Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001870-TA|BGIBMGA001870-PA|IPR000504|RNA-binding region
RNP-1 (RNA recognition motif)
(619 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_O61646 Cluster: Splicing factor SRp54; n=8; Endopterygo... 332 2e-89
UniRef50_A7RX62 Cluster: Predicted protein; n=1; Nematostella ve... 158 5e-37
UniRef50_O01159 Cluster: Probable splicing factor, arginine/seri... 142 2e-32
UniRef50_Q4S294 Cluster: Chromosome undetermined SCAF14764, whol... 134 5e-30
UniRef50_Q05519 Cluster: Splicing factor arginine/serine-rich 11... 130 1e-28
UniRef50_UPI00006602BB Cluster: Splicing factor, arginine/serine... 124 7e-27
UniRef50_Q5BXR0 Cluster: SJCHGC01048 protein; n=2; Schistosoma j... 124 7e-27
UniRef50_Q8BYD3 Cluster: 0 day neonate thymus cDNA, RIKEN full-l... 113 2e-23
UniRef50_Q8WXA9 Cluster: Splicing factor, arginine/serine-rich 1... 106 2e-21
UniRef50_UPI000069EBBF Cluster: Splicing factor, arginine/serine... 103 2e-20
UniRef50_UPI0000DBF390 Cluster: splicing factor, arginine/serine... 96 2e-18
UniRef50_Q5XJE4 Cluster: Sfrs11 protein; n=2; Mus musculus|Rep: ... 62 4e-08
UniRef50_Q2V4J4 Cluster: Uncharacterized protein At1g32790.2; n=... 50 1e-04
UniRef50_A2ZQJ5 Cluster: Putative uncharacterized protein; n=2; ... 49 4e-04
UniRef50_Q9FGE6 Cluster: RNA-binding protein-like; n=1; Arabidop... 46 0.002
UniRef50_Q4MZ00 Cluster: Splicing factor, putative; n=2; Theiler... 46 0.004
UniRef50_UPI000049976A Cluster: hypothetical protein 110.t00007;... 44 0.009
UniRef50_Q54QQ7 Cluster: Putative RNA splicing factor; n=1; Dict... 43 0.021
UniRef50_Q9LPI3 Cluster: T3F20.1 protein; n=14; Magnoliophyta|Re... 43 0.028
UniRef50_A5AY54 Cluster: Putative uncharacterized protein; n=1; ... 42 0.037
UniRef50_A7TRB8 Cluster: Putative uncharacterized protein; n=1; ... 41 0.085
UniRef50_A3BP23 Cluster: Putative uncharacterized protein; n=1; ... 41 0.11
UniRef50_Q4T2I8 Cluster: Chromosome undetermined SCAF10260, whol... 40 0.15
UniRef50_Q1JTD1 Cluster: Possible RNA-binding protein; n=1; Toxo... 40 0.15
UniRef50_Q9LIR7 Cluster: Genomic DNA, chromosome 3, BAC clone:F1... 40 0.20
UniRef50_Q7PVV0 Cluster: ENSANGP00000016779; n=2; Culicidae|Rep:... 40 0.20
UniRef50_P40561 Cluster: RNA-binding protein SGN1; n=2; Saccharo... 40 0.20
UniRef50_Q4FYT7 Cluster: Putative uncharacterized protein; n=3; ... 39 0.45
UniRef50_A7AMD5 Cluster: Splicing factor, CC1-like family protei... 39 0.45
UniRef50_Q3ECG3 Cluster: Uncharacterized protein At1g67950.3; n=... 38 0.60
UniRef50_Q16N17 Cluster: Putative uncharacterized protein; n=1; ... 38 0.60
UniRef50_Q6CQW2 Cluster: Similarities with sp|Q8J1F4 Ashbya goss... 38 0.60
UniRef50_Q388M7 Cluster: RNA-binding protein, putative; n=1; Try... 38 0.79
UniRef50_Q2HS59 Cluster: RNA-binding region RNP-1; n=2; Medicago... 38 1.1
UniRef50_Q4E1W4 Cluster: RNA-binding protein, putative; n=2; Try... 38 1.1
UniRef50_Q8J1F4 Cluster: Yib1; n=1; Eremothecium gossypii|Rep: Y... 38 1.1
UniRef50_UPI0001554F99 Cluster: PREDICTED: similar to RNA-bindin... 37 1.4
UniRef50_Q5A9A2 Cluster: Putative uncharacterized protein PRP24;... 37 1.4
UniRef50_Q7F2F5 Cluster: P0402A09.11 protein; n=3; Oryza sativa|... 37 1.8
UniRef50_Q4QE20 Cluster: RNA-binding protein, putative; n=2; Lei... 37 1.8
UniRef50_A0BHN3 Cluster: Chromosome undetermined scaffold_108, w... 36 2.4
UniRef50_Q5KP11 Cluster: Single-stranded DNA binding protein, pu... 36 2.4
UniRef50_A6RGV4 Cluster: Putative uncharacterized protein; n=1; ... 36 2.4
UniRef50_Q6CAY3 Cluster: Yarrowia lipolytica chromosome C of str... 36 3.2
UniRef50_Q5KIJ4 Cluster: Putative uncharacterized protein; n=2; ... 36 3.2
UniRef50_O13845 Cluster: RNA-binding protein rsd1; n=1; Schizosa... 36 3.2
UniRef50_Q9VJG2 Cluster: CG12288-PA; n=2; Drosophila melanogaste... 36 4.2
UniRef50_Q23QD3 Cluster: Polyadenylate-binding protein 2; n=1; T... 36 4.2
UniRef50_A4S1N4 Cluster: Predicted protein; n=2; Ostreococcus|Re... 35 5.6
UniRef50_Q6A1B2 Cluster: Hrp59 protein; n=2; Endopterygota|Rep: ... 35 7.4
UniRef50_A4V6M0 Cluster: Rnpc2 protein; n=1; Dugesia japonica|Re... 35 7.4
UniRef50_O94290 Cluster: RNA-binding protein Cwf29; n=1; Schizos... 35 7.4
UniRef50_Q9V535 Cluster: RNA-binding protein 8A; n=11; Bilateria... 35 7.4
UniRef50_Q9MAD0 Cluster: T4P13.10 protein; n=3; rosids|Rep: T4P1... 34 9.8
UniRef50_Q014L5 Cluster: Cyclophilin-type peptidyl-prolyl cis-tr... 34 9.8
UniRef50_Q4UDL3 Cluster: Rna binding protein, putative; n=2; The... 34 9.8
UniRef50_Q8SWN2 Cluster: Putative uncharacterized protein ECU01_... 34 9.8
>UniRef50_O61646 Cluster: Splicing factor SRp54; n=8;
Endopterygota|Rep: Splicing factor SRp54 - Drosophila
melanogaster (Fruit fly)
Length = 513
Score = 332 bits (815), Expect = 2e-89
Identities = 173/288 (60%), Positives = 209/288 (72%), Gaps = 6/288 (2%)
Query: 1 MVSGST-RVIQVTNIAPQATKDQMQTLFGYLGKIDDIRLYPTIRDVSCPVQSRICYVKYY 59
M G+T RVIQVTNIAPQATKDQMQTLFG +GKI++IRLYPTIRDVSCPVQSRICYVKY
Sbjct: 1 MAGGNTPRVIQVTNIAPQATKDQMQTLFGNIGKIEEIRLYPTIRDVSCPVQSRICYVKYT 60
Query: 60 DSANVNVAQHMTNTVFIDRALIVIPVQSGEIPDEHKALEMSSNGTLVPGLSSVEPRLPMH 119
