Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001869-TA|BGIBMGA001869-PA|IPR013602|Dynein heavy chain,
N-terminal region 2, IPR011704|ATPase associated with various cellular
activities, AAA-5, IPR004273|Dynein heavy chain
(3796 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0488 - 4070506-4072277,4072455-4072557 36 0.48
11_06_0143 + 20589574-20589684,20590256-20590873,20590943-205910... 36 0.64
03_01_0027 - 250837-250877,250972-252909,253733-253805,254476-25... 35 1.5
09_02_0625 + 11334418-11334499,11335067-11335164,11335758-113358... 34 2.6
02_01_0618 - 4629776-4630037,4630188-4630330,4631200-4631254,463... 33 3.4
12_02_0382 - 18392481-18392525,18392926-18393018,18393149-183932... 33 4.5
04_04_1379 + 33113374-33113529,33114046-33114143,33114811-331148... 33 4.5
03_02_0458 + 8643804-8643904,8643994-8644091,8644206-8644504,864... 33 4.5
02_05_0611 + 30344637-30344652,30344743-30344883,30345258-303455... 33 4.5
11_06_0577 - 25158833-25162864 33 6.0
10_08_0043 - 14390398-14391531,14391850-14393691,14393800-143968... 33 6.0
10_06_0105 - 10790092-10790323,10791092-10791234,10791322-107914... 33 6.0
09_04_0644 + 19181335-19184424 33 6.0
07_03_1353 - 25966332-25966421,25966477-25966528,25966612-259668... 33 6.0
04_04_0987 + 29938486-29938505,29938667-29938859,29938961-29941036 33 6.0
04_01_0308 + 4188726-4190351 33 6.0
10_08_0253 - 16196275-16196307,16196425-16196550,16196643-161967... 32 7.9
>05_01_0488 - 4070506-4072277,4072455-4072557
Length = 624
Score = 36.3 bits (80), Expect = 0.48
Identities = 33/133 (24%), Positives = 64/133 (48%), Gaps = 2/133 (1%)
Query: 476 IVKGHMAENESICSEFEIIAAKALKEPENATELIEQGVYILHAKTVLVEALKE-RILVQI 534
+++ + E E + +FE + K PE L Q L K+VL + +KE V
Sbjct: 376 VLRERVLEFEQLLGDFENSGMEVAKLPETIKNLGAQIEGTLQEKSVLQDRIKELEQAVHD 435
Query: 535 NIISNLLEMTSLSSDHVKSNTRTVNWLKDIKPIFEKNAAAYETFKADMEESLLGKIAYLN 594
++ ++ LE +SLS++ K + + + + + Y+ KA+ + +I+ LN
Sbjct: 436 SLQNHSLEKSSLSAELSKLSEANASLEAKLASVEAELKQVYDE-KANESLNSEKEISRLN 494
Query: 595 KEVTDMTPYLELL 607
+E+ ++ LELL
Sbjct: 495 QELANVKTDLELL 507
>11_06_0143 + 20589574-20589684,20590256-20590873,20590943-20591010,
20591159-20591234,20591311-20591372,20591452-20591603,
20591889-20592052,20592129-20592317,20592417-20592538,
20592620-20592827,20593238-20593291,20593457-20593626,
20594265-20594355,20595405-20595529,20596372-20596444,
20596822-20596914,20597482-20597728,20598305-20598364,
20598461-20598590,20599008-20599014
Length = 939
Score = 35.9 bits (79), Expect = 0.64
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
Query: 1233 GPAGTGKTETTKDLAKALAVQCVVFNCSDGLDYKAMGKFFKGLASCGAWAVRQHLE--TF 1290
GP G GKT T K +++ L +Q + N SD KA K KG+ + ++++ + T
Sbjct: 457 GPPGIGKTTTAKVVSQMLGLQAIEVNASDSRG-KADSKIEKGVGGSTSNSIKELISNATL 515
Query: 1291 DFEGTTLKLNPACYV 1305
