Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001872-TA|BGIBMGA001872-PA|IPR000238|Ribosome-binding
factor A
(301 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000D566E2 Cluster: PREDICTED: similar to CG15916-PA... 188 1e-46
UniRef50_Q16IL9 Cluster: Putative uncharacterized protein; n=1; ... 171 2e-41
UniRef50_UPI00015B5B21 Cluster: PREDICTED: similar to conserved ... 155 1e-36
UniRef50_A0ND80 Cluster: ENSANGP00000030532; n=2; Anopheles gamb... 124 2e-27
UniRef50_Q8SXX0 Cluster: RH08992p; n=1; Drosophila melanogaster|... 123 7e-27
UniRef50_Q28J07 Cluster: Novel protein; n=1; Xenopus tropicalis|... 98 3e-19
UniRef50_Q29CQ7 Cluster: GA14024-PA; n=1; Drosophila pseudoobscu... 98 3e-19
UniRef50_A4IGC4 Cluster: Zgc:162590 protein; n=2; Danio rerio|Re... 89 2e-16
UniRef50_Q6P3B9 Cluster: Putative ribosome-binding factor A, mit... 81 3e-14
UniRef50_Q8N0V3 Cluster: Putative ribosome-binding factor A, mit... 75 2e-12
UniRef50_Q5ZM82 Cluster: Putative uncharacterized protein; n=5; ... 74 4e-12
UniRef50_UPI0001555E0C Cluster: PREDICTED: hypothetical protein;... 74 5e-12
UniRef50_UPI0000F2C784 Cluster: PREDICTED: similar to Chromosome... 73 7e-12
UniRef50_Q8N0V3-2 Cluster: Isoform 2 of Q8N0V3 ; n=2; Catarrhini... 45 0.002
UniRef50_Q7NY12 Cluster: Ribosome-binding factor A; n=5; Neisser... 45 0.003
UniRef50_Q18170 Cluster: Putative uncharacterized protein; n=2; ... 42 0.026
UniRef50_Q8GV43 Cluster: Phosphoinositide-specific phospholipase... 38 0.24
UniRef50_A4RM25 Cluster: Putative uncharacterized protein; n=1; ... 38 0.42
UniRef50_Q6A7M9 Cluster: Ribosome-binding factor A; n=3; Actinom... 37 0.55
UniRef50_P25588 Cluster: Mediator of replication checkpoint prot... 37 0.55
UniRef50_A0NL42 Cluster: Ribosome binding factor A; n=2; Oenococ... 37 0.73
UniRef50_Q1K0G2 Cluster: Ribosome-binding factor A; n=1; Desulfu... 36 1.3
UniRef50_A0BM71 Cluster: Chromosome undetermined scaffold_115, w... 36 1.3
UniRef50_Q8RA38 Cluster: Ribosome-binding factor A; n=5; Clostri... 36 1.3
UniRef50_UPI000065E7D3 Cluster: Homolog of Homo sapiens "Splice ... 36 1.7
UniRef50_A4FVS5 Cluster: At1g75730; n=3; Arabidopsis thaliana|Re... 35 2.2
UniRef50_A3VQI0 Cluster: Ribosome-binding factor A; n=1; Parvula... 35 3.0
UniRef50_A7R536 Cluster: Chromosome undetermined scaffold_848, w... 35 3.0
UniRef50_A0CGV3 Cluster: Chromosome undetermined scaffold_18, wh... 35 3.0
UniRef50_UPI0000E48A19 Cluster: PREDICTED: similar to XL-INCENP ... 34 5.2
UniRef50_Q03WH5 Cluster: Ribosome-binding factor A; n=1; Leucono... 34 5.2
UniRef50_A5Z671 Cluster: Putative uncharacterized protein; n=1; ... 34 5.2
UniRef50_A3IT45 Cluster: Type IIS restriction-modification prote... 34 5.2
UniRef50_A0YNW9 Cluster: Sensor protein; n=1; Lyngbya sp. PCC 81... 34 5.2
UniRef50_A4YHB2 Cluster: SpoVT/AbrB domain protein; n=2; Sulfolo... 34 5.2
UniRef50_P65971 Cluster: Ribosome-binding factor A; n=17; Lactob... 34 5.2
UniRef50_Q12H64 Cluster: ABC transporter related; n=2; Proteobac... 33 6.8
UniRef50_Q54JL6 Cluster: Putative uncharacterized protein; n=1; ... 33 6.8
UniRef50_Q22KL9 Cluster: Leucine Rich Repeat family protein; n=1... 33 6.8
UniRef50_Q6BZT5 Cluster: Yarrowia lipolytica chromosome F of str... 33 6.8
UniRef50_A2F208 Cluster: Putative uncharacterized protein; n=1; ... 33 9.0
UniRef50_Q6BWA8 Cluster: Similar to sp|P25301 Saccharomyces cere... 33 9.0
UniRef50_A7ELW6 Cluster: Putative uncharacterized protein; n=1; ... 33 9.0
>UniRef50_UPI0000D566E2 Cluster: PREDICTED: similar to CG15916-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG15916-PA - Tribolium castaneum
Length = 323
Score = 188 bits (459), Expect = 1e-46
Identities = 98/256 (38%), Positives = 157/256 (61%), Gaps = 4/256 (1%)
Query: 1 MPSVKSLTKVTHEPGKRG-IRRVAMLNKMFMKHITDLMSTGTVSMDIIGRGIEISKVNVT 59
+P+V+S +K + E G RRV++LNK+FM+HITDL++TG S + G IEI++V +
Sbjct: 25 LPTVESFSKGSLEGKFSGNARRVSVLNKLFMRHITDLIATGEYSSEFEGHEIEINRVQIA 84
Query: 60 SDFQTVHVYWICKGTSTDEETEATLNSVAGALRHELSVLRIMGQVPYIVFVKDMHEARIL 119
D++ ++V+W+ KGT DE E L AG LRHELS LR+MG VP I FVKD H A+I
Sbjct: 85 PDYKGLNVFWVAKGTQDDEVVEKLLKKNAGFLRHELSSLRVMGAVPMIHFVKDKHHAKIA 144
Query: 120 DLDNRLLKADFGENYTPTDPGHLLKTEFTLDTKISPDIKAKIRQLE---IDEPSQESPIP 176
