Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001870-TA|BGIBMGA001870-PA|IPR000504|RNA-binding region
RNP-1 (RNA recognition motif)
(619 letters)
Database: fruitfly
52,641 sequences; 24,830,863 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY069568-1|AAL39713.1| 513|Drosophila melanogaster LD29830p pro... 332 1e-90
AF055719-1|AAC32822.3| 513|Drosophila melanogaster splicing fac... 332 1e-90
AE014134-1720|AAF52825.1| 513|Drosophila melanogaster CG4602-PA... 332 1e-90
AY118842-1|AAM50702.1| 435|Drosophila melanogaster GM13065p pro... 36 0.22
AE014134-2808|AAF53587.1| 435|Drosophila melanogaster CG12288-P... 36 0.22
AY071005-1|AAL48627.1| 165|Drosophila melanogaster RE09075p pro... 35 0.38
AE013599-786|AAF58987.1| 165|Drosophila melanogaster CG8781-PA ... 35 0.38
AY118772-1|AAM50632.1| 430|Drosophila melanogaster GH11495p pro... 33 0.88
AY089603-1|AAL90341.1| 121|Drosophila melanogaster RE19804p pro... 33 0.88
AE014297-952|AAF54387.1| 632|Drosophila melanogaster CG9373-PA ... 33 0.88
AE014296-1096|AAF50675.1| 121|Drosophila melanogaster CG13298-P... 33 0.88
M59448-1|AAA28921.1| 366|Drosophila melanogaster Sxl protein. 33 1.2
M59447-1|AAA28922.1| 354|Drosophila melanogaster Sx1 protein. 33 1.2
M23636-1|AAA28884.1| 354|Drosophila melanogaster sex-linked pro... 33 1.2
BT003583-1|AAO39587.1| 352|Drosophila melanogaster LD15933p pro... 33 1.2
AE014298-1011|AAZ52512.1| 314|Drosophila melanogaster CG18350-P... 33 1.2
AE014298-1010|AAO41638.2| 314|Drosophila melanogaster CG18350-P... 33 1.2
AE014298-1009|AAF46241.3| 339|Drosophila melanogaster CG18350-P... 33 1.2
AE014298-1008|AAZ52511.1| 354|Drosophila melanogaster CG18350-P... 33 1.2
AE014298-1007|AAG22410.1| 354|Drosophila melanogaster CG18350-P... 33 1.2
AE014298-1006|AAN09198.1| 346|Drosophila melanogaster CG18350-P... 33 1.2
AE014298-1005|AAN09200.2| 346|Drosophila melanogaster CG18350-P... 33 1.2
AE014298-1004|AAZ52510.1| 344|Drosophila melanogaster CG18350-P... 33 1.2
AE014298-1003|AAN09197.1| 344|Drosophila melanogaster CG18350-P... 33 1.2
AE014298-1002|AAF46240.2| 366|Drosophila melanogaster CG18350-P... 33 1.2
AE014298-1001|AAZ52509.1| 364|Drosophila melanogaster CG18350-P... 33 1.2
AF173550-1|AAL29185.1| 165|Drosophila melanogaster Tsunagi prot... 32 2.0
AY070578-1|AAL48049.1| 154|Drosophila melanogaster RE12122p pro... 31 6.2
AY051860-1|AAK93284.1| 594|Drosophila melanogaster LD35730p pro... 31 6.2
AJ238969-1|CAB53185.1| 154|Drosophila melanogaster cap binding ... 31 6.2
AE014297-2442|AAF55496.1| 154|Drosophila melanogaster CG12357-P... 31 6.2
AE014134-1223|AAN10614.1| 594|Drosophila melanogaster CG11266-P... 31 6.2
AE014134-1222|AAF52478.1| 594|Drosophila melanogaster CG11266-P... 31 6.2
AE013599-3954|AAF47270.1| 250|Drosophila melanogaster CG3594-PA... 31 6.2
M21152-1|AAA28506.1| 483|Drosophila melanogaster elav protein. 30 8.2
BT015250-1|AAT94479.1| 1246|Drosophila melanogaster LP19005p pro... 30 8.2
AY051822-1|AAK93246.1| 483|Drosophila melanogaster LD33076p pro... 30 8.2
AY005815-1|AAF91072.1| 1678|Drosophila melanogaster arrow protein. 30 8.2
AL022139-2|CAB37430.1| 483|Drosophila melanogaster EG:65F1.2,FB... 30 8.2
AL022139-1|CAA18091.1| 479|Drosophila melanogaster EG:65F1.2,FB... 30 8.2
AF223365-1|AAF28358.1| 1678|Drosophila melanogaster LDL-related ... 30 8.2
AE014298-54|AAX52472.1| 479|Drosophila melanogaster CG4262-PB, ... 30 8.2
AE014298-53|AAF45517.2| 483|Drosophila melanogaster CG4262-PA, ... 30 8.2
AE014297-4130|AAF56715.1| 448|Drosophila melanogaster CG13972-P... 30 8.2
AE013599-1719|AAF58373.2| 1678|Drosophila melanogaster CG5912-PA... 30 8.2
>AY069568-1|AAL39713.1| 513|Drosophila melanogaster LD29830p
protein.
