GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001874-TA|BGIBMGA001874-PA|IPR002364|Quinone
oxidoreductase/zeta-crystallin, IPR002085|Alcohol dehydrogenase
superfamily, zinc-containing, IPR000079|High mobility group protein
HMG14 and HMG17, IPR011032|GroES-like, IPR013154|Alcohol dehydrogenase
GroES-like, IPR013149|Alcohol dehydrogenase, zinc-binding
         (383 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ370038-1|ABD18599.1|  122|Anopheles gambiae putative TIL domai...    25   2.6  
AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.           25   4.6  

>DQ370038-1|ABD18599.1|  122|Anopheles gambiae putative TIL domain
           polypeptide protein.
          Length = 122

 Score = 25.4 bits (53), Expect = 2.6
 Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 3/42 (7%)

Query: 160 NIDHLLERG--SDYTSEVRKVTPDGVDIVLDCLCGEECNRGY 199
           NI    E+G   +Y    + V PD     ++C+CGEE +R Y
Sbjct: 57  NIGCFCEKGYVREYLDGGKCVRPDTY-FRINCICGEEYDREY 97


>AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.
          Length = 897

 Score = 24.6 bits (51), Expect = 4.6
 Identities = 11/40 (27%), Positives = 22/40 (55%)

Query: 271 VHSVFTLWAQGKVKPIVDSTWALEDVGEAMQKMHDRKNIG 310
           +H   T   +  +  I+DST+++E+    + K+H+ K  G
Sbjct: 644 LHRSLTWILENNITGIIDSTFSVENNSFGVLKVHELKPNG 683


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.317    0.135    0.406 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 361,544
Number of Sequences: 2123
Number of extensions: 13360
Number of successful extensions: 18
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 17
Number of HSP's gapped (non-prelim): 2
length of query: 383
length of database: 516,269
effective HSP length: 65
effective length of query: 318
effective length of database: 378,274
effective search space: 120291132
effective search space used: 120291132
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 49 (23.8 bits)