BLASTP 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BGIBMGA001869-TA|BGIBMGA001869-PA|IPR013602|Dynein heavy chain, N-terminal region 2, IPR011704|ATPase associated with various cellular activities, AAA-5, IPR004273|Dynein heavy chain (3796 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain |Schizosaccha... 246 4e-65 SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr 1||... 33 0.59 SPAC1565.04c |ste4||adaptor protein Ste4|Schizosaccharomyces pom... 33 1.0 SPAC343.15 |||tRNA isopentenyltransferase|Schizosaccharomyces po... 32 1.4 SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyce... 32 1.4 SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy... 32 1.8 SPBC1539.05 |cog3||Golgi transport complex subunit Cog3 |Schizos... 31 3.2 SPAC9E9.08 |rad26||ATRIP|Schizosaccharomyces pombe|chr 1|||Manual 31 4.2 SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces... 31 4.2 SPBP16F5.02 |mcs2||cyclin Mcs2|Schizosaccharomyces pombe|chr 2||... 31 4.2 SPBC839.03c |||neddylation protein Dcn1|Schizosaccharomyces pomb... 31 4.2 SPCC24B10.19c |||sequence orphan|Schizosaccharomyces pombe|chr 3... 31 4.2 SPAC31G5.14 |gcv1|n313|glycine decarboxylase T subunit|Schizosac... 30 5.5 SPAC458.02c |||mRNP complex |Schizosaccharomyces pombe|chr 1|||M... 30 5.5 SPBP8B7.09c |||karyopherin|Schizosaccharomyces pombe|chr 2|||Manual 30 7.3 SPBPJ4664.06 |gpt1||UDP-glucose-glycoprotein glucosyltransferase... 29 9.6 SPCC1795.06 |map2||P-factor |Schizosaccharomyces pombe|chr 3|||M... 29 9.6 SPCC622.13c |||conserved eukaryotic protein|Schizosaccharomyces ... 29 9.6 SPBC3F6.04c |||U3 snoRNP protein Nop14 |Schizosaccharomyces pomb... 29 9.6 >SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain |Schizosaccharomyces pombe|chr 1|||Manual Length = 4196 Score = 246 bits (603), Expect = 4e-65 Identities = 207/789 (26%), Positives = 354/789 (44%), Gaps = 85/789 (10%) Query: 883 WGKVQSQWLYLLPIFSSKDIVAQM-PEEGVMFVEVNNIYRRYMGSVDKDPHVLEIAGGTG 941 W ++Q W +L IF + Q+ PE F + Y + + + ++ +++ Sbjct: 1535 WKEIQQIWTHLSAIFYESTYIQQLLPELAASFFNSSKTYMHLVTLLKERSYLYKVSNIPS 1594 Query: 942 ILEAFRAATAFLEKINDGVNNYLEKKRLYFPRFFFLSNDEMLEILSETKNPLKVQPHLKK 1001 +LE+ + LE + Y E +R R +FL +D+++E++S +P + + K Sbjct: 1595 LLESAAKLSTTLEDSKKSLLKYFELQRHKISRLYFLGDDDLMELISNPCDPFVINKQIIK 1654 Query: 1002 CFEGINRLVFDGE-FNISAMISMEGEQVEF------LDMISVAAARGSVEKWLVQVEEQM 1054 + GI L+ D E NI+ + EG ++ F LD S+E +L Q+ Sbjct: 1655 LYPGIRSLIVDTENTNINGCTTNEGNELLFDNPICLLDNTQPLHWISSLEPFLKATLFQL 1714 Query: 1055 LKAVKSETEISYYDYP-NMGRVEWVLSWEGMVVLAISQIYWAVDVHESLNTHKLSELQAF 1113 + YY+ N+ EW L + + L + ++ + L + F Sbjct: 1715 FSTSFQQIRDFYYNKSRNVFCKEWFLRYPSQITLLSLRCTLCHEIETGIADCCLDAVFNF 1774 Query: 1114 HSELTKQLNETVAVIRRTDLTKLSSITVKALIVIDVHAKDVISDLIKKKVTEVTDFQWLA 1173 + ++ V + +L+ +T+ ++ H K+ + L K ++ W Sbjct: 1775 ---INDGISSLVLLADENELSIKKKVTLMFNELL--HFKETVGLLCKNSFN---NYFWSR 1826 Query: 1174 QLRYYWEE----ERVYVKIINAVVHYAYEYLGNSDRLVITPLTDRCYRTLIGAYYLHLNG 1229 +++ ++ E E V +K+ + YA+EY D +V T LT C+ L+ + +L G Sbjct: 1827 EVKAFYREDHDDEAVVIKMFSLEFIYAFEYSELDDPIVYTDLTRNCFSVLLHSIASNLGG 1886 Query: 1230 APEGPAGTGKTETTKDLAKALAVQCVVFNCSDGLDYKAMGKFFKGLASCGAW-------- 1281 +P GPAGTGKTET K ++ L VFNC + +YK + + GLA G + Sbjct: 1887 SPIGPAGTGKTETVKAVSAYLGKNVFVFNCDNAFNYKTIQRILSGLAQIGTYICFDEFNR 1946 Query: 1282 -------AVR---QHLETFDFEGTTLKLNP----ACYVCITMNPGYAGRSELP------- 1320 A+ Q +++ L +P A + +TMNPGY GR +LP Sbjct: 1947 LDSGTLSAISYDIQRIQSLVSHSDGLCQSPILLDAPTIFVTMNPGYLGRFKLPSNLKKLF 2006 Query: 1321 --------DNLKVL--------FRTVAMM--VPDYAMI---EQLSSQNHYDYGMRAVKTV 1359 DN K+ F+ +++ V D + LS+ HYD+G+RA+K V Sbjct: 2007 RPIWMGSPDNKKICEILFLSFGFKESSLLSQVLDSFFLCCSGSLSNCLHYDFGLRAMKVV 2066 Query: 1360 LSAA----GNLKRSFPNESESVLLLRSITDVNLPKFLSFDVPLFEGIISDLF--PGISLP 1413 + AA G LK+ E +L +I +V P + D+PLF F P + Sbjct: 2067 IKAAKRIKGFLKKKNTICQELEILWYAIREVLYPSLIYQDIPLFFKAEESYFNFPAVKAN 2126 Query: 1414 K-PDYENFLNACHDVCENNNLQPMECFLIKVIQTYEMMIVRHGFMLVGNPFSGKSMTLKV 1472 D +NF N + +K++Q Y+M +G +L+G SGKS ++ Sbjct: 2127 AFIDPDNFEVNIEQTLSKNFFGNNQYLKLKIMQLYQMSEAYNGIILLGKTGSGKSQIFRI 2186 Query: 1473 LSEALSLIHERNQPDGCECTYKVLNPKAVTMGQLYGAFDPISYEWTDGIVATMFREFASE 1532 L AL I G +C V++PKA+T L+G+ + + EWTDG+ + R+ Sbjct: 2187 LQSALLNI-------GIDCIVYVISPKALTKESLFGSMNMDTREWTDGVFTKLLRKTRDS 2239 Query: 1533 DTPVRKWIVFDGPVDAVWIENMNTVLDDNKKLCLTSGEVMAMSNVMSMIFEVMDLSQASP 1592 R VFD + W+E MN++LDDNK L L++GE +A+ + + FE ++ + Sbjct: 2240 CYYKRYMFVFDDELSPEWVEAMNSLLDDNKTLTLSNGERIALQPYVKIFFEADSVASLTR 2299 Query: 1593 ATVSRCGMI 1601 AT+SRCG+I Sbjct: 2300 ATISRCGLI 2308 Score = 193 bits (471), Expect = 4e-49 Identities = 233/1193 (19%), Positives = 488/1193 (40%), Gaps = 83/1193 (6%) Query: 1917 YDTIFYGAIAATTDIYDQARENLRPTPAKSHYIFNLRDFSRVIQGCALLRKESAD-NKKT 1975 Y TI + A+ Y REN + + Y++ RD +R + + A+ N + Sbjct: 2686 