GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001871-TA|BGIBMGA001871-PA|undefined
         (234 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-3173|AAF46707.2|  289|Drosophila melanogaster CG30390-P...   147   1e-35
BT014636-1|AAT27260.1|  121|Drosophila melanogaster RH55624p pro...    79   4e-15

>AE013599-3173|AAF46707.2|  289|Drosophila melanogaster CG30390-PA
           protein.
          Length = 289

 Score =  147 bits (356), Expect = 1e-35
 Identities = 81/183 (44%), Positives = 109/183 (59%), Gaps = 15/183 (8%)

Query: 1   MPLTADVAAQQVQERLRSLHRLIYDIEAERSRNEQCIDAILRAEXXXXXXXXXXXXXXXX 60
           MPLTA+ AAQQ+Q+RL+ + + I++++ ER R E  I +++R+                 
Sbjct: 1   MPLTAESAAQQIQDRLKDIQQNIHNVDEERRRAENSIASLVRS---------------LH 45

Query: 61  XXXXXXXXXXXXGLTXXXXXXXXXXXXXXXIYEIRAIKNERRIQARHAGNKETIGCGALM 120
                        LT               I+EIR+I+NERRIQAR+AGNKE I  GALM
Sbjct: 46  ATNQKVKPLLKASLTEAAQEEATIRAALAKIHEIRSIRNERRIQARNAGNKEAIRRGALM 105

Query: 121 KLLLSAAQTLPLHVGRAGERAPPLCGAVPADAGHVARPGDAVAALVRVSDNEDNWILAET 180
           K++  +AQTLPL VG+ GERAP LCGA+PA+  +VA+ GD VAAL +  D E+NWILAE 
Sbjct: 106 KMVQLSAQTLPLFVGKLGERAPALCGAIPAEGNYVAKVGDNVAALAKGIDEEENWILAEV 165

Query: 181 TCF 183
             F
Sbjct: 166 VQF 168



 Score = 77.8 bits (183), Expect = 1e-14
 Identities = 42/88 (47%), Positives = 52/88 (59%), Gaps = 10/88 (11%)

Query: 143 PLCGAVPADAGHVARPGDAVAALVRVSDNEDNWILAETTCFYRAVVNRLPASAADPYEVL 202
           PL  A P   GH   P D V             +  +TTCFY+A+V+RLP +A + YEVL
Sbjct: 199 PLMRANPETDGHALFPKDTVVMA----------LYPQTTCFYKAIVHRLPQTATEDYEVL 248

Query: 203 FEDSSYADGYSPPERVAQRYVIAIKEGK 230
           FEDSSY +GY+ P  VAQRYVIA +  K
Sbjct: 249 FEDSSYTNGYAEPLPVAQRYVIAYRPTK 276


>BT014636-1|AAT27260.1|  121|Drosophila melanogaster RH55624p
           protein.
          Length = 121

 Score = 79.4 bits (187), Expect = 4e-15
 Identities = 49/130 (37%), Positives = 70/130 (53%), Gaps = 15/130 (11%)

Query: 1   MPLTADVAAQQVQERLRSLHRLIYDIEAERSRNEQCIDAILRAEXXXXXXXXXXXXXXXX 60
           MPLTA+ AAQQ+Q+RL+ + + I++++ ER R E  I +++R+                 
Sbjct: 1   MPLTAESAAQQIQDRLKDIQQNIHNVDEERRRAENSIASLVRS---------------LH 45

Query: 61  XXXXXXXXXXXXGLTXXXXXXXXXXXXXXXIYEIRAIKNERRIQARHAGNKETIGCGALM 120
                        LT               I+EIR+I+NERRIQAR+AGNKE I  GALM
Sbjct: 46  ATNQKVKPLLKASLTEAAQEEATIRAALAKIHEIRSIRNERRIQARNAGNKEAIRRGALM 105

Query: 121 KLLLSAAQTL 130
           K++  +AQTL
Sbjct: 106 KMVQLSAQTL 115


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.319    0.134    0.388 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,746,453
Number of Sequences: 52641
Number of extensions: 295357
Number of successful extensions: 689
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 684
Number of HSP's gapped (non-prelim): 5
length of query: 234
length of database: 24,830,863
effective HSP length: 83
effective length of query: 151
effective length of database: 20,461,660
effective search space: 3089710660
effective search space used: 3089710660
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 60 (28.3 bits)