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Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001869-TA|BGIBMGA001869-PA|IPR013602|Dynein heavy chain,
N-terminal region 2, IPR011704|ATPase associated with various cellular
activities, AAA-5, IPR004273|Dynein heavy chain
         (3796 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain |Schizosaccha...   246   4e-65
SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr 1||...    33   0.59 
SPAC1565.04c |ste4||adaptor protein Ste4|Schizosaccharomyces pom...    33   1.0  
SPAC343.15 |||tRNA isopentenyltransferase|Schizosaccharomyces po...    32   1.4  
SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyce...    32   1.4  
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy...    32   1.8  
SPBC1539.05 |cog3||Golgi transport complex subunit Cog3 |Schizos...    31   3.2  
SPAC9E9.08 |rad26||ATRIP|Schizosaccharomyces pombe|chr 1|||Manual      31   4.2  
SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces...    31   4.2  
SPBP16F5.02 |mcs2||cyclin Mcs2|Schizosaccharomyces pombe|chr 2||...    31   4.2  
SPBC839.03c |||neddylation protein Dcn1|Schizosaccharomyces pomb...    31   4.2  
SPCC24B10.19c |||sequence orphan|Schizosaccharomyces pombe|chr 3...    31   4.2  
SPAC31G5.14 |gcv1|n313|glycine decarboxylase T subunit|Schizosac...    30   5.5  
SPAC458.02c |||mRNP complex |Schizosaccharomyces pombe|chr 1|||M...    30   5.5  
SPBP8B7.09c |||karyopherin|Schizosaccharomyces pombe|chr 2|||Manual    30   7.3  
SPBPJ4664.06 |gpt1||UDP-glucose-glycoprotein glucosyltransferase...    29   9.6  
SPCC1795.06 |map2||P-factor |Schizosaccharomyces pombe|chr 3|||M...    29   9.6  
SPCC622.13c |||conserved eukaryotic protein|Schizosaccharomyces ...    29   9.6  
SPBC3F6.04c |||U3 snoRNP protein Nop14 |Schizosaccharomyces pomb...    29   9.6  

>SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain
            |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 4196

 Score =  246 bits (603), Expect = 4e-65
 Identities = 207/789 (26%), Positives = 354/789 (44%), Gaps = 85/789 (10%)

Query: 883  WGKVQSQWLYLLPIFSSKDIVAQM-PEEGVMFVEVNNIYRRYMGSVDKDPHVLEIAGGTG 941
            W ++Q  W +L  IF     + Q+ PE    F   +  Y   +  + +  ++ +++    
Sbjct: 1535 WKEIQQIWTHLSAIFYESTYIQQLLPELAASFFNSSKTYMHLVTLLKERSYLYKVSNIPS 1594

Query: 942  ILEAFRAATAFLEKINDGVNNYLEKKRLYFPRFFFLSNDEMLEILSETKNPLKVQPHLKK 1001
            +LE+    +  LE     +  Y E +R    R +FL +D+++E++S   +P  +   + K
Sbjct: 1595 LLESAAKLSTTLEDSKKSLLKYFELQRHKISRLYFLGDDDLMELISNPCDPFVINKQIIK 1654

Query: 1002 CFEGINRLVFDGE-FNISAMISMEGEQVEF------LDMISVAAARGSVEKWLVQVEEQM 1054
             + GI  L+ D E  NI+   + EG ++ F      LD         S+E +L     Q+
Sbjct: 1655 LYPGIRSLIVDTENTNINGCTTNEGNELLFDNPICLLDNTQPLHWISSLEPFLKATLFQL 1714

Query: 1055 LKAVKSETEISYYDYP-NMGRVEWVLSWEGMVVLAISQIYWAVDVHESLNTHKLSELQAF 1113
                  +    YY+   N+   EW L +   + L   +     ++   +    L  +  F
Sbjct: 1715 FSTSFQQIRDFYYNKSRNVFCKEWFLRYPSQITLLSLRCTLCHEIETGIADCCLDAVFNF 1774

Query: 1114 HSELTKQLNETVAVIRRTDLTKLSSITVKALIVIDVHAKDVISDLIKKKVTEVTDFQWLA 1173
               +   ++  V +    +L+    +T+    ++  H K+ +  L K       ++ W  
Sbjct: 1775 ---INDGISSLVLLADENELSIKKKVTLMFNELL--HFKETVGLLCKNSFN---NYFWSR 1826