Length = 513
Score = 332 bits (815), Expect = 1e-90
Identities = 173/288 (60%), Positives = 209/288 (72%), Gaps = 6/288 (2%)
Query: 1 MVSGST-RVIQVTNIAPQATKDQMQTLFGYLGKIDDIRLYPTIRDVSCPVQSRICYVKYY 59
M G+T RVIQVTNIAPQATKDQMQTLFG +GKI++IRLYPTIRDVSCPVQSRICYVKY
Sbjct: 1 MAGGNTPRVIQVTNIAPQATKDQMQTLFGNIGKIEEIRLYPTIRDVSCPVQSRICYVKYT 60
Query: 60 DSANVNVAQHMTNTVFIDRALIVIPVQSGEIPDEHKALEMSSNGTLVPGLSSVEPRLPMH 119
D+ +V VAQH+TNTVFIDRALIVIPV + IP+E++ALEM NGT+VPGL + +LP
Sbjct: 61 DTTSVPVAQHLTNTVFIDRALIVIPVLA--IPEEYRALEMLKNGTIVPGLQKPDSKLPPE 118
Query: 120 VINTLDGIPPNQVIQTHDANLTAAGXXXXXXXXXXXDSRKIEEIRRTVLVADT-GSLTSQ 178
VIN ++G P QVI+T+D L D+RKIEEIRRT++V D
Sbjct: 119 VINRIEGQLPQQVIKTYDPKLVEFNLPEYPALPSFYDARKIEEIRRTIIVCDVKNEWRLD 178
Query: 179 QLIDHFCQAGEVKYMRFCSRDVDTLKYALIEMTEQEAVIKALHLNGSTLDGQTIQVYHAT 238
L++ F +AGEVKY R+ +D T Y +IE EQ ++I AL + G G + VYH+T
Sbjct: 179 DLMECFQRAGEVKYARWAEKDNKT--YCMIEFCEQTSIIHALRMQGQEFKGGHLSVYHST 236
Query: 239 QSICKPQTKSNEAAQREIEEAMCRVKEAQNFISAAIDPVIGLLSKDKR 286
SI KP+ KSNEAAQ EIEEAM VKEAQ+ ISAAIDPVIG+L+KDKR
Sbjct: 237 YSITKPEAKSNEAAQAEIEEAMTIVKEAQSMISAAIDPVIGMLAKDKR 284
>AF055719-1|AAC32822.3| 513|Drosophila melanogaster splicing factor
SRp54 protein.
Length = 513
Score = 332 bits (815), Expect = 1e-90
Identities = 173/288 (60%), Positives = 209/288 (72%), Gaps = 6/288 (2%)
Query: 1 MVSGST-RVIQVTNIAPQATKDQMQTLFGYLGKIDDIRLYPTIRDVSCPVQSRICYVKYY 59
M G+T RVIQVTNIAPQATKDQMQTLFG +GKI++IRLYPTIRDVSCPVQSRICYVKY
Sbjct: 1 MAGGNTPRVIQVTNIAPQATKDQMQTLFGNIGKIEEIRLYPTIRDVSCPVQSRICYVKYT 60
Query: 60 DSANVNVAQHMTNTVFIDRALIVIPVQSGEIPDEHKALEMSSNGTLVPGLSSVEPRLPMH 119
D+ +V VAQH+TNTVFIDRALIVIPV + IP+E++ALEM NGT+VPGL + +LP
Sbjct: 61 DTTSVPVAQHLTNTVFIDRALIVIPVLA--IPEEYRALEMLKNGTIVPGLQKPDSKLPPE 118
Query: 120 VINTLDGIPPNQVIQTHDANLTAAGXXXXXXXXXXXDSRKIEEIRRTVLVADT-GSLTSQ 178
VIN ++G P QVI+T+D L D+RKIEEIRRT++V D
Sbjct: 119 VINRIEGQLPQQVIKTYDPKLVEFNLPEYPALPSFYDARKIEEIRRTIIVCDVKNEWRLD 178
Query: 179 QLIDHFCQAGEVKYMRFCSRDVDTLKYALIEMTEQEAVIKALHLNGSTLDGQTIQVYHAT 238
L++ F +AGEVKY R+ +D T Y +IE EQ ++I AL + G G + VYH+T
Sbjct: 179 DLMECFQRAGEVKYARWAEKDNKT--YCMIEFCEQTSIIHALRMQGQEFKGGHLSVYHST 236
Query: 239 QSICKPQTKSNEAAQREIEEAMCRVKEAQNFISAAIDPVIGLLSKDKR 286
SI KP+ KSNEAAQ EIEEAM VKEAQ+ ISAAIDPVIG+L+KDKR
Sbjct: 237 YSITKPEAKSNEAAQAEIEEAMTIVKEAQSMISAAIDPVIGMLAKDKR 284
>AE014134-1720|AAF52825.1| 513|Drosophila melanogaster CG4602-PA
protein.
Length = 513
Score = 332 bits (815), Expect = 1e-90
Identities = 173/288 (60%), Positives = 209/288 (72%), Gaps = 6/288 (2%)
Query: 1 MVSGST-RVIQVTNIAPQATKDQMQTLFGYLGKIDDIRLYPTIRDVSCPVQSRICYVKYY 59
M G+T RVIQVTNIAPQATKDQMQTLFG +GKI++IRLYPTIRDVSCPVQSRICYVKY
Sbjct: 1 MAGGNTPRVIQVTNIAPQATKDQMQTLFGNIGKIEEIRLYPTIRDVSCPVQSRICYVKYT 60
Query: 60 DSANVNVAQHMTNTVFIDRALIVIPVQSGEIPDEHKALEMSSNGTLVPGLSSVEPRLPMH 119
D+ +V VAQH+TNTVFIDRALIVIPV + IP+E++ALEM NGT+VPGL + +LP
Sbjct: 61 DTTSVPVAQHLTNTVFIDRALIVIPVLA--IPEEYRALEMLKNGTIVPGLQKPDSKLPPE 118
Query: 120 VINTLDGIPPNQVIQTHDANLTAAGXXXXXXXXXXXDSRKIEEIRRTVLVADT-GSLTSQ 178
VIN ++G P QVI+T+D L D+RKIEEIRRT++V D
Sbjct: 119 VINRIEGQLPQQVIKTYDPKLVEFNLPEYPALPSFYDARKIEEIRRTIIVCDVKNEWRLD 178
Query: 179 QLIDHFCQAGEVKYMRFCSRDVDTLKYALIEMTEQEAVIKALHLNGSTLDGQTIQVYHAT 238
L++ F +AGEVKY R+ +D T Y +IE EQ ++I AL + G G + VYH+T
Sbjct: 179 DLMECFQRAGEVKYARWAEKDNKT--YCMIEFCEQTSIIHALRMQGQEFKGGHLSVYHST 236
Query: 239 QSICKPQTKSNEAAQREIEEAMCRVKEAQNFISAAIDPVIGLLSKDKR 286
SI KP+ KSNEAAQ EIEEAM VKEAQ+ ISAAIDPVIG+L+KDKR
Sbjct: 237 YSITKPEAKSNEAAQAEIEEAMTIVKEAQSMISAAIDPVIGMLAKDKR 284
>AY118842-1|AAM50702.1| 435|Drosophila melanogaster GM13065p
protein.