YKTIILNIVKASVKFYQVLRENFKSST--QGYVYTPRDLTRWLISFKNYAESYAETNNLS 2743 Query: 1976 FIKIWIHEIMRVFYDRLVDDQDRAWFFGVLKKSTRDFMKDTFESALETYQDEKGEVNQEN 2035 IK+W HE RV DRLV ++ +W L+K + D E EV+ Sbjct: 2744 LIKVWYHEACRVLLDRLVSQKECSWGMTELQKV---IVTDFGEF----------EVSVIF 2790 Query: 2036 IKKMMFGCYLDTDSAEGERRYEEIPSKEVFLNIAVSMLSEYNSMHKAKMTIVLFDYALEH 2095 K+++F TD + + + S L S+ ++ S H T+V D + H Sbjct: 2791 EKQIIF-----TDILKNGLEFLDFASLRPKLE---SLYKKFYSSHPNN-TLVFVDETITH 2841 Query: 2096 LSKICRILSMPSGNALLVGVGGSGRQSLTRLASTILGQQVFQPEITKSYSVKDWHDDIKL 2155 + + RIL+ +ALL G G G++++ + +F+ + ++YS++D+ D++K Sbjct: 2842 ILRFHRILNNSGMHALLQGSVGLGQKAVVEFVCWLNSFSLFELQKNQTYSIEDFEDNLKS 2901 Query: 2156 VLRESGGLNKDTTFLFTESQIKEESYIQNLDSLLNSGEVPNLYGLDEKQEILELVRLAAQ 2215 +L +G N ES ++ L++LL + EV N + ++ EI + + + Sbjct: 2902 ILILAGTTNCKACLAINESIAGVPGFLDLLNNLLTNSEVSNFFDQNDWAEIKKNLNKLNE 2961 Query: 2216 GGNRNLDISPLQILAFFVGRCKAKLHIVL-CFSPIGSSFRTRLRLYPSLVNCCTIDWYDS 2274 D S + F+ L +V ++ F+T L P+L+N CTID+Y S Sbjct: 2962 FQPLKFD-SEESVTEIFMNNVFQNLCVVFYVYTSADVDFQTN-SLSPALLNRCTIDYYHS 3019 Query: 2275 WPEDALEMVAHHYM---VKVNVPD-------PVKSSAVI-ACKQFHVDARIVSIDFFNHF 2323 W ++ +A+ + + +N D +K S++ A Q V+ + F H Sbjct: 3020 WDYHSMLQIANEVLQETISLNALDHDNPNLKNIKGSSIYDAVAQAVVNTHTSIVWEFKHL 3079 Query: 2324 GRETYITSASYLDLIKSFTTLTNRKQRELRAAKLRYTNGLDQLGQAADAVAIMQRDLNAL 2383 G+ +Y + ++ + +F + R +L K R NG ++ + + + + L+ Sbjct: 3080 GKTSYFSCLHFIRFLNTFCLIFGRDANKLSKEKSRIENGFKKIKETSQGIDKFKEALSDQ 3139 Query: 2384 KPQLIVMAEKSAKMMQ-EIEVETAIADKAAAQVREDQKXXXXXXXXXXELKKDCEADLAL 2442 + L + + +Q I+ + A+ K + + + E K +++ Sbjct: 3140 QNVLFSKTKTANDRLQCIIQTKQAVEAKKVYSL-QAEASLQKKSFLLNEKKNSVMKEVSY 3198 Query: 2443 ALPILEDAIAALNTLKPADITIVKSMKNPPYTVKLVMAAVCVXXXXXXXXXXXXXXXXXX 2502 A P + +A +++ +K A + ++S+ PP +++ M VC Sbjct: 3199 AKPAVIEARKSVSDIKKAHLIELRSLSRPPMAIRITMEVVCKLLGFSATD---------- 3248 Query: 2503 MFDFWGPSKRILGDMGFLDSLKNFD-KDNIPVATMQKIRKEYLSNKDFKPHIVAKASAAA 2561 W +++L F+ + N++ + + + +KI ++Y SN F V +AS A Sbjct: 3249 ----WKNVQQLLKRDDFIPKILNYNLEKELSINLRRKIEQDYFSNPIFTFDSVNRASKAC 3304 Query: 2562 EGLCKWIIAMDMYDXXXXXXXXXXXXXXXXXXXXXQTMAILEEKKAMVXXXXXXXXXXXX 2621 L WI ++ Y ++E A Sbjct: 3305 GPLLLWIKSICNYSKVLEKLEPLNSEVDRLKLEQKNAEECIQETIAACKDLDEKLLQLQE 3364 Query: 2622 XXXXXNIKKKALEDEVQLCIDKLFRAEKLIGGLGGEKVRWTVAAENLQTLYDNLAGDILV 2681 + ++E ++ K+ R+ ++I L E+ W+ NL G+ L+ Sbjct: 3365 EYASMISEIHSMELQMDEVKCKMQRSIEVITDLSIERNEWSGFLNLYPKRMWNLVGESLM 3424 Query: 