Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001874-TA|BGIBMGA001874-PA|IPR002364|Quinone
oxidoreductase/zeta-crystallin, IPR002085|Alcohol dehydrogenase
superfamily, zinc-containing, IPR000079|High mobility group protein
HMG14 and HMG17, IPR011032|GroES-like, IPR013154|Alcohol dehydrogenase
GroES-like, IPR013149|Alcohol dehydrogenase, zinc-binding
(383 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_15549| Best HMM Match : ADH_zinc_N (HMM E-Value=9.4e-13) 246 2e-65
SB_47786| Best HMM Match : Ank (HMM E-Value=4.4e-30) 100 2e-21
SB_27978| Best HMM Match : HycH (HMM E-Value=0.12) 66 3e-11
SB_43405| Best HMM Match : No HMM Matches (HMM E-Value=.) 63 4e-10
SB_2180| Best HMM Match : DUF293 (HMM E-Value=4.2) 45 9e-05
SB_38647| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.073
SB_58590| Best HMM Match : Polysacc_deac_1 (HMM E-Value=2.6e-08) 34 0.22
SB_37986| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.39
SB_19057| Best HMM Match : ADH_zinc_N (HMM E-Value=5.9e-13) 33 0.51
SB_21791| Best HMM Match : V-set (HMM E-Value=1.4) 30 2.7
SB_45041| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.6
SB_36205| Best HMM Match : ADH_zinc_N (HMM E-Value=0.00092) 30 3.6
SB_44985| Best HMM Match : YhjQ (HMM E-Value=0.37) 29 4.8
SB_59208| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 8.4
SB_54215| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 8.4
SB_36855| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 8.4
>SB_15549| Best HMM Match : ADH_zinc_N (HMM E-Value=9.4e-13)
Length = 562
Score = 246 bits (602), Expect = 2e-65
Identities = 128/309 (41%), Positives = 179/309 (57%), Gaps = 14/309 (4%)
Query: 12 GLNFQDLIVRQGAIDSPPKTPFILGFECAGEIEQVGENVTNFKVGDQVVALPEYRAWAEL 71
G+ F DL+ RQG PK P++ GFEC+G +E++GE VT VG +V+ L Y W E
Sbjct: 76 GVTFADLLQRQGHFPLAPKPPYVCGFECSGVVEELGEEVTGIDVGARVICLAPYGMWTEY 135
Query: 72 VSVPAQYVYALPEGMSALDAVAITTNYVVAYLLLFEMANLTPGKSLLVHSXXXXXXXXXX 131
V A+ Y +PE M+ + AI Y+ A+L+LF + NL KS+LVH
Sbjct: 136 ACVDAKMCYVMPEAMTFEEGAAIPITYLTAHLILFHLGNLGLRKSVLVHMAAGGVGTAVT 195
Query: 132 XXXKTVENVTVFGVCSKSKHEALKTNNNNIDHLLE-RGSDYTSEVRKVTPDGVDIVLDCL 190
K+VE VTVFG S++KHEA++ + H ++ R DY +VR+++PDGVD+VLD L
Sbjct: 196 QICKSVEGVTVFGTASENKHEAIQA--QGVTHPIDYRKEDYVKKVREISPDGVDLVLDPL 253
Query: 191 CGEECNRGYSLLKPMGRYILYGSSNIVTGETKSFFSAARAWWQVDKVSPIKLFDENKSLA 250
G E R Y LLKPMG I YG++ E K F W+ P K+ +N ++
Sbjct: 254 GGSETKRCYDLLKPMGALIHYGNA----AENKGMFK----WFSGASFQPSKMMSDNATVC 305
Query: 251 GLNLRHLLFQHGRGDTVRRAVHSVFTLWAQGKVKPIVDSTWALEDVGEAMQKMHDRKNIG 310
G ++ L QH + + + V L+ +G VKP++DS ALE+ G+AMQKMHDRKNIG
Sbjct: 306 GFSILRLFNQH---ELLNTTMGEVMKLYNEGFVKPVIDSVLALEEAGKAMQKMHDRKNIG 362
Query: 311 KLVLDPSLE 319
K+VL P E
Sbjct: 363 KMVLSPMKE 371
>SB_47786| Best HMM Match : Ank (HMM E-Value=4.4e-30)
Length = 796
Score = 100 bits (240), Expect = 2e-21
