Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001870-TA|BGIBMGA001870-PA|IPR000504|RNA-binding region
RNP-1 (RNA recognition motif)
(619 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC047322-1|AAH47322.1| 386|Homo sapiens Similar to expressed se... 204 5e-52
M74002-1|AAA35554.1| 484|Homo sapiens arginine-rich nuclear pro... 130 2e-29
BC040436-1|AAH40436.1| 483|Homo sapiens splicing factor, argini... 130 2e-29
BC032727-1|AAH32727.1| 246|Homo sapiens Unknown (protein for IM... 130 2e-29
BC017359-1|AAH17359.1| 394|Homo sapiens SFRS11 protein protein. 130 2e-29
BC009840-1|AAH09840.1| 247|Homo sapiens SFRS11 protein protein. 130 2e-29
BC002784-1|AAH02784.1| 321|Homo sapiens SFRS11 protein protein. 130 2e-29
AL353771-6|CAI22334.1| 483|Homo sapiens splicing factor, argini... 130 2e-29
AL353771-5|CAI22335.1| 484|Homo sapiens splicing factor, argini... 130 2e-29
AL353771-4|CAI22333.1| 389|Homo sapiens splicing factor, argini... 130 2e-29
BC112343-1|AAI12344.1| 508|Homo sapiens SFRS12 protein protein. 106 3e-22
BC067770-1|AAH67770.1| 508|Homo sapiens splicing factor, argini... 106 3e-22
AF459094-1|AAL67778.1| 508|Homo sapiens splicing factor, argini... 106 3e-22
BX641004-1|CAE46007.1| 332|Homo sapiens hypothetical protein pr... 43 0.003
AL353771-7|CAI22336.1| 424|Homo sapiens splicing factor, argini... 43 0.003
U47742-1|AAC50662.1| 2004|Homo sapiens monocytic leukaemia zinc ... 33 2.3
BC130453-1|AAI30454.1| 1726|Homo sapiens ANKRD26 protein protein. 31 9.1
AL162272-4|CAC19649.1| 1710|Homo sapiens novel protein protein. 31 9.1
AK128577-1|BAC87508.1| 1080|Homo sapiens protein ( Homo sapiens ... 31 9.1
AB028997-1|BAA83026.2| 1715|Homo sapiens KIAA1074 protein protein. 31 9.1
>BC047322-1|AAH47322.1| 386|Homo sapiens Similar to expressed
sequence AI450757 protein.
Length = 386
Score = 204 bits (499), Expect = 5e-52
Identities = 114/292 (39%), Positives = 171/292 (58%), Gaps = 10/292 (3%)
Query: 6 TRVIQVTNIAPQATKDQMQTLFGYLGKIDDIRLYPTIRDVSCPVQSRICYVKYYDSANVN 65
T VIQVTN++ T +QM+TLF +LG+I+++RLYP + S++CYVK+ D ++V
Sbjct: 18 TSVIQVTNLSSAVTSEQMRTLFSFLGEIEELRLYPP-DNAPLAFSSKVCYVKFRDPSSVG 76
Query: 66 VAQHMTNTVFIDRALIVIPVQSGEIPDEHKALEMSSNGTLVPGLSSVEPRLPMHVINTLD 125
VAQH+TNTVFIDRALIV+P G+IP+E KAL + + + L LP+ N L
Sbjct: 77 VAQHLTNTVFIDRALIVVPCAEGKIPEESKALSLLAPAPTMTSLMPGAGLLPIPTPNPLT 136
Query: 126 --GIPPNQV----IQTHDANLTAAGXXXXXXXXXXXDSRKIEEIRRTVLVADTGS--LTS 177
G+ + + D N+ G D KI+EIRRTV V + S T+
Sbjct: 137 TLGVSLSSLGAIPAAALDPNIATLGEIPQPPLMGNVDPSKIDEIRRTVYVGNLNSQTTTA 196
Query: 178 QQLIDHFCQAGEVKYMRFCSRDVDTLKYALIEMTEQEAVIKALHLNGSTLDGQTIQVYHA 237
QL++ F Q GEVK++R + ++A +E +Q +V +AL NG + +++ H+
Sbjct: 197 DQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRPLKINHS 256
Query: 238 TQSICKPQTKSNEAAQREIEEAMCRVKEAQNFISAAIDPVIGLLSKDKRSSR 289
+I KP + +AA +E+EE M RV+EAQ+FISAAI+P G S +++ R
Sbjct: 257 NNAIVKPPEMTPQAAAKELEEVMKRVREAQSFISAAIEPESG-KSNERKGGR 307
>M74002-1|AAA35554.1| 484|Homo sapiens arginine-rich nuclear
protein protein.