2682 SCGIIAYLAPYTLPIRIEIIDKWRDLVIKLNMPHSEQFVFKDV-LGTDIKIQNWCIAGLP 2740 + Y +RI + +K ++ P S+ V ++ I++ L Sbjct: 3425 EASFVVYAGNLDPSMRIFLRNKCEPIISSFGFPISKSAVRTNIERCVQTSIESKYYKNLT 3484 Query: 2741 RDLFSIDNA-IIQDNSMRWSLLIDPQGQANKWIKTMEKTNDLQVLKFTDGNYMKVIETCL 2799 +S++N IIQ+N L+IDP Q + ++ K ++ F++ ++ I+ L Sbjct: 3485 D--YSLENIYIIQENKSP-LLIIDPSSQILDILPSLYKGKASDLISFSNKSFQNQIKLAL 3541 Query: 2800 EYGKPALI-DCVLEDVEAPLDPVLLKLTYLQGGKEFIALGDNVIEYHPNFRLYMTTKLRN 2858 G +I D L DV ++P+L + G+ + I + +++++ Sbjct: 3542 LSGSAIIIKDAELWDVS--IEPLLKPEFFTGSGEVQTTFAKDTITITLPLNIIFFSEVQS 3599 Query: 2859 PHYLPEIFNKVTLINFALTKDGLEDQSLGIVVAKERPDLQEKREKLIVQGAANRAALKQV 2918 + + ++NF L+ LE Q L V++ + P + ++++ + ++ + Sbjct: 3600 NELENKASKFMNVVNFTLSISLLETQMLKSVISVQEPGVFKQKDNCFTLKLSIERQIRSL 3659 Query: 2919 EDDILRTLQETKGDILEDESAIEVLDSSK----NLAIDIMKKQEASLETETIIEKFRLGY 2974 ++ +L+TL + +I+ + + +L + K + + + Q + + + +I +++L Sbjct: 3660 QEQLLKTLCSSNENIVGTDEIVVLLKNLKEKHETIRLAYSESQSINRKVDELIRRYKLSI 3719 Query: 2975 RPIASHSAVLYYCVTELPNVDPMYQYSLTWFINLYIISIENAN---KSKDLEKRLKFLKD 3031 + S V + ++ + + + + F + + +EN N KS ++ ++ Sbjct: 3720 KSFLSVVVVFQHFISLKKSYSFSFNFIWSTFHQMLNVVLENRNQDFKSLIMDALRDLIRR 3779 Query: 3032 TFTYNLYSNVCRSLFDKDKLMFSFIMCSKMMLSTEKMNVDEYKFLITGGIAVE 3084 F Y +F +D+++F F++ M K K LI G +E Sbjct: 3780 CFLY---------IFPEDRVLFLFLL---MFFFFPKETESLRKLLIVNGKTLE 3820 Score = 43.6 bits (98), Expect = 6e-04 Identities = 40/156 (25%), Positives = 64/156 (41%), Gaps = 9/156 (5%) Query: 1781 TVIPTLETEKFMYLLNLHSKYLKPLLLIGPTGTGKSFYVQNFLMNNLDMEKYTPGFIXXX 1840 TVIPTL+T ++ LN + ++ GP G+GKS + L + D+E F Sbjct: 2492 TVIPTLDTVRYAEFLNFSLTKNRCVIFCGPPGSGKSMLMLGTLRSRQDVEVIALNF---S 2548 Query: 1841 XXXSANQTQDLVISKLVKRRKNNY----GPTRGKHAIIFIDDMNMPAKEVYGAQPAIELL 1896 S+ + V R K ++F D++N+P A+ I L Sbjct: 2549 ISTSSKSVVSFLEQSTVYYRSTGMTIMCPKNHEKVLVLFCDEINLPRSRNCLAEDVICFL 2608 Query: 1897 RLYFD-QKHWYDLKTTDKLFIYDTIFYGAIAATTDI 1931 R + Q W+ L + + I + GA +TDI Sbjct: 2609 RHMLEHQGFWHPLH-KEWVTIKNIFVCGACNPSTDI 2643 Score = 38.3 bits (85), Expect = 0.021 Identities = 55/252 (21%), Positives = 96/252 (38%), Gaps = 15/252 (5%) Query: 3230 SISLGQGQGP-IARAMIEKAQSEGGWVCLQNCHLAVSWLPVLEKIVEGFDLTNTDLSFRL 3288 ++SLG + +A + ++ A +E W+ + N HL+ W L + N+ R+ Sbjct: 3934 TVSLGSAENESLADSYLKLASTEPLWLFINNIHLSTPWAEKLPSKMSNHLHKNS----RI 3989 Query: 3289 WLTSYPSDKFPQSVLQVGVKMTNEPPTGLQHNLNRSYISEPLKEPEFYEGCPGKDKTFSK 3348 S ++ P +L + + T ++NL + E L P P F + Sbjct: 3990 VCLSEIHNQLPHQLLCISRSIVFNKQTSFKNNLLN--LLELL--PTMTHTLP--HNRF-R 4042 Query: 3349 LLYGISFFHAVVQERKKFGPLGWNIQYGFNDSDFQISVMQLQMFLNQ---YEEIQYVAIK 3405 L + +S+ HA + E F W F+DSDF L L + EE + K Sbjct: 4043 LFFFLSWLHATLAEIYCFTCSSWKEPCYFDDSDFYFGTKILCNILYRNVHLEEFSWGTFK 4102 Query: 3406 YLTGECNYGGRVTDDWDRRLIVTILDNYVNSGVVNDPNYLFCELGQQYGLPRRCEYQDYL 3465 L YG +V+ D + IL + + + ++ LP + Sbjct: 4103 DLLLNVVYGPKVSASSDFIALDKILKRLIAQFKTQISSNILLTDNFKFILPYEITFSSAK 4162 Query: 3466 KHIESVPINPPP 3477 + I +P PP Sbjct: 4163 EVIGQLPDEIPP 4174 >SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr 1|||Manual Length = 234 Score = 33.5 bits (73), Expect = 0.59 Identities = 14/28 (50%), Positives = 19/28 (67%) Query: 1801 YLKPLLLIGPTGTGKSFYVQNFLMNNLD 1828 YL ++L GP+GTGKS +Q F+ N D Sbjct: 8 YLVKIVLAGPSGTGKSCLLQRFVKNQWD 35 >SPAC1565.04c |ste4||adaptor protein Ste4|Schizosaccharomyces pombe|chr 1|||Manual Length = 264 Score = 32.7 bits (71), Expect = 1.0 Identities = 37/174 (21%), Positives = 78/174 (44%), Gaps = 12/174 (6%) Query: 484 NESICSEFEIIAAKALKEPENATELIEQGVYILHAKTVLVEALKERILVQINIISNLLEM 543 NE++C+ E + KE ++ + + +L + + + E + +I+I+S + M Sbjct: 13 NEAVCNWIEQLGFPH-KEAFEDYHILGKDIDLLSSNDLRDMGI-ESVGHRIDILSAIQSM 70 Query: 544 TSLSSDHVKSNTRTVNWLKDIKPIFEKNAAAYETFKADMEESLLGKIAYLNKEVTDMTPY 603 D ++ + LK+I+ ++K E D SL ++ YL E T + Sbjct: 71 KKQQKDKLQQENKDQE-LKNIEESYKKLEEKTEHLSDD-NVSLEKRVEYLETENTKLVKT 128 Query: 604 LELLDNMDDVNHTLEYLEYLRKLVHRLHDCDKLVTWINNEETTFKFPVTNYPEL 657 L L++ E+L+ LRK+ + + +L T +++ ++ PV P + Sbjct: 129 LNSLNS--------EFLQLLRKIAINVKEGRQLTTENSSDTSSMTHPVQPSPSV 174 >SPAC343.15 |||tRNA isopentenyltransferase|Schizosaccharomyces pombe|chr 1|||Manual Length = 434 Score = 32.3 bits (70), Expect = 1.4 Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 4/71 (5%) Query: 19 PVMPPVPDIHMMDKLPFTPLPPYNRIKDKQAKFRKILEEKATKRKVEI----ARPLLELY 74 P PP PD H++D P L +I A+ + + +R +EI RP E+Y Sbjct: 127 PSKPPHPDSHILDDDPSAMLSYLKKIDPVMAEQWHPRDTRKIRRSLEIYFHTGRPPSEIY 186 Query: 75 ERDRLVESQSK 85 ++ S SK Sbjct: 187 SEQKMKSSGSK 197 >SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyces pombe|chr 1|||Manual Length = 2104 Score = 32.3 bits (70), Expect = 1.4 Identities = 37/166 (22%), Positives = 75/166 (45%), Gaps = 19/166 (11%) Query: 471 DIIAGIVKGHMAENESICSEFEIIAAKALKEPENATELIEQGVYILHAKTVLVEALKERI 530 D + ++ + + + +E I + L+ + E EQ + H K +LVE R+ Sbjct: 