GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001875-TA|BGIBMGA001875-PA|undefined
         (687 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeot...    29   0.31 
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    27   1.2  
X95912-1|CAA65156.1|  696|Anopheles gambiae immune factor protein.     26   2.9  
AJ420785-4|CAD12784.1|  395|Anopheles gambiae serpin protein.          26   2.9  
AJ420785-3|CAD12783.1|  380|Anopheles gambiae serpin protein.          26   2.9  
AJ420785-2|CAD12782.1|  382|Anopheles gambiae serpin protein.          26   2.9  
AJ420785-1|CAD12781.1|  379|Anopheles gambiae serpin protein.          26   2.9  
AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein pr...    26   2.9  
AJ271353-1|CAB69785.1|  380|Anopheles gambiae putative serine pr...    25   5.0  
AJ271352-1|CAB69784.1|  379|Anopheles gambiae putative serine pr...    25   5.0  
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    25   8.8  

>AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeotic
           protein protein.
          Length = 308

 Score = 29.5 bits (63), Expect = 0.31
 Identities = 11/28 (39%), Positives = 19/28 (67%)

Query: 603 LGPRRVGALCERLATNYGHAHSGFPDLT 630
           +G   +G+ C +L+++ G A SG PD+T
Sbjct: 69  VGVDSLGSACSQLSSSVGGAQSGLPDIT 96


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 27.5 bits (58), Expect = 1.2
 Identities = 21/81 (25%), Positives = 36/81 (44%), Gaps = 4/81 (4%)

Query: 144 NFHEITSKLKADELKQICKELNIKVQSKQSAIKLLENYSNQSSISKFFIQAKENPTNNKT 203
           N H  T      EL++I    NI+V +    +    N     S+ K   ++K+    +K 
Sbjct: 196 NEHGQTVSTSRAELQKILLAFNIQVDNPICVL----NQDLARSLLKDSDESKQYTFFSKA 251

Query: 204 RLLEIFKKKLGSCYKLTEKAR 224
             ++  K+KL  C  + +KAR
Sbjct: 252 TQIDTIKQKLNECAVIAKKAR 272


>X95912-1|CAA65156.1|  696|Anopheles gambiae immune factor protein.
          Length = 696

 Score = 26.2 bits (55), Expect = 2.9
 Identities = 19/92 (20%), Positives = 41/92 (44%), Gaps = 3/92 (3%)

Query: 13  SLSLANGPPVKTLKNEYTNSIVNICPKAETSSRFPSPERENCK---TETLIDSIKSEISP 69
           +L LA G P+  +    TN+  N+ P +  S  + + +  N       + + S+   +S 
Sbjct: 553 TLPLATGDPLMAMSTANTNNQPNVGPPSLGSDFYMNLDLANLDPVFNSSELRSVLGSLST 612

Query: 70  TTPRKSPKSFGSQGSGSKDKFYSPNKKRAVLK 101
           T   +  ++   Q SG   + +S + ++  +K
Sbjct: 613 TDLNRLEQTANMQTSGGNYQQHSASNQQQAIK 644


>AJ420785-4|CAD12784.1|  395|Anopheles gambiae serpin protein.
          Length = 395

 Score = 26.2 bits (55), Expect = 2.9
 Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 2/63 (3%)

Query: 357 NKSDVSSNFAVEILSVLIAQDSFRQHKKAGWYTEKALILQKYLGRHDEV--DDAKDAMRP 414
           NK  V  N+AV+     IA  SFR   ++  + E A   +K  G  +E   +  KD + P
Sbjct: 98  NKIYVMQNYAVKGAFNAIATGSFRSEAESVNFAESAAAAKKINGWVEEKTNNKIKDLISP 157

Query: 415 QAV 417
            A+
Sbjct: 158 DAL 160


>AJ420785-3|CAD12783.1|  380|Anopheles gambiae serpin protein.
          Length = 380

 Score = 26.2 bits (55), Expect = 2.9
 Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 2/63 (3%)

Query: 357 NKSDVSSNFAVEILSVLIAQDSFRQHKKAGWYTEKALILQKYLGRHDEV--DDAKDAMRP 414
           NK  V  N+AV+     IA  SFR   ++  + E A   +K  G  +E   +  KD + P
Sbjct: 98  NKIYVMQNYAVKGAFNAIATGSFRSEAESVNFAESAAAAKKINGWVEEKTNNKIKDLISP 157

Query: 415 QAV 417
            A+
Sbjct: 158 DAL 160


>AJ420785-2|CAD12782.1|  382|Anopheles gambiae serpin protein.
          Length = 382

 Score = 26.2 bits (55), Expect = 2.9
 Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 2/63 (3%)

Query: 357 NKSDVSSNFAVEILSVLIAQDSFRQHKKAGWYTEKALILQKYLGRHDEV--DDAKDAMRP 414
           NK  V  N+AV+     IA  SFR   ++  + E A   +K  G  +E   +  KD + P
Sbjct: 98  NKIYVMQNYAVKGAFNAIATGSFRSEAESVNFAESAAAAKKINGWVEEKTNNKIKDLISP 157