D+ +V VAQH+TNTVFIDRALIVIPV + IP+E++ALEM NGT+VPGL + +LP
Sbjct: 61 DTTSVPVAQHLTNTVFIDRALIVIPVLA--IPEEYRALEMLKNGTIVPGLQKPDSKLPPE 118
Query: 120 VINTLDGIPPNQVIQTHDANLTAAGXXXXXXXXXXXDSRKIEEIRRTVLVADT-GSLTSQ 178
VIN ++G P QVI+T+D L D+RKIEEIRRT++V D
Sbjct: 119 VINRIEGQLPQQVIKTYDPKLVEFNLPEYPALPSFYDARKIEEIRRTIIVCDVKNEWRLD 178
Query: 179 QLIDHFCQAGEVKYMRFCSRDVDTLKYALIEMTEQEAVIKALHLNGSTLDGQTIQVYHAT 238
L++ F +AGEVKY R+ +D T Y +IE EQ ++I AL + G G + VYH+T
Sbjct: 179 DLMECFQRAGEVKYARWAEKDNKT--YCMIEFCEQTSIIHALRMQGQEFKGGHLSVYHST 236
Query: 239 QSICKPQTKSNEAAQREIEEAMCRVKEAQNFISAAIDPVIGLLSKDKR 286
SI KP+ KSNEAAQ EIEEAM VKEAQ+ ISAAIDPVIG+L+KDKR
Sbjct: 237 YSITKPEAKSNEAAQAEIEEAMTIVKEAQSMISAAIDPVIGMLAKDKR 284
>UniRef50_A7RX62 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 686
Score = 158 bits (383), Expect = 5e-37
Identities = 82/248 (33%), Positives = 147/248 (59%), Gaps = 11/248 (4%)
Query: 5 STRVIQVTNIAPQATKDQMQTLFGYLGKIDDIRLYPTIRDVSCPVQSRICYVKYYDSANV 64
+T++IQV+N+A AT +Q++ LF ++G+++D++L+P ++ VQS++C+VK+ D ++V
Sbjct: 9 NTKLIQVSNVAHNATLEQLKVLFSFIGEVEDLKLFPESPAIT--VQSKVCFVKFVDPSSV 66
Query: 65 NVAQHMTNTVFIDRALIVIPVQSGEIPDEHKALEM-SSNGTLVPGLSSVEPRLPMHVINT 123
+A H+TNTVFID++LIV+PV + +E KAL++ +++ L G+ LP +
Sbjct: 67 PIALHLTNTVFIDKSLIVVPVSDEPVSEEEKALQLVAASSALALGMGDGGGILPTPAL-- 124
Query: 124 LDGIPPNQVIQTHDANLTAAGXXXXXXXXXXXDSRKIEEIRRTVLVADTG-SLTSQQLID 182
IP Q++ + + D+ K+EEIRRTV V + +T++ L+
Sbjct: 125 ---IP--QLMSSSGNTIAVPSSVPPPPPLTNVDANKVEEIRRTVFVNNLDPEITAEMLLS 179
Query: 183 HFCQAGEVKYMRFCSRDVDTLKYALIEMTEQEAVIKALHLNGSTLDGQTIQVYHATQSIC 242
F G++KY+R D +YA IE E +A++ AL +G+ G+ I+V H+ ++
Sbjct: 180 FFSSCGDIKYIRMGGDDGKPTRYAYIEFAETQAIVSALQYSGAIFGGKPIKVTHSKNAVS 239
Query: 243 KPQTKSNE 250
KP K ++
Sbjct: 240 KPPPKHSD 247
>UniRef50_O01159 Cluster: Probable splicing factor,
arginine/serine-rich 7; n=3; Caenorhabditis|Rep:
Probable splicing factor, arginine/serine-rich 7 -
Caenorhabditis elegans
Length = 452
Score = 142 bits (344), Expect = 2e-32
Identities = 86/258 (33%), Positives = 139/258 (53%), Gaps = 10/258 (3%)
Query: 7 RVIQVTNIAPQATKDQMQTLFGYLGKIDDIRLYPTIRDVSCPVQSRICYVKYYDSANVNV 66
+++ V NI+ AT+D + +F YLGKI D+++YP+ +++ + ++K+ D V V
Sbjct: 10 KILHVANISTSATRDHIYNMFNYLGKIQDLKVYPSEGNITANTLLKTAFIKFDDERCVEV 69
Query: 67 AQHMTNTVFIDRALIVIPVQSGEIPDEHKALEMSSNGTLVPGLSSVEPRLPMHVINTL-D 125
AQH+TNTV ID A++ +P + IPDE +S G+ G + +LP HV N + +
Sbjct: 70 AQHLTNTVVIDCAIVCLPYPNPVIPDEESF--FNSGGSTTAG----QRQLPPHVTNKIQE 123
Query: 126 GIPPNQVIQTHDANLTAAGXXXXXXXXXXXDSRKIEEIRRTVLVAD-TGSLTSQQLIDHF 184
+ ++ T D L G DS K+EEIRRTV V + + ++++ F
Sbjct: 124 SDDGSALLITVDPTLEQLGLPAYPPLPADTDSAKVEEIRRTVYVGNLPKGVDGNEVLELF 183
Query: 185 -CQAGEVKYMRFCS-RDVDTLKYALIEMTEQEAVIKALHLNGSTLDGQTIQVYHATQSIC 242
GEV Y R S D YA +E ++Q +V AL +G + +++ H+ +I
Sbjct: 184 NMYFGEVMYARMASGPDALPCAYAYVEFSQQASVCNALQNDGFEFKERPLKIQHSRVAII 243
Query: 243 KPQTKSNEAAQREIEEAM 260
KPQ K++E A EIEEA+
Sbjct: 244 KPQAKTDEQALGEIEEAI 261
>UniRef50_Q4S294 Cluster: Chromosome undetermined SCAF14764, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF14764,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 386
Score = 134 bits (325), Expect = 5e-30
Identities = 76/174 (43%), Positives = 105/174 (60%), Gaps = 6/174 (3%)
Query: 6 TRVIQVTNIAPQATKDQMQTLFGYLGKIDDIRLYPTIRDVSCPVQSRICYVKYYDSANVN 65
T V+QVTN++ + +QM+TLFG+LG ID++RLYP + + S++CY+KY D ++V
Sbjct: 2 TNVVQVTNLSSAVSSEQMRTLFGFLGDIDELRLYPP-DNAALSFSSKVCYIKYRDPSSVG 60
Query: 66 VAQHMTNTVFIDRALIVIPVQSGEIPDEHKALEMSSNGTLVPGLSSVEPRLPMHVINTLD 125
VAQH+TNTVFIDRALIV+P G+IP+E KAL + + T VP L LP+ N L
Sbjct: 61 VAQHLTNTVFIDRALIVVPCAEGKIPEEAKALSLLAPSTPVPSLIPGGGLLPIPASNPLQ 120
Query: 126 GIPPNQVIQTHDANL-TAAGXXXXXXXXXXXDSRKIEEIRRTVLVADTGSLTSQ 178
+ ++ A L AA D K++EIRRTV V G+L SQ
Sbjct: 121 NL-NLPIVNRMSAGLEIAASVPSQPPLMGNVDPTKVDEIRRTVYV---GNLNSQ 170
Score = 46.0 bits (104), Expect = 0.003
Identities = 18/49 (36%), Positives = 32/49 (65%)
Query: 176 TSQQLIDHFCQAGEVKYMRFCSRDVDTLKYALIEMTEQEAVIKALHLNG 224
T++QL++ F Q G VK++R + ++A +E +EQ++V +AL NG
Sbjct: 205 TAEQLLEFFRQVGSVKFVRMAGDETQPTRFAFVEFSEQDSVARALTFNG 253
>UniRef50_Q05519 Cluster: Splicing factor arginine/serine-rich 11;
n=54; Euteleostomi|Rep: Splicing factor
arginine/serine-rich 11 - Homo sapiens (Human)
Length = 484
Score = 130 bits (313), Expect = 1e-28
Identities = 60/106 (56%), Positives = 79/106 (74%), Gaps = 1/106 (0%)
Query: 4 GSTRVIQVTNIAPQATKDQMQTLFGYLGKIDDIRLYPTIRDVSCPVQSRICYVKYYDSAN 63
G T VIQVTN++P A+ +QM+TLFG+LGKID++RL+P D PV SR+C+VK++D +
Sbjct: 30 GGTEVIQVTNVSPSASSEQMRTLFGFLGKIDELRLFPP-DDSPLPVSSRVCFVKFHDPDS 88
Query: 64 VNVAQHMTNTVFIDRALIVIPVQSGEIPDEHKALEMSSNGTLVPGL 109
VAQH+TNTVF+DRALIV+P G IPDE KAL + + V GL
Sbjct: 89 AVVAQHLTNTVFVDRALIVVPYAEGVIPDEAKALSLLAPANAVAGL 134
Score = 43.2 bits (97), Expect = 0.021
Identities = 21/41 (51%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Query: 236 HATQSICKPQTKSNEAAQREIEEAMCRVKEAQNFISAAIDP 276
H + P KS + + +EIEEAM RV+EAQ+ ISAAI+P
Sbjct: 200 HVAAGLVSPSLKS-DTSSKEIEEAMKRVREAQSLISAAIEP 239
>UniRef50_UPI00006602BB Cluster: Splicing factor,
arginine/serine-rich 12 (Serine-arginine-rich- splicing
regulatory protein 86) (SRrp86) (Splicing regulatory