++ LK A V
Sbjct: 516 NYSNNRLKRPKAVLV 530
>03_01_0027 - 250837-250877,250972-252909,253733-253805,254476-254555,
255336-255595,255721-255785,256747-256839
Length = 849
Score = 34.7 bits (76), Expect = 1.5
Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 7/90 (7%)
Query: 2336 DLIKSFTTLTNRKQRELRAAKLRYTN-------GLDQLGQAADAVAIMQRDLNALKPQLI 2388
D I S T N Q E+++ + + L Q Q+ + V+ ++ L L+P+L
Sbjct: 635 DEINSLTDSRNELQNEIQSLRSTISQLNTEKDAALFQHQQSVERVSDLESQLLKLQPELE 694
Query: 2389 VMAEKSAKMMQEIEVETAIADKAAAQVRED 2418
+ +K +MQ++E + AD A AQ++++
Sbjct: 695 EIEQKVQMLMQDLEQKRQEADNAHAQLQDE 724
>09_02_0625 +
11334418-11334499,11335067-11335164,11335758-11335831,
11335996-11336598,11336692-11337185,11338035-11338170,
11338417-11338488,11338581-11338652,11339078-11339226,
11340129-11340364,11340567-11340693,11341011-11341079,
11341172-11341361,11341465-11341857,11342084-11342195
Length = 968
Score = 33.9 bits (74), Expect = 2.6
Identities = 14/52 (26%), Positives = 28/52 (53%)
Query: 664 IIPFYSLVYLVHRWKRSYYTWMDGPFEYLDHNQIEQDHDFYYKEFLKISKNY 715
++ S + ++ WK+ G +Y DH I ++ +F Y+E +KI+ N+
Sbjct: 577 VVILISAMLMLLFWKKQAIVKSRGQEQYGDHIHIPENREFTYEELVKITNNF 628
>02_01_0618 - 4629776-4630037,4630188-4630330,4631200-4631254,
4631539-4631603,4631714-4631857,4632141-4632194,
4632363-4632410,4632466-4632541,4632624-4632722,
4633000-4633097,4633615-4633719,4633816-4633924,
4634137-4634252,4634332-4634496
Length = 512
Score = 33.5 bits (73), Expect = 3.4
Identities = 37/152 (24%), Positives = 67/152 (44%), Gaps = 9/152 (5%)
Query: 953 LEKINDGVNNYLEKKRLYFPRFFF-LSNDEMLEILSETKNPL-----KVQPHLKKCFEGI 1006
+E+ ND V + LEK+R Y+ + D EI + T+ + K+Q L KC E
Sbjct: 274 VEEYNDLVTSQLEKQRNYYESLLLEVKEDNEKEIAAATEKAVGIKVQKLQAKLDKCMEET 333
Query: 1007 NRLVFDGEFNISAMISMEGEQVEFLDMISVAAARGSVEKWLVQVEEQMLKAVKSETEISY 1066
+ D N+ + M E+++ + AA R EK + ++EE+ + + + I
Sbjct: 334 G-FLNDIHENLVKNMEMWRERIQKVKEREQAAIRLKDEK-IEKLEEEKILSEDAGFPICP 391
Query: 1067 YDYPNMGRVEWVLSWEGMVVLAISQIYWAVDV 1098
Y P + L+ + V IY+ + +
Sbjct: 392 YPQPPQPHIA-ALTCMPISVFFQDHIYYLITI 422
>12_02_0382 - 18392481-18392525,18392926-18393018,18393149-18393213,
18393363-18393425,18393609-18393705,18395906-18395983,
18396012-18396110
Length = 179
Score = 33.1 bits (72), Expect = 4.5
Identities = 27/133 (20%), Positives = 58/133 (43%), Gaps = 2/133 (1%)
Query: 1121 LNETVAVIRRTDLTKLSSITVKALIVIDVHAKDVISDLIKKKVTEVTDFQWLAQLRYYWE 1180
+N+ + I T +T+ S V+ +I+ H + + + + + +Q+L+ + E
Sbjct: 1 MNKELDSICLTSITRKCSKYVQKFDIIEPHFQQIYEECELATIIGICSYQYLSNVAK--E 58
Query: 1181 EERVYVKIINAVVHYAYEYLGNSDRLVITPLTDRCYRTLIGAYYLHLNGAPEGPAGTGKT 1240
++ +Y+ +N ++ Y+ N D + ++ L + A L NG T
Sbjct: 59 KKIIYLTSLNPYGYWMQRYMQNYDEVELSALGMAIGTVVTVAEILKNNGLATEKKILTST 118
Query: 1241 ETTKDLAKALAVQ 1253
TKD +K V+
Sbjct: 119 IGTKDESKGRLVR 131
>04_04_1379 +