Query: 1174 QLRYYWEE----ERVYVKIINAVVHYAYEYLGNSDRLVITPLTDRCYRTLIGAYYLHLNG 1229
            +++ ++ E    E V +K+ +    YA+EY    D +V T LT  C+  L+ +   +L G
Sbjct: 1827 EVKAFYREDHDDEAVVIKMFSLEFIYAFEYSELDDPIVYTDLTRNCFSVLLHSIASNLGG 1886

Query: 1230 APEGPAGTGKTETTKDLAKALAVQCVVFNCSDGLDYKAMGKFFKGLASCGAW-------- 1281
            +P GPAGTGKTET K ++  L     VFNC +  +YK + +   GLA  G +        
Sbjct: 1887 SPIGPAGTGKTETVKAVSAYLGKNVFVFNCDNAFNYKTIQRILSGLAQIGTYICFDEFNR 1946

Query: 1282 -------AVR---QHLETFDFEGTTLKLNP----ACYVCITMNPGYAGRSELP------- 1320
                   A+    Q +++       L  +P    A  + +TMNPGY GR +LP       
Sbjct: 1947 LDSGTLSAISYDIQRIQSLVSHSDGLCQSPILLDAPTIFVTMNPGYLGRFKLPSNLKKLF 2006

Query: 1321 --------DNLKVL--------FRTVAMM--VPDYAMI---EQLSSQNHYDYGMRAVKTV 1359
                    DN K+         F+  +++  V D   +     LS+  HYD+G+RA+K V
Sbjct: 2007 RPIWMGSPDNKKICEILFLSFGFKESSLLSQVLDSFFLCCSGSLSNCLHYDFGLRAMKVV 2066

Query: 1360 LSAA----GNLKRSFPNESESVLLLRSITDVNLPKFLSFDVPLFEGIISDLF--PGISLP 1413
            + AA    G LK+      E  +L  +I +V  P  +  D+PLF       F  P +   
Sbjct: 2067 IKAAKRIKGFLKKKNTICQELEILWYAIREVLYPSLIYQDIPLFFKAEESYFNFPAVKAN 2126

Query: 1414 K-PDYENFLNACHDVCENNNLQPMECFLIKVIQTYEMMIVRHGFMLVGNPFSGKSMTLKV 1472
               D +NF          N     +   +K++Q Y+M    +G +L+G   SGKS   ++
Sbjct: 2127 AFIDPDNFEVNIEQTLSKNFFGNNQYLKLKIMQLYQMSEAYNGIILLGKTGSGKSQIFRI 2186

Query: 1473 LSEALSLIHERNQPDGCECTYKVLNPKAVTMGQLYGAFDPISYEWTDGIVATMFREFASE 1532
            L  AL  I       G +C   V++PKA+T   L+G+ +  + EWTDG+   + R+    
Sbjct: 2187 LQSALLNI-------GIDCIVYVISPKALTKESLFGSMNMDTREWTDGVFTKLLRKTRDS 2239

Query: 1533 DTPVRKWIVFDGPVDAVWIENMNTVLDDNKKLCLTSGEVMAMSNVMSMIFEVMDLSQASP 1592
                R   VFD  +   W+E MN++LDDNK L L++GE +A+   + + FE   ++  + 
Sbjct: 2240 CYYKRYMFVFDDELSPEWVEAMNSLLDDNKTLTLSNGERIALQPYVKIFFEADSVASLTR 2299

Query: 1593 ATVSRCGMI 1601
            AT+SRCG+I
Sbjct: 2300 ATISRCGLI 2308



 Score =  193 bits (471), Expect = 4e-49
 Identities = 233/1193 (19%), Positives = 488/1193 (40%), Gaps = 83/1193 (6%)

Query: 1917 YDTIFYGAIAATTDIYDQARENLRPTPAKSHYIFNLRDFSRVIQGCALLRKESAD-NKKT 1975
            Y TI    + A+   Y   REN + +     Y++  RD +R +       +  A+ N  +
Sbjct: 2686 YKTIILNIVKASVKFYQVLRENFKSST--QGYVYTPRDLTRWLISFKNYAESYAETNNLS 2743