Length = 435
Score = 35.5 bits (78), Expect = 0.22
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
Query: 161 EEIRRTVLVADTG-SLTSQQLIDHFCQAGEVKYMRFCSRDVD--TLKYALIEMTEQEAVI 217
++ +RT+ V S T +QL + F GE+ Y+R C +D D A + + +AV
Sbjct: 256 KDAKRTIFVGSLKYSATEEQLREIFSSCGEIDYIR-CLQDGDKGCKGVAYVCFQKPDAVG 314
Query: 218 KALHLNGSTLDGQTIQV 234
AL LN + LD + I V
Sbjct: 315 LALELNQTLLDDRPINV 331
>AE014134-2808|AAF53587.1| 435|Drosophila melanogaster CG12288-PA
protein.
Length = 435
Score = 35.5 bits (78), Expect = 0.22
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
Query: 161 EEIRRTVLVADTG-SLTSQQLIDHFCQAGEVKYMRFCSRDVD--TLKYALIEMTEQEAVI 217
++ +RT+ V S T +QL + F GE+ Y+R C +D D A + + +AV
Sbjct: 256 KDAKRTIFVGSLKYSATEEQLREIFSSCGEIDYIR-CLQDGDKGCKGVAYVCFQKPDAVG 314
Query: 218 KALHLNGSTLDGQTIQV 234
AL LN + LD + I V
Sbjct: 315 LALELNQTLLDDRPINV 331
>AY071005-1|AAL48627.1| 165|Drosophila melanogaster RE09075p
protein.
Length = 165
Score = 34.7 bits (76), Expect = 0.38
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Query: 179 QLIDHFCQAGEVK--YMRFCSRDVDTLKYALIEM-TEQEAVIKALHLNGSTLDGQTIQV 234
++ + FC GE+K ++ R + YAL+E T ++A+ LNG+ + GQTIQV
Sbjct: 88 EIQEKFCDYGEIKSIHLNLDRRTGFSKGYALVEYETHKQALAAKEALNGAEIMGQTIQV 146
>AE013599-786|AAF58987.1| 165|Drosophila melanogaster CG8781-PA
protein.
Length = 165
Score = 34.7 bits (76), Expect = 0.38
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Query: 179 QLIDHFCQAGEVK--YMRFCSRDVDTLKYALIEM-TEQEAVIKALHLNGSTLDGQTIQV 234
++ + FC GE+K ++ R + YAL+E T ++A+ LNG+ + GQTIQV
Sbjct: 88 EIQEKFCDYGEIKNIHLNLDRRTGFSKGYALVEYETHKQALAAKEALNGAEIMGQTIQV 146
>AY118772-1|AAM50632.1| 430|Drosophila melanogaster GH11495p
protein.
Length = 430
Score = 33.5 bits (73), Expect = 0.88
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 4/59 (6%)
Query: 176 TSQQLIDHFCQAGEVKYMRFCSRDVDTLKYALIEMTEQEAVIKALHLNGSTLDGQTIQV 234
T Q L D F + G+VK+ DV +++ E++A + ++GS LDG+ I+V
Sbjct: 373 TWQTLRDKFREIGDVKFAEIRGNDVGVVRF----FKERDAELAIALMDGSRLDGRNIKV 427
>AY089603-1|AAL90341.1| 121|Drosophila melanogaster RE19804p
protein.
Length = 121
Score = 33.5 bits (73), Expect = 0.88
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 7/84 (8%)
Query: 7 RVIQVTNIAPQATKDQMQTLFGYLGKIDDIRLYPTIRDVSCPVQSRICYVKYYDSANV-N 65
R++ V N+ + T D+M +FG G I IR+ T P +V Y D + N
Sbjct: 15 RLLYVRNLPYKITSDEMYDIFGKFGAIRQIRVGNT------PETRGTAFVVYEDIFDAKN 68
Query: 66 VAQHMTNTVFIDRALIVIPVQSGE 89
H++ +R L+V+ QS +
Sbjct: 69 ACDHLSGFNVCNRYLVVLYYQSNK 92
>AE014297-952|AAF54387.1| 632|Drosophila melanogaster CG9373-PA
protein.
Length = 632
Score = 33.5 bits (73), Expect = 0.88
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 4/59 (6%)
Query: 176 TSQQLIDHFCQAGEVKYMRFCSRDVDTLKYALIEMTEQEAVIKALHLNGSTLDGQTIQV 234
T Q L D F + G+VK+ DV +++ E++A + ++GS LDG+ I+V
Sbjct: 575 TWQTLRDKFREIGDVKFAEIRGNDVGVVRF----FKERDAELAIALMDGSRLDGRNIKV 629
>AE014296-1096|AAF50675.1| 121|Drosophila melanogaster CG13298-PA
protein.
Length = 121
Score = 33.5 bits (73), Expect = 0.88
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 7/84 (8%)
Query: 7 RVIQVTNIAPQATKDQMQTLFGYLGKIDDIRLYPTIRDVSCPVQSRICYVKYYDSANV-N 65
R++ V N+ + T D+M +FG G I IR+ T P +V Y D + N
Sbjct: 15 RLLYVRNLPYKITSDEMYDIFGKFGAIRQIRVGNT------PETRGTAFVVYEDIFDAKN 68
Query: 66 VAQHMTNTVFIDRALIVIPVQSGE 89
H++ +R L+V+ QS +
Sbjct: 69 ACDHLSGFNVCNRYLVVLYYQSNK 92
>M59448-1|AAA28921.1| 366|Drosophila melanogaster Sxl protein.
