Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001869-TA|BGIBMGA001869-PA|IPR013602|Dynein heavy chain,
N-terminal region 2, IPR011704|ATPase associated with various cellular
activities, AAA-5, IPR004273|Dynein heavy chain
(3796 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 30 0.42
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 28 1.3
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 28 1.3
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 28 1.3
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 27 2.2
AF393497-1|AAL60422.1| 143|Apis mellifera odorant binding prote... 27 2.9
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 27 3.9
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 26 6.8
AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase prot... 26 6.8
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 26 6.8
AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase pro... 26 6.8
AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 26 6.8
AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 26 6.8
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 29.9 bits (64), Expect = 0.42
Identities = 26/78 (33%), Positives = 37/78 (47%), Gaps = 5/78 (6%)
Query: 3717 QLPKVLNDNMPVIWLYPKLKNEFNEGTRYKCPLYKTLERKGVLATTGHSSNFVLAFYLPS 3776
++P V N+ P L FN R K L+ T+ ++ G S VL FYLPS
Sbjct: 210 EVPAVRNEKFYTCCDEPYLDITFNITMRRKT-LFYTVNL--IIPCMGISFLTVLVFYLPS 266
Query: 3777 DKPSAHWIKRSVALLLQL 3794
D S + S+++LL L
Sbjct: 267 D--SGEKVSLSISILLSL 282
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 28.3 bits (60), Expect = 1.3
Identities = 24/78 (30%), Positives = 34/78 (43%), Gaps = 5/78 (6%)
Query: 3717 QLPKVLNDNMPVIWLYPKLKNEFNEGTRYKCPLYKTLERKGVLATTGHSSNFVLAFYLPS 3776
++P V N+ P L FN R K Y ++ G S VL FYLPS
Sbjct: 214 EVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTV---NIIIPCMGISFLTVLTFYLPS 270
Query: 3777 DKPSAHWIKRSVALLLQL 3794
D S + S+++L+ L
Sbjct: 271 D--SGEKVTLSISILISL 286
Score = 25.8 bits (54), Expect = 6.8
Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 5/62 (8%)
Query: 1689 RTWFLASLMTAIVWGLGGILNTDSREKFDDLVKEYFKGEKGIPSKIERIDVSIPAE-GML 1747
R WFL++L+ + + G N D++ +DDL+ Y K + + + + + V I + L
Sbjct: 10 RVWFLSALV--VHGAVAG--NPDAKRLYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQL 65
Query: 1748 ID 1749
ID
Sbjct: 66 ID 67
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 28.3 bits (60), Expect = 1.3
Identities = 24/78 (30%), Positives = 34/78 (43%), Gaps = 5/78 (6%)
Query: 3717 QLPKVLNDNMPVIWLYPKLKNEFNEGTRYKCPLYKTLERKGVLATTGHSSNFVLAFYLPS 3776
++P V N+ P L FN R K Y ++ G S VL FYLPS
Sbjct: 214 EVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTV---NIIIPCMGISFLTVLTFYLPS 270
Query: 3777 DKPSAHWIKRSVALLLQL 3794
D S + S+++L+ L
Sbjct: 271 D--SGEKVTLSISILISL 286
Score = 25.8 bits (54), Expect = 6.8
Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 5/62 (8%)
Query: 1689 RTWFLASLMTAIVWGLGGILNTDSREKFDDLVKEYFKGEKGIPSKIERIDVSIPAE-GML 1747
R WFL++L+ + + G N D++ +DDL+ Y K + + + + + V I + L
Sbjct: 10 RVWFLSALV--VHGAVAG--NPDAKRLYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQL 65
Query: 1748 ID 1749
ID
Sbjct: 66 ID 67
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 28.3 bits (60), Expect = 1.3
Identities = 15/43 (34%), Positives = 25/43 (58%)
Query: 545 SLSSDHVKSNTRTVNWLKDIKPIFEKNAAAYETFKADMEESLL 587
+L+S V+SNT +N LK +K + KN+ + K D+ L+
Sbjct: 328 TLTSISVESNTMFINILKFLKQKYVKNSKLEKVIKHDILRMLI 370
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 27.5 bits (58), Expect = 2.2
Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 5/78 (6%)
Query: 3717 QLPKVLNDNMPVIWLYPKLKNEFNEGTRYKCPLYKTLERKGVLATTGHSSNFVLAFYLPS 3776
++P V N+ + P FN R K L+ T+ ++ G S VL FYLPS
Sbjct: 206 KVPAVRNEAFYICCEEPYPDIVFNITLRRKT-LFYTVNL--IIPCVGISFLSVLVFYLPS 262
Query: 3777 DKPSAHWIKRSVALLLQL 3794
D S + S+++LL L
Sbjct: 263 D--SGEKVSLSISILLSL 278
>AF393497-1|AAL60422.1| 143|Apis mellifera odorant binding protein
ASP5 protein.