Query: 1976 FIKIWIHEIMRVFYDRLVDDQDRAWFFGVLKKSTRDFMKDTFESALETYQDEKGEVNQEN 2035
             IK+W HE  RV  DRLV  ++ +W    L+K     + D  E           EV+   
Sbjct: 2744 LIKVWYHEACRVLLDRLVSQKECSWGMTELQKV---IVTDFGEF----------EVSVIF 2790

Query: 2036 IKKMMFGCYLDTDSAEGERRYEEIPSKEVFLNIAVSMLSEYNSMHKAKMTIVLFDYALEH 2095
             K+++F     TD  +    + +  S    L    S+  ++ S H    T+V  D  + H
Sbjct: 2791 EKQIIF-----TDILKNGLEFLDFASLRPKLE---SLYKKFYSSHPNN-TLVFVDETITH 2841

Query: 2096 LSKICRILSMPSGNALLVGVGGSGRQSLTRLASTILGQQVFQPEITKSYSVKDWHDDIKL 2155
            + +  RIL+    +ALL G  G G++++      +    +F+ +  ++YS++D+ D++K 
Sbjct: 2842 ILRFHRILNNSGMHALLQGSVGLGQKAVVEFVCWLNSFSLFELQKNQTYSIEDFEDNLKS 2901

Query: 2156 VLRESGGLNKDTTFLFTESQIKEESYIQNLDSLLNSGEVPNLYGLDEKQEILELVRLAAQ 2215
            +L  +G  N        ES      ++  L++LL + EV N +  ++  EI + +    +
Sbjct: 2902 ILILAGTTNCKACLAINESIAGVPGFLDLLNNLLTNSEVSNFFDQNDWAEIKKNLNKLNE 2961

Query: 2216 GGNRNLDISPLQILAFFVGRCKAKLHIVL-CFSPIGSSFRTRLRLYPSLVNCCTIDWYDS 2274
                  D S   +   F+      L +V   ++     F+T   L P+L+N CTID+Y S
Sbjct: 2962 FQPLKFD-SEESVTEIFMNNVFQNLCVVFYVYTSADVDFQTN-SLSPALLNRCTIDYYHS 3019

Query: 2275 WPEDALEMVAHHYM---VKVNVPD-------PVKSSAVI-ACKQFHVDARIVSIDFFNHF 2323
            W   ++  +A+  +   + +N  D        +K S++  A  Q  V+     +  F H 
Sbjct: 3020 WDYHSMLQIANEVLQETISLNALDHDNPNLKNIKGSSIYDAVAQAVVNTHTSIVWEFKHL 3079

Query: 2324 GRETYITSASYLDLIKSFTTLTNRKQRELRAAKLRYTNGLDQLGQAADAVAIMQRDLNAL 2383
            G+ +Y +   ++  + +F  +  R   +L   K R  NG  ++ + +  +   +  L+  
Sbjct: 3080 GKTSYFSCLHFIRFLNTFCLIFGRDANKLSKEKSRIENGFKKIKETSQGIDKFKEALSDQ 3139

Query: 2384 KPQLIVMAEKSAKMMQ-EIEVETAIADKAAAQVREDQKXXXXXXXXXXELKKDCEADLAL 2442
            +  L    + +   +Q  I+ + A+  K    + + +           E K     +++ 
Sbjct: 3140 QNVLFSKTKTANDRLQCIIQTKQAVEAKKVYSL-QAEASLQKKSFLLNEKKNSVMKEVSY 3198

Query: 2443 ALPILEDAIAALNTLKPADITIVKSMKNPPYTVKLVMAAVCVXXXXXXXXXXXXXXXXXX 2502
            A P + +A  +++ +K A +  ++S+  PP  +++ M  VC                   
Sbjct: 3199 AKPAVIEARKSVSDIKKAHLIELRSLSRPPMAIRITMEVVCKLLGFSATD---------- 3248

Query: 2503 MFDFWGPSKRILGDMGFLDSLKNFD-KDNIPVATMQKIRKEYLSNKDFKPHIVAKASAAA 2561
                W   +++L    F+  + N++ +  + +   +KI ++Y SN  F    V +AS A 
Sbjct: 3249 ----WKNVQQLLKRDDFIPKILNYNLEKELSINLRRKIEQDYFSNPIFTFDSVNRASKAC 3304