protein 508) (SRrp508).; n=1; Takifugu rubripes|Rep:
Splicing factor, arginine/serine-rich 12
(Serine-arginine-rich- splicing regulatory protein 86)
(SRrp86) (Splicing regulatory protein 508) (SRrp508). -
Takifugu rubripes
Length = 330
Score = 124 bits (299), Expect = 7e-27
Identities = 59/122 (48%), Positives = 83/122 (68%), Gaps = 1/122 (0%)
Query: 6 TRVIQVTNIAPQATKDQMQTLFGYLGKIDDIRLYPTIRDVSCPVQSRICYVKYYDSANVN 65
T V+QVTN++ + +QM+TLFG+LG ID++RLYP + + S++CY+KY D ++V
Sbjct: 1 TNVVQVTNLSSAVSSEQMRTLFGFLGDIDELRLYPP-DNAALSFSSKVCYIKYRDPSSVG 59
Query: 66 VAQHMTNTVFIDRALIVIPVQSGEIPDEHKALEMSSNGTLVPGLSSVEPRLPMHVINTLD 125
VAQH+TNTVFIDRALIV+P G+IP+E KAL + + T VP L LP+ N L
Sbjct: 60 VAQHLTNTVFIDRALIVVPCAEGKIPEEAKALSLLAPSTPVPSLIPSGGLLPIPAPNPLQ 119
Query: 126 GI 127
+
Sbjct: 120 NV 121
Score = 46.8 bits (106), Expect = 0.002
Identities = 22/53 (41%), Positives = 35/53 (66%)
Query: 225 STLDGQTIQVYHATQSICKPQTKSNEAAQREIEEAMCRVKEAQNFISAAIDPV 277
S+ + Q+ H+ +I KP + +AA +E+E M RV+EAQ+ I+AAI+PV
Sbjct: 147 SSSEPDVSQINHSNNAIVKPPELTPQAAAKELESVMKRVREAQSTIAAAIEPV 199
>UniRef50_Q5BXR0 Cluster: SJCHGC01048 protein; n=2; Schistosoma
japonicum|Rep: SJCHGC01048 protein - Schistosoma
japonicum (Blood fluke)
Length = 191
Score = 124 bits (299), Expect = 7e-27
Identities = 68/179 (37%), Positives = 106/179 (59%), Gaps = 6/179 (3%)
Query: 2 VSGSTRVIQVTNIAPQATKDQMQTLFGYLGKIDDIRLYPTIRDVSCPVQSRICYVKYYDS 61
+S RV+QVTN++P AT DQ++TLFG++G ++++ +YP+ D + S++CY++Y +
Sbjct: 11 LSRKCRVVQVTNVSPSATSDQLRTLFGHVGVLEEVVVYPS--DDKEELASKVCYIRYQEP 68
Query: 62 ANVNVAQHMTNTVFIDRALIVIPVQSGE---IPDEHKALEMSSNGTLVPGLSSVEPRLPM 118
N VA H+ NTVF+DRALIV+P+ SG+ IPDE A + + G+ P+
Sbjct: 69 INAEVALHLNNTVFLDRALIVLPL-SGDRDAIPDEKYANLVRAPPNTAAGVLPRTADWPL 127
Query: 119 HVINTLDGIPPNQVIQTHDANLTAAGXXXXXXXXXXXDSRKIEEIRRTVLVADTGSLTS 177
VI+ + G P QVI T + L++ D +IEEIRRT+LV + T+
Sbjct: 128 DVISMVVGRPGEQVIHTMEPRLSSLAFPLYPPLPATTDGSRIEEIRRTILVTNLDPKTT 186
>UniRef50_Q8BYD3 Cluster: 0 day neonate thymus cDNA, RIKEN
full-length enriched library, clone:A430101C24
product:RIKEN cDNA 2610019N13; n=3; Murinae|Rep: 0 day
neonate thymus cDNA, RIKEN full-length enriched library,
clone:A430101C24 product:RIKEN cDNA 2610019N13 - Mus
musculus (Mouse)
Length = 199
Score = 113 bits (271), Expect = 2e-23
Identities = 50/85 (58%), Positives = 67/85 (78%), Gaps = 1/85 (1%)
Query: 4 GSTRVIQVTNIAPQATKDQMQTLFGYLGKIDDIRLYPTIRDVSCPVQSRICYVKYYDSAN 63
G T VIQVTN++P A+ +QM+TLFG+LGKID++RL+P D PV SR+C+VK++D +
Sbjct: 58 GGTEVIQVTNVSPSASSEQMRTLFGFLGKIDELRLFPP-DDSPLPVSSRVCFVKFHDPDS 116
Query: 64 VNVAQHMTNTVFIDRALIVIPVQSG 88
VAQH+TNTVF+DRALIV+P G
Sbjct: 117 AVVAQHLTNTVFVDRALIVVPYAEG 141
>UniRef50_Q8WXA9 Cluster: Splicing factor, arginine/serine-rich 12;
n=27; Euteleostomi|Rep: Splicing factor,
arginine/serine-rich 12 - Homo sapiens (Human)
Length = 508
Score = 106 bits (254), Expect = 2e-21
Identities = 57/155 (36%), Positives = 88/155 (56%), Gaps = 3/155 (1%)
Query: 137 DANLTAAGXXXXXXXXXXXDSRKIEEIRRTVLVADTGS--LTSQQLIDHFCQAGEVKYMR 194
D N+ G D KI+EIRRTV V + S T+ QL++ F Q GEVK++R
Sbjct: 38 DPNIATLGEIPQPPLMGNVDPSKIDEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVR 97
Query: 195 FCSRDVDTLKYALIEMTEQEAVIKALHLNGSTLDGQTIQVYHATQSICKPQTKSNEAAQR 254
+ ++A +E +Q +V +AL NG + +++ H+ +I KP + +AA +
Sbjct: 98 MAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRPLKINHSNNAIVKPPEMTPQAAAK 157
Query: 255 EIEEAMCRVKEAQNFISAAIDPVIGLLSKDKRSSR 289
E+EE M RV+EAQ+FISAAI+P G S +++ R
Sbjct: 158 ELEEVMKRVREAQSFISAAIEPESG-KSNERKGGR 191
>UniRef50_UPI000069EBBF Cluster: Splicing factor,
arginine/serine-rich 12 (Serine-arginine-rich- splicing
regulatory protein 86) (SRrp86) (Splicing regulatory
protein 508) (SRrp508).; n=2; Tetrapoda|Rep: Splicing
factor, arginine/serine-rich 12 (Serine-arginine-rich-
splicing regulatory protein 86) (SRrp86) (Splicing
regulatory protein 508) (SRrp508). - Xenopus tropicalis
Length = 500
Score = 103 bits (246), Expect = 2e-20
Identities = 48/126 (38%), Positives = 81/126 (64%), Gaps = 2/126 (1%)
Query: 156 DSRKIEEIRRTVLVADTGS--LTSQQLIDHFCQAGEVKYMRFCSRDVDTLKYALIEMTEQ 213
D K++EIRRT+ V + S T++QL++ F Q G+V+++R + ++A +E ++Q
Sbjct: 56 DPTKVDEIRRTIYVGNLNSQTTTAEQLLEFFKQVGDVRFVRMAGDETQPTRFAFVEFSDQ 115
Query: 214 EAVIKALHLNGSTLDGQTIQVYHATQSICKPQTKSNEAAQREIEEAMCRVKEAQNFISAA 273
+V +AL NG + +++ H+ +I KP + +AA +E+EE M RV+EAQ+FISAA
Sbjct: 116 NSVTRALTFNGVMFGDRPLKINHSNNAIVKPPEMTPQAAAKELEEVMKRVREAQSFISAA 175
Query: 274 IDPVIG 279
I+P G
Sbjct: 176 IEPETG 181
>UniRef50_UPI0000DBF390 Cluster: splicing factor,
arginine/serine-rich 12; n=3; Rattus norvegicus|Rep:
splicing factor, arginine/serine-rich 12 - Rattus
norvegicus
Length = 485
Score = 96.3 bits (229), Expect = 2e-18
Identities = 50/138 (36%), Positives = 83/138 (60%), Gaps = 3/138 (2%)
Query: 156 DSRKIEEIRRTVLVADTGSLT--SQQLIDHFCQAGEVKYMRFCSRDVDTLKYALIEMTEQ 213
D + +EIRRT+ V + S T + Q+++ F Q GEVK+ + ++A +E +Q
Sbjct: 62 DPSRTDEIRRTIHVGNLNSQTMSADQILEFFKQVGEVKFFPMADDETQPTQFAFVEFADQ 121
Query: 214 EAVIKALHLNGSTLDGQTIQVYHATQSICKPQTKSNEAAQREIEEAMCRVKEAQNFISAA 273
+V +AL NG T + +++ H+ +I KP + +A +E+EE M RV+EAQ+FISAA