Length = 366
Score = 33.1 bits (72), Expect = 1.2
Identities = 28/113 (24%), Positives = 45/113 (39%), Gaps = 4/113 (3%)
Query: 9 IQVTNIAPQATKDQMQTLFGYLGKIDDIRLYPTIRDVSCPVQSRICYVKYYDSANVNVAQ 68
+ VTN+ T DQ+ T+FG G I + +RD + +V+Y A
Sbjct: 205 LYVTNLPRTITDDQLDTIFGKYGSIVQKNI---LRDKLTGRPRGVAFVRYNKREEAQEAI 261
Query: 69 HMTNTVFIDRALIVIPVQSGEIPDEHKALE-MSSNGTLVPGLSSVEPRLPMHV 120
N V + + V+ E + KA MS G + + P+ P H+
Sbjct: 262 SALNNVIPEGGSQPLSVRLAEEHGKAKAAHFMSQMGVVPANVPPPPPQPPAHM 314
>M59447-1|AAA28922.1| 354|Drosophila melanogaster Sx1 protein.
Length = 354
Score = 33.1 bits (72), Expect = 1.2
Identities = 28/113 (24%), Positives = 45/113 (39%), Gaps = 4/113 (3%)
Query: 9 IQVTNIAPQATKDQMQTLFGYLGKIDDIRLYPTIRDVSCPVQSRICYVKYYDSANVNVAQ 68
+ VTN+ T DQ+ T+FG G I + +RD + +V+Y A
Sbjct: 213 LYVTNLPRTITDDQLDTIFGKYGSIVQKNI---LRDKLTGRPRGVAFVRYNKREEAQEAI 269
Query: 69 HMTNTVFIDRALIVIPVQSGEIPDEHKALE-MSSNGTLVPGLSSVEPRLPMHV 120
N V + + V+ E + KA MS G + + P+ P H+
Sbjct: 270 SALNNVIPEGGSQPLSVRLAEEHGKAKAAHFMSQMGVVPANVPPPPPQPPAHM 322
>M23636-1|AAA28884.1| 354|Drosophila melanogaster sex-linked
protein protein.
Length = 354
Score = 33.1 bits (72), Expect = 1.2
Identities = 28/113 (24%), Positives = 45/113 (39%), Gaps = 4/113 (3%)
Query: 9 IQVTNIAPQATKDQMQTLFGYLGKIDDIRLYPTIRDVSCPVQSRICYVKYYDSANVNVAQ 68
+ VTN+ T DQ+ T+FG G I + +RD + +V+Y A
Sbjct: 213 LYVTNLPRTITDDQLDTIFGKYGSIVQKNI---LRDKLTGRPRGVAFVRYNKREEAQEAI 269
Query: 69 HMTNTVFIDRALIVIPVQSGEIPDEHKALE-MSSNGTLVPGLSSVEPRLPMHV 120
N V + + V+ E + KA MS G + + P+ P H+
Sbjct: 270 SALNNVIPEGGSQPLSVRLAEEHGKAKAAHFMSQMGVVPANVPPPPPQPPAHM 322
>BT003583-1|AAO39587.1| 352|Drosophila melanogaster LD15933p
protein.
Length = 352
Score = 33.1 bits (72), Expect = 1.2
Identities = 28/113 (24%), Positives = 45/113 (39%), Gaps = 4/113 (3%)
Query: 9 IQVTNIAPQATKDQMQTLFGYLGKIDDIRLYPTIRDVSCPVQSRICYVKYYDSANVNVAQ 68
+ VTN+ T DQ+ T+FG G I + +RD + +V+Y A
Sbjct: 213 LYVTNLPRTITDDQLDTIFGKYGSIVQKNI---LRDKLTGRPRGVAFVRYNKREEAQEAI 269
Query: 69 HMTNTVFIDRALIVIPVQSGEIPDEHKALE-MSSNGTLVPGLSSVEPRLPMHV 120
N V + + V+ E + KA MS G + + P+ P H+
Sbjct: 270 SALNNVIPEGGSQPLSVRLAEEHGKAKAAHFMSQMGVVPANVPPPPPQPPAHM 322
>AE014298-1011|AAZ52512.1| 314|Drosophila melanogaster CG18350-PE,
isoform E protein.
Length = 314
Score = 33.1 bits (72), Expect = 1.2
Identities = 28/113 (24%), Positives = 45/113 (39%), Gaps = 4/113 (3%)
Query: 9 IQVTNIAPQATKDQMQTLFGYLGKIDDIRLYPTIRDVSCPVQSRICYVKYYDSANVNVAQ 68
+ VTN+ T DQ+ T+FG G I + +RD + +V+Y A
Sbjct: 173 LYVTNLPRTITDDQLDTIFGKYGSIVQKNI---LRDKLTGRPRGVAFVRYNKREEAQEAI 229
Query: 69 HMTNTVFIDRALIVIPVQSGEIPDEHKALE-MSSNGTLVPGLSSVEPRLPMHV 120
N V + + V+ E + KA MS G + + P+ P H+
Sbjct: 230 SALNNVIPEGGSQPLSVRLAEEHGKAKAAHFMSQMGVVPANVPPPPPQPPAHM 282
>AE014298-1010|AAO41638.2| 314|Drosophila melanogaster CG18350-PA,
isoform A protein.