Query: 2562 EGLCKWIIAMDMYDXXXXXXXXXXXXXXXXXXXXXQTMAILEEKKAMVXXXXXXXXXXXX 2621
              L  WI ++  Y                           ++E  A              
Sbjct: 3305 GPLLLWIKSICNYSKVLEKLEPLNSEVDRLKLEQKNAEECIQETIAACKDLDEKLLQLQE 3364

Query: 2622 XXXXXNIKKKALEDEVQLCIDKLFRAEKLIGGLGGEKVRWTVAAENLQTLYDNLAGDILV 2681
                   +  ++E ++     K+ R+ ++I  L  E+  W+           NL G+ L+
Sbjct: 3365 EYASMISEIHSMELQMDEVKCKMQRSIEVITDLSIERNEWSGFLNLYPKRMWNLVGESLM 3424

Query: 2682 SCGIIAYLAPYTLPIRIEIIDKWRDLVIKLNMPHSEQFVFKDV-LGTDIKIQNWCIAGLP 2740
                + Y       +RI + +K   ++     P S+  V  ++       I++     L 
Sbjct: 3425 EASFVVYAGNLDPSMRIFLRNKCEPIISSFGFPISKSAVRTNIERCVQTSIESKYYKNLT 3484

Query: 2741 RDLFSIDNA-IIQDNSMRWSLLIDPQGQANKWIKTMEKTNDLQVLKFTDGNYMKVIETCL 2799
               +S++N  IIQ+N     L+IDP  Q    + ++ K     ++ F++ ++   I+  L
Sbjct: 3485 D--YSLENIYIIQENKSP-LLIIDPSSQILDILPSLYKGKASDLISFSNKSFQNQIKLAL 3541

Query: 2800 EYGKPALI-DCVLEDVEAPLDPVLLKLTYLQGGKEFIALGDNVIEYHPNFRLYMTTKLRN 2858
              G   +I D  L DV   ++P+L    +   G+       + I       +   +++++
Sbjct: 3542 LSGSAIIIKDAELWDVS--IEPLLKPEFFTGSGEVQTTFAKDTITITLPLNIIFFSEVQS 3599

Query: 2859 PHYLPEIFNKVTLINFALTKDGLEDQSLGIVVAKERPDLQEKREKLIVQGAANRAALKQV 2918
                 +    + ++NF L+   LE Q L  V++ + P + ++++       +    ++ +
Sbjct: 3600 NELENKASKFMNVVNFTLSISLLETQMLKSVISVQEPGVFKQKDNCFTLKLSIERQIRSL 3659

Query: 2919 EDDILRTLQETKGDILEDESAIEVLDSSK----NLAIDIMKKQEASLETETIIEKFRLGY 2974
            ++ +L+TL  +  +I+  +  + +L + K     + +   + Q  + + + +I +++L  
Sbjct: 3660 QEQLLKTLCSSNENIVGTDEIVVLLKNLKEKHETIRLAYSESQSINRKVDELIRRYKLSI 3719

Query: 2975 RPIASHSAVLYYCVTELPNVDPMYQYSLTWFINLYIISIENAN---KSKDLEKRLKFLKD 3031
            +   S   V  + ++   +    + +  + F  +  + +EN N   KS  ++     ++ 
Sbjct: 3720 KSFLSVVVVFQHFISLKKSYSFSFNFIWSTFHQMLNVVLENRNQDFKSLIMDALRDLIRR 3779

Query: 3032 TFTYNLYSNVCRSLFDKDKLMFSFIMCSKMMLSTEKMNVDEYKFLITGGIAVE 3084
             F Y         +F +D+++F F++   M     K      K LI  G  +E
Sbjct: 3780 CFLY---------IFPEDRVLFLFLL---MFFFFPKETESLRKLLIVNGKTLE 3820



 Score = 43.6 bits (98), Expect = 6e-04
 Identities = 40/156 (25%), Positives = 64/156 (41%), Gaps = 9/156 (5%)