Length = 484
Score = 130 bits (313), Expect = 2e-29
Identities = 60/106 (56%), Positives = 79/106 (74%), Gaps = 1/106 (0%)
Query: 4 GSTRVIQVTNIAPQATKDQMQTLFGYLGKIDDIRLYPTIRDVSCPVQSRICYVKYYDSAN 63
G T VIQVTN++P A+ +QM+TLFG+LGKID++RL+P D PV SR+C+VK++D +
Sbjct: 30 GGTEVIQVTNVSPSASSEQMRTLFGFLGKIDELRLFPP-DDSPLPVSSRVCFVKFHDPDS 88
Query: 64 VNVAQHMTNTVFIDRALIVIPVQSGEIPDEHKALEMSSNGTLVPGL 109
VAQH+TNTVF+DRALIV+P G IPDE KAL + + V GL
Sbjct: 89 AVVAQHLTNTVFVDRALIVVPYAEGVIPDEAKALSLLAPANAVAGL 134
Score = 43.2 bits (97), Expect = 0.003
Identities = 21/41 (51%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Query: 236 HATQSICKPQTKSNEAAQREIEEAMCRVKEAQNFISAAIDP 276
H + P KS + + +EIEEAM RV+EAQ+ ISAAI+P
Sbjct: 200 HVAAGLVSPSLKS-DTSSKEIEEAMKRVREAQSLISAAIEP 239
>BC040436-1|AAH40436.1| 483|Homo sapiens splicing factor,
arginine/serine-rich 11 protein.
Length = 483
Score = 130 bits (313), Expect = 2e-29
Identities = 60/106 (56%), Positives = 79/106 (74%), Gaps = 1/106 (0%)
Query: 4 GSTRVIQVTNIAPQATKDQMQTLFGYLGKIDDIRLYPTIRDVSCPVQSRICYVKYYDSAN 63
G T VIQVTN++P A+ +QM+TLFG+LGKID++RL+P D PV SR+C+VK++D +
Sbjct: 30 GGTEVIQVTNVSPSASSEQMRTLFGFLGKIDELRLFPP-DDSPLPVSSRVCFVKFHDPDS 88
Query: 64 VNVAQHMTNTVFIDRALIVIPVQSGEIPDEHKALEMSSNGTLVPGL 109
VAQH+TNTVF+DRALIV+P G IPDE KAL + + V GL
Sbjct: 89 AVVAQHLTNTVFVDRALIVVPYAEGVIPDEAKALSLLAPANAVAGL 134
Score = 43.2 bits (97), Expect = 0.003
Identities = 21/41 (51%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Query: 236 HATQSICKPQTKSNEAAQREIEEAMCRVKEAQNFISAAIDP 276
H + P KS + + +EIEEAM RV+EAQ+ ISAAI+P
Sbjct: 200 HVAAGLVSPSLKS-DTSSKEIEEAMKRVREAQSLISAAIEP 239
>BC032727-1|AAH32727.1| 246|Homo sapiens Unknown (protein for
IMAGE:5532638) protein.