+LD RL KADFG+++ PT+ LK++ L T + ++K +++ +E +DE +E +P
Sbjct: 145 ELDIRLAKADFGDDHVPTEMAAKLKSQLELFTSLPSNVKEQLQNVENELLDEIIEEEELP 204
Query: 177 EMTHTIYGLDHAKIMNRLLTARKKSKDAWSNLESESPVISYRIHESTPIKVDTVTQNKEL 236
M + GLD ++I+NR+ KK+ + ES + ++ ++E+ +
Sbjct: 205 PMPQDVLGLDRSQILNRIKRNMKKAAASHRFTTEESDLEAHSVNENPIEYASNKERRAAF 264
Query: 237 AEFLLKRQILQNKLAK 252
FL KR+++++K K
Sbjct: 265 KNFLEKRELMRSKERK 280
>UniRef50_Q16IL9 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 357
Score = 171 bits (415), Expect = 2e-41
Identities = 87/212 (41%), Positives = 129/212 (60%), Gaps = 3/212 (1%)
Query: 3 SVKSLTKVTHEPGKRGIRRVAMLNKMFMKHITDLMSTGTVSMDIIGRGIEISKVNVTSDF 62
S S T GK RR+ +LNK+FM+ ITDLM+TG S +I+G GI+IS+V V++DF
Sbjct: 59 STPSSLASTRGQGKESTRRLTVLNKLFMEQITDLMATGEYSEEIVGYGIQISRVRVSTDF 118
Query: 63 QTVHVYWICKGTSTDEETEATLNSVAGALRHELSVLRIMGQVPYIVFVKDMHEARILDLD 122
V+V+W ++ D E L VAG LRHELS LR++GQVP + FVKD D+D
Sbjct: 119 HGVNVFWFASDSAQDMEIGRLLKRVAGGLRHELSQLRLIGQVPKLTFVKDKTHGLSADVD 178
Query: 123 NRLLKADFGENYTPTDPGHLLKTEFTLDTKISPDIKAKIRQL--EIDEPSQE-SPIPEMT 179
+ L AD+GE+Y T+ + ++E L T + +++ KI ++ EI P + P+P+M
Sbjct: 179 SALRIADYGEDYEFTNRTLVPRSEIKLQTDLPSEVRRKIGEIENEIQYPRDDHDPLPDMR 238
Query: 180 HTIYGLDHAKIMNRLLTARKKSKDAWSNLESE 211
H + GL+H IM+++ + KSK AW +E
Sbjct: 239 HDVLGLNHGMIMSKIKRSLNKSKQAWHQYNNE 270
>UniRef50_UPI00015B5B21 Cluster: PREDICTED: similar to conserved
hypothetical protein; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to conserved hypothetical protein -
Nasonia vitripennis
Length = 338
Score = 155 bits (377), Expect = 1e-36
Identities = 89/238 (37%), Positives = 138/238 (57%), Gaps = 6/238 (2%)
Query: 20 RRVAMLNKMFMKHITDLMSTGTVSMDIIGRGIEISKVNVTSDFQTVHVYWICKG-TSTDE 78
RRV +LNK+FMK+ITDLM++G V+ +IGRGIE+S V+VT DF+ V+V+W + +E
Sbjct: 65 RRVTVLNKVFMKYITDLMASGEVAAQLIGRGIEVSHVSVTPDFKLVNVFWFAQNEIDANE 124
Query: 79 ETEATLNSVAGALRHELSVLRIMGQVPYIVFVKDMHEARILDLDNRLLKADFGENYTPTD 138
TE L AG L+HELS LR++G VP I FVK+ + + ++++RL DFGE++ P+
Sbjct: 125 STERILKRAAGQLQHELSQLRVIGIVPPINFVKNRLHSAVKEVESRLATVDFGEDFVPSA 184
Query: 139 PGHLLKTEFTLDTKISPDIKAKIRQLEIDEPSQESPIPEMTHTIYGLDHAKIMNRLLTAR 198
L +SP+IKAK+ L + E IPEM + G +H+ IM R+ +
Sbjct: 185 YIKSQIRPPVLQMSLSPEIKAKLSAL---DKIYEIKIPEMKQDVMGFNHSAIMKRIKASL 241
Query: 199 KKSKDAWSNLESESPVISYRIHESTPIKVDTVTQNKELAEFLLKRQILQNKLAKQLRK 256
K+K A + + P + +P V T NKE + +L L+ ++ ++ R+
Sbjct: 242 NKTKLAEQRVIVDIPQEPQGNSQVSPADVATFLDNKE--QQILFNDFLKKRMVEEKRR 297
>UniRef50_A0ND80 Cluster: ENSANGP00000030532; n=2; Anopheles gambiae
str. PEST|Rep: ENSANGP00000030532 - Anopheles gambiae
str. PEST
Length = 263
Score = 124 bits (300), Expect = 2e-27
Identities = 81/202 (40%), Positives = 111/202 (54%), Gaps = 25/202 (12%)
Query: 5 KSLTKVTHEPGKRGIRRVAMLNKMFMKHITDLMSTGTVSMDIIGRGIEISKVNVTSDFQT 64
KSL T GK RRVA+LNK+FMK+ITDLM+TG+ + D+ G GI+IS+V V DF+
Sbjct: 56 KSLAS-TKRQGKESNRRVAVLNKLFMKNITDLMATGSFASDLYGYGIQISRVRVAPDFRE 114
Query: 65 VHVYWICKGTSTDEETEATLNSVAGALRHELSVLRIMGQVPYIVFVKDMHEARILDLDNR 124
+YW + D + + L + +RHELS LR+MG+VP + FV+D + L N
Sbjct: 115 ASIYWFSTNLNRDVKIDGILKPLCSRIRHELSQLRLMGEVPQLTFVQD-KRYYVEGLLNS 173
Query: 125 LLK-ADFGENYTPTDPGHLLKTEFTLDTKISPDIKAKIRQLEIDEPSQESPIPEMTHTIY 183
LLK AD+GE + LL P+ D+ E PEM H I
Sbjct: 174 LLKEADYGEENANVEQDVLLP---------KPE----------DQCLCE---PEMRHDIL 211
Query: 184 GLDHAKIMNRLLTARKKSKDAW 205
GLDHA+IM+R+ + K+ AW
Sbjct: 212 GLDHAQIMSRVRQSVDKTNKAW 233
>UniRef50_Q8SXX0 Cluster: RH08992p; n=1; Drosophila
melanogaster|Rep: RH08992p - Drosophila melanogaster
(Fruit fly)
Length = 271
Score = 123 bits (296), Expect = 7e-27
Identities = 65/188 (34%), Positives = 107/188 (56%), Gaps = 18/188 (9%)
Query: 20 RRVAMLNKMFMKHITDLMSTGTVSMDIIGRGIEISKVNVTSDFQTVHVYWICKGTSTDEE 79
RR+++LNK+FM +ITD+++TG V+ I+G G++IS V +TSDF ++VYW+ K ++E
Sbjct: 94 RRMSVLNKLFMTNITDILATGAVADSIVGHGVQISYVKITSDFSRINVYWMGKDGGENQE 153
Query: 80 TEATLNSVAGALRHELSVLRIMGQVPYIVFVKDMHEARILDLDNRLLKADFGENYTPTDP 139
E TLN ++G L+HELS L +MG+VP I FV+D + + L K D +Y+
Sbjct: 154 LENTLNRMSGKLQHELSQLHLMGEVPKIKFVRDKTSTGLHQVHEVLSKIDLQHSYS---- 209
Query: 140 GHLLKTEFTLDTKISPDIKAKIRQLEIDEPSQESPIPEMTHTIYGLDHAKIMNRLLTARK 199
S + + + + + + + PEM +H+ +M+++L +