Identities = 61/216 (28%), Positives = 106/216 (49%), Gaps = 8/216 (3%)
Query: 12 GLNFQDLIVRQGAIDSPPKT---PFILGFECAGEIEQVGENVTNFKVGDQVVALPEYRAW 68
G+N+ D+ +R G +S K P GFE +G I+ GENVT F++G +V + ++
Sbjct: 48 GVNYADICIRWGLYESAKKFVGWPITPGFEFSGVIQWKGENVTEFEIGQEVFGASLFGSY 107
Query: 69 AELVSVPAQYVYALPEGMSALDAVAITTNYVVAYLLLFEMANLTPGKSLLVHSXXXXXXX 128
+E + VP ++ALP+ MS +A + T + A+ FE+A+ PG +LVHS
Sbjct: 108 SECIRVPKNQLFALPKKMSKNEAAGLPTVALTAWYAFFELAHTRPGAWVLVHSAAGGVGS 167
Query: 129 XXXXXXKTVENVTVFGVCSKSKHEALKTNNNNIDHLLERGS-DYTSEVRKVTPDGVDIVL 187
K + GV + H+ + DH++++ + D E + + PDG V
Sbjct: 168 MLVQMAK-IAGCHAVGVVG-AGHKIDFVRSLGCDHVIDKSAQDLWQEAKVICPDGFSAVF 225
Query: 188 DCLCGEECNRGYSLLKPMGRYILYGSSNIVTGETKS 223
D + Y+ L P G+ ++Y + + GE ++
Sbjct: 226 DANGVATLKQSYAHLAPGGKLVIYAA--VTLGEQEA 259
>SB_27978| Best HMM Match : HycH (HMM E-Value=0.12)
Length = 316
Score = 66.5 bits (155), Expect = 3e-11
Identities = 35/110 (31%), Positives = 61/110 (55%), Gaps = 1/110 (0%)
Query: 13 LNFQDLIVRQGAIDSPPKTPFILGFECAGEIEQVGENVT-NFKVGDQVVALPEYRAWAEL 71
LN D + R+G+ PP ILG E +G +E++G ++ GD+V+AL +AE
Sbjct: 65 LNRADTLQRKGSYPPPPGESEILGLEVSGIVEELGSACNLGWRKGDKVMALVPGGGYAEF 124
Query: 72 VSVPAQYVYALPEGMSALDAVAITTNYVVAYLLLFEMANLTPGKSLLVHS 121
+V +V +P+GMS DA I ++ ++ LL + ++ G +L+H+
Sbjct: 125 AAVQESHVMPIPKGMSQSDAATIPEVWLTSFQLLHLLGDIQQGDKVLIHA 174
Score = 46.4 bits (105), Expect = 4e-05
Identities = 34/134 (25%), Positives = 59/134 (44%), Gaps = 8/134 (5%)
Query: 181 DGVDIVLDCLCGEECNRGYSLLKPMGRYILYGSSNIVTGETKSFFSAARAWWQVDKVSPI 240
+G+D++ DC+ G + L GR+ILYG + R +V+
Sbjct: 181 EGMDLITDCVGGSYWQQNIKALATDGRWILYGLLGGPNVDGNLLGQVLRK-----RVTLK 235
Query: 241 KLFDENKSLAGLNLRHLLFQHGRGDTVRRAVHSVFTLWAQGKVKPIVDSTWALEDVGEAM 300
+S+ LNL ++ Q G A F+ G++KP++DS ++ + EA
Sbjct: 236 GTTLRTRSIKQLNLLFIVVQSKAGQAFTEAAIPHFS---SGELKPLIDSILPMDRIQEAH 292
Query: 301 QKMHDRKNIGKLVL 314
+M N GK+V+
Sbjct: 293 TRMEQNLNTGKIVI 306
>SB_43405| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 549
Score = 62.9 bits (146), Expect = 4e-10
Identities = 48/190 (25%), Positives = 72/190 (37%), Gaps = 3/190 (1%)
Query: 20 VRQGAIDSPPKTPFILGFECAGEIEQVGENVTNFKVGDQVVALPEYR-AWAELVSVPAQY 78
+R G+ P+ PF G AG I +G+ VT KVGD V L ++AE
Sbjct: 306 IRSGSYARLPELPFTPGNYGAGIIHAIGDEVTKHKVGDHVYTLSTLTGSYAEYTVCEEDN 365
Query: 79 VYALPEGMSALDAVAITTNYVVAYLLLFEMANLTPGKSLLVHSXXXXXXXXXXXXXKTVE 138
V+ L + + + Y AY L PG+++LVH +
Sbjct: 366 VFLLHSSLGFSEGANVGITYFTAYRALCHRLGAKPGETVLVHGASGGVGTAAVQIARAY- 424
Query: 139 NVTVFGVCSKSKHEALKTNNNNIDHLLERGSDYTSEVRKVTP-DGVDIVLDCLCGEECNR 197
+ V G SK E L R +YT + + T G D++L+ L +
Sbjct: 425 GMHVIGTAGSSKGEELVRQAGAHHVFNHRELNYTQGILEATDGQGPDVILEMLANVNLAK 484
Query: 198 GYSLLKPMGR 207
L+ GR
Sbjct: 485 DLDLVSNGGR 494
>SB_2180| Best HMM Match : DUF293 (HMM E-Value=4.2)
Length = 289
Score = 45.2 bits (102), Expect = 9e-05
Identities = 28/107 (26%), Positives = 52/107 (48%), Gaps = 1/107 (0%)