Length = 246
Score = 130 bits (313), Expect = 2e-29
Identities = 60/106 (56%), Positives = 79/106 (74%), Gaps = 1/106 (0%)
Query: 4 GSTRVIQVTNIAPQATKDQMQTLFGYLGKIDDIRLYPTIRDVSCPVQSRICYVKYYDSAN 63
G T VIQVTN++P A+ +QM+TLFG+LGKID++RL+P D PV SR+C+VK++D +
Sbjct: 30 GGTEVIQVTNVSPSASSEQMRTLFGFLGKIDELRLFPP-DDSPLPVSSRVCFVKFHDPDS 88
Query: 64 VNVAQHMTNTVFIDRALIVIPVQSGEIPDEHKALEMSSNGTLVPGL 109
VAQH+TNTVF+DRALIV+P G IPDE KAL + + V GL
Sbjct: 89 AVVAQHLTNTVFVDRALIVVPYAEGVIPDEAKALSLLAPANAVAGL 134
Score = 43.2 bits (97), Expect = 0.003
Identities = 21/41 (51%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Query: 236 HATQSICKPQTKSNEAAQREIEEAMCRVKEAQNFISAAIDP 276
H + P KS + + +EIEEAM RV+EAQ+ ISAAI+P
Sbjct: 200 HVAAGLVSPSLKS-DTSSKEIEEAMKRVREAQSLISAAIEP 239
>BC017359-1|AAH17359.1| 394|Homo sapiens SFRS11 protein protein.
Length = 394
Score = 130 bits (313), Expect = 2e-29
Identities = 60/106 (56%), Positives = 79/106 (74%), Gaps = 1/106 (0%)
Query: 4 GSTRVIQVTNIAPQATKDQMQTLFGYLGKIDDIRLYPTIRDVSCPVQSRICYVKYYDSAN 63
G T VIQVTN++P A+ +QM+TLFG+LGKID++RL+P D PV SR+C+VK++D +
Sbjct: 30 GGTEVIQVTNVSPSASSEQMRTLFGFLGKIDELRLFPP-DDSPLPVSSRVCFVKFHDPDS 88
Query: 64 VNVAQHMTNTVFIDRALIVIPVQSGEIPDEHKALEMSSNGTLVPGL 109
VAQH+TNTVF+DRALIV+P G IPDE KAL + + V GL
Sbjct: 89 AVVAQHLTNTVFVDRALIVVPYAEGVIPDEAKALSLLAPANAVAGL 134
Score = 43.2 bits (97), Expect = 0.003
Identities = 21/41 (51%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Query: 236 HATQSICKPQTKSNEAAQREIEEAMCRVKEAQNFISAAIDP 276
H + P KS + + +EIEEAM RV+EAQ+ ISAAI+P
Sbjct: 200 HVAAGLVSPSLKS-DTSSKEIEEAMKRVREAQSLISAAIEP 239
>BC009840-1|AAH09840.1| 247|Homo sapiens SFRS11 protein protein.
Length = 247
Score = 130 bits (313), Expect = 2e-29
Identities = 60/106 (56%), Positives = 79/106 (74%), Gaps = 1/106 (0%)
Query: 4 GSTRVIQVTNIAPQATKDQMQTLFGYLGKIDDIRLYPTIRDVSCPVQSRICYVKYYDSAN 63
G T VIQVTN++P A+ +QM+TLFG+LGKID++RL+P D PV SR+C+VK++D +
Sbjct: 30 GGTEVIQVTNVSPSASSEQMRTLFGFLGKIDELRLFPP-DDSPLPVSSRVCFVKFHDPDS 88
Query: 64 VNVAQHMTNTVFIDRALIVIPVQSGEIPDEHKALEMSSNGTLVPGL 109
VAQH+TNTVF+DRALIV+P G IPDE KAL + + V GL
Sbjct: 89 AVVAQHLTNTVFVDRALIVVPYAEGVIPDEAKALSLLAPANAVAGL 134
Score = 43.2 bits (97), Expect = 0.003
Identities = 21/41 (51%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Query: 236 HATQSICKPQTKSNEAAQREIEEAMCRVKEAQNFISAAIDP 276
H + P KS + + +EIEEAM RV+EAQ+ ISAAI+P
Sbjct: 200 HVAAGLVSPSLKS-DTSSKEIEEAMKRVREAQSLISAAIEP 239
>BC002784-1|AAH02784.1| 321|Homo sapiens SFRS11 protein protein.