Sbjct: 210 --------------SSNAEVEESDAQSCQTAADEEWPEMRQDFLSFNHSLVMDKILGKMR 255
Query: 200 KSKDAWSN 207
KSKDAW N
Sbjct: 256 KSKDAWVN 263
>UniRef50_Q28J07 Cluster: Novel protein; n=1; Xenopus
tropicalis|Rep: Novel protein - Xenopus tropicalis
(Western clawed frog) (Silurana tropicalis)
Length = 284
Score = 97.9 bits (233), Expect = 3e-19
Identities = 46/133 (34%), Positives = 75/133 (56%), Gaps = 1/133 (0%)
Query: 3 SVKSLTKVTHEPGKRGIRRVAMLNKMFMKHITDLMSTGTVSMDIIGRGIEISKVNVTSDF 62
S+ SL KV + + R+ LN + K +TDL+ T +S ++ +E+SKV+V++DF
Sbjct: 83 SLASLMKVQRKEKREDSVRIRALNSILYKALTDLLQTSAISQEVCDLNVELSKVSVSADF 142
Query: 63 QTVHVYWICKGT-STDEETEATLNSVAGALRHELSVLRIMGQVPYIVFVKDMHEARILDL 121
YW+ G TD + E L A RH + +++G VP +VFV+D +A + ++
Sbjct: 143 LVCRAYWMTSGNLDTDNQIELVLQKYAPQFRHLMLTHQVLGSVPQVVFVRDKEDAMVQEV 202
Query: 122 DNRLLKADFGENY 134
+ L ADFGEN+
Sbjct: 203 ERLLAIADFGENH 215
>UniRef50_Q29CQ7 Cluster: GA14024-PA; n=1; Drosophila
pseudoobscura|Rep: GA14024-PA - Drosophila pseudoobscura
(Fruit fly)
Length = 270
Score = 97.9 bits (233), Expect = 3e-19
Identities = 61/193 (31%), Positives = 103/193 (53%), Gaps = 25/193 (12%)
Query: 16 KRGIRRVAMLNKMFMKHITDLMSTGTVSMDIIGRGIEISKVNVTSDFQTVHVYWICKGTS 75
K RR+++LNK+FM ITD++STG I+G G+ +++V ++SDF ++VYW+ G +
Sbjct: 94 KHNTRRISVLNKLFMTKITDMLSTGAAVQSIVGLGLHVTRVKISSDFSHINVYWL--GRT 151
Query: 76 TDEE---TEATLNSVAGALRHELSVLRIMGQVPYIVFVKDMHEARILDLDNRLLKADFGE 132
++E E L + L+HEL+ LR+MG++P I FV+D + L L +
Sbjct: 152 DEQEGGALETELWRYSSQLQHELTQLRLMGKMPRIKFVRDKTANNLYQLRGILSNLNLNT 211
Query: 133 NYTPTDPGHLLKTEFTLDTKISPDIKAKIRQLEIDEPSQESPIPEMTHTIYGLDHAKIMN 192
HLL T+ D A+ + L S P P+M + L+H +I++
Sbjct: 212 --------HLL-------TRKCMDYSARQKVL-----STYMPWPKMRQNVLELNHTRIVD 251
Query: 193 RLLTARKKSKDAW 205
+++ +K K+AW
Sbjct: 252 KIICKMRKLKEAW 264
>UniRef50_A4IGC4 Cluster: Zgc:162590 protein; n=2; Danio rerio|Rep:
Zgc:162590 protein - Danio rerio (Zebrafish)
(Brachydanio rerio)
Length = 285
Score = 88.6 bits (210), Expect = 2e-16
Identities = 70/252 (27%), Positives = 125/252 (49%), Gaps = 37/252 (14%)
Query: 13 EPGKRGIR---RVAMLNKMFMKHITDLMSTGTVSMDIIGRGIEISKVNVTSDFQTVHVYW 69
+P KR + RV LN + K +TDL+S+ ++ +I +EISKV++T DF +YW
Sbjct: 27 KPPKRNVEDSVRVRTLNIIIYKTVTDLLSSYELNSEISAYNVEISKVSLTKDFSACRIYW 86
Query: 70 ICK-GTSTDEETEATLNSVAGALRHELSVLRIMGQVPYIVFVKDMHEARILDLDNRLLKA 128
D +T+ L+ A +RH L +++G VP +VFV+D A + +++N L +A
Sbjct: 87 KTSLSAEQDRQTQQALDKCAPRIRHLLVSHQLIGNVPPVVFVRDKQYAVVTEIENLLKQA 146
Query: 129 DFGENYTPTDPGHLLKTEFTLDTKISPDIKAKIRQLEIDEPSQESPIPEMTHTIYGLDHA 188
DFG TE ++ D +AK++ L D ++ P+ ++G+DH
Sbjct: 147 DFG------------PTEDNINHSAMSDKQAKLQPL--DSGDKKRPV------LFGVDH- 185
Query: 189 KIMNRLLTARKKSKDAWSNLESESPVISYRIHESTPIKVDTVTQNKELAEFLLKRQILQN 248
+++ + A K+ K A ++ E+P E ++DT+ + K+++++
Sbjct: 186 DALHKQIEAYKREKGARDSI-IENPAAGRLTQE----QLDTLAD-------IRKQKLIEK 233
Query: 249 KLAKQLRKTSDD 260
K K R DD
Sbjct: 234 KKQKSKRMKDDD 245
>UniRef50_Q6P3B9 Cluster: Putative ribosome-binding factor A,
mitochondrial precursor; n=5; Murinae|Rep: Putative
ribosome-binding factor A, mitochondrial precursor - Mus
musculus (Mouse)
Length = 350
Score = 81.4 bits (192), Expect = 3e-14
Identities = 48/128 (37%), Positives = 72/128 (56%), Gaps = 4/128 (3%)
Query: 7 LTKVTHEPG-KRGIRRVAMLNKMFMKHITDLMSTGTVSMDIIGRGIEISKVNVTSDFQTV 65
LTK T + K R+ +LN + K +T+L+ T VS ++ +E+SKV+VTSDF
Sbjct: 79 LTKTTSKKTRKEDSIRLRVLNGLLYKSLTELLCTPQVSQEVYDLNVELSKVSVTSDFSAC 138
Query: 66 HVYWICKGTSTDE--ETEATLNSVAGALRHELSVLRIMGQVPYIVFVKDMHEARILDLDN 123
VYW G S ++ TE+ L A +RH L + + VP IVFV+D + + ++D
Sbjct: 139 RVYW-KTGVSAEQNKHTESVLQRSAAYMRHLLISQQTLRNVPPIVFVQDKRDLVLAEVDR 197
Query: 124 RLLKADFG 131
L +ADFG
Sbjct: 198 LLAEADFG 205
>UniRef50_Q8N0V3 Cluster: Putative ribosome-binding factor A,
mitochondrial precursor; n=16; Amniota|Rep: Putative
ribosome-binding factor A, mitochondrial precursor -
Homo sapiens (Human)
Length = 343
Score = 74.9 bits (176), Expect = 2e-12
Identities = 44/114 (38%), Positives = 62/114 (54%), Gaps = 5/114 (4%)
Query: 21 RVAMLNKMFMKHITDLMSTGTVSMDIIGRGIEISKVNVTSDFQTVHVYWICKGTSTDEET 80
R+ LN + K +TDL+ T VS ++ +E+SKV++T DF YW K T + E+
Sbjct: 92 RLRALNGLLYKALTDLLCTPEVSQELYDLNVELSKVSLTPDFSACRAYW--KTTLSAEQN 149