Query: 1781 TVIPTLETEKFMYLLNLHSKYLKPLLLIGPTGTGKSFYVQNFLMNNLDMEKYTPGFIXXX 1840
            TVIPTL+T ++   LN      + ++  GP G+GKS  +   L +  D+E     F    
Sbjct: 2492 TVIPTLDTVRYAEFLNFSLTKNRCVIFCGPPGSGKSMLMLGTLRSRQDVEVIALNF---S 2548

Query: 1841 XXXSANQTQDLVISKLVKRRKNNY----GPTRGKHAIIFIDDMNMPAKEVYGAQPAIELL 1896
               S+      +    V  R             K  ++F D++N+P      A+  I  L
Sbjct: 2549 ISTSSKSVVSFLEQSTVYYRSTGMTIMCPKNHEKVLVLFCDEINLPRSRNCLAEDVICFL 2608

Query: 1897 RLYFD-QKHWYDLKTTDKLFIYDTIFYGAIAATTDI 1931
            R   + Q  W+ L   + + I +    GA   +TDI
Sbjct: 2609 RHMLEHQGFWHPLH-KEWVTIKNIFVCGACNPSTDI 2643



 Score = 38.3 bits (85), Expect = 0.021
 Identities = 55/252 (21%), Positives = 96/252 (38%), Gaps = 15/252 (5%)

Query: 3230 SISLGQGQGP-IARAMIEKAQSEGGWVCLQNCHLAVSWLPVLEKIVEGFDLTNTDLSFRL 3288
            ++SLG  +   +A + ++ A +E  W+ + N HL+  W   L   +      N+    R+
Sbjct: 3934 TVSLGSAENESLADSYLKLASTEPLWLFINNIHLSTPWAEKLPSKMSNHLHKNS----RI 3989

Query: 3289 WLTSYPSDKFPQSVLQVGVKMTNEPPTGLQHNLNRSYISEPLKEPEFYEGCPGKDKTFSK 3348
               S   ++ P  +L +   +     T  ++NL    + E L  P      P     F +
Sbjct: 3990 VCLSEIHNQLPHQLLCISRSIVFNKQTSFKNNLLN--LLELL--PTMTHTLP--HNRF-R 4042

Query: 3349 LLYGISFFHAVVQERKKFGPLGWNIQYGFNDSDFQISVMQLQMFLNQ---YEEIQYVAIK 3405
            L + +S+ HA + E   F    W     F+DSDF      L   L +    EE  +   K
Sbjct: 4043 LFFFLSWLHATLAEIYCFTCSSWKEPCYFDDSDFYFGTKILCNILYRNVHLEEFSWGTFK 4102

Query: 3406 YLTGECNYGGRVTDDWDRRLIVTILDNYVNSGVVNDPNYLFCELGQQYGLPRRCEYQDYL 3465
             L     YG +V+   D   +  IL   +        + +      ++ LP    +    
Sbjct: 4103 DLLLNVVYGPKVSASSDFIALDKILKRLIAQFKTQISSNILLTDNFKFILPYEITFSSAK 4162

Query: 3466 KHIESVPINPPP 3477
            + I  +P   PP
Sbjct: 4163 EVIGQLPDEIPP 4174


>SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr
            1|||Manual
          Length = 234

 Score = 33.5 bits (73), Expect = 0.59
 Identities = 14/28 (50%), Positives = 19/28 (67%)

Query: 1801 YLKPLLLIGPTGTGKSFYVQNFLMNNLD 1828
            YL  ++L GP+GTGKS  +Q F+ N  D
Sbjct: 8    YLVKIVLAGPSGTGKSCLLQRFVKNQWD 35


>SPAC1565.04c |ste4||adaptor protein Ste4|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 264

 Score = 32.7 bits (71), Expect = 1.0
 Identities = 37/174 (21%), Positives = 78/174 (44%), Gaps = 12/174 (6%)

Query: 484 NESICSEFEIIAAKALKEPENATELIEQGVYILHAKTVLVEALKERILVQINIISNLLEM 543
           NE++C+  E +     KE      ++ + + +L +  +    + E +  +I+I+S +  M
Sbjct: 13  NEAVCNWIEQLGFPH-KEAFEDYHILGKDIDLLSSNDLRDMGI-ESVGHRIDILSAIQSM 70