842 DALINNLQNQLESTKEVANELTITKERVLQLTNDLQE--EQA--LAHEKDILVERANSRV 897 Query: 531 LVQINIISNLLEMTSLSSDHVKSNTRTVNWLKDIKPIFEKNAAAYET---FKADMEESLL 587 V +S+L +++ + + +L K E++ A +T + +D+ +L Sbjct: 898 EVVHERLSSLENQVTIADEKYE-------FLYAEKQSIEEDLANKQTEISYLSDLSSTLE 950 Query: 588 GKIAYLNK-EVTDMTPYLEL----LDNMDDVNHTLEYLEYLRKLVH 628 K++ + K E T + Y EL L+ M D H+ ++L L K ++ Sbjct: 951 KKLSSIKKDEQTISSKYKELEKDYLNIMADYQHSSQHLSNLEKAIN 996 >SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces pombe|chr 3|||Manual Length = 1115 Score = 31.9 bits (69), Expect = 1.8 Identities = 28/109 (25%), Positives = 52/109 (47%), Gaps = 9/109 (8%) Query: 339 SHISQRLMPIEQYLKIPYNYDALPVVYNEWLHKDGHERLQQQLNIVFKPLNQYVEKLRQE 398 S + R+ EQ +++ Y L + ++ +K R++QQ L +YVE++ QE Sbjct: 490 SMMVSRMKTQEQSIELTRLYKQLQDIEEDYENK--LMRMEQQWREDVDQLQEYVEEITQE 547 Query: 399 YNMLYGTPAKEALEKFINETEAFEELRNKIK--YYQDIDSNITAVLENE 445 KE L K E++ +EE+ K++ ++I+ + ENE Sbjct: 548 LQ-----DTKEVLSKSSKESDDYEEVVGKLRTEAEREIEKFEKTIRENE 591 >SPBC1539.05 |cog3||Golgi transport complex subunit Cog3 |Schizosaccharomyces pombe|chr 2|||Manual Length = 735 Score = 31.1 bits (67), Expect = 3.2 Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 3/60 (5%) Query: 372 DGHERLQQQLNIVFKPLNQYVEKLRQEYNMLYGTPAKEALEKFINETEAFEELRNKIKYY 431 D + L QQL + +N Y+E Y E++ +F N + F ELR +I Y Sbjct: 616 DTRQELNQQLRVA---VNGYIETAVIHYTECLSIGNLESITEFQNRIQKFPELRQQISLY 672 >SPAC9E9.08 |rad26||ATRIP|Schizosaccharomyces pombe|chr 1|||Manual Length = 614 Score = 30.7 bits (66), Expect = 4.2 Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 7/76 (9%) Query: 2901 REKLIVQGAANRAAL-------KQVEDDILRTLQETKGDILEDESAIEVLDSSKNLAIDI 2953 R L+ Q AN AAL KQ +D+ R L+E K +I ++ + AI+ Sbjct: 96 RANLLKQSEANNAALESLNNSIKQKQDEYQRKLEELKKEIEYAKTKSLFHEREAQDAIET 155 Query: 2954 MKKQEASLETETIIEK 2969 MKK + ++ I++K Sbjct: 156 MKKMKRDVKNSPIMKK 171 >SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces pombe|chr 3|||Manual Length = 1526 Score = 30.7 bits (66), Expect = 4.2 Identities = 30/127 (23%), Positives = 58/127 (45%), Gaps = 14/127 (11%) Query: 613 VNHTLEYLEYLRKLVHRLHDCDKLVTWINNEETTFKFPVTNYPELE-ELKEFIIPFYSLV 671 +N+ E + YL V +L K + +N+++ ++ T ELE ++KE + SL Sbjct: 1071 INNLEEKVNYLEADVKQLPKLKKELESLNDKDQLYQLQATKNKELEAKVKECLNNIKSLT 1130 Query: 672 YLVHRWKRSYYTWMDGPFEYLDHNQIEQDHDFYYKEFLKIS--KNYRNKIKQQIAEGVEK 729 + + D +Y++ +I ++ LK+S +NY+ K EG++ Sbjct: 1131 