Length = 321
Score = 130 bits (313), Expect = 2e-29
Identities = 60/106 (56%), Positives = 79/106 (74%), Gaps = 1/106 (0%)
Query: 4 GSTRVIQVTNIAPQATKDQMQTLFGYLGKIDDIRLYPTIRDVSCPVQSRICYVKYYDSAN 63
G T VIQVTN++P A+ +QM+TLFG+LGKID++RL+P D PV SR+C+VK++D +
Sbjct: 30 GGTEVIQVTNVSPSASSEQMRTLFGFLGKIDELRLFPP-DDSPLPVSSRVCFVKFHDPDS 88
Query: 64 VNVAQHMTNTVFIDRALIVIPVQSGEIPDEHKALEMSSNGTLVPGL 109
VAQH+TNTVF+DRALIV+P G IPDE KAL + + V GL
Sbjct: 89 AVVAQHLTNTVFVDRALIVVPYAEGVIPDEAKALSLLAPANAVAGL 134
Score = 43.2 bits (97), Expect = 0.003
Identities = 21/41 (51%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Query: 236 HATQSICKPQTKSNEAAQREIEEAMCRVKEAQNFISAAIDP 276
H + P KS + + +EIEEAM RV+EAQ+ ISAAI+P
Sbjct: 200 HVAAGLVSPSLKS-DTSSKEIEEAMKRVREAQSLISAAIEP 239
>AL353771-6|CAI22334.1| 483|Homo sapiens splicing factor,
arginine/serine-rich 11 protein.
Length = 483
Score = 130 bits (313), Expect = 2e-29
Identities = 60/106 (56%), Positives = 79/106 (74%), Gaps = 1/106 (0%)
Query: 4 GSTRVIQVTNIAPQATKDQMQTLFGYLGKIDDIRLYPTIRDVSCPVQSRICYVKYYDSAN 63
G T VIQVTN++P A+ +QM+TLFG+LGKID++RL+P D PV SR+C+VK++D +
Sbjct: 30 GGTEVIQVTNVSPSASSEQMRTLFGFLGKIDELRLFPP-DDSPLPVSSRVCFVKFHDPDS 88
Query: 64 VNVAQHMTNTVFIDRALIVIPVQSGEIPDEHKALEMSSNGTLVPGL 109
VAQH+TNTVF+DRALIV+P G IPDE KAL + + V GL
Sbjct: 89 AVVAQHLTNTVFVDRALIVVPYAEGVIPDEAKALSLLAPANAVAGL 134
Score = 43.2 bits (97), Expect = 0.003
Identities = 21/41 (51%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Query: 236 HATQSICKPQTKSNEAAQREIEEAMCRVKEAQNFISAAIDP 276
H + P KS + + +EIEEAM RV+EAQ+ ISAAI+P
Sbjct: 200 HVAAGLVSPSLKS-DTSSKEIEEAMKRVREAQSLISAAIEP 239
>AL353771-5|CAI22335.1| 484|Homo sapiens splicing factor,
arginine/serine-rich 11 protein.