Query: 544 TSLSSDHVKSNTRTVNWLKDIKPIFEKNAAAYETFKADMEESLLGKIAYLNKEVTDMTPY 603
                D ++   +    LK+I+  ++K     E    D   SL  ++ YL  E T +   
Sbjct: 71  KKQQKDKLQQENKDQE-LKNIEESYKKLEEKTEHLSDD-NVSLEKRVEYLETENTKLVKT 128

Query: 604 LELLDNMDDVNHTLEYLEYLRKLVHRLHDCDKLVTWINNEETTFKFPVTNYPEL 657
           L  L++        E+L+ LRK+   + +  +L T  +++ ++   PV   P +
Sbjct: 129 LNSLNS--------EFLQLLRKIAINVKEGRQLTTENSSDTSSMTHPVQPSPSV 174


>SPAC343.15 |||tRNA isopentenyltransferase|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 434

 Score = 32.3 bits (70), Expect = 1.4
 Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 4/71 (5%)

Query: 19  PVMPPVPDIHMMDKLPFTPLPPYNRIKDKQAKFRKILEEKATKRKVEI----ARPLLELY 74
           P  PP PD H++D  P   L    +I    A+     + +  +R +EI     RP  E+Y
Sbjct: 127 PSKPPHPDSHILDDDPSAMLSYLKKIDPVMAEQWHPRDTRKIRRSLEIYFHTGRPPSEIY 186

Query: 75  ERDRLVESQSK 85
              ++  S SK
Sbjct: 187 SEQKMKSSGSK 197


>SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 2104

 Score = 32.3 bits (70), Expect = 1.4
 Identities = 37/166 (22%), Positives = 75/166 (45%), Gaps = 19/166 (11%)

Query: 471 DIIAGIVKGHMAENESICSEFEIIAAKALKEPENATELIEQGVYILHAKTVLVEALKERI 530
           D +   ++  +   + + +E  I   + L+   +  E  EQ   + H K +LVE    R+
Sbjct: 842 DALINNLQNQLESTKEVANELTITKERVLQLTNDLQE--EQA--LAHEKDILVERANSRV 897

Query: 531 LVQINIISNLLEMTSLSSDHVKSNTRTVNWLKDIKPIFEKNAAAYET---FKADMEESLL 587
            V    +S+L    +++ +  +       +L   K   E++ A  +T   + +D+  +L 
Sbjct: 898 EVVHERLSSLENQVTIADEKYE-------FLYAEKQSIEEDLANKQTEISYLSDLSSTLE 950

Query: 588 GKIAYLNK-EVTDMTPYLEL----LDNMDDVNHTLEYLEYLRKLVH 628
            K++ + K E T  + Y EL    L+ M D  H+ ++L  L K ++
Sbjct: 951 KKLSSIKKDEQTISSKYKELEKDYLNIMADYQHSSQHLSNLEKAIN 996


>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 1115

 Score = 31.9 bits (69), Expect = 1.8
 Identities = 28/109 (25%), Positives = 52/109 (47%), Gaps = 9/109 (8%)

Query: 339 SHISQRLMPIEQYLKIPYNYDALPVVYNEWLHKDGHERLQQQLNIVFKPLNQYVEKLRQE 398
           S +  R+   EQ +++   Y  L  +  ++ +K    R++QQ       L +YVE++ QE
Sbjct: 490 SMMVSRMKTQEQSIELTRLYKQLQDIEEDYENK--LMRMEQQWREDVDQLQEYVEEITQE 547

Query: 399 YNMLYGTPAKEALEKFINETEAFEELRNKIK--YYQDIDSNITAVLENE 445
                    KE L K   E++ +EE+  K++    ++I+     + ENE
Sbjct: 548 LQ-----DTKEVLSKSSKESDDYEEVVGKLRTEAEREIEKFEKTIRENE 591


>SPBC1539.05 |cog3||Golgi transport complex subunit Cog3
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 735

 Score = 31.1 bits (67), Expect = 3.2
 Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 3/60 (5%)

Query: 372 DGHERLQQQLNIVFKPLNQYVEKLRQEYNMLYGTPAKEALEKFINETEAFEELRNKIKYY 431
           D  + L QQL +    +N Y+E     Y         E++ +F N  + F ELR +I  Y
Sbjct: 616 DTRQELNQQLRVA---VNGYIETAVIHYTECLSIGNLESITEFQNRIQKFPELRQQISLY 672


