Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001872-TA|BGIBMGA001872-PA|IPR000238|Ribosome-binding
factor A
(301 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF134817-1|AAD40233.1| 105|Apis mellifera FABP-like protein pro... 27 0.20
AB083011-1|BAC54132.1| 135|Apis mellifera fatty acid binding pr... 27 0.20
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 24 1.9
AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellif... 23 3.3
AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly pro... 23 4.4
AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine beta-sy... 23 4.4
EF373554-1|ABQ28728.1| 167|Apis mellifera phospholipase A2 prot... 22 5.8
AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled rec... 22 5.8
AF438408-1|AAL30844.1| 167|Apis mellifera phospholipase A2 prot... 22 5.8
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 22 7.6
>AF134817-1|AAD40233.1| 105|Apis mellifera FABP-like protein
protein.
Length = 105
Score = 27.1 bits (57), Expect = 0.20
Identities = 12/38 (31%), Positives = 20/38 (52%)
Query: 234 KELAEFLLKRQILQNKLAKQLRKTSDDWQLSDDSGSNS 271
K L + L +LQ + + +L K D+W + SG N+
Sbjct: 19 KVLGDQNLVNTVLQPRPSFELSKNGDEWTFTSSSGDNT 56
>AB083011-1|BAC54132.1| 135|Apis mellifera fatty acid binding
protein protein.
Length = 135
Score = 27.1 bits (57), Expect = 0.20
Identities = 12/38 (31%), Positives = 20/38 (52%)
Query: 234 KELAEFLLKRQILQNKLAKQLRKTSDDWQLSDDSGSNS 271
K L + L +LQ + + +L K D+W + SG N+
Sbjct: 21 KVLGDQNLVNTVLQPRPSFELSKNGDEWTFTSSSGDNT 58
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 23.8 bits (49), Expect = 1.9
Identities = 14/52 (26%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 36 LMSTGTVSMDIIGRGIEISKVNVTSDFQTVHVYWICKGTSTDEETEATLNSV 87
+++ GTV+ DI+ R I + N+ +++ + KGT T +T + S+
Sbjct: 23 MLTRGTVN-DIVSRNITMVLENLLMNYENNQLPTHGKGTPTVVKTNILIRSM 73
>AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellifera
ORF for hypotheticalprotein. ).
Length = 998
Score = 23.0 bits (47), Expect = 3.3
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 184 GLDHAKIMNRLLTARKKSKDAWSN 207
G++H + ++ ARK D W N
Sbjct: 897 GINHGPVTAGVIGARKPHYDIWGN 920
>AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly
protein MRJP6 protein.
Length = 437
Score = 22.6 bits (46), Expect = 4.4
Identities = 20/84 (23%), Positives = 39/84 (46%), Gaps = 5/84 (5%)
Query: 168 EPSQESPIPEMTHTIYGLDHAKIMNRLLTARKKSKDA--WSNLESESPVISYRIHESTPI 225
EP +S E G+ I N +A+ SK+ + L + S + + H+
Sbjct: 282 EPFMKSQYEENNIEYEGIQD--IFNTQSSAKVMSKNGVLFFGLVNNSAIGCWNEHQPLQR 339
Query: 226 K-VDTVTQNKELAEFLLKRQILQN 248
+ +D V QN++ + ++ +I+QN
Sbjct: 340 QNMDMVAQNEKTLQMIISVKIIQN 363
>AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine
beta-synthase protein.
Length = 504
Score = 22.6 bits (46), Expect = 4.4
Identities = 6/28 (21%), Positives = 17/28 (60%)
Query: 97 VLRIMGQVPYIVFVKDMHEARILDLDNR 124
+ R++ + PY++ + D H+ + + N+
Sbjct: 458 ISRVLEKEPYVIILDDEHDDAFIGIVNQ 485
>EF373554-1|ABQ28728.1| 167|Apis mellifera phospholipase A2
protein.
Length = 167
Score = 22.2 bits (45), Expect = 5.8
Identities = 10/27 (37%), Positives = 13/27 (48%)
Query: 244 QILQNKLAKQLRKTSDDWQLSDDSGSN 270
Q++ L L TS WQ+ D G N
Sbjct: 2 QVVLGSLFLLLLSTSHGWQIRDRIGDN 28
>AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled
receptor protein.
Length = 399
Score = 22.2 bits (45), Expect = 5.8
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 173 SPIPEMTHTIYGLDHAKIMNRLLTAR 198
S + + +TI+ LD+ + RLL R
Sbjct: 374 SALNPLIYTIFNLDYRRAFRRLLRIR 399
>AF438408-1|AAL30844.1| 167|Apis mellifera phospholipase A2
protein.
Length = 167
Score = 22.2 bits (45), Expect = 5.8
Identities = 10/27 (37%), Positives = 13/27 (48%)
Query: 244 QILQNKLAKQLRKTSDDWQLSDDSGSN 270
Q++ L L TS WQ+ D G N
Sbjct: 2 QVVLGSLFLLLLSTSHGWQIRDRIGDN 28
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 21.8 bits (44), Expect = 7.6
Identities = 15/82 (18%), Positives = 36/82 (43%)
Query: 189 KIMNRLLTARKKSKDAWSNLESESPVISYRIHESTPIKVDTVTQNKELAEFLLKRQILQN 248
++M RL++ K+ + + +S+ P H+ST + Q ++ + ++ Q
Sbjct: 786 EVMRRLMSEDKRLSKSVNGDQSQPPHQQLHHHQSTHPQAQAQAQPQQQQQQQQQQPQQQQ 845
Query: 249 KLAKQLRKTSDDWQLSDDSGSN 270
+ +Q ++ +DD N
Sbjct: 846 QQQQQQQQQQRGPMTNDDFNPN 867
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.315 0.130 0.367
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,108
Number of Sequences: 429
Number of extensions: 2542
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 4
Number of HSP's gapped (non-prelim): 10
length of query: 301
length of database: 140,377
effective HSP length: 57
effective length of query: 244
effective length of database: 115,924
effective search space: 28285456
effective search space used: 28285456
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 44 (21.8 bits)
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