Length = 484
Score = 130 bits (313), Expect = 2e-29
Identities = 60/106 (56%), Positives = 79/106 (74%), Gaps = 1/106 (0%)
Query: 4 GSTRVIQVTNIAPQATKDQMQTLFGYLGKIDDIRLYPTIRDVSCPVQSRICYVKYYDSAN 63
G T VIQVTN++P A+ +QM+TLFG+LGKID++RL+P D PV SR+C+VK++D +
Sbjct: 30 GGTEVIQVTNVSPSASSEQMRTLFGFLGKIDELRLFPP-DDSPLPVSSRVCFVKFHDPDS 88
Query: 64 VNVAQHMTNTVFIDRALIVIPVQSGEIPDEHKALEMSSNGTLVPGL 109
VAQH+TNTVF+DRALIV+P G IPDE KAL + + V GL
Sbjct: 89 AVVAQHLTNTVFVDRALIVVPYAEGVIPDEAKALSLLAPANAVAGL 134
Score = 43.2 bits (97), Expect = 0.003
Identities = 21/41 (51%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Query: 236 HATQSICKPQTKSNEAAQREIEEAMCRVKEAQNFISAAIDP 276
H + P KS + + +EIEEAM RV+EAQ+ ISAAI+P
Sbjct: 200 HVAAGLVSPSLKS-DTSSKEIEEAMKRVREAQSLISAAIEP 239
>AL353771-4|CAI22333.1| 389|Homo sapiens splicing factor,
arginine/serine-rich 11 protein.
Length = 389
Score = 130 bits (313), Expect = 2e-29
Identities = 60/106 (56%), Positives = 79/106 (74%), Gaps = 1/106 (0%)
Query: 4 GSTRVIQVTNIAPQATKDQMQTLFGYLGKIDDIRLYPTIRDVSCPVQSRICYVKYYDSAN 63
G T VIQVTN++P A+ +QM+TLFG+LGKID++RL+P D PV SR+C+VK++D +
Sbjct: 30 GGTEVIQVTNVSPSASSEQMRTLFGFLGKIDELRLFPP-DDSPLPVSSRVCFVKFHDPDS 88
Query: 64 VNVAQHMTNTVFIDRALIVIPVQSGEIPDEHKALEMSSNGTLVPGL 109
VAQH+TNTVF+DRALIV+P G IPDE KAL + + V GL
Sbjct: 89 AVVAQHLTNTVFVDRALIVVPYAEGVIPDEAKALSLLAPANAVAGL 134
Score = 43.2 bits (97), Expect = 0.003
Identities = 21/41 (51%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Query: 236 HATQSICKPQTKSNEAAQREIEEAMCRVKEAQNFISAAIDP 276
H + P KS + + +EIEEAM RV+EAQ+ ISAAI+P
Sbjct: 200 HVAAGLVSPSLKS-DTSSKEIEEAMKRVREAQSLISAAIEP 239
>BC112343-1|AAI12344.1| 508|Homo sapiens SFRS12 protein protein.
Length = 508
Score = 106 bits (254), Expect = 3e-22
Identities = 57/155 (36%), Positives = 88/155 (56%), Gaps = 3/155 (1%)
Query: 137 DANLTAAGXXXXXXXXXXXDSRKIEEIRRTVLVADTGS--LTSQQLIDHFCQAGEVKYMR 194
D N+ G D KI+EIRRTV V + S T+ QL++ F Q GEVK++R
Sbjct: 38 DPNIATLGEIPQPPLMGNVDPSKIDEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVR 97
Query: 195 FCSRDVDTLKYALIEMTEQEAVIKALHLNGSTLDGQTIQVYHATQSICKPQTKSNEAAQR 254
+ ++A +E +Q +V +AL NG + +++ H+ +I KP + +AA +
Sbjct: 98 MAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRPLKINHSNNAIVKPPEMTPQAAAK 157
Query: 255 EIEEAMCRVKEAQNFISAAIDPVIGLLSKDKRSSR 289
E+EE M RV+EAQ+FISAAI+P G S +++ R
Sbjct: 158 ELEEVMKRVREAQSFISAAIEPESG-KSNERKGGR 191
>BC067770-1|AAH67770.1| 508|Homo sapiens splicing factor,
arginine/serine-rich 12 protein.