>SPAC9E9.08 |rad26||ATRIP|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 614

 Score = 30.7 bits (66), Expect = 4.2
 Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 7/76 (9%)

Query: 2901 REKLIVQGAANRAAL-------KQVEDDILRTLQETKGDILEDESAIEVLDSSKNLAIDI 2953
            R  L+ Q  AN AAL       KQ +D+  R L+E K +I   ++     +     AI+ 
Sbjct: 96   RANLLKQSEANNAALESLNNSIKQKQDEYQRKLEELKKEIEYAKTKSLFHEREAQDAIET 155

Query: 2954 MKKQEASLETETIIEK 2969
            MKK +  ++   I++K
Sbjct: 156  MKKMKRDVKNSPIMKK 171


>SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces
            pombe|chr 3|||Manual
          Length = 1526

 Score = 30.7 bits (66), Expect = 4.2
 Identities = 30/127 (23%), Positives = 58/127 (45%), Gaps = 14/127 (11%)

Query: 613  VNHTLEYLEYLRKLVHRLHDCDKLVTWINNEETTFKFPVTNYPELE-ELKEFIIPFYSLV 671
            +N+  E + YL   V +L    K +  +N+++  ++   T   ELE ++KE +    SL 
Sbjct: 1071 INNLEEKVNYLEADVKQLPKLKKELESLNDKDQLYQLQATKNKELEAKVKECLNNIKSLT 1130

Query: 672  YLVHRWKRSYYTWMDGPFEYLDHNQIEQDHDFYYKEFLKIS--KNYRNKIKQQIAEGVEK 729
              +   +       D   +Y++  +I ++        LK+S  +NY+ K      EG++ 
Sbjct: 1131 KELENKEEKCQNLSDASLKYIELQEIHEN------LLLKVSDLENYKKKY-----EGLQL 1179

Query: 730  RFQGLVD 736
              +GL D
Sbjct: 1180 DLEGLKD 1186


>SPBP16F5.02 |mcs2||cyclin Mcs2|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 322

 Score = 30.7 bits (66), Expect = 4.2
 Identities = 32/127 (25%), Positives = 55/127 (43%), Gaps = 9/127 (7%)

Query: 546 LSSDHVKSNTRTVNWLKDIKPIFEKNAAAYETFKADMEESLLGKIAYLNKEVTDMTPYLE 605
           +S+D  + +T   +W+   + + +  A   E F   + E +L +++  NKE +     LE
Sbjct: 1   MSADKFRDSTHYRDWIFTEEDLSKTRAKVNEKFTNIVRERMLEELSLQNKEAS-----LE 55

Query: 606 LLDNMDDVNHTLEYLEYLRKLVHRLHDCDKLVTWINNEETTF--KFPVTNYPELEELKEF 663
           +L     V   LE + Y    ++ L     L T I +    F  +F + N   + E    
Sbjct: 56  VLPPTLTVEEELELVNYYSFQLNALSSALSLPTHIRSTAILFFKRFYLIN--SVMEYSPK 113

Query: 664 IIPFYSL 670
           II F SL
Sbjct: 114 IISFTSL 120


>SPBC839.03c |||neddylation protein Dcn1|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 251

 Score = 30.7 bits (66), Expect = 4.2
 Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 1/39 (2%)

Query: 356 YNYDALPVVYNEWLHKDGHERLQQQLNIVFKPLNQYVEK 394
           YN+D   V Y +W+ +   E  ++QLN VF   +   +K
Sbjct: 30  YNFD-YDVAYTKWIQQKSREEAEKQLNNVFSQFSSKEDK 67


>SPCC24B10.19c |||sequence orphan|Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 455

 Score = 30.7 bits (66), Expect = 4.2
 Identities = 11/43 (25%), Positives = 26/43 (60%), Gaps = 1/43 (2%)

Query: 307 VLNVCLDFDGEFIYDPTLETIYEVFHNIADAISHI-SQRLMPI 348
           V N+C+ +  +  YDP+    YE++ N +  ++ + +QR++ +
Sbjct: 151 VANLCIQYGSQIFYDPSFRNAYELWSNPSVLLAFLKAQRVLVV 193