33113374-33113529,33114046-33114143,33114811-33114880,
33116668-33116800,33116981-33118940,33119016-33119076,
33119554-33120057
Length = 993
Score = 33.1 bits (72), Expect = 4.5
Identities = 30/132 (22%), Positives = 61/132 (46%), Gaps = 4/132 (3%)
Query: 508 LIEQGVYILHAKTVLVEALKERILVQINIISNLLEMTSLSSDHVKSNTRTVNWLKDIKPI 567
LI+ ++ + V VE L+ ++ +INII++L S+ + + ++ L + K +
Sbjct: 199 LIKDTAKLISHEQVKVERLEGDVVEKINIIASLDAENRKLSEMLSMKEKMISELTEAKGV 258
Query: 568 FEKNAAAYET--FKAD-MEESLLGKIAYLNKEVTDMTPYLELLDNMDDVNHTLEYLEYLR 624
E N E AD + SL ++ L K++ + + D H ++LE ++
Sbjct: 259 IESNFKNLEVKLESADKLNSSLRYEVCMLQKQLDIRSEERKFNLKSADAAHK-QHLENVK 317
Query: 625 KLVHRLHDCDKL 636
K+ +C +L
Sbjct: 318 KITKLEAECQRL 329
>03_02_0458 + 8643804-8643904,8643994-8644091,8644206-8644504,
8645930-8646460
Length = 342
Score = 33.1 bits (72), Expect = 4.5
Identities = 17/70 (24%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Query: 2914 ALKQVEDDILRTLQETKGDILE-DESAIEVLDSSKNLAIDIMKKQEASLETETIIEKFRL 2972
AL VED ILR +++ + ++ ++ E+ D K LA+++ Q+ + E++I +
Sbjct: 185 ALASVEDKILRKIRDKEAEVENINKRNSELEDQIKQLAVEVGAWQQRAKYNESMINALKY 244
Query: 2973 GYRPIASHSA 2982
+ +H +
Sbjct: 245 NLEQVCAHQS 254
>02_05_0611 + 30344637-30344652,30344743-30344883,30345258-30345572,
30345907-30346053,30346446-30346543,30346719-30346805,
30346870-30347080,30347589-30347674
Length = 366
Score = 33.1 bits (72), Expect = 4.5
Identities = 21/77 (27%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Query: 2006 KKSTRDFMKDTFESALETYQDEKGEVNQENIKKMMFGCYLDTDSAEGERRYE-EIPSKEV 2064
KKS + KD ES+ E D GEV+ N+ ++ +D D + G +++ E K
Sbjct: 161 KKSGKSSKKDKHESSRENKLDRHGEVDTANVDEIQ---SVDEDCSRGMKKWVLEYKQKRP 217
Query: 2065 FLNIAVSMLSEYNSMHK 2081
L + + E+ + H+
Sbjct: 218 GLKVLQQRIDEFITAHE 234
>11_06_0577 - 25158833-25162864
Length = 1343
Score = 32.7 bits (71), Expect = 6.0
Identities = 33/145 (22%), Positives = 69/145 (47%), Gaps = 8/145 (5%)
Query: 2054 RRYEEIPSKEVFLNIAVS----MLSEYNSMHKAKMTIVLFDYALEHLSKICRILSMPSGN 2109
R+ E++ EV ++ VS ML+E + + + V+ D HL K+ +++S SG+
Sbjct: 978 RKIEKMVKMEVMYSVNVSRDGNMLTEIGKLRQLRKLGVVIDDHDGHLRKLLQVISDLSGS 1037
Query: 2110 --ALLVGVGGSGRQSLTRLASTILGQQVFQPEITKSYSVKDWHDDIKLV-LRESGGLNKD 2166
+L + + G+G + T P++ +S S+ D ++L+ L G N++
Sbjct: 1038 LRSLSITLIGTGSEQAPSSEETSADCLKQHPKLLESLSISGVIDKVQLLPLLAIGQGNRN 1097
Query: 2167 -TTFLFTESQIKEESYIQNLDSLLN 2190
+ + +K+E +++ L N
Sbjct: 1098 LAKVTISGTMLKQEDLKKDIAKLHN 1122
>10_08_0043 - 14390398-14391531,14391850-14393691,14393800-14396825,
14397510-14397609
Length = 2033
Score = 32.7 bits (71), Expect = 6.0
Identities = 17/56 (30%), Positives = 34/56 (60%)
Query: 2363 LDQLGQAADAVAIMQRDLNALKPQLIVMAEKSAKMMQEIEVETAIADKAAAQVRED 2418
L Q Q+ + V+ ++ L L+P+L + +K +MQ++E + AD A AQ++++
Sbjct: 449 LFQHQQSVERVSDLESQLLKLQPELEEIEQKVQMLMQDLEQKRQEADSAHAQLQDE 504