Sbjct: 122 NSVPRALAFNGVTFGDRGLKINHSQNAIVKPPEMAPQAVVKELEETMKRVREAQSFISAA 181
Query: 274 IDPVIGLLSKDKRSSRWP 291
I+P G S +++S + P
Sbjct: 182 IEPKSG-KSNERKSRQSP 198
>UniRef50_Q5XJE4 Cluster: Sfrs11 protein; n=2; Mus musculus|Rep:
Sfrs11 protein - Mus musculus (Mouse)
Length = 102
Score = 62.1 bits (144), Expect = 4e-08
Identities = 28/49 (57%), Positives = 37/49 (75%), Gaps = 1/49 (2%)
Query: 4 GSTRVIQVTNIAPQATKDQMQTLFGYLGKIDDIRLYPTIRDVSCPVQSR 52
G T VIQVTN++P A+ +QM+TLFG+LGKID++RL+P D PV R
Sbjct: 31 GGTEVIQVTNVSPSASSEQMRTLFGFLGKIDELRLFPP-DDSPLPVSER 78
>UniRef50_Q2V4J4 Cluster: Uncharacterized protein At1g32790.2; n=15;
Magnoliophyta|Rep: Uncharacterized protein At1g32790.2 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 406
Score = 50.4 bits (115), Expect = 1e-04
Identities = 28/86 (32%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Query: 157 SRKIEEIRRTVLVADTGS-LTSQQLIDHFCQAGEVKYMRFCSRDVDTLKYALIEMTEQEA 215
+++ + IRRTV V+D +T +QL F G+V R C L++A IE T++E
Sbjct: 165 AQREDVIRRTVYVSDLDQQVTEEQLAGLFVSCGQVVDCRICGDPNSVLRFAFIEFTDEEG 224
Query: 216 VIKALHLNGSTLDGQTIQVYHATQSI 241
+ AL+L+G+ L ++V + +I
Sbjct: 225 AMTALNLSGTMLGFYPVKVLPSKTAI 250
>UniRef50_A2ZQJ5 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 287
Score = 48.8 bits (111), Expect = 4e-04
Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 161 EEIRRTVLVADTG-SLTSQQLIDHFCQAGEVKYMRFCSRDVDTLKYALIEMTEQEAVIKA 219
+ IRRTV V+D ++T ++L D F G+V R C L++A IE ++E A
Sbjct: 128 DSIRRTVYVSDIDHTVTEERLADIFANCGQVVDCRICGDPHSVLRFAFIEFADEEGARTA 187
Query: 220 LHLNGSTLDGQTIQVYHATQSI 241
L+L G+ L ++V + +I
Sbjct: 188 LNLGGTMLGFYPVRVLPSKTAI 209
>UniRef50_Q9FGE6 Cluster: RNA-binding protein-like; n=1; Arabidopsis
thaliana|Rep: RNA-binding protein-like - Arabidopsis
thaliana (Mouse-ear cress)
Length = 320
Score = 46.4 bits (105), Expect = 0.002
Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 1/97 (1%)
Query: 163 IRRTVLVADTGS-LTSQQLIDHFCQAGEVKYMRFCSRDVDTLKYALIEMTEQEAVIKALH 221
I+RTV V+D + +T +QL F G+V R C L++A IE T+ E AL
Sbjct: 135 IKRTVYVSDIDNQVTEEQLASLFLSCGQVVDCRMCGDYKSILRFAFIEFTDAEGARSALR 194
Query: 222 LNGSTLDGQTIQVYHATQSICKPQTKSNEAAQREIEE 258
+G+ I+V+ + +I ++ E+E+
Sbjct: 195 KSGTMFGSHPIRVFMSKTAIAPVNPSFLPQSKDELEK 231
>UniRef50_Q4MZ00 Cluster: Splicing factor, putative; n=2;
Theileria|Rep: Splicing factor, putative - Theileria
parva
Length = 644
Score = 45.6 bits (103), Expect = 0.004
Identities = 40/133 (30%), Positives = 75/133 (56%), Gaps = 16/133 (12%)
Query: 158 RKIEEIRR---TVLVADTG-SLTSQQLIDHFCQ-AGEVKYMRFCSRDVDTLK---YALIE 209
+ IEE +R TVLV++ S+ + + + F + AG+V+ ++ C RD+ + + A +E
Sbjct: 308 KDIEEAQRDDLTVLVSNMHLSVDERDIYELFSEHAGKVRDIQ-CVRDLRSGRSKGIAYVE 366
Query: 210 MTEQEAVIKALHLNGSTLDGQTIQVYHATQSICKPQTKSNEAAQREIEEAMCRVKEAQNF 269
QE+VIKAL + G ++ GQ I+V+ + Q + N AA+ + + +KE+ N
Sbjct: 367 FYTQESVIKALSMTGMSMKGQGIRVHSS-------QAEKNRAAKAQKQLQDNALKESDNP 419
Query: 270 ISAAIDPVIGLLS 282
+ + ++G+LS
Sbjct: 420 TTIVVSNLLGVLS 432
>UniRef50_UPI000049976A Cluster: hypothetical protein 110.t00007;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
protein 110.t00007 - Entamoeba histolytica HM-1:IMSS
Length = 333
Score = 44.4 bits (100), Expect = 0.009
Identities = 20/79 (25%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 156 DSRKIEEIRRTVLVADTGSLTSQQLIDHFCQAGEVKYMRFCSRDVDTLKYALIEMTEQEA 215
+S+ ++R+T+ V + G+ + ++ +F + G + M F + + T++ IE +EA
Sbjct: 128 ESKASTKLRKTICVRNIGNASDDKIQKYFEKCGNINLMEFNTGET-TIRQVTIEFETEEA 186
Query: 216 VIKALHLNGSTLDGQTIQV 234
++AL ++GS+ + I+V
Sbjct: 187 ALRALQMDGSSFNDHPIRV 205
>UniRef50_Q54QQ7 Cluster: Putative RNA splicing factor; n=1;
Dictyostelium discoideum AX4|Rep: Putative RNA splicing
factor - Dictyostelium discoideum AX4
Length = 727
Score = 43.2 bits (97), Expect = 0.021
Identities = 33/121 (27%), Positives = 55/121 (45%), Gaps = 5/121 (4%)
Query: 161 EEIRRTVLVADTG-SLTSQQLIDHFCQAGEVKYMRFCSRDVDTLKYAL--IEMTEQEAVI 217
E +RTV V+ ++ + L D F QAG V +R + V + +E +++E V
Sbjct: 262 ESDQRTVFVSKLSQNIVEKDLSDLFSQAGTVLNVRLITDKVTKRMKGVGYVEFSQKEMVD 321
Query: 218 KALHLNGSTLDGQTIQVY--HATQSICKPQTKSNEAAQREIEEAMCRVKEAQNFISAAID 275
KA+ L+GS LDGQ I V+ + + K + + + I + A+ I
Sbjct: 322 KAIALSGSVLDGQQILVHSIQPEKKVIKSNSTGSSGGESRIYVGYIHLSVAEEQIRVIFQ 381
Query: 276 P 276
P
Sbjct: 382 P 382
>UniRef50_Q9LPI3 Cluster: T3F20.1 protein; n=14; Magnoliophyta|Rep:
T3F20.1 protein - Arabidopsis thaliana (Mouse-ear cress)
Length = 829
Score = 42.7 bits (96), Expect = 0.028
Identities = 24/86 (27%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 157 SRKIEEIRRTVLVADTG-SLTSQQLIDHFCQAGEVKYMRFCSRDVDTLKYALIEMTEQEA 215
+++ + IRRTV V+D S+T + L F G+V R C L++A +E ++ +
Sbjct: 65 AQREDSIRRTVYVSDIDQSVTEEGLAGLFSSCGQVVDCRICGDPNSVLRFAFVEFSDDQG 124
Query: 216 VIKALHLNGSTLDGQTIQVYHATQSI 241
AL L G+ + ++V + +I
Sbjct: 125 ARSALSLGGTMIGYYPVRVLPSKTAI 150
>UniRef50_A5AY54 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 642
Score = 42.3 bits (95), Expect = 0.037
Identities = 24/86 (27%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 157 SRKIEEIRRTVLVADTGS-LTSQQLIDHFCQAGEVKYMRFCSRDVDTLKYALIEMTEQEA 215
+++ + IRRTV V+D +T ++L F G+V R C L++A +E ++
