbjct: 117 GNSTPDRSTERQKSKAVLKKLSSVKKILRRD 147
>SB_18984| Best HMM Match : DNA_topoisoIV (HMM E-Value=0)
Length = 1182
Score = 29.9 bits (64), Expect = 7.1
Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 6/69 (8%)
Query: 64 KSEISP---TTPRKSPKSFGSQGSGSKDKFYSPNKKRAVLKKRSPVKKNLARDSFGCLEN 120
K ++SP ++P+K K+ S+ + S + P KK+A +KR P K A G ++
Sbjct: 1108 KQKVSPKKKSSPKKKGKAPSSKSADSDEA--QPGKKKAAPRKR-PAKGVTAASRDGDSDS 1164
Query: 121 DNSIDHVFK 129
D S++ V K
Sbjct: 1165 DASVEVVSK 1173
>SB_40414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 368
Score = 29.9 bits (64), Expect = 7.1
Identities = 15/52 (28%), Positives = 22/52 (42%)
Query: 37 CPKAETSSRFPSPERENCKTETLIDSIKSEISPTTPRKSPKSFGSQGSGSKD 88
C S F S RE+ T L S+K + P P P + G + + + D
Sbjct: 220 CTLDTRGSNFTSNSRESATTTELRGSLKGSLEPLVPAVGPPNNGGKSTFATD 271
>SB_27684| Best HMM Match : DUF1660 (HMM E-Value=3.8)
Length = 398
Score = 29.9 bits (64), Expect = 7.1
Identities = 15/64 (23%), Positives = 30/64 (46%)
Query: 15 SLANGPPVKTLKNEYTNSIVNICPKAETSSRFPSPERENCKTETLIDSIKSEISPTTPRK 74
SL +G + ++N+ + + + PK + R P+P + S+ SP P +
Sbjct: 256 SLGSGSDDEVMRNDGRDHVKDTSPKQQEKVRIPAPTMTQGWSSPTPQSLGPARSPRPPPQ 315
Query: 75 SPKS 78
SP++
Sbjct: 316 SPRA 319
>SB_26685| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 176
Score = 29.9 bits (64), Expect = 7.1
Identities = 15/52 (28%), Positives = 22/52 (42%)
Query: 37 CPKAETSSRFPSPERENCKTETLIDSIKSEISPTTPRKSPKSFGSQGSGSKD 88
C S F S RE+ T L S+K + P P P + G + + + D
Sbjct: 28 CTLDTRGSNFTSNSRESATTTELRGSLKGSLEPLVPAVGPPNNGGKSTFATD 79
>SB_47268| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 722
Score = 29.5 bits (63), Expect = 9.4
Identities = 29/138 (21%), Positives = 58/138 (42%), Gaps = 11/138 (7%)
Query: 7 GSKKRFSLSLANGPPVKTLKNEYTNSIVNICPKAETSSRFPSPERENCKTETLIDSI--- 63
G +K+ ++SL G T + ++N + S + +E C + S+
Sbjct: 420 GKEKKKNISLGQGGESAT---NSSGDLLNGEKEKVASKKAKKKAKEQCPNDVTEVSVSPA 476
Query: 64 -KSEISPTTPRKSPKSFGSQGSGSKDKFYSPNKKRAVLKKRSPVKKNLARDSFGCLENDN 122
KS+ P T KS + +K Y K V++K+ K + A+ + + ++
Sbjct: 477 EKSDTEPITKPKSTSKMTKDQTKDAEKQYDAKAKNDVVEKKP--KAHKAKKTLD--KKES 532
Query: 123 SIDHVFKAASDGMDDKNT 140
+ V + G+++KNT
Sbjct: 533 KKETVHWSPKTGVEEKNT 550
>SB_28495| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6753
Score = 29.5 bits (63), Expect = 9.4
Identities = 17/50 (34%), Positives = 26/50 (52%)
Query: 329 SLPEWLRRYTPPYIFVKILGEGIQSLKRNKSDVSSNFAVEILSVLIAQDS 378
SL + + + P F + LGEG+ K ++ DVS ++L VLI S
Sbjct: 5094 SLTKAISNVSYPNGFARHLGEGLNRSKTHQFDVSGRSTKQVLIVLIGGKS 5143
>SB_22450| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2806
Score = 29.5 bits (63), Expect = 9.4
Identities = 39/163 (23%), Positives = 73/163 (44%), Gaps = 23/163 (14%)
Query: 45 RFPSPERENCKTETLIDSIKSEISPTTPRKS----PKSFGSQGSGSKDKFYSPNKKRAVL 100
R SPE+ + + D+IK PTTP K+ P+ +G+ +G F + + + +++
Sbjct: 2230 RSNSPEKSDTSPDPS-DAIKI---PTTPHKTVSPCPQIYGALYNG----FETSDSEGSII 2281
Query: 101 KKRSPVKKNLARDSFGCLENDNSIDHVFKAASDGMDDKNTCKLNFHEITSKLKADELKQI 160
P KKN +++ + + + S K+ + G K K+ HE+T L +D
Sbjct: 2282 ----PSKKNGSKEGWSSRQQETSPK---KSPNSG---KGKEKI-LHELTQYLNSDRKVVK 2330
Query: 161 CKELNIKVQSKQSAIKLLENYSNQSSISKFFIQAKENPTNNKT 203
K N+K ++ L ++ +++S F N T T
Sbjct: 2331 NKSRNVKSPQNSEDLENLSSHPDENSAPLLFHVVTPNTTPRVT 2373
>SB_7965| Best HMM Match : Galactosyl_T (HMM E-Value=0.2)
Length = 345
Score = 29.5 bits (63), Expect = 9.4
Identities = 17/73 (23%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Query: 246 KRLELTLLYEKINRETFPIIENRDIDDASVVFKNRKEFEKYLDAHYIYEKYIIETDDKVK 305
