BLASTP 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BGIBMGA001874-TA|BGIBMGA001874-PA|IPR002364|Quinone oxidoreductase/zeta-crystallin, IPR002085|Alcohol dehydrogenase superfamily, zinc-containing, IPR000079|High mobility group protein HMG14 and HMG17, IPR011032|GroES-like, IPR013154|Alcohol dehydrogenase GroES-like, IPR013149|Alcohol dehydrogenase, zinc-binding (383 letters) Database: celegans 27,539 sequences; 12,573,161 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z92834-3|CAB07384.1| 328|Caenorhabditis elegans Hypothetical pr... 79 4e-15 Z81523-6|CAB04244.1| 2586|Caenorhabditis elegans Hypothetical pr... 50 3e-06 Z82081-5|CAB04958.1| 344|Caenorhabditis elegans Hypothetical pr... 49 5e-06 Z70782-5|CAA94842.1| 347|Caenorhabditis elegans Hypothetical pr... 38 0.009 AF067618-4|AAY44003.1| 381|Caenorhabditis elegans Hypothetical ... 38 0.016 U18781-1|AAB03374.1| 384|Caenorhabditis elegans alcohol dehydro... 37 0.021 AC006663-4|AAF39899.1| 384|Caenorhabditis elegans Hypothetical ... 37 0.021 AC006663-3|AAL32231.1| 386|Caenorhabditis elegans Hypothetical ... 37 0.021 Z81570-2|CAB04604.1| 349|Caenorhabditis elegans Hypothetical pr... 36 0.036 AC025722-1|AAK68507.1| 554|Caenorhabditis elegans Hypothetical ... 36 0.063 Z70782-4|CAA94841.1| 347|Caenorhabditis elegans Hypothetical pr... 35 0.11 AL023844-8|CAA19533.1| 346|Caenorhabditis elegans Hypothetical ... 33 0.45 AF125951-1|AAD14690.3| 326|Caenorhabditis elegans Hypothetical ... 33 0.45 AC024200-12|AAF36010.2| 1232|Caenorhabditis elegans Hypothetical... 29 4.2 Z48582-7|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 29 5.5 Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 29 5.5 Z81570-3|CAB04603.1| 351|Caenorhabditis elegans Hypothetical pr... 29 7.3 Z49911-3|CAA90126.2| 735|Caenorhabditis elegans Hypothetical pr... 29 7.3 U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five) in... 29 7.3 U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five) in... 29 7.3 U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five) in... 29 7.3 U97011-2|AAB52325.2| 689|Caenorhabditis elegans Hypothetical pr... 28 9.6 U41034-8|AAA82382.1| 669|Caenorhabditis elegans Hypothetical pr... 28 9.6 >Z92834-3|CAB07384.1| 328|Caenorhabditis elegans Hypothetical protein F39B2.3 protein. Length = 328 Score = 79.4 bits (187), Expect = 4e-15 Identities = 58/204 (28%), Positives = 88/204 (43%), Gaps = 7/204 (3%) Query: 12 GLNFQDLIVRQGAIDSPPKTPFILGFECAGEIEQVGENVTNFKVGDQVVALPEYRAWAEL 71 G+N D +R G P P++ G + AG +E VGE+V N KVGD+V E + AE Sbjct: 47 GVNPVDTYIRAGQYGKLPNLPYVPGKDGAGFVELVGESVKNVKVGDRVWYGSEADSTAEY 106 Query: 72 VSVPAQYVYALPEGMSALDAVAITTNYVVAYLLLFEMANLTPGKSLLVH--SXXXXXXXX 129 V+V + LPEG+S + ++ Y+ AY LF +A G +LVH S Sbjct: 107 VAV--NRPFELPEGVSFEEGASLGVPYLTAYRALFHLAGAKTGDVILVHGASGGVGSALM 164 Query: 130 XXXXXKTVENVTVFGVCSKSKHEALKTNNNNIDHLLERGSDYTSEVRKVTPDGVDIVLDC 189 + +E V G + N +H Y S+++ P G + + + Sbjct: 165 QLAAWRNIEAVGTAGSADGIRFVKSLGARNVYNH---SDKQYVSKMKNDYPGGFNHIFEM 221 Query: 190 LCGEECNRGYSLLKPMGRYILYGS 213 N LL P GR + G+ Sbjct: 222 AAHTNLNTDLGLLAPRGRVAVIGN 245 >Z81523-6|CAB04244.1| 2586|Caenorhabditis elegans Hypothetical protein F32H2.5 protein. Length = 2586 Score = 50.0 bits (114), Expect = 3e-06 Identities = 69/316 (21%), Positives = 119/316 (37%), Gaps = 26/316 (8%) Query: 5 CGGYGHRGLNFQDLIVRQGAIDSPPKTPFILGFECAGEIEQVGENVTNFKVGDQVVALPE 64 C Y + +NF+D+++ G + EC +E G K G +++ + Sbjct: 1627 CSVY-YAPINFRDIMLAYGRLPPDAIPGNFADRECLLGMEFSGR----LKDGTRLMGILP 1681 Query: 65 YRAWAELVSVPAQYVYALPEGMSALDAVAITTNYVVAYLLLFEMANLTPGKSLLVHSXXX 124 +A A V V Y + +P + +A + Y AY L + G +L+H Sbjct: 1682 AQALATTVMVDRDYAWEVPRDWTLAEASTVPVVYTTAYYALVRRGLMKKGDKILIHGGAG 1741 Query: 125 XXXXXXXXXXKTVENVTVFGVCSKSKHEALKTNNNNI-DHLL--ERGSDYTSEVRKVTPD 181 V S K E LK + +H R +D+ +R+ T Sbjct: 1742 GVGQAAIAIALAAGCEVFTTVGSAEKREFLKNLFPQLQEHHFANSRSADFELHIRQHTKG 1801 Query: 182 -GVDIVLDCLCGEECNRGYSLLKPMGRYILYGSSNIVTGETKSFFSAARAWWQVDKVSPI 240 GV+IVL+ L E L GR++ G ++ Q + Sbjct: 1802 RGVNIVLNSLANEMLQASLRCLARHGRFLEIGKVDLS---------------QNSSLGMA 1846 Query: 241 KLFDENKSLAGLNLRHLLFQH-GRGDTVRRAVHSVFTLWAQGKVKPIVDSTWALEDVGEA 299 KL D N S+ G+ L ++ G D + + G VKP+ ++ + EA Sbjct: 1847 KLLD-NVSVHGILLDSIMDPTVGDLDEWKEIARLLEQGIKSGVVKPLHSHSFPADKAEEA 1905 Query: 300 MQKMHDRKNIGKLVLD 315 + M K+IGK++++ Sbjct: 1906 FRFMSAGKHIGKVIME 1921 >Z82081-5|CAB04958.1| 344|Caenorhabditis elegans Hypothetical protein W09H1.5 protein. Length = 344 Score = 49.2 bits (112), Expect = 5e-06 Identities = 51/203 (25%), Positives = 81/203 (39%), Gaps = 6/203 (2%) Query: 13 LNFQDLIVRQGAIDSPPKTPFILGFECAGEIEQVGENVTNFKVGDQVVA-LPEYRAWAEL 71 +N DL QG P P + G E G++ VG NV++ KVGD V+ W EL Sbjct: 57 INPADLNQIQGVYPVKPALPAVGGNEGFGKVISVGSNVSSIKVGDHVIPDRSGLGTWREL 116 Query: 72 VSVPAQYVYALPEGMSALDAVAITTNYVVAYLLLFEMANLTPGKSLLVHSXXXXXXXXXX 131 ++ + +S A N AY +L + +L G ++ + Sbjct: 117 GLHQENDLFPIDNTLSMEYAATFQVNPPTAYRMLKDFIDLKKGDTVAQNGANSAVGKHVI 176 Query: 132 XXXKTVENVTVFGVCSKSKHEAL--KTNNNNIDHLLERGSDYTSEVRKVTPDGVDIVLDC 189 + + TV V S+ E L + + D ++ + Y+ RK GV + L+C Sbjct: 177 QICRILGIKTVNVVRSRDNLEELVKELKDLGADEVITQEELYS---RKKKFPGVKLALNC 233 Query: 190 LCGEECNRGYSLLKPMGRYILYG 212 + G SLL G + YG Sbjct: 234 VGGRSSLFLASLLDHGGCMVTYG 256 >Z70782-5|CAA94842.1| 347|Caenorhabditis elegans Hypothetical protein R04B5.6 protein. Length = 347 Score = 38.3 bits (85), Expect = 0.009 Identities = 18/42 (42%), Positives = 25/42 (59%), Gaps = 1/42 (2%) Query: 23 GAIDS-PPKTPFILGFECAGEIEQVGENVTNFKVGDQVVALP 63 GAI S K P +LG E +G + ++G V FKVGD++ P Sbjct: 51 GAIGSFVVKEPMVLGHESSGVVSEIGSEVKGFKVGDRIAMEP 92 >AF067618-4|AAY44003.1| 381|Caenorhabditis elegans Hypothetical protein F56H1.6 protein. Length = 381 Score = 37.5 bits (83), Expect = 0.016 Identities = 45/183 (24%), Positives = 72/183 (39%), Gaps = 