KELENKEEKCQNLSDASLKYIELQEIHEN------LLLKVSDLENYKKKY-----EGLQL 1179 Query: 730 RFQGLVD 736 +GL D Sbjct: 1180 DLEGLKD 1186 >SPBP16F5.02 |mcs2||cyclin Mcs2|Schizosaccharomyces pombe|chr 2|||Manual Length = 322 Score = 30.7 bits (66), Expect = 4.2 Identities = 32/127 (25%), Positives = 55/127 (43%), Gaps = 9/127 (7%) Query: 546 LSSDHVKSNTRTVNWLKDIKPIFEKNAAAYETFKADMEESLLGKIAYLNKEVTDMTPYLE 605 +S+D + +T +W+ + + + A E F + E +L +++ NKE + LE Sbjct: 1 MSADKFRDSTHYRDWIFTEEDLSKTRAKVNEKFTNIVRERMLEELSLQNKEAS-----LE 55 Query: 606 LLDNMDDVNHTLEYLEYLRKLVHRLHDCDKLVTWINNEETTF--KFPVTNYPELEELKEF 663 +L V LE + Y ++ L L T I + F +F + N + E Sbjct: 56 VLPPTLTVEEELELVNYYSFQLNALSSALSLPTHIRSTAILFFKRFYLIN--SVMEYSPK 113 Query: 664 IIPFYSL 670 II F SL Sbjct: 114 IISFTSL 120 >SPBC839.03c |||neddylation protein Dcn1|Schizosaccharomyces pombe|chr 2|||Manual Length = 251 Score = 30.7 bits (66), Expect = 4.2 Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 1/39 (2%) Query: 356 YNYDALPVVYNEWLHKDGHERLQQQLNIVFKPLNQYVEK 394 YN+D V Y +W+ + E ++QLN VF + +K Sbjct: 30 YNFD-YDVAYTKWIQQKSREEAEKQLNNVFSQFSSKEDK 67 >SPCC24B10.19c |||sequence orphan|Schizosaccharomyces pombe|chr 3|||Manual Length = 455 Score = 30.7 bits (66), Expect = 4.2 Identities = 11/43 (25%), Positives = 26/43 (60%), Gaps = 1/43 (2%) Query: 307 VLNVCLDFDGEFIYDPTLETIYEVFHNIADAISHI-SQRLMPI 348 V N+C+ + + YDP+ YE++ N + ++ + +QR++ + Sbjct: 151 VANLCIQYGSQIFYDPSFRNAYELWSNPSVLLAFLKAQRVLVV 193 >SPAC31G5.14 |gcv1|n313|glycine decarboxylase T subunit|Schizosaccharomyces pombe|chr 1|||Manual Length = 387 Score = 30.3 bits (65), Expect = 5.5 Identities = 15/36 (41%), Positives = 21/36 (58%) Query: 1100 ESLNTHKLSELQAFHSELTKQLNETVAVIRRTDLTK 1135 ES+ L EL+ FHS L+ NET +I T ++K Sbjct: 89 ESITPSSLKELKPFHSTLSAFTNETGGIIDDTIISK 124 >SPAC458.02c |||mRNP complex |Schizosaccharomyces pombe|chr 1|||Manual Length = 468 Score = 30.3 bits (65), Expect = 5.5 Identities = 15/34 (44%), Positives = 20/34 (58%) Query: 362 PVVYNEWLHKDGHERLQQQLNIVFKPLNQYVEKL 395 PV NE LHK+ E L ++N K N++ EKL Sbjct: 6 PVRPNEALHKEALEELDAKINEAKKRFNEHKEKL 39 >SPBP8B7.09c |||karyopherin|Schizosaccharomyces pombe|chr 2|||Manual Length = 978 Score = 29.9 bits (64), Expect = 7.3 Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 1/41 (2%) Query: 416 NETEA-FEELRNKIKYYQDIDSNITAVLENEYFNCAVVCQL 455 +E EA F+E+R K+K +QD ++I + L + Y A+ L Sbjct: 403 SEEEAEFQEMRKKLKIFQDTINSIDSSLFSSYMYSAITSSL 