Query: 13 LNFQDLIVRQGAIDSPPKTPFILGFECAGEIEQVGENVTNFKVGDQVV-ALPEYRAWAEL 71
+N D+ + QG+ P P + G E G++ ++G+ V K GD V+ A +W
Sbjct: 83 VNPSDINMIQGSYAIKPALPAVGGNEGCGQVIKMGKEVKGVKEGDFVILAESGLGSWTRY 142
Query: 72 VSVPAQYVYALPEGMSALDAVAITTNYVVAYLLLFEMANLTPGKSLL 118
+ V +P+ +S A ++ N AY +L + +L PG +++
Sbjct: 143 HVLSEDQVIKVPDYISVEMAATLSVNPCTAYRMLKDFEHLKPGDTVI 189
>SB_38647| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 395
Score = 35.5 bits (78), Expect = 0.073
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 10 HRGLNFQDLIVRQGAIDSPPKTPFILGFECAGEIEQVGENVTNFKVGDQVVALP 63
+ G+ +DL + +G + P +LG E +G + VG +V N +GD+VV P
Sbjct: 82 YSGICDRDLQILEGEL--PAAKCVVLGHEFSGVVSDVGSDVKNVSIGDRVVVNP 133
>SB_58590| Best HMM Match : Polysacc_deac_1 (HMM E-Value=2.6e-08)
Length = 893
Score = 33.9 bits (74), Expect = 0.22
Identities = 33/173 (19%), Positives = 64/173 (36%), Gaps = 4/173 (2%)
Query: 40 AGEIEQVGENVTNFKVGDQVVALPEYRAWAELVSVPAQYVYALPEGMSALDAVAITTNYV 99
+G + + FK D+V + E V + P+G++ + A + N +
Sbjct: 175 SGVVTGANSTSSRFKTNDRVCGIMSPCRVGEKVRCKEARLMTQPQGLNGMQAATLPINII 234
Query: 100 VAYLLLFEMANLTPGKSLLVHSXXXXXXXXXXXXXKTVENVTVFGVCSKSKHEALKT--N 157
+A+ +L + LL+H + + TV +K+ + +KT
Sbjct: 235 LAWKILSRALSDKKSAFLLIHEGDTGAGYTATAMANAMGHRTVCST-TKTGDQTMKTLLQ 293
Query: 158 NNNIDHLLERGSDYTSEVRKVTPDGVDIVLDCLCGEECNRGYSLLKPMGRYIL 210
+ ++ +L+ E D V I L R YS LK G+ ++
Sbjct: 294 DVGVEAILDSNCFLLGEEYDNQFDAV-IFLSNPQAWSMKRSYSALKSNGKLVV 345
>SB_37986| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 348
Score = 33.1 bits (72), Expect = 0.39
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 17 DLIVRQGAIDSPPKTPFILGFECAGEIEQVGENVTNFKVGDQVVALP 63
DL V +G ID ILG + G ++++G +V + VGD+VV P
Sbjct: 41 DLHVLEGRIDCAKS--IILGHQFVGIVKEIGADVQHVSVGDRVVINP 85
>SB_19057| Best HMM Match : ADH_zinc_N (HMM E-Value=5.9e-13)
Length = 303
Score = 32.7 bits (71), Expect = 0.51
Identities = 15/32 (46%), Positives = 20/32 (62%)
Query: 32 PFILGFECAGEIEQVGENVTNFKVGDQVVALP 63
P +LG E +G I VGE V++ K GD+V P
Sbjct: 52 PMVLGHESSGVICAVGEGVSDLKEGDRVAIEP 83
>SB_21791| Best HMM Match : V-set (HMM E-Value=1.4)
Length = 474
Score = 30.3 bits (65), Expect = 2.7
Identities = 14/34 (41%), Positives = 19/34 (55%)
Query: 192 GEECNRGYSLLKPMGRYILYGSSNIVTGETKSFF 225
GE NR SL GRY++ GS++ V + FF
Sbjct: 126 GEHLNRECSLFTDDGRYVIVGSASYVPEDPHPFF 159
>SB_45041| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1278
Score = 29.9 bits (64), Expect = 3.6
Identities = 24/117 (20%), Positives = 48/117 (41%), Gaps = 3/117 (2%)
Query: 99 VVAYLLLFEMANLTPGKS--LLVHSXXXXXXXXXXXXXKTVENVTVFGVC-SKSKHEALK 155
+ + + L E ++ PG++ ++V K + G+C S+ K + +K
Sbjct: 143 LTSLIALQERGHIVPGQNQTVVVTGAAGACGSAAGQIAKIFGCGKLVGICGSEEKCQYIK 202
Query: 156 TNNNNIDHLLERGSDYTSEVRKVTPDGVDIVLDCLCGEECNRGYSLLKPMGRYILYG 212
+ ++ + E+RK P G+D+ D + GE N L+ I+ G