Sbjct: 342 AQREDSIRRTVYVSDIDQHVTEERLAALFSSCGQVVDCRVCGDPHSVLRFAFVEFADEHG 401
Query: 216 VIKALHLNGSTLDGQTIQVYHATQSI 241
AL+L G+ L ++V + +I
Sbjct: 402 ARAALNLGGTMLGYYPVRVLPSKTAI 427
>UniRef50_A7TRB8 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 449
Score = 41.1 bits (92), Expect = 0.085
Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 156 DSRKIEEIRRTVLVADTGSLTSQQLIDHFCQAGEVKYMRFCSRDVD--TLKYALIEMTEQ 213
D+ +E + D+ +T Q+L + F + G+++ ++ + + YA I T
Sbjct: 195 DAALLEHREIYITNLDSDQITEQKLSEWFSKFGDIERIKLVKNENEPGNTSYAFISFTSS 254
Query: 214 EAVIKALHLNGSTLDGQTIQV 234
++ KAL L+ TL+G TI V
Sbjct: 255 DSATKALELHKETLEGNTITV 275
>UniRef50_A3BP23 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 367
Score = 40.7 bits (91), Expect = 0.11
Identities = 21/67 (31%), Positives = 36/67 (53%)
Query: 175 LTSQQLIDHFCQAGEVKYMRFCSRDVDTLKYALIEMTEQEAVIKALHLNGSTLDGQTIQV 234
+T +QL F G+V R C L++A IE T++E+ AL+L+G+ L ++V
Sbjct: 197 VTEEQLAALFINCGQVVDCRMCGDPNSVLRFAFIEFTDEESARAALNLSGTVLGYYPVRV 256
Query: 235 YHATQSI 241
+ +I
Sbjct: 257 LPSKTAI 263
>UniRef50_Q4T2I8 Cluster: Chromosome undetermined SCAF10260, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF10260,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 345
Score = 40.3 bits (90), Expect = 0.15
Identities = 23/40 (57%), Positives = 29/40 (72%), Gaps = 4/40 (10%)
Query: 250 EAAQREIEEAMCRVKEAQNFISAAIDPVIGLLSKDKRSSR 289
+A+ +EIEEAM RV+EAQ+ ISAAI+P SK R SR
Sbjct: 73 DASSKEIEEAMKRVREAQSLISAAIEPG----SKSPRRSR 108
>UniRef50_Q1JTD1 Cluster: Possible RNA-binding protein; n=1;
Toxoplasma gondii RH|Rep: Possible RNA-binding protein
- Toxoplasma gondii RH
Length = 982
Score = 40.3 bits (90), Expect = 0.15
Identities = 21/82 (25%), Positives = 44/82 (53%), Gaps = 4/82 (4%)
Query: 5 STRVIQVTNIAPQATKDQMQTLFGYLGKIDDIRLYPTIRDVSCPVQSRICYVKYYDSANV 64
+ V+ + N++P T+D ++ +F + G+I +I + + P Q R C +++ DSA +
Sbjct: 19 TANVLYIKNLSPLVTEDHIRQIFTHCGEILNIGFKAYLNN---PAQ-RYCVLEFKDSAGI 74
Query: 65 NVAQHMTNTVFIDRALIVIPVQ 86
A + NT ++ + V V+
Sbjct: 75 TAASQLNNTPLLNVPMTVTVVE 96
>UniRef50_Q9LIR7 Cluster: Genomic DNA, chromosome 3, BAC
clone:F14O13; n=5; core eudicotyledons|Rep: Genomic DNA,
chromosome 3, BAC clone:F14O13 - Arabidopsis thaliana
(Mouse-ear cress)
Length = 1006
Score = 39.9 bits (89), Expect = 0.20
Identities = 29/99 (29%), Positives = 48/99 (48%), Gaps = 13/99 (13%)
Query: 7 RVIQVTNIAPQATKDQMQTLFGYLGKIDDIRLYPTIRDVSCPVQSRICYVKYYDSANVNV 66
+ +QV+N++P T +Q++ LF + G T+ D S I Y++Y +S
Sbjct: 351 KFLQVSNLSPSLTTEQLRQLFSFCG---------TVVDCSITDSKHIAYIEYSNSEEATA 401
Query: 67 AQHMTNTVFIDRALIVIPVQSGEIPDEHKALEMSSNGTL 105
A + NT RAL V +S +P HK +S+ +L
Sbjct: 402 ALALNNTEVFGRALNVEIAKS--LP--HKPSSNNSSSSL 436
>UniRef50_Q7PVV0 Cluster: ENSANGP00000016779; n=2; Culicidae|Rep:
ENSANGP00000016779 - Anopheles gambiae str. PEST
Length = 234
Score = 39.9 bits (89), Expect = 0.20
Identities = 32/115 (27%), Positives = 52/115 (45%), Gaps = 3/115 (2%)
Query: 164 RRTVLVADTG-SLTSQQLIDHFCQAGEVKYMRFCSRDVDTLKYALIEMTEQEAVIKALHL 222
R +LV + S +++ +HF QAG VK +R + +A +EM + KA L
Sbjct: 97 RLVLLVKNVNFSTAKEEIAEHFDQAGRVKGVRIPKHR--SSGFAFVEMQNADGFQKAFLL 154
Query: 223 NGSTLDGQTIQVYHATQSICKPQTKSNEAAQREIEEAMCRVKEAQNFISAAIDPV 277
+GS LDG+ I V + K T+ ++ E R ++ +A I V
Sbjct: 155 DGSYLDGRKISVNLSESGNKKSATRIQLLEKKNAEILKLRKNNRKSVKAAEISLV 209
>UniRef50_P40561 Cluster: RNA-binding protein SGN1; n=2;
Saccharomyces cerevisiae|Rep: RNA-binding protein SGN1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 250
Score = 39.9 bits (89), Expect = 0.20
Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
Query: 157 SRKIEEIRRTVLVAD-TGSLTSQQLIDHFCQAGEVKYMRFC-SRDVDTLK-YALIEMTEQ 213
+ ++E R++ V + T +T +Q+ DHF G++K + R+ T K Y IE
Sbjct: 56 AHQLEADSRSIFVGNITPDVTPEQIEDHFKDCGQIKRITLLYDRNTGTPKGYGYIEFESP 115
Query: 214 EAVIKALHLNGSTLDGQTIQV 234
KAL LNG L G+ I V
Sbjct: 116 AYREKALQLNGGELKGKKIAV 136
>UniRef50_Q4FYT7 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major strain Friedlin
Length = 495
Score = 38.7 bits (86), Expect = 0.45
Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Query: 158 RKIEEIRRTVLVADT-GSLTSQQLIDHFCQAGEVKYMRFCSRDVDTLKYALIEMTEQEAV 216
R+ E RRT+ V+ G L L++ AG V +R C+ +A +EM E
Sbjct: 371 RQDEMKRRTIYVSHLPGLLPQSMLLELLTTAGPVNKVRICAGAGYCTLFAFVEMRTLEGA 430
Query: 217 IKALHLNGSTLDGQTIQVYHATQSI 241
+A+ +NG L G I+V A ++
Sbjct: 431 QRAMCMNGLQLMGFAIRVQTARNAV 455
>UniRef50_A7AMD5 Cluster: Splicing factor, CC1-like family protein;
n=1; Babesia bovis|Rep: Splicing factor, CC1-like family
protein - Babesia bovis
Length = 488
Score = 38.7 bits (86), Expect = 0.45
Identities = 35/110 (31%), Positives = 59/110 (53%), Gaps = 9/110 (8%)
Query: 158 RKIEEIRR---TVLVADTG-SLTSQQLIDHFCQ-AGEVKYMRFCSRDVDTLK---YALIE 209
R+IEE +R TVLV + +++ + F + AG+V+ ++ C RD + + A +E
Sbjct: 133 REIEEAQREDLTVLVINLYLGADERKIYEVFSEHAGKVRDVQ-CVRDARSGRSKGVAYVE 191
Query: 210 MTEQEAVIKALHLNGSTLDGQTIQVYHATQSICKPQTKSNEAAQREIEEA 259
QE+VIKAL +NG L+GQ I+V + + + Q+ +E A
Sbjct: 192 FYTQESVIKALAMNGFELNGQRIRVQSSQAEKNRAARAAKMIQQQTVEVA 241
>UniRef50_Q3ECG3 Cluster: Uncharacterized protein At1g67950.3; n=7;
Arabidopsis thaliana|Rep: Uncharacterized protein