443 >SPBPJ4664.06 |gpt1||UDP-glucose-glycoprotein glucosyltransferase Gpt1|Schizosaccharomyces pombe|chr 2|||Manual Length = 1448 Score = 29.5 bits (63), Expect = 9.6 Identities = 14/40 (35%), Positives = 23/40 (57%) Query: 1910 TTDKLFIYDTIFYGAIAATTDIYDQARENLRPTPAKSHYI 1949 T DK+ I D + +IA++TD+ RE + P +HY+ Sbjct: 272 TPDKIAILDLLATQSIASSTDMLTAFRELTQDFPIYAHYL 311 >SPCC1795.06 |map2||P-factor |Schizosaccharomyces pombe|chr 3|||Manual Length = 201 Score = 29.5 bits (63), Expect = 9.6 Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 3/52 (5%) Query: 1572 MAMSNVMSMIFEVMDLSQASPATVSRCGMIYMESTSLGFMPFYKSWLNTLNP 1623 M ++ V++++F L+ ASP V+ G++ + + F+ Y+SW NP Sbjct: 1 MKITAVIALLFS---LAAASPIPVADPGVVSVSKSYADFLRVYQSWNTFANP 49 >SPCC622.13c |||conserved eukaryotic protein|Schizosaccharomyces pombe|chr 3|||Manual Length = 1098 Score = 29.5 bits (63), Expect = 9.6 Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 1/43 (2%) Query: 306 PVLNVCLDFDGEFIYDPTLETIYEVFHNIADAI-SHISQRLMP 347 P++ + LD D E + + LETIY+V D + S I Q L+P Sbjct: 875 PLVVIQLDTDNELLVECALETIYQVCALADDFMTSRIRQDLLP 917 >SPBC3F6.04c |||U3 snoRNP protein Nop14 |Schizosaccharomyces pombe|chr 2|||Manual Length = 827 Score = 29.5 bits (63), Expect = 9.6 Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 2/59 (3%) Query: 2026 DEKGEVNQENIKKMMFGCYLDTDSAEGERRYEEI-PSKEVFLNIAVSMLSEYNSMHKAK 2083 DE E+N E +++M FG + D+D AE E+ E SK ++ ++ Y + +A+ Sbjct: 169 DEGEELNDEVVRRMHFGGFEDSD-AENEKEGEGAHKSKREVMSEIIAKSKHYKAERQAE 226 Database: spombe Posted date: Oct 3, 2007 3:31 PM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.321 0.137 0.410 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 17,540,867 Number of Sequences: 5004 Number of extensions: 782235 Number of successful extensions: 2272 Number of sequences better than 10.0: 19 Number of HSP's better than 10.0 without gapping: 7 Number of HSP's successfully gapped in prelim test: 12 Number of HSP's that attempted gapping in prelim test: 2214 Number of HSP's gapped (non-prelim): 74 length of query: 3796 length of database: 2,362,478 effective HSP length: 87 effective length of query: 3709 effective length of database: 1,927,130 effective search space: 7147725170 effective search space used: 7147725170 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.8 bits) S2: 63 (29.5 bits)
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