Sbjct: 203 ELGFDSSINYKQVDNMAEELRKHCPQGIDVYFDNVGGEISNEIIRLMNKNSHVIICG 259
>SB_36205| Best HMM Match : ADH_zinc_N (HMM E-Value=0.00092)
Length = 676
Score = 29.9 bits (64), Expect = 3.6
Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Query: 10 HRGLNFQDLIVRQGAIDSPPKTPFILGFECAGEIEQVGENVT-NFKVGDQVVALPEYRAW 68
+ G+N D+ G K PF G E GE+ G++ F VG Q V + +
Sbjct: 47 YAGINATDINHTAGRYKPWNKPPFDAGLEGLGEVVATGKDYKGKFSVG-QPVMFMRFGGF 105
Query: 69 AELVSVPAQYVYALP 83
AE V++ + + +P
Sbjct: 106 AEYVTLTEKDIVPVP 120
>SB_44985| Best HMM Match : YhjQ (HMM E-Value=0.37)
Length = 1376
Score = 29.5 bits (63), Expect = 4.8
Identities = 23/94 (24%), Positives = 43/94 (45%), Gaps = 6/94 (6%)
Query: 210 LYGSSNIVTGETKSFFSAARAWWQV-DKVSPIKLFDENKSLAGLNLRHLLFQHGRGDTVR 268
L+ + +++G T++ F A V D++ + L N + + LL + G V+
Sbjct: 246 LWMETMVISG-TEALFGVLTAQEPVPDELRDVALTAVNHLASHAQMAQLLIEFGLDGVVQ 304
Query: 269 RAVHSVFT----LWAQGKVKPIVDSTWALEDVGE 298
H V L+++ K K D W++E+V E
Sbjct: 305 SLAHKVLRKLCELYSEEKNKSDCDHHWSMEEVSE 338
>SB_59208| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 584
Score = 28.7 bits (61), Expect = 8.4
Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Query: 249 LAGLNLRHLLFQHGRGDTVRRAVHSVFTLWAQGKVKPIVDSTWALEDVGEAMQKMHDRKN 308
LA ++ +L G + S+F A G V P ++ EA+Q +HDR+
Sbjct: 262 LASPDIEKMLMSLQSGISASPTPGSLFNSTAHGPVNPPTTEQYS-RGFTEALQDLHDRQA 320
Query: 309 IGKLVLD 315
G+ ++D
Sbjct: 321 SGESLID 327
>SB_54215| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 695
Score = 28.7 bits (61), Expect = 8.4
Identities = 30/94 (31%), Positives = 45/94 (47%), Gaps = 9/94 (9%)
Query: 174 EVRKVTPDGVDIVLDCLCGEECNRGY-SLLKP---MGRYILYGSSNIVTGETKSFFSAAR 229
E+ VTP+G+ +LD G + G L +P +GR G I+ + R
Sbjct: 40 EIHLVTPEGLRPMLDV--GLYGSVGVMELFRPPDRIGRPSDTGQIGIIDPSCRVI--GLR 95
Query: 230 AWWQVDKVSPIKLFDENKSLAGLNLRHLLFQHGR 263
+ + KV P++L D +K L N+R LL HGR
Sbjct: 96 LYDGLFKVIPLEL-DSDKELKAFNIRLLLDPHGR 128
>SB_36855| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 115
Score = 28.7 bits (61), Expect = 8.4
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 266 TVRRAVHSVFTLWAQGKVKPIVDSTWALEDVGEAMQKMH 304
T+ H F ++ K K +VDSTW ++D E+ K H
Sbjct: 77 TIHNKTHIYFDQFSVDK-KMVVDSTWLIKDRHESYFKAH 114
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.317 0.135 0.406
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,703,364
Number of Sequences: 59808
Number of extensions: 431100
Number of successful extensions: 734
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 713
Number of HSP's gapped (non-prelim): 20
length of query: 383
length of database: 16,821,457
effective HSP length: 83
effective length of query: 300
effective length of database: 11,857,393
effective search space: 3557217900
effective search space used: 3557217900
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 61 (28.7 bits)
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