Query: 81 ---EATLNSVAGALRHELSVLRIMGQVPYIVFVKDMHEARILDLDNRLLKADFG 131
EA L A +RH L + + VP IVFV+D A + +LD L ADFG
Sbjct: 150 AHMEAVLQRSAAHMRHLLMSQQTLRNVPPIVFVQDKGNAALAELDQLLAVADFG 203
>UniRef50_Q5ZM82 Cluster: Putative uncharacterized protein; n=5;
Gallus gallus|Rep: Putative uncharacterized protein -
Gallus gallus (Chicken)
Length = 329
Score = 74.1 bits (174), Expect = 4e-12
Identities = 39/112 (34%), Positives = 63/112 (56%), Gaps = 1/112 (0%)
Query: 21 RVAMLNKMFMKHITDLMSTGTVSMDIIGRGIEISKVNVTSDFQTVHVYWICKGTS-TDEE 79
R +LN + K +T++MS+ ++ ++ +EI KV++ S+F VYW TS +D
Sbjct: 78 RCKVLNGLIHKAVTEMMSSCEINKEVYDLKLEICKVSLASNFSACRVYWNPASTSISDNY 137
Query: 80 TEATLNSVAGALRHELSVLRIMGQVPYIVFVKDMHEARILDLDNRLLKADFG 131
E L A +R+ L +I+G VP +VFVKD A + +++ L ADFG
Sbjct: 138 IEGVLRKSAPRIRYLLMSQQILGNVPPVVFVKDKEAAAVKEIEELLAVADFG 189
>UniRef50_UPI0001555E0C Cluster: PREDICTED: hypothetical protein;
n=1; Ornithorhynchus anatinus|Rep: PREDICTED:
hypothetical protein - Ornithorhynchus anatinus
Length = 328
Score = 73.7 bits (173), Expect = 5e-12
Identities = 45/139 (32%), Positives = 73/139 (52%), Gaps = 7/139 (5%)
Query: 4 VKSLTKVTHEPGKRGIRRVAMLNKMFMKHITDLMSTGTVSMDIIGRGIEISKVNVTSDFQ 63
VK++ T + + IR+ A L+ + + +TDL+S + D+ +E++KV+++ DF
Sbjct: 11 VKAVAPKTRK--EESIRKRA-LDGLLYQALTDLVSNWEIDGDLYDLNVELTKVSLSPDFS 67
Query: 64 TVHVYW-ICKGTSTDEETEATLNSVAGALRHELSVLRIMGQVPYIVFVKDMHEARILDLD 122
VYW ++ EA L A +RH L RI+ VP +VFV+D +A +++
Sbjct: 68 VCRVYWKTVPSVEKNDHVEAVLRKTAPRMRHLLITQRILQNVPPVVFVRDREDAARSEVE 127
Query: 123 NRLLKADFGENYTPTDPGH 141
L ADFG P D GH
Sbjct: 128 RLLRVADFG---PPEDQGH 143
>UniRef50_UPI0000F2C784 Cluster: PREDICTED: similar to Chromosome 18
open reading frame 22; n=1; Monodelphis domestica|Rep:
PREDICTED: similar to Chromosome 18 open reading frame
22 - Monodelphis domestica
Length = 391
Score = 73.3 bits (172), Expect = 7e-12
Identities = 59/206 (28%), Positives = 104/206 (50%), Gaps = 26/206 (12%)
Query: 3 SVKSLTKVTHEPGKR--GIRRVAMLNKMFMKHITDLMSTGTVSMDIIGRGIEISKVNVTS 60
S +SL K T + ++ IR+ A L+ + + ++DLM T V+ DI +E SKV++
Sbjct: 102 SWESLKKHTSKKTRKEDSIRKRA-LDGILYQALSDLMCTFEVNQDIYDLNVEFSKVSLAP 160
Query: 61 DFQTVHVYWICK-GTSTDEETEATLNSVAGALRHELSVLRIMGQVPYIVFVKDMHEARIL 119
DF VYW ++ EA L A +RH L +++ VP IVF++D A I
Sbjct: 161 DFSACRVYWKTSLSAEQNDHIEAVLQKSASRIRHLLITHQVLRNVPPIVFIRDKESAAIA 220
Query: 120 DLDNRLLK-ADFGENYTPTDPGHLLKTEFTLDTKISPDIKAKIRQLEIDEPSQESPIPEM 178
++ NRLL+ ADFG P D L++++ +R+ E ++ S + E
Sbjct: 221 EI-NRLLEIADFG----PPDEKDLIQSD--------------LRKSEASLATETSHVSES 261
Query: 179 T--HTIYGLDHAKIMNRLLTARKKSK 202
T +++G+DH + +++ ++ +
Sbjct: 262 TVQPSLFGIDHEALHKQIMEYKRNKR 287
>UniRef50_Q8N0V3-2 Cluster: Isoform 2 of Q8N0V3 ; n=2;
Catarrhini|Rep: Isoform 2 of Q8N0V3 - Homo sapiens
(Human)
Length = 242
Score = 45.2 bits (102), Expect = 0.002
Identities = 19/49 (38%), Positives = 29/49 (59%)
Query: 21 RVAMLNKMFMKHITDLMSTGTVSMDIIGRGIEISKVNVTSDFQTVHVYW 69
R+ LN + K +TDL+ T VS ++ +E+SKV++T DF YW
Sbjct: 92 RLRALNGLLYKALTDLLCTPEVSQELYDLNVELSKVSLTPDFSACRAYW 140
>UniRef50_Q7NY12 Cluster: Ribosome-binding factor A; n=5;
Neisseriaceae|Rep: Ribosome-binding factor A -
Chromobacterium violaceum
Length = 138
Score = 44.8 bits (101), Expect = 0.003
Identities = 38/123 (30%), Positives = 56/123 (45%), Gaps = 8/123 (6%)
Query: 16 KRGIRRVAMLNKMFMKHITDLMSTGTVSMDIIGRGIEISKVNVTSDFQTVHVYWICKGTS 75
K+G R + + + + +L G D I I+ V VT D+ VY+ S
Sbjct: 5 KKGFSRSDRVAEQIQRELAELTRKGL--KDPRAGWITITAVEVTRDYSHAKVYYTVMVDS 62
Query: 76 TDEETEATLNSVAGALRHELSVLRIMGQVPYIVFVKDMHEAR---ILDLDNRLLKAD--- 129
T E T+ L+S AG LR+EL M +P + FV D R + L N++ + D
Sbjct: 63 TREATQEALDSSAGYLRNELGRAIKMFSMPQLHFVYDDSVERGMHLTSLINQVAREDAEK 122
Query: 130 FGE 132
FGE
Sbjct: 123 FGE 125
>UniRef50_Q18170 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 227
Score = 41.5 bits (93), Expect = 0.026
Identities = 29/116 (25%), Positives = 57/116 (49%), Gaps = 7/116 (6%)
Query: 20 RRVAMLNKMFMKHITDLMSTGTVSMDIIGR-GIEISKVNVTSDFQTVHVYWICKGTSTDE 78
++V L+++ + I ++++T +++GR ++I++V V F V VYW+C+G D
Sbjct: 84 KKVVQLSRILEERIAEVVATD----EMLGRLQLQITRVRVDRAFTQVSVYWMCRGDG-DS 138
Query: 79 ETEATLNSVAGALRHELSVLRIMGQVPYIVFVKDMHEARILDLDNRLLKADFGENY 134
E L +R + I P + F+ D ++D +AD+G +Y