Length = 314
Score = 33.1 bits (72), Expect = 1.2
Identities = 28/113 (24%), Positives = 45/113 (39%), Gaps = 4/113 (3%)
Query: 9 IQVTNIAPQATKDQMQTLFGYLGKIDDIRLYPTIRDVSCPVQSRICYVKYYDSANVNVAQ 68
+ VTN+ T DQ+ T+FG G I + +RD + +V+Y A
Sbjct: 173 LYVTNLPRTITDDQLDTIFGKYGSIVQKNI---LRDKLTGRPRGVAFVRYNKREEAQEAI 229
Query: 69 HMTNTVFIDRALIVIPVQSGEIPDEHKALE-MSSNGTLVPGLSSVEPRLPMHV 120
N V + + V+ E + KA MS G + + P+ P H+
Sbjct: 230 SALNNVIPEGGSQPLSVRLAEEHGKAKAAHFMSQMGVVPANVPPPPPQPPAHM 282
>AE014298-1009|AAF46241.3| 339|Drosophila melanogaster CG18350-PI,
isoform I protein.
Length = 339
Score = 33.1 bits (72), Expect = 1.2
Identities = 28/113 (24%), Positives = 45/113 (39%), Gaps = 4/113 (3%)
Query: 9 IQVTNIAPQATKDQMQTLFGYLGKIDDIRLYPTIRDVSCPVQSRICYVKYYDSANVNVAQ 68
+ VTN+ T DQ+ T+FG G I + +RD + +V+Y A
Sbjct: 198 LYVTNLPRTITDDQLDTIFGKYGSIVQKNI---LRDKLTGRPRGVAFVRYNKREEAQEAI 254
Query: 69 HMTNTVFIDRALIVIPVQSGEIPDEHKALE-MSSNGTLVPGLSSVEPRLPMHV 120
N V + + V+ E + KA MS G + + P+ P H+
Sbjct: 255 SALNNVIPEGGSQPLSVRLAEEHGKAKAAHFMSQMGVVPANVPPPPPQPPAHM 307
>AE014298-1008|AAZ52511.1| 354|Drosophila melanogaster CG18350-PL,
isoform L protein.
Length = 354
Score = 33.1 bits (72), Expect = 1.2
Identities = 28/113 (24%), Positives = 45/113 (39%), Gaps = 4/113 (3%)
Query: 9 IQVTNIAPQATKDQMQTLFGYLGKIDDIRLYPTIRDVSCPVQSRICYVKYYDSANVNVAQ 68
+ VTN+ T DQ+ T+FG G I + +RD + +V+Y A
Sbjct: 213 LYVTNLPRTITDDQLDTIFGKYGSIVQKNI---LRDKLTGRPRGVAFVRYNKREEAQEAI 269
Query: 69 HMTNTVFIDRALIVIPVQSGEIPDEHKALE-MSSNGTLVPGLSSVEPRLPMHV 120
N V + + V+ E + KA MS G + + P+ P H+
Sbjct: 270 SALNNVIPEGGSQPLSVRLAEEHGKAKAAHFMSQMGVVPANVPPPPPQPPAHM 322
>AE014298-1007|AAG22410.1| 354|Drosophila melanogaster CG18350-PD,
isoform D protein.
Length = 354
Score = 33.1 bits (72), Expect = 1.2
Identities = 28/113 (24%), Positives = 45/113 (39%), Gaps = 4/113 (3%)
Query: 9 IQVTNIAPQATKDQMQTLFGYLGKIDDIRLYPTIRDVSCPVQSRICYVKYYDSANVNVAQ 68
+ VTN+ T DQ+ T+FG G I + +RD + +V+Y A
Sbjct: 213 LYVTNLPRTITDDQLDTIFGKYGSIVQKNI---LRDKLTGRPRGVAFVRYNKREEAQEAI 269
Query: 69 HMTNTVFIDRALIVIPVQSGEIPDEHKALE-MSSNGTLVPGLSSVEPRLPMHV 120
N V + + V+ E + KA MS G + + P+ P H+
Sbjct: 270 SALNNVIPEGGSQPLSVRLAEEHGKAKAAHFMSQMGVVPANVPPPPPQPPAHM 322
>AE014298-1006|AAN09198.1| 346|Drosophila melanogaster CG18350-PJ,
isoform J protein.
Length = 346
Score = 33.1 bits (72), Expect = 1.2
Identities = 28/113 (24%), Positives = 45/113 (39%), Gaps = 4/113 (3%)
Query: 9 IQVTNIAPQATKDQMQTLFGYLGKIDDIRLYPTIRDVSCPVQSRICYVKYYDSANVNVAQ 68
+ VTN+ T DQ+ T+FG G I + +RD + +V+Y A
Sbjct: 205 LYVTNLPRTITDDQLDTIFGKYGSIVQKNI---LRDKLTGRPRGVAFVRYNKREEAQEAI 261
Query: 69 HMTNTVFIDRALIVIPVQSGEIPDEHKALE-MSSNGTLVPGLSSVEPRLPMHV 120
N V + + V+ E + KA MS G + + P+ P H+
Sbjct: 262 SALNNVIPEGGSQPLSVRLAEEHGKAKAAHFMSQMGVVPANVPPPPPQPPAHM 314
>AE014298-1005|AAN09200.2| 346|Drosophila melanogaster CG18350-PG,
isoform G protein.
Length = 346
Score = 33.1 bits (72), Expect = 1.2
Identities = 28/113 (24%), Positives = 45/113 (39%), Gaps = 4/113 (3%)
Query: 9 IQVTNIAPQATKDQMQTLFGYLGKIDDIRLYPTIRDVSCPVQSRICYVKYYDSANVNVAQ 68
+ VTN+ T DQ+ T+FG G I + +RD + +V+Y A
Sbjct: 205 LYVTNLPRTITDDQLDTIFGKYGSIVQKNI---LRDKLTGRPRGVAFVRYNKREEAQEAI 261
Query: 69 HMTNTVFIDRALIVIPVQSGEIPDEHKALE-MSSNGTLVPGLSSVEPRLPMHV 120
N V + + V+ E + KA MS G + + P+ P H+
Sbjct: 262 SALNNVIPEGGSQPLSVRLAEEHGKAKAAHFMSQMGVVPANVPPPPPQPPAHM 314
>AE014298-1004|AAZ52510.1| 344|Drosophila melanogaster CG18350-PN,
isoform N protein.