Query: 415 QAV 417
            A+
Sbjct: 158 DAL 160


>AJ420785-1|CAD12781.1|  379|Anopheles gambiae serpin protein.
          Length = 379

 Score = 26.2 bits (55), Expect = 2.9
 Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 2/63 (3%)

Query: 357 NKSDVSSNFAVEILSVLIAQDSFRQHKKAGWYTEKALILQKYLGRHDEV--DDAKDAMRP 414
           NK  V  N+AV+     IA  SFR   ++  + E A   +K  G  +E   +  KD + P
Sbjct: 98  NKIYVMQNYAVKGAFNAIATGSFRSEAESVNFAESAAAAKKINGWVEEKTNNKIKDLISP 157

Query: 415 QAV 417
            A+
Sbjct: 158 DAL 160


>AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein
           protein.
          Length = 942

 Score = 26.2 bits (55), Expect = 2.9
 Identities = 28/131 (21%), Positives = 53/131 (40%), Gaps = 8/131 (6%)

Query: 336 RYTPPYIFVKILGEGIQSLKRNKSDVSSNFAVEILSVLIAQDSFRQHKKAG-WYTEKALI 394
           RYT  Y F+K   E  + ++   + V + F    + +   Q    + K+ G +Y  K ++
Sbjct: 105 RYTTVY-FLKRKSEAAEVIEEYVTMVHNRFGRNPIVIRSDQGGEYKSKRLGQFYRAKGIV 163

Query: 395 LQ---KYLGRHDEVDDAKDAMRPQAVKISKQKTNLGNKLRIILNEIANENIKLEKDLSAE 451
            Q    Y  + + V + K+    +  +       LG +      E  N  + L+   S+ 
Sbjct: 164 PQFTAGYSPQQNGVAERKNRTLVEMARCMLIDAKLGYRFWA---EAINAAVYLQNISSSR 220

Query: 452 HLHKNPMDNWY 462
            + K P + WY
Sbjct: 221 SIEKTPFELWY 231


>AJ271353-1|CAB69785.1|  380|Anopheles gambiae putative serine
           protease inhibitor protein.
          Length = 380

 Score = 25.4 bits (53), Expect = 5.0
 Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 2/63 (3%)

Query: 357 NKSDVSSNFAVEILSVLIAQDSFRQHKKAGWYTEKALILQKYLGRHDEVDDAK--DAMRP 414
           NK  V  N+AV+     IA  SFR   ++  + E A   +K  G  +E  + K  D + P
Sbjct: 98  NKIYVMQNYAVKGAFNAIATGSFRSEAESVNFAESAAAAKKINGWVEENTNNKIRDLISP 157

Query: 415 QAV 417
            A+
Sbjct: 158 DAL 160


>AJ271352-1|CAB69784.1|  379|Anopheles gambiae putative serine
           protease inhibitor protein.
          Length = 379

 Score = 25.4 bits (53), Expect = 5.0
 Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 2/63 (3%)

Query: 357 NKSDVSSNFAVEILSVLIAQDSFRQHKKAGWYTEKALILQKYLGRHDEVDDAK--DAMRP 414
           NK  V  N+AV+     IA  SFR   ++  + E A   +K  G  +E  + K  D + P
Sbjct: 98  NKIYVMQNYAVKGAFNAIATGSFRSEAESVNFAESAAAAKKINGWVEENTNNKIRDLISP 157

Query: 415 QAV 417
            A+
Sbjct: 158 DAL 160


>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 24.6 bits (51), Expect = 8.8
 Identities = 23/100 (23%), Positives = 43/100 (43%), Gaps = 1/100 (1%)

Query: 126 HVFKAASDGMDDKNTCKLNFHEITSKLKADELKQICKELNIKVQSKQSAIKLLENYSNQS 185
           H F    +  D  N    N  +  ++    + K+  +ELN K+++ Q  I        Q 
Sbjct: 708 HRFGQLKEQHDMLNYELNNLKQRLAQTSFQQTKEEIEELNKKIETLQKTIVEARETQTQC 767

Query: 186 SISKFFIQAK-ENPTNNKTRLLEIFKKKLGSCYKLTEKAR 224
           S     +QAK  +   ++ R L+  ++ L    K +E++R
Sbjct: 768 SAKVKDLQAKIADGKGHRERELKSAEEDLKRSKKKSEESR 807


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.317    0.134    0.395 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 697,958
Number of Sequences: 2123
Number of extensions: 28956
Number of successful extensions: 48
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 47
Number of HSP's gapped (non-prelim): 11
length of query: 687
length of database: 516,269
effective HSP length: 69
effective length of query: 618
effective length of database: 369,782
effective search space: 228525276
effective search space used: 228525276
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 51 (24.6 bits)