Sbjct: 139 EIVDFLEESKHQIRRRVEE-SIGITCPEVKFIGDKALLMEQEMDKLFREADYGMDY 193
>UniRef50_Q8GV43 Cluster: Phosphoinositide-specific phospholipase C
8; n=28; Magnoliophyta|Rep: Phosphoinositide-specific
phospholipase C 8 - Arabidopsis thaliana (Mouse-ear
cress)
Length = 544
Score = 38.3 bits (85), Expect = 0.24
Identities = 24/119 (20%), Positives = 55/119 (46%), Gaps = 5/119 (4%)
Query: 148 TLDTKISPDIKAKIRQLEIDEPSQESPIPEMTHTIYGLDHAKIMNRLLTARKKSKDAWSN 207
TL+ ++PD++AK+ ++ Q PE + A +++R++ + K K+
Sbjct: 161 TLEDHLTPDLQAKVAEMATQIFGQMLYYPESDSLLEFPSPASLLHRIIISTKPPKE---Y 217
Query: 208 LESESPVISYRIHESTPIKVDTVTQNKELAEFLLKRQILQNKLAKQLRKTSDDWQLSDD 266
LES +P++ + + +P D + +E+ L+ + + +D + S+D
Sbjct: 218 LESRNPIVKQKDNNVSPSSEDETPRTEEIQ--TLESMLFDQDFESKSDSDQEDEEASED 274
>UniRef50_A4RM25 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 644
Score = 37.5 bits (83), Expect = 0.42
Identities = 29/120 (24%), Positives = 48/120 (40%), Gaps = 4/120 (3%)
Query: 119 LDLDNRLLKADFGENYTPTDPGHLLKTEFTLDTKISPDIKAKIRQLEIDEPSQESPIPEM 178
L +DN + + E+ ++ + TLD+ Q E P+ P+P
Sbjct: 27 LGVDNSSAEVEIIESRPGSNSRRTDAIDLTLDSPEPEPEPVPASQPEAKRPTSPPPVPSS 86
Query: 179 THTIYGLDHAKI-MNRLLTARKKSKDAWSNLESESPVISYRIHES---TPIKVDTVTQNK 234
TH+I+G+D K+ RL K+ E+E P R+ TP TV ++
Sbjct: 87 THSIFGMDRKKMEEERLARLLKRKASDNETHETERPSQKARLEHGVAPTPTVSSTVPSSR 146
>UniRef50_Q6A7M9 Cluster: Ribosome-binding factor A; n=3;
Actinomycetales|Rep: Ribosome-binding factor A -
Propionibacterium acnes
Length = 143
Score = 37.1 bits (82), Expect = 0.55
Identities = 21/79 (26%), Positives = 36/79 (45%), Gaps = 1/79 (1%)
Query: 51 IEISKVNVTSDFQTVHVYWICKGTSTD-EETEATLNSVAGALRHELSVLRIMGQVPYIVF 109
+ I+ V +T D + ++W GT + TEA L S G LR + + P + F
Sbjct: 35 VTITDVRLTGDSRDATLFWTAMGTDKEIAGTEAALESAKGMLRSTVGKRLKLRYAPTLTF 94
Query: 110 VKDMHEARILDLDNRLLKA 128
V+D +++ L +A
Sbjct: 95 VRDATPETAKSIEDALARA 113
>UniRef50_P25588 Cluster: Mediator of replication checkpoint protein
1; n=2; Saccharomyces cerevisiae|Rep: Mediator of
replication checkpoint protein 1 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 1096
Score = 37.1 bits (82), Expect = 0.55
Identities = 30/93 (32%), Positives = 52/93 (55%), Gaps = 16/93 (17%)
Query: 185 LDHAKIMNRLLTARKKSKDAWSNLESESPVISYRIHESTPIKVDTVTQNKELAEFLLKRQ 244
+DH ++N L A +K L+ + VI E+ +K++ + + KE+ E LL+++
Sbjct: 467 VDHNVLLNTLRKASRKQI-----LDHQKEVI-----ETKGLKLEDMAKEKEIVENLLEQE 516
Query: 245 ILQNKLAKQLRK-----TSDDWQL-SDDSGSNS 271
IL+NK +Q K +D+QL + DSGS+S
Sbjct: 517 ILRNKRIRQKEKRREKLEENDFQLNAHDSGSDS 549
>UniRef50_A0NL42 Cluster: Ribosome binding factor A; n=2; Oenococcus
oeni|Rep: Ribosome binding factor A - Oenococcus oeni
ATCC BAA-1163
Length = 139
Score = 36.7 bits (81), Expect = 0.73
Identities = 16/66 (24%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 49 RGIEISKVNVTSDFQTVHVYWICKG--TSTDEETEATLNSVAGALRHELSVLRIMGQVPY 106
+ + I+ +++T DF +VYW S+ E+ +A L + G ++ +L+ ++P
Sbjct: 53 KDVTITGIDMTPDFSIAYVYWTIYSDLASSGEKADAGLQAAKGLIKRQLARKMTTFKIPD 112
Query: 107 IVFVKD 112
++F +D
Sbjct: 113 LIFKRD 118
>UniRef50_Q1K0G2 Cluster: Ribosome-binding factor A; n=1;
Desulfuromonas acetoxidans DSM 684|Rep: Ribosome-binding
factor A - Desulfuromonas acetoxidans DSM 684
Length = 119
Score = 35.9 bits (79), Expect = 1.3
Identities = 25/94 (26%), Positives = 45/94 (47%), Gaps = 3/94 (3%)
Query: 20 RRVAMLNKMFMKHITDLMSTGTVSMDIIGRGIEISKVNVTSDFQTVHVYWICKGTSTD-E 78
+R + + K I+D+M G + + I+ V+++SD + +++ G D E
Sbjct: 4 QRTYRVAEQIHKEISDIMLRGLRDPRV--GFVTITSVDISSDLRHAKIFFTVMGEEADAE 61
Query: 79 ETEATLNSVAGALRHELSVLRIMGQVPYIVFVKD 112
+T+ L+S LR EL + VP +VF D
Sbjct: 62 KTQQGLDSAVPFLRRELGKRMKLRHVPDLVFKYD 95
>UniRef50_A0BM71 Cluster: Chromosome undetermined scaffold_115, whole
genome shotgun sequence; n=1; Paramecium tetraurelia|Rep:
Chromosome undetermined scaffold_115, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 1551
Score = 35.9 bits (79), Expect = 1.3
Identities = 42/179 (23%), Positives = 80/179 (44%), Gaps = 10/179 (5%)
Query: 90 ALRHELSVLRIMGQVPYIVFVKDMHEARILDLDNRLLKADFGENYTPTDPGHLLKTEFTL 149
A R E ++++ GQ+ I + + DL + D L + TL
Sbjct: 1292 ARRSEEQIIQMKGQIDTIKQNLALKQKECEDLKQIKENVEQKNTTLLQDIDSLKSNQLTL 1351
Query: 150 DTKISPDIKAKIRQL--EIDEPSQESPIP-EMTHTIYGLD--HAKIMNRLLTARKKSKDA 204