Length = 344
Score = 33.1 bits (72), Expect = 1.2
Identities = 28/113 (24%), Positives = 45/113 (39%), Gaps = 4/113 (3%)
Query: 9 IQVTNIAPQATKDQMQTLFGYLGKIDDIRLYPTIRDVSCPVQSRICYVKYYDSANVNVAQ 68
+ VTN+ T DQ+ T+FG G I + +RD + +V+Y A
Sbjct: 203 LYVTNLPRTITDDQLDTIFGKYGSIVQKNI---LRDKLTGRPRGVAFVRYNKREEAQEAI 259
Query: 69 HMTNTVFIDRALIVIPVQSGEIPDEHKALE-MSSNGTLVPGLSSVEPRLPMHV 120
N V + + V+ E + KA MS G + + P+ P H+
Sbjct: 260 SALNNVIPEGGSQPLSVRLAEEHGKAKAAHFMSQMGVVPANVPPPPPQPPAHM 312
>AE014298-1003|AAN09197.1| 344|Drosophila melanogaster CG18350-PC,
isoform C protein.
Length = 344
Score = 33.1 bits (72), Expect = 1.2
Identities = 28/113 (24%), Positives = 45/113 (39%), Gaps = 4/113 (3%)
Query: 9 IQVTNIAPQATKDQMQTLFGYLGKIDDIRLYPTIRDVSCPVQSRICYVKYYDSANVNVAQ 68
+ VTN+ T DQ+ T+FG G I + +RD + +V+Y A
Sbjct: 203 LYVTNLPRTITDDQLDTIFGKYGSIVQKNI---LRDKLTGRPRGVAFVRYNKREEAQEAI 259
Query: 69 HMTNTVFIDRALIVIPVQSGEIPDEHKALE-MSSNGTLVPGLSSVEPRLPMHV 120
N V + + V+ E + KA MS G + + P+ P H+
Sbjct: 260 SALNNVIPEGGSQPLSVRLAEEHGKAKAAHFMSQMGVVPANVPPPPPQPPAHM 312
>AE014298-1002|AAF46240.2| 366|Drosophila melanogaster CG18350-PH,
isoform H protein.
Length = 366
Score = 33.1 bits (72), Expect = 1.2
Identities = 28/113 (24%), Positives = 45/113 (39%), Gaps = 4/113 (3%)
Query: 9 IQVTNIAPQATKDQMQTLFGYLGKIDDIRLYPTIRDVSCPVQSRICYVKYYDSANVNVAQ 68
+ VTN+ T DQ+ T+FG G I + +RD + +V+Y A
Sbjct: 205 LYVTNLPRTITDDQLDTIFGKYGSIVQKNI---LRDKLTGRPRGVAFVRYNKREEAQEAI 261
Query: 69 HMTNTVFIDRALIVIPVQSGEIPDEHKALE-MSSNGTLVPGLSSVEPRLPMHV 120
N V + + V+ E + KA MS G + + P+ P H+
Sbjct: 262 SALNNVIPEGGSQPLSVRLAEEHGKAKAAHFMSQMGVVPANVPPPPPQPPAHM 314
>AE014298-1001|AAZ52509.1| 364|Drosophila melanogaster CG18350-PO,
isoform O protein.
Length = 364
Score = 33.1 bits (72), Expect = 1.2
Identities = 28/113 (24%), Positives = 45/113 (39%), Gaps = 4/113 (3%)
Query: 9 IQVTNIAPQATKDQMQTLFGYLGKIDDIRLYPTIRDVSCPVQSRICYVKYYDSANVNVAQ 68
+ VTN+ T DQ+ T+FG G I + +RD + +V+Y A
Sbjct: 203 LYVTNLPRTITDDQLDTIFGKYGSIVQKNI---LRDKLTGRPRGVAFVRYNKREEAQEAI 259
Query: 69 HMTNTVFIDRALIVIPVQSGEIPDEHKALE-MSSNGTLVPGLSSVEPRLPMHV 120
N V + + V+ E + KA MS G + + P+ P H+
Sbjct: 260 SALNNVIPEGGSQPLSVRLAEEHGKAKAAHFMSQMGVVPANVPPPPPQPPAHM 312
>AF173550-1|AAL29185.1| 165|Drosophila melanogaster Tsunagi
protein.
Length = 165
Score = 32.3 bits (70), Expect = 2.0
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 179 QLIDHFCQAGEVK--YMRFCSRDVDTLKYALIEM-TEQEAVIKALHLNGSTLDGQTIQV 234
++ + FC GE+K ++ R + YAL+E T ++A+ L G+ + GQTIQV
Sbjct: 88 EIQEKFCDYGEIKNIHLNLDRRTGFSKGYALVEYETHKQALAAKEALRGAEIMGQTIQV 146
>AY070578-1|AAL48049.1| 154|Drosophila melanogaster RE12122p
protein.
Length = 154
Score = 30.7 bits (66), Expect = 6.2
Identities = 20/80 (25%), Positives = 34/80 (42%), Gaps = 3/80 (3%)
Query: 9 IQVTNIAPQATKDQMQTLFGYLGKIDDIRLYPTIRDVSCPVQSRICYVKYYDSANVNVAQ 68
+ V N++ T++Q+ LF G D+R+ D C+V+YY + A
Sbjct: 32 LYVGNLSFYTTEEQIHELFSRCG---DVRVIVMGLDKYKKTPCGFCFVEYYVRSEAEAAM 88
Query: 69 HMTNTVFIDRALIVIPVQSG 88
N +D LI + +G
Sbjct: 89 RFVNGTRLDDRLIRVDWDAG 108
>AY051860-1|AAK93284.1| 594|Drosophila melanogaster LD35730p
protein.