Length = 143
Score = 27.1 bits (57), Expect = 2.9
Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 3/90 (3%)
Query: 550 HVKSNTR--TVNWLKDIKPIFEKNAAAYETFKADMEESLLGKIAYLNKEVTDMTPYLELL 607
HVKS T+ +KP+ +A E +M +S L KIA + +E+ D E
Sbjct: 2 HVKSVLLLITIVTFVALKPVKSMSADQVEKLAKNMRKSCLQKIA-ITEELVDGMRRGEFP 60
Query: 608 DNMDDVNHTLEYLEYLRKLVHRLHDCDKLV 637
D+ D +T ++ LR + D D +V
Sbjct: 61 DDHDLQCYTTCIMKLLRTFKNGNFDFDMIV 90
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 26.6 bits (56), Expect = 3.9
Identities = 11/35 (31%), Positives = 19/35 (54%)
Query: 1458 LVGNPFSGKSMTLKVLSEALSLIHERNQPDGCECT 1492
++G P +G ++ E S+ HE NQP +C+
Sbjct: 848 VIGTPSTGMMYKPFLIPEQTSISHENNQPTMNKCS 882
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 25.8 bits (54), Expect = 6.8
Identities = 28/119 (23%), Positives = 51/119 (42%), Gaps = 7/119 (5%)
Query: 1103 NTHKLSELQA-FHSELTKQLNETVAVIRRTDLTKLSSITVKALIVIDVHAKDVISDLIKK 1161
+T ++E Q+ FH T NE + + +T+ +T+ A +++ + L
Sbjct: 97 DTFFVNEKQSYFHIATTS--NEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCH- 153
Query: 1162 KVTEVTDFQW-LAQLRYYWEEERVYVKIINAVVHYAYEYLGNSDRLVITPLTDRCYRTL 1219
E+ F + + +RY W E V + N V ++ LG+ R + LT Y L
Sbjct: 154 --IEIESFGYTMRDIRYKWNEGPNSVGVSNEVSLPQFKVLGHRQRAMEISLTTGNYSRL 210
>AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase
protein.
Length = 693
Score = 25.8 bits (54), Expect = 6.8
Identities = 13/41 (31%), Positives = 20/41 (48%)
Query: 30 MDKLPFTPLPPYNRIKDKQAKFRKILEEKATKRKVEIARPL 70
+DK P T P N I+ K K + + T R ++ RP+
Sbjct: 528 LDKFPITLQPGKNTIEQKSTKSSVTIPFERTFRNLDENRPI 568
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl subunit
protein.
Length = 365
Score = 25.8 bits (54), Expect = 6.8
Identities = 28/119 (23%), Positives = 51/119 (42%), Gaps = 7/119 (5%)
Query: 1103 NTHKLSELQA-FHSELTKQLNETVAVIRRTDLTKLSSITVKALIVIDVHAKDVISDLIKK 1161
+T ++E Q+ FH T NE + + +T+ +T+ A +++ + L
Sbjct: 36 DTFFVNEKQSYFHIATTS--NEFIRIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCH- 92
Query: 1162 KVTEVTDFQW-LAQLRYYWEEERVYVKIINAVVHYAYEYLGNSDRLVITPLTDRCYRTL 1219
E+ F + + +RY W E V + N V ++ LG+ R + LT Y L
Sbjct: 93 --IEIESFGYTMRDIRYKWNEGPNSVGVSNEVSLPQFKVLGHRQRAMEISLTTGNYSRL 149
>AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase
protein.
Length = 588
Score = 25.8 bits (54), Expect = 6.8
Identities = 21/87 (24%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Query: 354 IPYNYDALPVVYNEW-LHKDGHERLQQQLNIVFKPLNQYVEKLRQEYNMLYGTPAKE-AL 411
+P+ +++ + +E L K+ + L LN +L +E+ A+E
Sbjct: 232 VPHLFESANISLDEPPLGKNLNLSLHASLNHTLTKDQPETYELVKEWRDFVDNYAEENKR 291
Query: 412 EKFINETEAFEELRNKIKYYQDIDSNI 438
++ + TEA+ L N +KYY ++ SN+
Sbjct: 292 DEIVLLTEAYSSLENTLKYY-EVGSNV 317
>AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein.
Length = 429
Score = 25.8 bits (54), Expect = 6.8
Identities = 16/51 (31%), Positives = 23/51 (45%)
Query: 1725 KGEKGIPSKIERIDVSIPAEGMLIDHFYMYKGKGCWKTWPDAVKAVQVKEQ 1775
+G G+PS I + +S P G L+ Y C KT + + KEQ
Sbjct: 343 QGSAGLPSAILAMRLSHPLHGNLLPPGVCYTCDVCGKTLSTKLTLKRHKEQ 393
>AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein.
Length = 554
Score = 25.8 bits (54), Expect = 6.8
Identities = 10/28 (35%), Positives = 14/28 (50%)
Query: 621 EYLRKLVHRLHDCDKLVTWINNEETTFK 648
E+L KL+ C + + W N E FK
Sbjct: 462 EFLLKLLQDREYCPRYIKWTNRERGVFK 489
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.321 0.137 0.410
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,091,521
Number of Sequences: 429
Number of extensions: 49207
Number of successful extensions: 124
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 111
Number of HSP's gapped (non-prelim): 21
length of query: 3796
length of database: 140,377
effective HSP length: 72
effective length of query: 3724
effective length of database: 109,489
effective search space: 407737036
effective search space used: 407737036
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 53 (25.4 bits)
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