K S D+ ++++L E ++ Q + I E+ I L+ ++ +L + ++ D
Sbjct: 1352 SVK-SEDLIQEVQRLQNECNQMKQFNGIKNELESKIQALNKQQEELQQQLQSKNRELLDL 1410
Query: 205 WSNL---ESESPVISYRIHESTPIKVDTVTQNKELAEFLLKRQILQNKLAKQLRKTSDD 260
L +S++ +I E +++ VTQNKE E+ K +LQ ++ K L K+ +D
Sbjct: 1411 KQKLNDYDSQNQIIKQLQVEEQKLQLQIVTQNKEKEEWHAKMDLLQRQIEK-LEKSKND 1468
>UniRef50_Q8RA38 Cluster: Ribosome-binding factor A; n=5;
Clostridia|Rep: Ribosome-binding factor A -
Thermoanaerobacter tengcongensis
Length = 122
Score = 35.9 bits (79), Expect = 1.3
Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 4/87 (4%)
Query: 51 IEISKVNVTSDFQTVHVYWICKGTSTDE-ETEATLNSVAGALRHELSVLRIMGQVPYIVF 109
+ I+ + VT D + VY G+ ++ ET L S AG +RHE+ M P I+F
Sbjct: 36 VSITDIEVTKDLRYAKVYVSIYGSEEEKRETFEGLKSAAGYIRHEIGRRIKMRYTPEIIF 95
Query: 110 VKD---MHEARILDLDNRLLKADFGEN 133
D + A+I ++ L K + +N
Sbjct: 96 ELDHSIEYGAKISEILKELNKQEGDDN 122
>UniRef50_UPI000065E7D3 Cluster: Homolog of Homo sapiens "Splice
Isoform A of Cat eye syndrome critical region protein 2;
n=1; Takifugu rubripes|Rep: Homolog of Homo sapiens
"Splice Isoform A of Cat eye syndrome critical region
protein 2 - Takifugu rubripes
Length = 1437
Score = 35.5 bits (78), Expect = 1.7
Identities = 22/82 (26%), Positives = 37/82 (45%), Gaps = 3/82 (3%)
Query: 168 EPSQESPIPEMTHTIYGLDHA-KIMNRLLTARKKSKDAWSNLESESPVISYRIHE--STP 224
+PS +P + Y LD + ++L A K KDAW LE + HE TP
Sbjct: 239 DPSSPAPRTKRNKEFYELDDDYTALYKVLEALKSHKDAWPFLEPVDESYAPNYHEIIKTP 298
Query: 225 IKVDTVTQNKELAEFLLKRQIL 246
+ + T+ + E++ K + +
Sbjct: 299 MDLSTIERKINDGEYITKEEFI 320
>UniRef50_A4FVS5 Cluster: At1g75730; n=3; Arabidopsis thaliana|Rep:
At1g75730 - Arabidopsis thaliana (Mouse-ear cress)
Length = 589
Score = 35.1 bits (77), Expect = 2.2
Identities = 31/116 (26%), Positives = 59/116 (50%), Gaps = 9/116 (7%)
Query: 143 LKTEFTLDTKISPDIKAKIRQLEIDEPSQESPIPEMTHTIYGLDHAKIMNRLLTA-RKKS 201
LK E + DT SPD++ E+ + + P + T G+DHA + +L +A +K++
Sbjct: 46 LKQEMSYDTLPSPDLEN-----EVSKKKSKLPKKNLKDT-NGVDHASVPRKLRSAMKKRN 99
Query: 202 KDAWSNLESESPVISYRIHESTPIKVDTVTQNKELAEFLLKRQILQNKLAKQLRKT 257
++ S L S S ++ R T V +Q E A+ ++ ++ +K K++ +T
Sbjct: 100 LESVSKLSSVSKRLN-RFKTGTESSVKKESQEME-AKAIVTESMMISKDEKEVAET 153
>UniRef50_A3VQI0 Cluster: Ribosome-binding factor A; n=1;
Parvularcula bermudensis HTCC2503|Rep: Ribosome-binding
factor A - Parvularcula bermudensis HTCC2503
Length = 106
Score = 34.7 bits (76), Expect = 3.0
Identities = 18/62 (29%), Positives = 32/62 (51%)
Query: 51 IEISKVNVTSDFQTVHVYWICKGTSTDEETEATLNSVAGALRHELSVLRIMGQVPYIVFV 110
+ I++V V+ D ++ V+ G +E A LN+++GA+R L M P + F+
Sbjct: 25 VTITEVRVSPDLKSATVFCSALGKDVFDEEVAQLNAISGAIRQVLGRKITMKYTPSLKFL 84
Query: 111 KD 112
D
Sbjct: 85 PD 86
>UniRef50_A7R536 Cluster: Chromosome undetermined scaffold_848,
whole genome shotgun sequence; n=5; Vitis vinifera|Rep:
Chromosome undetermined scaffold_848, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 531
Score = 34.7 bits (76), Expect = 3.0
Identities = 32/120 (26%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
Query: 141 HLLKTEFTLDTKISPDIKAKIRQLEIDEPSQESPIPEMTHTIYGLD-HAKIMNRLLTARK 199
++L + ++ + + ++ ++ QL E Q+ I + TI L K + L
Sbjct: 394 NMLADKHRIEKEQNSQLRNQVAQLLQLEQDQKMQIQQRDSTIQTLQSEIKAIELKLMEAI 453
Query: 200 KSKDAWSNLESESPVISYRIHESTPIKVDTVTQNKELAEFLLKRQILQNKLAKQLRKTSD 259
SK+A S +ES I +ST +D+ K+L E LLKR L +L ++ K D
Sbjct: 454 NSKEAKSVFGAESGPEVLSIPKSTGDVMDSSAVTKKLEEELLKRDALIERLHEENEKLFD 513
>UniRef50_A0CGV3 Cluster: Chromosome undetermined scaffold_18, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_18,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 242
Score = 34.7 bits (76), Expect = 3.0
Identities = 28/108 (25%), Positives = 53/108 (49%), Gaps = 6/108 (5%)
Query: 160 KIRQLEIDEPSQESPIPEMTHTIYGLDHAKIMNRLLTARKKSKDAWSNLESESPVISYRI 219
KIRQLE+DE + + I E+ I L H+ +++ +K K NL E + Y+
Sbjct: 98 KIRQLEVDEKNYQQQIKELKEQIQNLGHSIPESQI---SEKEKAEIKNLHLE--IKKYQE 152
Query: 220 HESTPIKVDTVTQNKELAEFLLKRQILQNKLAKQLRKTSDDWQLSDDS 267
E+ ++ K+ E + + Q+++ Q+++ Q+SDD+
Sbjct: 153 KENQN-RIQKERLEKKYLEQVTELSNNQDEMYLQIQELRSKAQMSDDN 199
>UniRef50_UPI0000E48A19 Cluster: PREDICTED: similar to XL-INCENP
protein; n=1; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to XL-INCENP protein -