>SPAC31G5.14 |gcv1|n313|glycine decarboxylase T
            subunit|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 387

 Score = 30.3 bits (65), Expect = 5.5
 Identities = 15/36 (41%), Positives = 21/36 (58%)

Query: 1100 ESLNTHKLSELQAFHSELTKQLNETVAVIRRTDLTK 1135
            ES+    L EL+ FHS L+   NET  +I  T ++K
Sbjct: 89   ESITPSSLKELKPFHSTLSAFTNETGGIIDDTIISK 124


>SPAC458.02c |||mRNP complex |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 468

 Score = 30.3 bits (65), Expect = 5.5
 Identities = 15/34 (44%), Positives = 20/34 (58%)

Query: 362 PVVYNEWLHKDGHERLQQQLNIVFKPLNQYVEKL 395
           PV  NE LHK+  E L  ++N   K  N++ EKL
Sbjct: 6   PVRPNEALHKEALEELDAKINEAKKRFNEHKEKL 39


>SPBP8B7.09c |||karyopherin|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 978

 Score = 29.9 bits (64), Expect = 7.3
 Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 1/41 (2%)

Query: 416 NETEA-FEELRNKIKYYQDIDSNITAVLENEYFNCAVVCQL 455
           +E EA F+E+R K+K +QD  ++I + L + Y   A+   L
Sbjct: 403 SEEEAEFQEMRKKLKIFQDTINSIDSSLFSSYMYSAITSSL 443


>SPBPJ4664.06 |gpt1||UDP-glucose-glycoprotein glucosyltransferase
            Gpt1|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 1448

 Score = 29.5 bits (63), Expect = 9.6
 Identities = 14/40 (35%), Positives = 23/40 (57%)

Query: 1910 TTDKLFIYDTIFYGAIAATTDIYDQARENLRPTPAKSHYI 1949
            T DK+ I D +   +IA++TD+    RE  +  P  +HY+
Sbjct: 272  TPDKIAILDLLATQSIASSTDMLTAFRELTQDFPIYAHYL 311


>SPCC1795.06 |map2||P-factor |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 201

 Score = 29.5 bits (63), Expect = 9.6
 Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 3/52 (5%)

Query: 1572 MAMSNVMSMIFEVMDLSQASPATVSRCGMIYMESTSLGFMPFYKSWLNTLNP 1623
            M ++ V++++F    L+ ASP  V+  G++ +  +   F+  Y+SW    NP
Sbjct: 1    MKITAVIALLFS---LAAASPIPVADPGVVSVSKSYADFLRVYQSWNTFANP 49


>SPCC622.13c |||conserved eukaryotic protein|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 1098

 Score = 29.5 bits (63), Expect = 9.6
 Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 1/43 (2%)

Query: 306 PVLNVCLDFDGEFIYDPTLETIYEVFHNIADAI-SHISQRLMP 347
           P++ + LD D E + +  LETIY+V     D + S I Q L+P
Sbjct: 875 PLVVIQLDTDNELLVECALETIYQVCALADDFMTSRIRQDLLP 917


>SPBC3F6.04c |||U3 snoRNP protein Nop14 |Schizosaccharomyces pombe|chr
            2|||Manual
          Length = 827

 Score = 29.5 bits (63), Expect = 9.6
 Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 2/59 (3%)

Query: 2026 DEKGEVNQENIKKMMFGCYLDTDSAEGERRYEEI-PSKEVFLNIAVSMLSEYNSMHKAK 2083
            DE  E+N E +++M FG + D+D AE E+  E    SK   ++  ++    Y +  +A+
Sbjct: 169  DEGEELNDEVVRRMHFGGFEDSD-AENEKEGEGAHKSKREVMSEIIAKSKHYKAERQAE 226


  Database: spombe
    Posted date:  Oct 3, 2007  3:31 PM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.321    0.137    0.410 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,540,867
Number of Sequences: 5004
Number of extensions: 782235
Number of successful extensions: 2272
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 2214
Number of HSP's gapped (non-prelim): 74
length of query: 3796
length of database: 2,362,478
effective HSP length: 87
effective length of query: 3709
effective length of database: 1,927,130
effective search space: 7147725170
effective search space used: 7147725170
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 63 (29.5 bits)

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