Length = 594
Score = 30.7 bits (66), Expect = 6.2
Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 3/79 (3%)
Query: 161 EEIRRTVLVADTGS-LTSQQLIDHFCQAGEVKYMRF--CSRDVDTLKYALIEMTEQEAVI 217
E RTV + ++ L + F G+V+ +R C++ A IE + E+V
Sbjct: 233 ERDARTVFCIQLSQRVRARDLEEFFSSVGKVRDVRLITCNKTKRFKGIAYIEFDDPESVA 292
Query: 218 KALHLNGSTLDGQTIQVYH 236
AL L+G L G I V H
Sbjct: 293 LALGLSGQRLLGVPIMVQH 311
>AJ238969-1|CAB53185.1| 154|Drosophila melanogaster cap binding
protein 20 protein.
Length = 154
Score = 30.7 bits (66), Expect = 6.2
Identities = 20/80 (25%), Positives = 34/80 (42%), Gaps = 3/80 (3%)
Query: 9 IQVTNIAPQATKDQMQTLFGYLGKIDDIRLYPTIRDVSCPVQSRICYVKYYDSANVNVAQ 68
+ V N++ T++Q+ LF G D+R+ D C+V+YY + A
Sbjct: 32 LYVGNLSFYTTEEQIHELFSRCG---DVRVIVMGLDKYKKTPCGFCFVEYYVRSEAEAAM 88
Query: 69 HMTNTVFIDRALIVIPVQSG 88
N +D LI + +G
Sbjct: 89 RFVNGTRLDDRLIRVDWDAG 108
>AE014297-2442|AAF55496.1| 154|Drosophila melanogaster CG12357-PA
protein.
Length = 154
Score = 30.7 bits (66), Expect = 6.2
Identities = 20/80 (25%), Positives = 34/80 (42%), Gaps = 3/80 (3%)
Query: 9 IQVTNIAPQATKDQMQTLFGYLGKIDDIRLYPTIRDVSCPVQSRICYVKYYDSANVNVAQ 68
+ V N++ T++Q+ LF G D+R+ D C+V+YY + A
Sbjct: 32 LYVGNLSFYTTEEQIHELFSRCG---DVRVIVMGLDKYKKTPCGFCFVEYYVRSEAEAAM 88
Query: 69 HMTNTVFIDRALIVIPVQSG 88
N +D LI + +G
Sbjct: 89 RFVNGTRLDDRLIRVDWDAG 108
>AE014134-1223|AAN10614.1| 594|Drosophila melanogaster CG11266-PB,
isoform B protein.
Length = 594
Score = 30.7 bits (66), Expect = 6.2
Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 3/79 (3%)
Query: 161 EEIRRTVLVADTGS-LTSQQLIDHFCQAGEVKYMRF--CSRDVDTLKYALIEMTEQEAVI 217
E RTV + ++ L + F G+V+ +R C++ A IE + E+V
Sbjct: 233 ERDARTVFCIQLSQRVRARDLEEFFSSVGKVRDVRLITCNKTKRFKGIAYIEFDDPESVA 292
Query: 218 KALHLNGSTLDGQTIQVYH 236
AL L+G L G I V H
Sbjct: 293 LALGLSGQRLLGVPIMVQH 311
>AE014134-1222|AAF52478.1| 594|Drosophila melanogaster CG11266-PA,
isoform A protein.
Length = 594
Score = 30.7 bits (66), Expect = 6.2
Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 3/79 (3%)
Query: 161 EEIRRTVLVADTGS-LTSQQLIDHFCQAGEVKYMRF--CSRDVDTLKYALIEMTEQEAVI 217
E RTV + ++ L + F G+V+ +R C++ A IE + E+V
Sbjct: 233 ERDARTVFCIQLSQRVRARDLEEFFSSVGKVRDVRLITCNKTKRFKGIAYIEFDDPESVA 292
Query: 218 KALHLNGSTLDGQTIQVYH 236
AL L+G L G I V H
Sbjct: 293 LALGLSGQRLLGVPIMVQH 311
>AE013599-3954|AAF47270.1| 250|Drosophila melanogaster CG3594-PA
protein.
Length = 250
Score = 30.7 bits (66), Expect = 6.2
Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 2/87 (2%)
Query: 176 TSQQLIDHFCQAGEVKYMRFCSRDVDTLKYALIEMTEQEAVIKALHLNGSTLDGQTIQVY 235
T L HF AG VK +R + +A +EM + + A L+ + L G+ I+V
Sbjct: 126 TKDDLELHFSAAGTVKSIRIPKKRRGG--FAFVEMADLSSFQNAFQLHNTELQGRNIKVQ 183
Query: 236 HATQSICKPQTKSNEAAQREIEEAMCR 262
+ K K N Q+ + A R
Sbjct: 184 ISEAGKKKSANKKNIIKQKNRKLAEMR 210
>M21152-1|AAA28506.1| 483|Drosophila melanogaster elav protein.
Length = 483
Score = 30.3 bits (65), Expect = 8.2
Identities = 17/45 (37%), Positives = 28/45 (62%), Gaps = 4/45 (8%)
Query: 3 SGSTRVIQVTNIAPQA-TKDQMQTLFGYLGKIDDIRLYPTIRDVS 46
S TR + N PQ T+D++++LF +G+I+ ++L IRD S
Sbjct: 144 STETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKL---IRDKS 185
>BT015250-1|AAT94479.1| 1246|Drosophila melanogaster LP19005p
protein.
Length = 1246
Score = 30.3 bits (65), Expect = 8.2
Identities = 15/50 (30%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 192 YMRFCSRDVDTLKYALIEMTEQEAVIK-ALHLNGSTLDGQTIQVYHATQS 240
YM + D+++ A ++ ++ + ++ A H G T D +T ++Y ATQS
Sbjct: 840 YMYWTESPTDSIRRAAMDGSDLQTIVAGANHAAGLTFDQETRRLYWATQS 889
>AY051822-1|AAK93246.1| 483|Drosophila melanogaster LD33076p
protein.