KR ++ L E FP + ++ S K R ++ +D H + I+TDD+
Sbjct: 118 KRCDVLLFMSTKTDENFPAVGLNVLEGQSAWHKTRAAWQYVIDNHINDADWFIKTDDET- 176
Query: 306 CILVETVYEMYKK 318
+++E + + K
Sbjct: 177 YVVIENLKHLCSK 189
>SB_40852| Best HMM Match : SURF6 (HMM E-Value=3.8)
Length = 296
Score = 29.5 bits (63), Expect = 9.4
Identities = 42/173 (24%), Positives = 68/173 (39%), Gaps = 25/173 (14%)
Query: 3 QNSAGSKKRFSLS---LANGPPVKTLKN--EYTNSIVNICPKAETSSRFPS-PERENCKT 56
++S G+ R ++S L PP+K L ++ + I + K + FP P E KT
Sbjct: 114 RHSVGNNPRKAMSYRELKRLPPIKQLSEAIQWPSGIKSGTEKVQ----FPQFPSAEVLKT 169
Query: 57 ETLI---DSIKSEISPTTPRKSPK--------SFGSQGSGSKDKFYSPNKKRAVLKKRSP 105
++ D IK+ + + PK + G + K P +++ KK
Sbjct: 170 RRVLAKEDEIKASANTNVFHEKPKLSDITKINNDRQHQQGRRQKQQQPQQQQRTKKKLKT 229
Query: 106 VKKNLARD---SFGCLENDNSIDHVFKAASDGMDDKNTCKLNF-HEITSKLKA 154
+++ D S CL ND S D +G K T L H +KA
Sbjct: 230 IQRRKTCDFLNSASCLANDESTDLAASFKMNGNSKKETQFLQLPHSSQQTIKA 282
>SB_37874| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 426
Score = 29.5 bits (63), Expect = 9.4
Identities = 27/101 (26%), Positives = 41/101 (40%), Gaps = 4/101 (3%)
Query: 8 SKKRFSLSLANGPPVKTLKNEYTNSIVNICPKAETSSRFPSPERENCKTETLIDSIKSEI 67
+K+R SL A P T K E + I ++ A T + N + + + EI
Sbjct: 286 NKRRDSLHAAF-PHSVTFKQEGASKIPDL---AVTPVHDKDLQDRNIVAKCEVKGTQGEI 341
Query: 68 SPTTPRKSPKSFGSQGSGSKDKFYSPNKKRAVLKKRSPVKK 108
SPT P +G K + + NK+ L K +P K
Sbjct: 342 SPTEPEALLNPYGQTNVSEKLELLNFNKESLNLNKEAPNNK 382
>SB_34550| Best HMM Match : VWA (HMM E-Value=0)
Length = 519
Score = 29.5 bits (63), Expect = 9.4
Identities = 17/50 (34%), Positives = 26/50 (52%)
Query: 329 SLPEWLRRYTPPYIFVKILGEGIQSLKRNKSDVSSNFAVEILSVLIAQDS 378
SL + + + P F + LGEG+ K ++ DVS ++L VLI S
Sbjct: 199 SLTKAISNVSYPNGFARHLGEGLNRSKTHQFDVSGRSTKQVLIVLIGGKS 248
>SB_29805| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 400
Score = 29.5 bits (63), Expect = 9.4
Identities = 22/77 (28%), Positives = 31/77 (40%), Gaps = 3/77 (3%)
Query: 15 SLANGPPVKTLKNEYTNSIVNICPKAETSSRFPSPERENCKTETLIDSIKSEISPTTPRK 74
S+ P KT + + NS+ N +T S F + KTE SP+
Sbjct: 273 SIGKTEPTKTAETDNKNSLPNKINSDDTRSSFKPYQHSTDKTEETPPEKTGFRSPSLKEN 332
Query: 75 SPKSFGSQGSGSKDKFY 91
P+ S + SKDK Y
Sbjct: 333 PPR---SPVTDSKDKAY 346
>SB_5677| Best HMM Match : fn3 (HMM E-Value=0.0092)
Length = 1146
Score = 29.5 bits (63), Expect = 9.4
Identities = 21/95 (22%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Query: 355 KRNKSDVSSNFAVEILSVLIAQDSF--RQHKKAGWYTEKALILQKYLGRHDEVDDA-KDA 411
K+ K + FAV + I+++ ++ K G + + ++L H + +D
Sbjct: 167 KKAKPEGEVKFAVPVTDSPISEEKLQDKESKDLGEVKAEDVKKDEWLSHHQGIYQLLRDV 226
Query: 412 MRPQAVKISKQKTNLGNKLRIILNEIANENIKLEK 446
+ +AV+ K+ KLR+ + E+ EN L++
Sbjct: 227 INKRAVEFEKEVLLETEKLRVKVQELEEENRTLQE 261
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.317 0.134 0.395
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,275,299
Number of Sequences: 59808
Number of extensions: 1000718
Number of successful extensions: 2748
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 2726
Number of HSP's gapped (non-prelim): 48
length of query: 687
length of database: 16,821,457
effective HSP length: 87
effective length of query: 600
effective length of database: 11,618,161
effective search space: 6970896600
effective search space used: 6970896600
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 63 (29.5 bits)
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