18/183 (9%) Query: 7 GYGHRGLNFQDLIVRQGAIDSPPKTPFILGFECAGEIEQVGENVTNFKVGDQVVALPEY- 65 GYG L I A S + P I G +C +E VG +V N GD+V+A+ Sbjct: 64 GYGREFLGTWKKIESCDAAAS--RFPLIPGRDCTAVVESVGGDVHNLAPGDEVMAVVPVI 121 Query: 66 --RAWAELVSVPAQYVYALPEGMSALDAVAITTNYVVAYLLLFEMANLTPGKS----LLV 119 AE V ++Y P +S + A A+ AY F +A ++ + +L+ Sbjct: 122 LPGTHAEFVVTDSKYCSKKPSNLSFVSAAALPYVASTAY-SAFTIARVSQRNAKQQRVLI 180 Query: 120 HSXXXXXXXXXXXXXKTVENVTVFGVCSKSKHEAL-----KTNNNNIDHLLERGS---DY 171 H K + C+K + + L N + D + + G+ DY Sbjct: 181 HGGAGGVGSMAIQLLKAWGCEKIVATCAKGRLDYLYLCNFSNKNCSFDIVKQLGAIPVDY 240 Query: 172 TSE 174 TS+ Sbjct: 241 TSD 243 >U18781-1|AAB03374.1| 384|Caenorhabditis elegans alcohol dehydrogenase protein. Length = 384 Score = 37.1 bits (82), Expect = 0.021 Identities = 17/31 (54%), Positives = 20/31 (64%) Query: 32 PFILGFECAGEIEQVGENVTNFKVGDQVVAL 62 P +LG E +G +E VGE VT F GD VV L Sbjct: 65 PVVLGHEGSGIVESVGEGVTGFAPGDHVVPL 95 >AC006663-4|AAF39899.1| 384|Caenorhabditis elegans Hypothetical protein H24K24.3a protein. Length = 384 Score = 37.1 bits (82), Expect = 0.021 Identities = 17/31 (54%), Positives = 20/31 (64%) Query: 32 PFILGFECAGEIEQVGENVTNFKVGDQVVAL 62 P +LG E +G +E VGE VT F GD VV L Sbjct: 65 PVVLGHEGSGIVESVGEGVTGFAPGDHVVPL 95 >AC006663-3|AAL32231.1| 386|Caenorhabditis elegans Hypothetical protein H24K24.3b protein. Length = 386 Score = 37.1 bits (82), Expect = 0.021 Identities = 17/31 (54%), Positives = 20/31 (64%) Query: 32 PFILGFECAGEIEQVGENVTNFKVGDQVVAL 62 P +LG E +G +E VGE VT F GD VV L Sbjct: 67 PVVLGHEGSGIVESVGEGVTGFAPGDHVVPL 97 >Z81570-2|CAB04604.1| 349|Caenorhabditis elegans Hypothetical protein K12G11.3 protein. Length = 349 Score = 36.3 bits (80), Expect = 0.036 Identities = 17/49 (34%), Positives = 28/49 (57%) Query: 10 HRGLNFQDLIVRQGAIDSPPKTPFILGFECAGEIEQVGENVTNFKVGDQ 58 + G+ DL V G + P + G E AG + Q+G+NVT +++GD+ Sbjct: 42 YSGICHSDLHVWLGDLKDMSVCPLVGGHEGAGSVVQIGKNVTGWQLGDK 90 >AC025722-1|AAK68507.1| 554|Caenorhabditis elegans Hypothetical protein Y50D4C.2 protein. Length = 554 Score = 35.5 bits (78), Expect = 0.063 Identities = 16/31 (51%), Positives = 20/31 (64%) Query: 32 PFILGFECAGEIEQVGENVTNFKVGDQVVAL 62 P +LG E +G +E VG+ VT F GD VV L Sbjct: 238 PVVLGHEGSGIVESVGKGVTGFAPGDHVVPL 268 >Z70782-4|CAA94841.1| 347|Caenorhabditis elegans Hypothetical protein R04B5.5 protein. Length = 347 Score = 34.7 bits (76), Expect = 0.11 Identities = 14/34 (41%), Positives = 21/34 (61%) Query: 30 KTPFILGFECAGEIEQVGENVTNFKVGDQVVALP 63 K P I+G E +G + +VG V + KVGD++ P Sbjct: 59 KEPMIVGHETSGIVSEVGNEVKHLKVGDRIAMEP 92 >AL023844-8|CAA19533.1| 346|Caenorhabditis elegans Hypothetical protein Y48A6B.9 protein. Length = 346 Score = 32.7 bits (71), Expect = 0.45 Identities = 34/146 (23%), Positives = 56/146 (38%), Gaps = 2/146 (1%) Query: 13 LNFQDLIVRQGAIDSPPKTPFILGFECAGEIEQVGENVTNFKVGDQVVALPEYRA-WAEL 71 +N D+ QG + P I G E G + + G + FK GD V W E Sbjct: 