Length = 483
Score = 30.3 bits (65), Expect = 8.2
Identities = 17/45 (37%), Positives = 28/45 (62%), Gaps = 4/45 (8%)
Query: 3 SGSTRVIQVTNIAPQA-TKDQMQTLFGYLGKIDDIRLYPTIRDVS 46
S TR + N PQ T+D++++LF +G+I+ ++L IRD S
Sbjct: 144 STETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKL---IRDKS 185
>AY005815-1|AAF91072.1| 1678|Drosophila melanogaster arrow protein.
Length = 1678
Score = 30.3 bits (65), Expect = 8.2
Identities = 15/50 (30%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 192 YMRFCSRDVDTLKYALIEMTEQEAVIK-ALHLNGSTLDGQTIQVYHATQS 240
YM + D+++ A ++ ++ + ++ A H G T D +T ++Y ATQS
Sbjct: 840 YMYWTESPTDSIRRAAMDGSDLQTIVAGANHAAGLTFDQETRRLYWATQS 889
>AL022139-2|CAB37430.1| 483|Drosophila melanogaster
EG:65F1.2,FBgn0000570;elav protein.
Length = 483
Score = 30.3 bits (65), Expect = 8.2
Identities = 17/45 (37%), Positives = 28/45 (62%), Gaps = 4/45 (8%)
Query: 3 SGSTRVIQVTNIAPQA-TKDQMQTLFGYLGKIDDIRLYPTIRDVS 46
S TR + N PQ T+D++++LF +G+I+ ++L IRD S
Sbjct: 144 STETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKL---IRDKS 185
>AL022139-1|CAA18091.1| 479|Drosophila melanogaster
EG:65F1.2,FBgn0000570;elav protein.
Length = 479
Score = 30.3 bits (65), Expect = 8.2
Identities = 17/45 (37%), Positives = 28/45 (62%), Gaps = 4/45 (8%)
Query: 3 SGSTRVIQVTNIAPQA-TKDQMQTLFGYLGKIDDIRLYPTIRDVS 46
S TR + N PQ T+D++++LF +G+I+ ++L IRD S
Sbjct: 140 STETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKL---IRDKS 181
>AF223365-1|AAF28358.1| 1678|Drosophila melanogaster LDL-related
protein LRP6 protein.
Length = 1678
Score = 30.3 bits (65), Expect = 8.2
Identities = 15/50 (30%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 192 YMRFCSRDVDTLKYALIEMTEQEAVIK-ALHLNGSTLDGQTIQVYHATQS 240
YM + D+++ A ++ ++ + ++ A H G T D +T ++Y ATQS
Sbjct: 840 YMYWTESPTDSIRRAAMDGSDLQTIVAGANHAAGLTFDQETRRLYWATQS 889
>AE014298-54|AAX52472.1| 479|Drosophila melanogaster CG4262-PB,
isoform B protein.
Length = 479
Score = 30.3 bits (65), Expect = 8.2
Identities = 17/45 (37%), Positives = 28/45 (62%), Gaps = 4/45 (8%)
Query: 3 SGSTRVIQVTNIAPQA-TKDQMQTLFGYLGKIDDIRLYPTIRDVS 46
S TR + N PQ T+D++++LF +G+I+ ++L IRD S
Sbjct: 140 STETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKL---IRDKS 181
>AE014298-53|AAF45517.2| 483|Drosophila melanogaster CG4262-PA,
isoform A protein.
Length = 483
Score = 30.3 bits (65), Expect = 8.2
Identities = 17/45 (37%), Positives = 28/45 (62%), Gaps = 4/45 (8%)
Query: 3 SGSTRVIQVTNIAPQA-TKDQMQTLFGYLGKIDDIRLYPTIRDVS 46
S TR + N PQ T+D++++LF +G+I+ ++L IRD S
Sbjct: 144 STETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKL---IRDKS 185
>AE014297-4130|AAF56715.1| 448|Drosophila melanogaster CG13972-PA
protein.
Length = 448
Score = 30.3 bits (65), Expect = 8.2
Identities = 23/96 (23%), Positives = 42/96 (43%), Gaps = 3/96 (3%)
Query: 175 LTSQQLIDHFCQAGEVKYMRFCSRDVDTLKYALIEMTEQEAVIKALHLNGSTLDGQTIQV 234
+T ++L D + + KY C V+ L+Y+L++ E+ + + + +
Sbjct: 254 VTKEKLQDLEERIADTKYKLRCVSRVNDLEYSLVQRWEEGRLAQGTIWGENAERAYLRDI 313
Query: 235 YHATQSICKPQTKSNEA---AQREIEEAMCRVKEAQ 267
Q + + + S E QREI E R+KE Q
Sbjct: 314 LDIKQKLAREERVSAELRSFRQREILELQARIKEWQ 349
>AE013599-1719|AAF58373.2| 1678|Drosophila melanogaster CG5912-PA
protein.
Length = 1678
Score = 30.3 bits (65), Expect = 8.2
Identities = 15/50 (30%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 192 YMRFCSRDVDTLKYALIEMTEQEAVIK-ALHLNGSTLDGQTIQVYHATQS 240
YM + D+++ A ++ ++ + ++ A H G T D +T ++Y ATQS
Sbjct: 840 YMYWTESPTDSIRRAAMDGSDLQTIVAGANHAAGLTFDQETRRLYWATQS 889
Database: fruitfly
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 24,830,863
Number of sequences in database: 52,641
Lambda K H
0.313 0.130 0.371
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,669,723
Number of Sequences: 52641
Number of extensions: 683947
Number of successful extensions: 1862
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 42
Number of HSP's that attempted gapping in prelim test: 1842
Number of HSP's gapped (non-prelim): 58
length of query: 619
length of database: 24,830,863
effective HSP length: 89
effective length of query: 530
effective length of database: 20,145,814
effective search space: 10677281420
effective search space used: 10677281420
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 65 (30.3 bits)
- SilkBase 1999-2023 -