Length = 508
Score = 106 bits (254), Expect = 3e-22
Identities = 57/155 (36%), Positives = 88/155 (56%), Gaps = 3/155 (1%)
Query: 137 DANLTAAGXXXXXXXXXXXDSRKIEEIRRTVLVADTGS--LTSQQLIDHFCQAGEVKYMR 194
D N+ G D KI+EIRRTV V + S T+ QL++ F Q GEVK++R
Sbjct: 38 DPNIATLGEIPQPPLMGNVDPSKIDEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVR 97
Query: 195 FCSRDVDTLKYALIEMTEQEAVIKALHLNGSTLDGQTIQVYHATQSICKPQTKSNEAAQR 254
+ ++A +E +Q +V +AL NG + +++ H+ +I KP + +AA +
Sbjct: 98 MAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRPLKINHSNNAIVKPPEMTPQAAAK 157
Query: 255 EIEEAMCRVKEAQNFISAAIDPVIGLLSKDKRSSR 289
E+EE M RV+EAQ+FISAAI+P G S +++ R
Sbjct: 158 ELEEVMKRVREAQSFISAAIEPESG-KSNERKGGR 191
>AF459094-1|AAL67778.1| 508|Homo sapiens splicing factor,
arginine/serine-rich 12 protein.
Length = 508
Score = 106 bits (254), Expect = 3e-22
Identities = 57/155 (36%), Positives = 88/155 (56%), Gaps = 3/155 (1%)
Query: 137 DANLTAAGXXXXXXXXXXXDSRKIEEIRRTVLVADTGS--LTSQQLIDHFCQAGEVKYMR 194
D N+ G D KI+EIRRTV V + S T+ QL++ F Q GEVK++R
Sbjct: 38 DPNIATLGEIPQPPLMGNVDPSKIDEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVR 97
Query: 195 FCSRDVDTLKYALIEMTEQEAVIKALHLNGSTLDGQTIQVYHATQSICKPQTKSNEAAQR 254
+ ++A +E +Q +V +AL NG + +++ H+ +I KP + +AA +
Sbjct: 98 MAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRPLKINHSNNAIVKPPEMTPQAAAK 157
Query: 255 EIEEAMCRVKEAQNFISAAIDPVIGLLSKDKRSSR 289
E+EE M RV+EAQ+FISAAI+P G S +++ R
Sbjct: 158 ELEEVMKRVREAQSFISAAIEPESG-KSNERKGGR 191
>BX641004-1|CAE46007.1| 332|Homo sapiens hypothetical protein
protein.
Length = 332
Score = 43.2 bits (97), Expect = 0.003
Identities = 21/41 (51%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Query: 236 HATQSICKPQTKSNEAAQREIEEAMCRVKEAQNFISAAIDP 276
H + P KS + + +EIEEAM RV+EAQ+ ISAAI+P
Sbjct: 48 HVAAGLVSPSLKS-DTSSKEIEEAMKRVREAQSLISAAIEP 87
>AL353771-7|CAI22336.1| 424|Homo sapiens splicing factor,
arginine/serine-rich 11 protein.
Length = 424
Score = 43.2 bits (97), Expect = 0.003
Identities = 21/41 (51%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Query: 236 HATQSICKPQTKSNEAAQREIEEAMCRVKEAQNFISAAIDP 276
H + P KS + + +EIEEAM RV+EAQ+ ISAAI+P
Sbjct: 140 HVAAGLVSPSLKS-DTSSKEIEEAMKRVREAQSLISAAIEP 179
>U47742-1|AAC50662.1| 2004|Homo sapiens monocytic leukaemia zinc
finger protein protein.