>10_06_0105 - 10790092-10790323,10791092-10791234,10791322-10791429,
10791796-10791903,10793133-10797686,10798347-10798461,
10799597-10799724,10799843-10800043,10800158-10800227,
10801233-10801314,10801433-10801556,10801761-10801778
Length = 1960
Score = 32.7 bits (71), Expect = 6.0
Identities = 29/141 (20%), Positives = 59/141 (41%)
Query: 490 EFEIIAAKALKEPENATELIEQGVYILHAKTVLVEALKERILVQINIISNLLEMTSLSSD 549
+F+ + K E+ +L ++ + H + EA ++ ++ ++ S L EM
Sbjct: 1087 DFDAMKEKLNFSEEHMEKLEKELQDMTHKFKISSEAQEKYSIINADLTSRLAEMEGQLQH 1146
Query: 550 HVKSNTRTVNWLKDIKPIFEKNAAAYETFKADMEESLLGKIAYLNKEVTDMTPYLELLDN 609
N V LKDI I E++ T EE+ ++ +K+ M E+
Sbjct: 1147 ITSENEALVEKLKDIAAIVEEHERTKVTLAESEEENKTLTLSLQSKDEAMMQMENEIRSL 1206
Query: 610 MDDVNHTLEYLEYLRKLVHRL 630
D++ + + L ++L+ L
Sbjct: 1207 QDELRSSDDNLLREKRLMEEL 1227
>09_04_0644 + 19181335-19184424
Length = 1029
Score = 32.7 bits (71), Expect = 6.0
Identities = 29/95 (30%), Positives = 44/95 (46%), Gaps = 10/95 (10%)
Query: 2714 PHSEQFVFKDVL---GTDIKIQNWCIAGLPRDLFSIDNAIIQDNSMRWSLLIDPQGQANK 2770
PH + V++++L G IK W IAG P I N +QD+ +++ L+ Q +K
Sbjct: 868 PHYAEHVWRNILRKEGFAIKA-GWPIAGTPDPTLRIANKYLQDSIVKFRKLLQKQESGSK 926
Query: 2771 WIK-----TMEKTNDLQV-LKFTDGNYMKVIETCL 2799
K + N L V L + + NY E CL
Sbjct: 927 KPKKGTAPPPSEQNKLTVGLVYVNENYYGWKEQCL 961
>07_03_1353 - 25966332-25966421,25966477-25966528,25966612-25966803,
25966900-25967199,25967816-25967925,25968696-25968755,
25968835-25968906,25969172-25969348,25969845-25969898,
25970188-25970217,25970985-25971026
Length = 392
Score = 32.7 bits (71), Expect = 6.0
Identities = 21/107 (19%), Positives = 52/107 (48%), Gaps = 5/107 (4%)
Query: 958 DGVNNYLEKKRLYFPRFFFLSND-----EMLEILSETKNPLKVQPHLKKCFEGINRLVFD 1012
D + + +E R+Y P + ++ E LEIL + + + HL+ +G+ ++++
Sbjct: 239 DDLIDVIEGSRIYMPCIYVVNKIDQITLEELEILDKLPHYCPISAHLEWNLDGLLEMIWE 298
Query: 1013 GEFNISAMISMEGEQVEFLDMISVAAARGSVEKWLVQVEEQMLKAVK 1059
+ +G ++ D + V++ + +VE + ++ + M+K K
Sbjct: 299 YLDLVRIYTKPKGLNPDYEDPVIVSSKKKTVEDFCNRIHKDMVKQFK 345
>04_04_0987 + 29938486-29938505,29938667-29938859,29938961-29941036
Length = 762
Score = 32.7 bits (71), Expect = 6.0
Identities = 24/98 (24%), Positives = 48/98 (48%), Gaps = 3/98 (3%)
Query: 2373 VAIMQRDLNALKPQLIVMAEKSAKMMQEIEVETAIADKAAAQVRED-QKXXXXXXXXXXE 2431
+A +Q++L K +L+ ++ K++ E+E AD+A A+++E E
Sbjct: 109 LAAVQQELVKAKEELVEKEKERGKVLDELERAKRAADEANAKLQEALAAQSKAAEESAAE 168
Query: 2432 LKKDCEADLALAL--PILEDAIAALNTLKPADITIVKS 2467
D EA+ A A L +A++ + + AD+ ++S
Sbjct: 169 QSGDAEAEQASASMEDELRTKLASMQSQQEADMAALRS 206
>04_01_0308 + 4188726-4190351
Length = 541
Score = 32.7 bits (71), Expect = 6.0
Identities = 55/237 (23%), Positives = 105/237 (44%), Gaps = 25/237 (10%)
Query: 324 LETIYEVFHNIADAISHISQRLMPIEQYLK--IPYNYDALPVVYNEWLHKDGHERLQQQL 381
LE EV A++ + +M LK I N + +V +E +++L+ ++