At1g67950.3 - Arabidopsis thaliana (Mouse-ear cress)
Length = 279
Score = 38.3 bits (85), Expect = 0.60
Identities = 22/97 (22%), Positives = 47/97 (48%), Gaps = 7/97 (7%)
Query: 2 VSGSTRVIQVTNIAPQATKDQMQTLFGYLGKIDDIRLYPTIRDVSCPVQSRICYVKYYDS 61
VSG + ++++N++ +K ++ F + G I + + ++ S++ YV + DS
Sbjct: 25 VSG-VKTVKISNVSLIVSKKDVKEFFSFSGDIQYVEMRSETQE------SQVAYVTFKDS 77
Query: 62 ANVNVAQHMTNTVFIDRALIVIPVQSGEIPDEHKALE 98
A +T V D + + P + ++P E AL+
Sbjct: 78 QGAETAMLLTGAVIADLRVSITPAVNYQLPPEALALD 114
>UniRef50_Q16N17 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 239
Score = 38.3 bits (85), Expect = 0.60
Identities = 27/108 (25%), Positives = 50/108 (46%), Gaps = 5/108 (4%)
Query: 161 EEIRRTVLVADTG-SLTSQQLIDHFCQAGEVKYMRFCSRDVDTLKYALIEMTEQEAVIKA 219
++++ T+ V L+ ++L D FC+AGE++ SR + YA I + +V +A
Sbjct: 91 DDMKTTIFVGHINYQLSKKELDDFFCKAGEIQ----SSRIISKRGYAFITFADAASVEEA 146
Query: 220 LHLNGSTLDGQTIQVYHATQSICKPQTKSNEAAQREIEEAMCRVKEAQ 267
L L+ L G+ + V K + +R E+ K+A+
Sbjct: 147 LKLDKEMLAGKAVHVERVKSKKTDNFEKKQQKRKRNKEDNEKGAKKAK 194
>UniRef50_Q6CQW2 Cluster: Similarities with sp|Q8J1F4 Ashbya
gossypii Yib1; n=1; Kluyveromyces lactis|Rep:
Similarities with sp|Q8J1F4 Ashbya gossypii Yib1 -
Kluyveromyces lactis (Yeast) (Candida sphaerica)
Length = 345
Score = 38.3 bits (85), Expect = 0.60
Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 3/80 (3%)
Query: 158 RKIEEIRRTVLVAD-TGSLTSQQLIDHFCQAGEVKYMRFCSRDVDTLK--YALIEMTEQE 214
++IE R++ V + T T++ L +HF GEV + + YA IE +
Sbjct: 96 KQIELDSRSIFVGNITTEATAETLEEHFKDCGEVVRVTILYNKLTGAPKGYAYIEFESSD 155
Query: 215 AVIKALHLNGSTLDGQTIQV 234
++ KAL L S L G+TI V
Sbjct: 156 SIPKALELKDSELHGETINV 175
>UniRef50_Q388M7 Cluster: RNA-binding protein, putative; n=1;
Trypanosoma brucei|Rep: RNA-binding protein, putative -
Trypanosoma brucei
Length = 377
Score = 37.9 bits (84), Expect = 0.79
Identities = 21/76 (27%), Positives = 38/76 (50%)
Query: 174 SLTSQQLIDHFCQAGEVKYMRFCSRDVDTLKYALIEMTEQEAVIKALHLNGSTLDGQTIQ 233
S+T + L F Q G + RD D +Y I+ ++ +A+ NG TL G+ I+
Sbjct: 19 SVTLEVLRQVFSQCGTIVDCSLNGRDEDPYRYGFIDFATEDDRARAMKYNGFTLAGRKIK 78
Query: 234 VYHATQSICKPQTKSN 249
V + ++ +P+ +N
Sbjct: 79 VGISKGNVGRPEGYNN 94
>UniRef50_Q2HS59 Cluster: RNA-binding region RNP-1; n=2; Medicago
truncatula|Rep: RNA-binding region RNP-1 - Medicago
truncatula (Barrel medic)
Length = 742
Score = 37.5 bits (83), Expect = 1.1
Identities = 31/126 (24%), Positives = 54/126 (42%), Gaps = 11/126 (8%)
Query: 3 SGSTRVIQVTNIAPQATKDQMQTLFGYLGKIDDIRLYPTIRDVSCPVQSRICYVKYYDSA 62
S + + V N+ TK+Q++ LF + GKI + L P ++RI +V + + +
Sbjct: 517 SSQVKEVYVKNLPKNVTKEQLKKLFEHHGKITKVVLPPPKPGQE---KNRIGFVHFAERS 573
Query: 63 NVNVAQHMTNTVFIDRALIVIPVQSGEIPDEHKALEMSSNGTLVPGLSSVEPRLPMHVIN 122
N A T +D ++ + + + + + G+L PR P HV
Sbjct: 574 NAMKALKNTEKYVLDGQILECSLAKQQADPKAVVSNIQTQGSL--------PRYPPHVGY 625
Query: 123 TLDGIP 128
LDG P
Sbjct: 626 GLDGNP 631
>UniRef50_Q4E1W4 Cluster: RNA-binding protein, putative; n=2;
Trypanosoma cruzi|Rep: RNA-binding protein, putative -
Trypanosoma cruzi
Length = 424
Score = 37.5 bits (83), Expect = 1.1
Identities = 21/79 (26%), Positives = 40/79 (50%)
Query: 174 SLTSQQLIDHFCQAGEVKYMRFCSRDVDTLKYALIEMTEQEAVIKALHLNGSTLDGQTIQ 233
S+T + L F Q G + RD D +Y I+ ++ +A+ NG TL G+ I+
Sbjct: 19 SVTLEVLRQVFSQCGVIIDCSLNGRDEDPYRYGFIDFASEDDRARAMKYNGFTLAGRKIK 78
Query: 234 VYHATQSICKPQTKSNEAA 252
V + ++ +P+ +N ++
Sbjct: 79 VGVSKGNVGRPEGFNNTSS 97
>UniRef50_Q8J1F4 Cluster: Yib1; n=1; Eremothecium gossypii|Rep: Yib1
- Ashbya gossypii (Yeast) (Eremothecium gossypii)
Length = 324
Score = 37.5 bits (83), Expect = 1.1
Identities = 24/81 (29%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 157 SRKIEEIRRTVLVAD-TGSLTSQQLIDHFCQAGEVKYMR--FCSRDVDTLKYALIEMTEQ 213
++++E R+V V+ T T++ L +HF G + + + + + YA I+
Sbjct: 75 AKQVELDSRSVFVSSITPEATAEMLEEHFKDVGVISRITILYNKKTGEPKGYAYIQFESI 134
Query: 214 EAVIKALHLNGSTLDGQTIQV 234
+V KAL L+GS+ +G TI V
Sbjct: 135 SSVEKALQLDGSSFNGNTISV 155
>UniRef50_UPI0001554F99 Cluster: PREDICTED: similar to RNA-binding
region-containing protein (RNP-1); n=1; Ornithorhynchus
anatinus|Rep: PREDICTED: similar to RNA-binding
region-containing protein (RNP-1) - Ornithorhynchus
anatinus
Length = 448
Score = 37.1 bits (82), Expect = 1.4
Identities = 18/36 (50%), Positives = 24/36 (66%)
Query: 9 IQVTNIAPQATKDQMQTLFGYLGKIDDIRLYPTIRD 44
I V N+A QATK +Q LFG+ G + IRL TI++
Sbjct: 365 IIVKNLAFQATKRDLQKLFGFYGNVKSIRLPKTIKN 400
>UniRef50_Q5A9A2 Cluster: Putative uncharacterized protein PRP24;
n=1; Candida albicans|Rep: Putative uncharacterized
protein PRP24 - Candida albicans (Yeast)
Length = 915
Score = 37.1 bits (82), Expect = 1.4
Identities = 23/94 (24%), Positives = 45/94 (47%), Gaps = 3/94 (3%)
Query: 166 TVLVADTGSLTSQQLI-DHFCQAGEVKYMRFCSRDVDTLKYALIEMTEQEAVIKALHLNG 224
TV V + + T + I D F GE+ + F + + ++YA+ + ++ V AL N
Sbjct: 545 TVKVKNIAADTDEHSIRDFFKDCGEIGDISFV--EAEGIRYAIFDFENEQQVFSALTKNY 602
Query: 225 STLDGQTIQVYHATQSICKPQTKSNEAAQREIEE 258
+LDG ++VY ++ + +Q ++E
Sbjct: 603 KSLDGNKLEVYRLQNALLFVNNYPSTFSQATVKE 636
>UniRef50_Q7F2F5 Cluster: P0402A09.11 protein; n=3; Oryza
sativa|Rep: P0402A09.11 protein - Oryza sativa subsp.