47 INPLDINRIQGNYAVRAELPVIGGSEGVGRVVKAGSG-SRFKSGDHVTIFSANTPIWTEF 105 Query: 72 VSVPAQYVYALPEGMSALDAVAITTNYVVAYLLLFEMANLTPGKSLLVHSXXXXXXXXXX 131 V + L + A + N A+++L + NL G ++ +S Sbjct: 106 GVVDDDELVKLDNRIPLDLAATLMINPPTAWIMLKKYVNLQKGDYIIQNSANSGVGRSVI 165 Query: 132 XXXKTVENVTVFGVCSKSKHEALKTN 157 K + ++ V ++ EALKT+ Sbjct: 166 EMCKALGYKSINIVRNRQNIEALKTD 191 >AF125951-1|AAD14690.3| 326|Caenorhabditis elegans Hypothetical protein D2063.1 protein. Length = 326 Score = 32.7 bits (71), Expect = 0.45 Identities = 17/50 (34%), Positives = 25/50 (50%) Query: 10 HRGLNFQDLIVRQGAIDSPPKTPFILGFECAGEIEQVGENVTNFKVGDQV 59 + G+ D+ G K P I G E AG + VG V N+++GD+V Sbjct: 43 YSGICHSDVHTWLGDFHYVSKCPMIGGHEGAGSVISVGSKVKNWQIGDKV 92 Score = 28.7 bits (61), Expect = 7.3 Identities = 14/26 (53%), Positives = 17/26 (65%) Query: 293 LEDVGEAMQKMHDRKNIGKLVLDPSL 318 LEDV E KMHD K ++V+D SL Sbjct: 301 LEDVAEVYTKMHDGKINSRVVVDFSL 326 >AC024200-12|AAF36010.2| 1232|Caenorhabditis elegans Hypothetical protein Y71F9AL.17 protein. Length = 1232 Score = 29.5 bits (63), Expect = 4.2 Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 5/67 (7%) Query: 38 ECAGEIEQVGENVTNFKVGDQVVALPEYRAWAELVSVPAQYVYALPEGMSALDAVAITTN 97 + A ++++ + TN K GD V L E L+SVP V + E A + IT Sbjct: 1014 QLAKKLQKAYQMTTNGKFGDAVEKLREI-----LLSVPLIVVSSKQEVAEAEQLITITRE 1068 Query: 98 YVVAYLL 104 Y+ A LL Sbjct: 1069 YLAALLL 1075 >Z48582-7|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical protein ZK945.9 protein. Length = 3178 Score = 29.1 bits (62), Expect = 5.5 Identities = 21/87 (24%), Positives = 43/87 (49%), Gaps = 4/87 (4%) Query: 140 VTVFGVCSKSKHEALKTNNNNIDHLLERGSDYTSEVRKV-TPDGVDIVLDCLCGEECNRG 198 +T + + ++L + +++D L+ + YT V + DG V+ G G Sbjct: 1364 ITKLANVNMTSAQSLNSVLSSLDLALKGSTVYTLGVSSTKSKDGTYAVI---FGYVIASG 1420 Query: 199 YSLLKPMGRYILYGSSNIVTGETKSFF 225 Y+L+ P +YGS+ +TG+T++ + Sbjct: 1421 YTLVSPRCTLSIYGSTIYLTGDTRASY 1447 >Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical protein ZK945.9 protein. Length = 3178 Score = 29.1 bits (62), Expect = 5.5 Identities = 21/87 (24%), Positives = 43/87 (49%), Gaps = 4/87 (4%) Query: 140 VTVFGVCSKSKHEALKTNNNNIDHLLERGSDYTSEVRKV-TPDGVDIVLDCLCGEECNRG 198 +T + + ++L + +++D L+ + YT V + DG V+ G G Sbjct: 1364 ITKLANVNMTSAQSLNSVLSSLDLALKGSTVYTLGVSSTKSKDGTYAVI---FGYVIASG 1420 Query: 199 YSLLKPMGRYILYGSSNIVTGETKSFF 225 Y+L+ P +YGS+ +TG+T++ + Sbjct: 1421 YTLVSPRCTLSIYGSTIYLTGDTRASY 1447 >Z81570-3|CAB04603.1| 351|Caenorhabditis elegans Hypothetical protein K12G11.4 protein. Length = 351 Score = 28.7 bits (61), Expect = 7.3 Identities = 14/49 (28%), Positives = 23/49 (46%) Query: 10 HRGLNFQDLIVRQGAIDSPPKTPFILGFECAGEIEQVGENVTNFKVGDQ 58 + G+ DL +G + P I G E AG + +G V + +GD+ Sbjct: 43 YSGICHSDLHTWEGDFEYASICPLIGGHEGAGTVVTIGSKVKGWNIGDR 91 >Z49911-3|CAA90126.2| 735|Caenorhabditis elegans Hypothetical protein M28.4 protein. Length = 735 Score = 28.7 bits (61), Expect = 7.3 Identities = 16/35 (45%), Positives = 20/35 (57%) Query: 152 EALKTNNNNIDHLLERGSDYTSEVRKVTPDGVDIV 186 E L+T ++N HL S+YTS V T GV IV Sbjct: 198 EFLRTTSHNFAHLNSFVSNYTSTVVDDTESGVGIV 232 >U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five) interacting proteinprotein 1, isoform d protein. Length = 2350 Score = 28.7 bits (61), Expect = 7.3 Identities = 12/26 (46%), Positives = 19/26 (73%) Query: 154 LKTNNNNIDHLLERGSDYTSEVRKVT 179 L+ N+ IDHL + +D+TS+VR +T Sbjct: 1260 LQAANDRIDHLTKTVNDHTSKVRDLT 1285 >U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five) interacting proteinprotein 1, isoform b protein. Length = 2117 Score = 28.7 bits (61), Expect = 7.3 Identities = 12/26 (46%), Positives = 19/26 (73%) Query: 154 LKTNNNNIDHLLERGSDYTSEVRKVT 179 L+ N+ IDHL + +D+TS+VR +T Sbjct: 1333 LQAANDRIDHLTKTVNDHTSKVRDLT 1358 >U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five) interacting proteinprotein 1, isoform a protein. Length = 2396 Score = 28.7 bits (61), Expect = 7.3 Identities = 12/26 (46%), Positives = 19/26 (73%) Query: 154 LKTNNNNIDHLLERGSDYTSEVRKVT 179 L+ N+ IDHL + +D+TS+VR +T Sbjct: 1333 LQAANDRIDHLTKTVNDHTSKVRDLT 1358 >U97011-2|AAB52325.2| 689|Caenorhabditis elegans Hypothetical protein F31F7.2 protein. Length = 689 Score = 28.3 bits (60), Expect = 9.6 Identities = 11/41 (26%), Positives = 23/41 (56%) Query: 31 TPFILGFECAGEIEQVGENVTNFKVGDQVVALPEYRAWAEL 71 TP I F+ EI+ + + ++ K+G VA+ ++ W+ + Sbjct: 98 TPQITSFQHRAEIDFLRQVMSTMKMGSSKVAMAQFTPWSRI 138 >U41034-8|AAA82382.1| 669|Caenorhabditis elegans Hypothetical protein M02D8.5 protein. Length = 669 Score = 28.3 bits (60), Expect = 9.6 Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 6/71 (8%) Query: 197 RGYSLLKPMGRYILYGSSNIVTGETKSFFSAARAWWQVDKVSPIKLFDENKSLAGLNLRH 256 RGYSL +Y S + + F++A ++W VSP+ + +KSL L Sbjct: 341 RGYSLNNETDSLTVYDSYQHIVVQMMPFYAAFTSFWAT--VSPVNVQFISKSLTAFPLD- 397 Query: 257 LLFQHGRGDTV 267 Q GRG +V Sbjct: 398 ---QIGRGFSV 405 Database: celegans Posted date: Oct 5, 2007 11:13 AM Number of letters in database: 12,573,161 Number of sequences in database: 27,539 Lambda K H 0.317 0.135 0.406 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 8,617,228 Number of Sequences: 27539 Number of extensions: 323569 Number of successful extensions: 657 Number of sequences better than 10.0: 23 Number of HSP's better than 10.0 without gapping: 18 Number of HSP's successfully gapped in prelim test: 5 Number of HSP's that attempted gapping in prelim test: 626 Number of HSP's gapped (non-prelim): 32 length of query: 383 length of database: 12,573,161 effective HSP length: 83 effective length of query: 300 effective length of database: 10,287,424 effective search space: 3086227200 effective search space used: 3086227200 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.6 bits) S2: 60 (28.3 bits)
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