Sbjct: 228 LEVAMEVKEAAAESFDAEKEEIMKQSNNLKRKIEENQASKDLVESE------NDKLRSKM 281
Query: 382 NIVFKPLNQYV---EKLRQEYNMLYGTPAKEALEKFINETEA--FEELRNKIKYYQDIDS 436
V + NQ+ + L+ E L AKEA K + +A +EL + + ++I +
Sbjct: 282 VTVKQKHNQFEADNKSLKIELGAL--KEAKEATAKAFDVEKAGILKELEDPKRKVEEIQA 339
Query: 437 NITAV-LENEYFNCAVVCQLRMVDGLKSRALEFVNDIIAGIVKGHMAENESICSEFEIIA 495
V EN+ F V+ + K++A ++ A +V+ E+ F++
Sbjct: 340 KKDLVERENDKFQLEVLTGEQKQSKSKAKAKSLKVELSA-LVEA----KEATAKAFDVEK 394
Query: 496 AKALKEPENATELIEQGVYILHAKTVLVEALKERILVQINIISNLLEMTSLSSDHVK 552
AK +KE E+ + +E+ + K LVE K+++ ++I I+ M L +K
Sbjct: 395 AKIMKELEDLKKKVEE----IQGKKDLVEGEKDKLWLEILIVEQKHSMYELEVKRLK 447
>10_08_0253 - 16196275-16196307,16196425-16196550,16196643-16196741,
16196822-16197001,16197090-16197371,16197471-16199141,
16199257-16199463,16199566-16199700,16199792-16200082,
16200403-16200621,16200876-16201034,16201120-16201181,
16201257-16201383,16201460-16201693,16201777-16202003,
16202163-16202257,16202341-16202468,16202574-16202594,
16202765-16202921,16203007-16203075,16203228-16203341,
16203415-16203491,16203576-16203688,16204432-16204507,
16204592-16204756,16204825-16204952,16205049-16205130,
16205426-16205548,16205633-16205860,16205933-16206034,
16206144-16206341,16206581-16206760,16206868-16207020,
16207690-16207797,16208201-16208355,16208786-16208912,
16209825-16209914,16209986-16210127,16210303-16210379,
16210467-16210582,16210638-16210773,16211130-16211198,
16211279-16211361,16211655-16211720,16211788-16211974,
16212054-16213547,16213635-16214165,16214234-16214363,
16214407-16215878,16216359-16216364,16216750-16217055,
16217364-16217468,16217577-16217772,16217862-16217929,
16218853-16220631,16221026-16221151,16221604-16221780,
16221997-16222128,16223461-16223498,16223710-16223788,
16224175-16224284,16224787-16224935,16225027-16225197,
16225281-16225552,16226355-16226442,16227942-16228369
Length = 5157
Score = 32.3 bits (70), Expect = 7.9
Identities = 13/22 (59%), Positives = 18/22 (81%)
Query: 1800 KYLKPLLLIGPTGTGKSFYVQN 1821
K+ +P+LL+G TGTGK+ VQN
Sbjct: 515 KFNEPVLLVGETGTGKTTLVQN 536
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.321 0.137 0.410
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,347,726
Number of Sequences: 37544
Number of extensions: 4496902
Number of successful extensions: 10364
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 10321
Number of HSP's gapped (non-prelim): 58
length of query: 3796
length of database: 14,793,348
effective HSP length: 97
effective length of query: 3699
effective length of database: 11,151,580
effective search space: 41249694420
effective search space used: 41249694420
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 70 (32.3 bits)
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