japonica (Rice)
Length = 990
Score = 36.7 bits (81), Expect = 1.8
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 9/66 (13%)
Query: 7 RVIQVTNIAPQATKDQMQTLFGYLGKIDDIRLYPTIRDVSCPVQSRICYVKYYDSANVNV 66
+++Q++N++P T D ++ LFGY GK+ D TI D I YV+Y
Sbjct: 370 KMVQISNLSPLLTVDHIKQLFGYCGKVVDC----TITD-----SKHIAYVEYSKQEEATA 420
Query: 67 AQHMTN 72
A + N
Sbjct: 421 ALALNN 426
>UniRef50_Q4QE20 Cluster: RNA-binding protein, putative; n=2;
Leishmania|Rep: RNA-binding protein, putative -
Leishmania major
Length = 409
Score = 36.7 bits (81), Expect = 1.8
Identities = 19/72 (26%), Positives = 36/72 (50%)
Query: 174 SLTSQQLIDHFCQAGEVKYMRFCSRDVDTLKYALIEMTEQEAVIKALHLNGSTLDGQTIQ 233
S+T L FCQ G + R+ D ++ I+ ++ +A+ NG TL G+ ++
Sbjct: 20 SVTIDMLKQVFCQCGTIIDCSLNGREGDPYRFGFIDFATEDDRARAMKYNGFTLVGRKLK 79
Query: 234 VYHATQSICKPQ 245
V + ++ KP+
Sbjct: 80 VGVSKGNVNKPE 91
>UniRef50_A0BHN3 Cluster: Chromosome undetermined scaffold_108,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_108,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 232
Score = 36.3 bits (80), Expect = 2.4
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 175 LTSQQLIDHFCQAGEVKYMRFCSRDVD-TLK-YALIEMTEQEAVIKALHLNGSTLDGQTI 232
L + Q+ D F G+V +R V K +A I+ + ++VIKAL +NG + G+ +
Sbjct: 104 LNADQIGDSFRPCGKVANVRMVYNTVSKNFKGFAYIDFEDHQSVIKALQMNGKKVHGRQV 163
Query: 233 QV 234
QV
Sbjct: 164 QV 165
>UniRef50_Q5KP11 Cluster: Single-stranded DNA binding protein,
putative; n=2; Filobasidiella neoformans|Rep:
Single-stranded DNA binding protein, putative -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 441
Score = 36.3 bits (80), Expect = 2.4
Identities = 30/97 (30%), Positives = 46/97 (47%), Gaps = 9/97 (9%)
Query: 161 EEIRRTVLVADTG-SLTSQQLIDHFCQAGEVKYMRFC-SRDVDTLK-YALIEMTEQEAVI 217
EE V V ++ + L F GEV R RD + + +E + E+
Sbjct: 189 EEATTNVFVGQLSWNVDNDWLKSEFESCGEVVSARVVFDRDSQKSRGFGYVEFADLESSA 248
Query: 218 KALHLNGSTLDGQTIQVYHATQSICKPQTKSNEAAQR 254
KA+ +GS +DG+ I+V +AT Q K NEAA++
Sbjct: 249 KAIEKDGSEIDGRAIRVNYAT------QRKPNEAAEK 279
>UniRef50_A6RGV4 Cluster: Putative uncharacterized protein; n=1;
Ajellomyces capsulatus NAm1|Rep: Putative
uncharacterized protein - Ajellomyces capsulatus NAm1
Length = 1384
Score = 36.3 bits (80), Expect = 2.4
Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Query: 4 GSTRVIQVTNIAPQATKDQMQTLFGYLGKIDDIRLYPTIRDVSCPVQSRICYVKYYDSAN 63
G+ + VTN AP A + ++ LF G++ DIR +P+++ R CYV++ +
Sbjct: 931 GTNTTLFVTNFAPTADEAYVRDLFSPYGEVVDIR-FPSLK---YNTHRRFCYVQFQTAIA 986
Query: 64 VNVAQHMTNT 73
+ A + T
Sbjct: 987 AHAATELNGT 996
>UniRef50_Q6CAY3 Cluster: Yarrowia lipolytica chromosome C of strain
CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome C of
strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 744
Score = 35.9 bits (79), Expect = 3.2
Identities = 31/114 (27%), Positives = 49/114 (42%), Gaps = 7/114 (6%)
Query: 185 CQAGEVKYMRFCSRDVDTLKYALIEMTEQEAVIKALH----LNGSTLDGQTIQVYHATQS 240
C A + Y+ S D T +A IE T +E +H + +++DG T V A +
Sbjct: 365 CWAKDGSYLLSASHDQTTRIFAPIEGTWREVTRPQIHGYDMICLASIDGDTF-VSGADEK 423
Query: 241 ICKPQTKSNEAAQREIEEAMCRVKEAQNFISAAIDPVIGLLSKDKRSSRWPVTG 294
I + TK A E+ E +C + + +A P +GL +K P G
Sbjct: 424 ILRTFTKPRGVA--ELLEKLCNISSGDSLPESASMPALGLSNKAVSQDEEPDEG 475
>UniRef50_Q5KIJ4 Cluster: Putative uncharacterized protein; n=2;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 1556
Score = 35.9 bits (79), Expect = 3.2
Identities = 41/145 (28%), Positives = 65/145 (44%), Gaps = 13/145 (8%)
Query: 173 GSLTSQQLIDHFCQAGEVKYMRFCSRDVDTLKYALIEMTEQE---AVIKAL---H---LN 223
G L + Q QA +Y + S + LK I MTE E A+++ L H +N
Sbjct: 1183 GELRTSQTKLLSAQAEVARYKQLHSTRDEELKEKEIAMTEVETRCAMLRNLLADHGIAVN 1242
Query: 224 GSTLDGQTIQVYHATQSICKPQTKSNEAAQREIEEAMCRVKEAQ---NFISAAIDPVIGL 280
S L+ + + QT+ +EAAQREI++ R +EA+ + ++ + G
Sbjct: 1243 DSDLEDIKAPSTRELEGKLREQTRVSEAAQREIQDLRTRCEEAEVKVESLGKLVERIKGA 1302
Query: 281 LSKDKRSSRWPVTGLGHVPGRVADL 305
S S R P G + RV++L
Sbjct: 1303 RSPTSASMRSPTPTSGEMT-RVSEL 1326
>UniRef50_O13845 Cluster: RNA-binding protein rsd1; n=1;
Schizosaccharomyces pombe|Rep: RNA-binding protein rsd1
- Schizosaccharomyces pombe (Fission yeast)
Length = 604
Score = 35.9 bits (79), Expect = 3.2
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 6/96 (6%)
Query: 161 EEIRRTVLVADTGS-LTSQQLIDHFCQAGEVKYMRFCSRDVD--TLKYALIEMTEQEAVI 217
E RRTV V+ + LTS++L D F QAG V+ + + + A +E +++V
Sbjct: 236 ERDRRTVFVSQLANRLTSRELYDFFEQAGPVRDAQIVRDKISGRSKGVAYVEFCHEDSVQ 295
Query: 218 KALHLNGSTLDGQTIQVYHATQSICKPQTKSNEAAQ 253
A+ L+G L G + + T++ + K+ EAA+
Sbjct: 296 AAIALSGKRLLGLPV-IVQLTEA--EKNRKAREAAE 328
>UniRef50_Q9VJG2 Cluster: CG12288-PA; n=2; Drosophila
melanogaster|Rep: CG12288-PA - Drosophila melanogaster
(Fruit fly)
Length = 435
Score = 35.5 bits (78), Expect = 4.2
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
Query: 161 EEIRRTVLVADTG-SLTSQQLIDHFCQAGEVKYMRFCSRDVD--TLKYALIEMTEQEAVI 217
++ +RT+ V S T +QL + F GE+ Y+R C +D D A + + +AV
Sbjct: 256 KDAKRTIFVGSLKYSATEEQLREIFSSCGEIDYIR-CLQDGDKGCKGVAYVCFQKPDAVG 314
Query: 218 KALHLNGSTLDGQTIQV 234
AL LN + LD + I V
Sbjct: 315 LALELNQTLLDDRPINV 331
>UniRef50_Q23QD3 Cluster: Polyadenylate-binding protein 2; n=1;
Tetrahymena thermophila SB210|Rep: Polyadenylate-binding
protein 2 - Tetrahymena thermophila SB210
Length = 180
Score = 35.5 bits (78), Expect = 4.2
Identities = 19/83 (22%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Query: 7 RVIQVTNIAPQATKDQMQTLFGYLGKIDDIRLYPTIRDVSCPVQSRICYVKYYDSANVNV 66
R I V N+ TK+++ +F G+I+ I + T + Y+++ D ++V +
Sbjct: 59 RSIFVQNVEYNTTKEELMDIFKDCGEIEKITIPQTRQGQG----KGFAYIQFVDKSSVEL 114