Length = 2004
Score = 33.5 bits (73), Expect = 2.3
Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 9/78 (11%)
Query: 204 KYALIEMTEQEAVIKALHLNGSTLDGQTIQVYHATQSICKPQTKSNEAAQREIEEAMCRV 263
K LIE+ E+E + S LD +T+Q A QS+ + ++ +E A ++ EE +
Sbjct: 1403 KEELIELKEEEEIPH------SELDLETVQ---AVQSLTQEESSEHEGAYQDCEETLAAC 1453
Query: 264 KEAQNFISAAIDPVIGLL 281
+ Q++ A DP + ++
Sbjct: 1454 QTLQSYTQADEDPQMSMV 1471
>BC130453-1|AAI30454.1| 1726|Homo sapiens ANKRD26 protein protein.
Length = 1726
Score = 31.5 bits (68), Expect = 9.1
Identities = 16/73 (21%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 196 CSRDVDTLKYALIEMTEQEAVI-KALHLNGSTLDGQTIQVYHATQSICKPQTKSNEAAQR 254
CSR D + + + + + ++ + L S L+ I+ +H T+ + +T E Q+
Sbjct: 1057 CSRLQDKMNFDVSNLKDNNEILSQQLFKTESKLNSLEIEFHH-TRDALREKTLGLERVQK 1115
Query: 255 EIEEAMCRVKEAQ 267
++ + C++KE +
Sbjct: 1116 DLSQTQCQMKEME 1128
>AL162272-4|CAC19649.1| 1710|Homo sapiens novel protein protein.
Length = 1710
Score = 31.5 bits (68), Expect = 9.1
Identities = 16/73 (21%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 196 CSRDVDTLKYALIEMTEQEAVI-KALHLNGSTLDGQTIQVYHATQSICKPQTKSNEAAQR 254
CSR D + + + + + ++ + L S L+ I+ +H T+ + +T E Q+
Sbjct: 1041 CSRLQDKMNFDVSNLKDNNEILSQQLFKTESKLNSLEIEFHH-TRDALREKTLGLERVQK 1099
Query: 255 EIEEAMCRVKEAQ 267
++ + C++KE +
Sbjct: 1100 DLSQTQCQMKEME 1112
>AK128577-1|BAC87508.1| 1080|Homo sapiens protein ( Homo sapiens
cDNA FLJ46736 fis, clone TRACH3020769, weakly similar
to Myosin heavy chain, nonmuscle type B. ).
Length = 1080
Score = 31.5 bits (68), Expect = 9.1
Identities = 16/73 (21%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 196 CSRDVDTLKYALIEMTEQEAVI-KALHLNGSTLDGQTIQVYHATQSICKPQTKSNEAAQR 254
CSR D + + + + + ++ + L S L+ I+ +H T+ + +T E Q+
Sbjct: 598 CSRLQDKMNFDVSNLKDNNEILSQQLFKTESKLNSLEIEFHH-TRDALREKTLGLERVQK 656
Query: 255 EIEEAMCRVKEAQ 267
++ + C++KE +
Sbjct: 657 DLSQTQCQMKEME 669
>AB028997-1|BAA83026.2| 1715|Homo sapiens KIAA1074 protein protein.
Length = 1715
Score = 31.5 bits (68), Expect = 9.1
Identities = 16/73 (21%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 196 CSRDVDTLKYALIEMTEQEAVI-KALHLNGSTLDGQTIQVYHATQSICKPQTKSNEAAQR 254
CSR D + + + + + ++ + L S L+ I+ +H T+ + +T E Q+
Sbjct: 1046 CSRLQDKMNFDVSNLKDNNEILSQQLFKTESKLNSLEIEFHH-TRDALREKTLGLERVQK 1104
Query: 255 EIEEAMCRVKEAQ 267
++ + C++KE +
Sbjct: 1105 DLSQTQCQMKEME 1117
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.313 0.130 0.371
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 56,359,891
Number of Sequences: 224733
Number of extensions: 1876407
Number of successful extensions: 4174
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 4127
Number of HSP's gapped (non-prelim): 37
length of query: 619
length of database: 73,234,838
effective HSP length: 94
effective length of query: 525
effective length of database: 52,109,936
effective search space: 27357716400
effective search space used: 27357716400
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 68 (31.5 bits)
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