Strongylocentrotus purpuratus
Length = 1061
Score = 33.9 bits (74), Expect = 5.2
Identities = 23/90 (25%), Positives = 38/90 (42%)
Query: 165 EIDEPSQESPIPEMTHTIYGLDHAKIMNRLLTARKKSKDAWSNLESESPVISYRIHESTP 224
E D+ ++P PE + H K +L A KK K V++ I +TP
Sbjct: 690 ESDDIIDKTPSPECPPSKVIRPHPKSFLNVLNANKKKKLVCPGTPQSGSVVTSFIQRNTP 749
Query: 225 IKVDTVTQNKELAEFLLKRQILQNKLAKQL 254
K Q +E LL++Q + + K++
Sbjct: 750 QKRTFKEQQQERKALLLEKQKKEENIKKKM 779
>UniRef50_Q03WH5 Cluster: Ribosome-binding factor A; n=1;
Leuconostoc mesenteroides subsp. mesenteroides ATCC
8293|Rep: Ribosome-binding factor A - Leuconostoc
mesenteroides subsp. mesenteroides (strain ATCC 8293
/NCDO 523)
Length = 117
Score = 33.9 bits (74), Expect = 5.2
Identities = 22/95 (23%), Positives = 48/95 (50%), Gaps = 4/95 (4%)
Query: 20 RRVAMLNKMFMKHITDLMSTGTVSMDIIGRGIEISKVNVTSDFQTVHVYW-ICKGTSTD- 77
+R L + + +TDL+ + + + ++ V ++ D Q +Y+ I ++D
Sbjct: 5 QRAGRLAQEVQRDVTDLLLKRINDPRV--KEVTVTSVELSGDLQIATIYYSILSDLASDA 62
Query: 78 EETEATLNSVAGALRHELSVLRIMGQVPYIVFVKD 112
++T+A L + +G +R EL + + P + FV+D
Sbjct: 63 KKTQAGLEAASGLIRKELGSRLTVYKTPELKFVRD 97
>UniRef50_A5Z671 Cluster: Putative uncharacterized protein; n=1;
Eubacterium ventriosum ATCC 27560|Rep: Putative
uncharacterized protein - Eubacterium ventriosum ATCC
27560
Length = 519
Score = 33.9 bits (74), Expect = 5.2
Identities = 20/95 (21%), Positives = 49/95 (51%), Gaps = 4/95 (4%)
Query: 42 VSMDIIGRGIEISKV-NVTSDFQTVHVYWICKGTSTDEETEATLNSVAGALRHELSVLRI 100
+++ ++ G+++S + + T+D Q++ VY + + ++T+A LN + ++++V+
Sbjct: 12 LTLAMLTTGVQVSVLADQTTDLQSMKVYAV---NAAGKKTKAELNFSSTTYTYDITVMSD 68
Query: 101 MGQVPYIVFVKDMHEARILDLDNRLLKADFGENYT 135
+ + ++ D K DFG+NYT
Sbjct: 69 TESIEIVASPATSGSTWAIEKDGINTKMDFGKNYT 103
>UniRef50_A3IT45 Cluster: Type IIS restriction-modification protein;
n=3; Cyanobacteria|Rep: Type IIS
restriction-modification protein - Cyanothece sp. CCY
0110
Length = 282
Score = 33.9 bits (74), Expect = 5.2
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 174 PIPEMTHTIYGLDHAKIMNRLLTARKKSKDA-WSNLESESPVISYRIHESTPIKVDTVTQ 232
PIP T+ + +I+N+++ + + DA SNLE E I Y+++E TP ++ + +
Sbjct: 218 PIPTATNK-QDTEITEIVNKIIKIKNNNPDADVSNLEKEIDEIVYKLYELTPEEI-AIVE 275
Query: 233 NKE 235
KE
Sbjct: 276 GKE 278
>UniRef50_A0YNW9 Cluster: Sensor protein; n=1; Lyngbya sp. PCC
8106|Rep: Sensor protein - Lyngbya sp. PCC 8106
Length = 608
Score = 33.9 bits (74), Expect = 5.2
Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 5/70 (7%)
Query: 188 AKIMNRLLTARKKSKDAWSNLESESPVISYRIHESTPIKVDTVTQNKELAEFLLKRQILQ 247
+K+ + T +K K L ISY+I E+ K+D V++ + AEF++ IL
Sbjct: 534 SKLFDPFFTTKKIGKGTGIGL-----AISYKIIENHQGKIDVVSEYGQGAEFIITLPILS 588
Query: 248 NKLAKQLRKT 257
K+++ RK+
Sbjct: 589 KKMSQHSRKS 598
>UniRef50_A4YHB2 Cluster: SpoVT/AbrB domain protein; n=2;
Sulfolobaceae|Rep: SpoVT/AbrB domain protein -
Metallosphaera sedula DSM 5348
Length = 326
Score = 33.9 bits (74), Expect = 5.2
Identities = 27/98 (27%), Positives = 53/98 (54%), Gaps = 10/98 (10%)
Query: 162 RQLEIDEPSQESPIPEMTHTIYGLDHAKIMNRLLTARK--KSKDAWSNLESESPVISYRI 219
R ++ID S + PIP + +Y L + +I +L +RK + KD ++ ++ +
Sbjct: 67 RSIKIDVDSLKQPIPSIIPCLYTLGYDEI---ILESRKSIQQKDVEDLIQVTKQIVGVEV 123
Query: 220 HES--TPIKVDTVTQNKELA-EFLLKRQILQNKLAKQL 254
E+ T IKV+ + +++ E LL+R + N +AK++
Sbjct: 124 TETSETRIKVECLLDTEKVGIESLLRRML--NTVAKRV 159
>UniRef50_P65971 Cluster: Ribosome-binding factor A; n=17;
Lactobacillales|Rep: Ribosome-binding factor A -
Streptococcus pyogenes serotype M1
Length = 116
Score = 33.9 bits (74), Expect = 5.2
Identities = 17/66 (25%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Query: 49 RGIEISKVNVTSDFQTVHVYWICKG--TSTDEETEATLNSVAGALRHELSVLRIMGQVPY 106
+G+ I++V + D VY+ S +++ + L G ++ EL M ++P
Sbjct: 31 QGVTITEVQMQGDLSLAKVYYTIMSDLASDNQKAQTGLEKATGTIKRELGKQLTMYKIPD 90
Query: 107 IVFVKD 112
+VF KD
Sbjct: 91 LVFEKD 96
>UniRef50_Q12H64 Cluster: ABC transporter related; n=2;
Proteobacteria|Rep: ABC transporter related -
Polaromonas sp. (strain JS666 / ATCC BAA-500)
Length = 383
Score = 33.5 bits (73), Expect = 6.8
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 77 DEETEATLNSVAGALRHELSVLRIMGQVPYIVFVKDMHEARILDLDNRLLKADFGENYTP 136