Query: 67 AQHMTNTVFIDRALIVIPVQSGE 89
A+ +++++ RA+ V+P ++ +
Sbjct: 115 AKALSDSIHRGRAIKVLPKRTNQ 137
>UniRef50_A4S1N4 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 516
Score = 35.1 bits (77), Expect = 5.6
Identities = 20/77 (25%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Query: 6 TRVIQVTNIAPQATKDQMQTLFGYLGKIDDIRLYPTIRDVSCPVQSRICYVKYYDSANVN 65
TR + VTN++ + + + F +GK+ D+R+ I D + P + YV++ D ++
Sbjct: 134 TRTVFVTNLSTKLDERGIFKFFSKVGKVTDVRI---IYDRNTPKSKGMAYVEFADKKFIH 190
Query: 66 VAQHMTNTVFIDRALIV 82
A +T +A+ V
Sbjct: 191 PALELTGQELNGQAIAV 207
>UniRef50_Q6A1B2 Cluster: Hrp59 protein; n=2; Endopterygota|Rep:
Hrp59 protein - Chironomus tentans (Midge)
Length = 525
Score = 34.7 bits (76), Expect = 7.4
Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 5/70 (7%)
Query: 166 TVLVADT-GSLTSQQLIDHFCQAGEVKYMRFCSRDVDTLKYALIEMTEQEAVIKALHLNG 224
T+LV + S T Q L D F GEVK+ D ++++ E+EA + L+G
Sbjct: 457 TILVRNLPSSWTWQNLRDKFRDVGEVKFAEIRGLDTGVVRFS----KEREADVAIKLLDG 512
Query: 225 STLDGQTIQV 234
S DG+ +++
Sbjct: 513 SRFDGRVVEI 522
>UniRef50_A4V6M0 Cluster: Rnpc2 protein; n=1; Dugesia japonica|Rep:
Rnpc2 protein - Dugesia japonica (Planarian)
Length = 278
Score = 34.7 bits (76), Expect = 7.4
Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 6/83 (7%)
Query: 4 GSTRVIQVTNIAPQATKDQMQTLFGYLGKIDDIRLYPTIRDVSCPVQSRICYVKYYDSAN 63
G T++ V+N+ PQ + ++ +F GKID++RL IR S ++ + N
Sbjct: 44 GPTKLC-VSNLHPQINEQMIEEIFSPYGKIDELRLMKDIRGTSLGT----AFILFRKGEN 98
Query: 64 V-NVAQHMTNTVFIDRALIVIPV 85
NV + M + + L + PV
Sbjct: 99 AKNVVEQMNDFNLAGQLLKIAPV 121
>UniRef50_O94290 Cluster: RNA-binding protein Cwf29; n=1;
Schizosaccharomyces pombe|Rep: RNA-binding protein Cwf29
- Schizosaccharomyces pombe (Fission yeast)
Length = 217
Score = 34.7 bits (76), Expect = 7.4
Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 4/88 (4%)
Query: 9 IQVTNIAPQATKDQMQTLFGYLGKIDDIRLYPTIRDVSCPVQSRICYVKYYDSANVNVA- 67
I + N+ +D + +F G+ DI L +RD ++KY D + +A
Sbjct: 33 IYIGNLDFDLNEDDILCVFSEFGEPVDINL---VRDKETGKSKGFAFLKYEDQRSTVLAV 89
Query: 68 QHMTNTVFIDRALIVIPVQSGEIPDEHK 95
+MTN +DR + V V S ++P + K
Sbjct: 90 DNMTNVKLLDRLVRVDHVASYKVPQKEK 117
>UniRef50_Q9V535 Cluster: RNA-binding protein 8A; n=11;
Bilateria|Rep: RNA-binding protein 8A - Drosophila
melanogaster (Fruit fly)
Length = 165
Score = 34.7 bits (76), Expect = 7.4
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Query: 179 QLIDHFCQAGEVK--YMRFCSRDVDTLKYALIEM-TEQEAVIKALHLNGSTLDGQTIQV 234
++ + FC GE+K ++ R + YAL+E T ++A+ LNG+ + GQTIQV
Sbjct: 88 EIQEKFCDYGEIKNIHLNLDRRTGFSKGYALVEYETHKQALAAKEALNGAEIMGQTIQV 146
>UniRef50_Q9MAD0 Cluster: T4P13.10 protein; n=3; rosids|Rep:
T4P13.10 protein - Arabidopsis thaliana (Mouse-ear
cress)
Length = 249
Score = 34.3 bits (75), Expect = 9.8
Identities = 17/73 (23%), Positives = 37/73 (50%), Gaps = 6/73 (8%)
Query: 8 VIQVTNIAPQATKDQMQTLFGYLGKIDDIRLYPTIRDVSCPVQSRICYVKYYDSANVNVA 67
V QVTN++PQAT+ + F + G ++ + + C + YV + D+ +++A
Sbjct: 7 VAQVTNLSPQATEKDVHRFFSHCGIVELVEI------TGCQGDALTAYVTFRDAYALDMA 60
Query: 68 QHMTNTVFIDRAL 80
++ +D+ +
Sbjct: 61 VLLSGATIVDQTV 73
>UniRef50_Q014L5 Cluster: Cyclophilin-type peptidyl-prolyl cis-trans
isomerase; n=1; Ostreococcus tauri|Rep: Cyclophilin-type
peptidyl-prolyl cis-trans isomerase - Ostreococcus tauri
Length = 252
Score = 34.3 bits (75), Expect = 9.8
Identities = 26/87 (29%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 174 SLTSQQLIDHFCQAGEVKYMRFCSRDVDTLK---YALIEMTEQEAVIKAL-HLNGSTLDG 229
+LT ++ F Q GE+ + R+ +T K +A + +Q + + A+ +LNGST+ G
Sbjct: 46 ALTEGDVLCVFSQFGEIVDVNVV-REEETGKSRGFAFVCYADQRSTVLAVDNLNGSTVGG 104
Query: 230 QTIQVYHATQSICK-PQTKSNEAAQRE 255
+ I+V H K P+ K +RE
Sbjct: 105 RIIRVEHVDDYRAKNPEEKEGREVERE 131
>UniRef50_Q4UDL3 Cluster: Rna binding protein, putative; n=2;
Theileria|Rep: Rna binding protein, putative - Theileria
annulata
Length = 178
Score = 34.3 bits (75), Expect = 9.8
Identities = 23/115 (20%), Positives = 54/115 (46%), Gaps = 5/115 (4%)
Query: 157 SRKIEEIRRTVLVADTGSLTSQQLIDHFCQAGEVKYMRFCSRDVDTLKYALIEMTEQEAV 216
S K ++ L+ D L Q++ F G++ + ++IE + +
Sbjct: 14 SEKTVKVSNLPLIFDESDL---QIL--FANVGKIVDCLLTKSPGEPTNSSIIEFSTVDEA 68
Query: 217 IKALHLNGSTLDGQTIQVYHATQSICKPQTKSNEAAQREIEEAMCRVKEAQNFIS 271
I A+ L+G ++ +++ ++ Q I KP+T + + +I+ + +V E ++ I+
Sbjct: 69 ILAVSLSGVSVRRHILRIEYSKQPISKPETAESHVSSDDIKGKIAKVLEIRDMIN 123
>UniRef50_Q8SWN2 Cluster: Putative uncharacterized protein
ECU01_0540; n=1; Encephalitozoon cuniculi|Rep: Putative
uncharacterized protein ECU01_0540 - Encephalitozoon
cuniculi
Length = 104
Score = 34.3 bits (75), Expect = 9.8
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 174 SLTSQQLIDHFCQAGEVKYMRFCSRDVDTLKYALIEMTEQEAVIKALHLNGSTLDGQTIQ 233
S+T+ + HF G + + + ++ KYA+I+ T + +V +L NGS L G+ I
Sbjct: 36 SVTNSDIAAHFRSCGNMSGINVVNPK-NSKKYAVIDFTSERSVEMSLLFNGSVLKGKKIV 94
Query: 234 V 234
V
Sbjct: 95 V 95
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.313 0.130 0.371
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 434,991,162
Number of Sequences: 1657284
Number of extensions: 14723469
Number of successful extensions: 33264
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 35
Number of HSP's that attempted gapping in prelim test: 33199
Number of HSP's gapped (non-prelim): 75
length of query: 619
length of database: 575,637,011
effective HSP length: 105
effective length of query: 514
effective length of database: 401,622,191
effective search space: 206433806174
effective search space used: 206433806174
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 75 (34.3 bits)
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