DE A AL HEL+VLR +P ++ D++EAR L +R++ D GE+
Sbjct: 158 DEPFSAVDAPTRQALYHELAVLRQSVAIPMVLVTHDLNEAR--RLADRVVILDAGESLQV 215
Query: 137 TDPGHL 142
P +
Sbjct: 216 GPPARV 221
>UniRef50_Q54JL6 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 512
Score = 33.5 bits (73), Expect = 6.8
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 198 RKKSKDAWSNLESESPVISYRIHESTPIKVDTVTQNKELAEFLLKRQILQ-NKLAKQLRK 256
+ K K +N + SP + I+E T I+++ + + L IL NK KQ K
Sbjct: 343 KSKFKLKLNNTPNSSPRSTVTINEPTDIQMEPIQRTDSFENDLRALDILHFNKNNKQYTK 402
Query: 257 TSDDWQLSDDSGSNS 271
T DD + D+ G+N+
Sbjct: 403 TDDDDNI-DEDGANT 416
>UniRef50_Q22KL9 Cluster: Leucine Rich Repeat family protein; n=1;
Tetrahymena thermophila SB210|Rep: Leucine Rich Repeat
family protein - Tetrahymena thermophila SB210
Length = 911
Score = 33.5 bits (73), Expect = 6.8
Identities = 26/103 (25%), Positives = 45/103 (43%), Gaps = 3/103 (2%)
Query: 152 KISPDIKAKI-RQLEIDEPSQESPIPEMTHTIYGLDHAKIMNRLLTARKKSKDAWSNLES 210
K+ + KA+ R+ +I+E + I + Y +I L KK K SN+E
Sbjct: 716 KLYDEKKAQYERESKIEEQKTQEVIQNKDNVTYERKQLEIWYNEL--EKKQKIEESNIEE 773
Query: 211 ESPVISYRIHESTPIKVDTVTQNKELAEFLLKRQILQNKLAKQ 253
+ ++ +I S + + Q KE +FL K + + KQ
Sbjct: 774 DIKTMTQKIGNSNSETIKMMQQKKERRDFLSKMTVQNEEAVKQ 816
>UniRef50_Q6BZT5 Cluster: Yarrowia lipolytica chromosome F of strain
CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome F of
strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 450
Score = 33.5 bits (73), Expect = 6.8
Identities = 20/48 (41%), Positives = 25/48 (52%)
Query: 58 VTSDFQTVHVYWICKGTSTDEETEATLNSVAGALRHELSVLRIMGQVP 105
VT DF T+HVY I T D++ L VA A +VL +M VP
Sbjct: 351 VTVDFSTLHVYKIKPSTQFDDDKADMLERVAEANILPNTVLTVMHAVP 398
>UniRef50_A2F208 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 642
Score = 33.1 bits (72), Expect = 9.0
Identities = 23/93 (24%), Positives = 48/93 (51%), Gaps = 2/93 (2%)
Query: 150 DTKISPDIKAKIRQLEIDEPSQESPIPEMTHTIYGLDHAKIMNRLLTARKKSKDAWSNLE 209
D + DI+AK++ L+ D S +S + E+ + +K+ + L + K +++ +NL+
Sbjct: 149 DRFVRMDIEAKLKPLQEDIKSSKSKVNELLLSTQ-TSFSKVDSSLESISAKIEESQNNLK 207
Query: 210 SESPVISYRIHESTPIKVDTVTQNKELAEFLLK 242
S+ I+ + P K+ +T +L LL+
Sbjct: 208 SQQAKINTQFDSYVP-KIGALTHKVQLLRDLLQ 239
>UniRef50_Q6BWA8 Cluster: Similar to sp|P25301 Saccharomyces
cerevisiae YDR004w RAD57 DNA repair protein; n=1;
Debaryomyces hansenii|Rep: Similar to sp|P25301
Saccharomyces cerevisiae YDR004w RAD57 DNA repair
protein - Debaryomyces hansenii (Yeast) (Torulaspora
hansenii)
Length = 569
Score = 33.1 bits (72), Expect = 9.0
Identities = 31/104 (29%), Positives = 50/104 (48%), Gaps = 9/104 (8%)
Query: 145 TEFT-LDTKISPDIKAKIRQLEIDEPSQESPIPE-MTHTIYGLDHAKIMNRLLTARKKSK 202
T FT L K+S + K K+R + ID S + E +T+T+Y DH K LT K+
Sbjct: 198 TLFTQLPVKLSQE-KGKVRAIIIDSISHHLRLEEAITNTMYITDHIKAQEEALTDSKEYA 256
Query: 203 DAWSNLESESPVISYRIHESTPIKVDTVTQNKELAEFLLKRQIL 246
+ + L+ + +STP + + + + L LL R +L
Sbjct: 257 EIKTKLDQQFKA----FFKSTPKYQNRIAKTQYL--MLLHRHLL 294
>UniRef50_A7ELW6 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 884
Score = 33.1 bits (72), Expect = 9.0
Identities = 30/117 (25%), Positives = 47/117 (40%), Gaps = 2/117 (1%)
Query: 129 DFGENYTPTDPGHLLKTEFTLDTKISPDIKAKIRQLEIDEPSQESPIPEMTHTIYGLDHA 188
D EN PGHL T + T SP I K +I ES IP+ GL A
Sbjct: 523 DLDENGGYFSPGHLTTTLYGPSTPSSPTIN-KAFTWKIKPGEYESVIPKAKDVATGLAQA 581
Query: 189 KIMNR-LLTARKKSKDAWSNLESESPVISYRIHESTPIKVDTVTQNKELAEFLLKRQ 244
++ R + SK + +L + + ++T + Q +E+ L+ R+
Sbjct: 582 ELRERGSESPTDNSKTSLPSLAPNPSALQWEERKATEAEEQWQAQAQEIRRELVARE 638
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.315 0.130 0.367
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 288,062,087
Number of Sequences: 1657284
Number of extensions: 11142797
Number of successful extensions: 31219
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 31174
Number of HSP's gapped (non-prelim): 51
length of query: 301
length of database: 575,637,011
effective HSP length: 100
effective length of query: 201
effective length of database: 409,908,611
effective search space: 82391630811
effective search space used: 82391630811
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 72 (33.1 bits)
- SilkBase 1999-2023 -