GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001868-TA|BGIBMGA001868-PA|undefined
         (251 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    23   1.7  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    22   3.9  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    22   3.9  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    22   3.9  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    21   6.8  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   6.8  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    21   6.8  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   9.0  

>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 13/44 (29%), Positives = 23/44 (52%), Gaps = 1/44 (2%)

Query: 187 VVMLIIPFFVNILIFWVTDNFLMYHPRGVSTKIKTKVRYQSIKK 230
           ++  I P  + I+++ +    LM+HP  + T  KT +  QS  K
Sbjct: 243 LIFFIFPLAILIIVYILIAKTLMHHPVAM-TGTKTVMPSQSAIK 285


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 10/34 (29%), Positives = 16/34 (47%)

Query: 211 HPRGVSTKIKTKVRYQSIKKEKSGSEEDEHSADE 244
           H + +S  ++   R Q I+K      +D H  DE
Sbjct: 15  HIKQISKWLRGSARAQEIQKRSELDSKDGHVIDE 48


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 10/34 (29%), Positives = 16/34 (47%)

Query: 211 HPRGVSTKIKTKVRYQSIKKEKSGSEEDEHSADE 244
           H + +S  ++   R Q I+K      +D H  DE
Sbjct: 15  HIKQISKWLRGSARAQEIQKRSELDSKDGHVIDE 48


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 10/34 (29%), Positives = 16/34 (47%)

Query: 211 HPRGVSTKIKTKVRYQSIKKEKSGSEEDEHSADE 244
           H + +S  ++   R Q I+K      +D H  DE
Sbjct: 15  HIKQISKWLRGSARAQEIQKRSELDSKDGHVIDE 48


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 6/20 (30%), Positives = 12/20 (60%)

Query: 29  QIILAVLAFTCLIGKRFCEP 48
           + ++  LAF  ++   FC+P
Sbjct: 85  EFLIVALAFQVILNSCFCDP 104


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 8/18 (44%), Positives = 12/18 (66%)

Query: 192 IPFFVNILIFWVTDNFLM 209
           I FF  +L++ +TD  LM
Sbjct: 159 IHFFYQLLLYLITDMILM 176


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 6/20 (30%), Positives = 12/20 (60%)

Query: 29  QIILAVLAFTCLIGKRFCEP 48
           + ++  LAF  ++   FC+P
Sbjct: 85  EFLIVALAFQVILNSCFCDP 104


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 8/28 (28%), Positives = 12/28 (42%)

Query: 202 WVTDNFLMYHPRGVSTKIKTKVRYQSIK 229
           W      +  PR +  KIK + R+   K
Sbjct: 14  WFLSKLFLLCPRSIDEKIKRQERHSFYK 41


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.327    0.139    0.464 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 60,472
Number of Sequences: 317
Number of extensions: 2300
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 4
Number of HSP's gapped (non-prelim): 8
length of query: 251
length of database: 114,650
effective HSP length: 55
effective length of query: 196
effective length of database: 97,215
effective search space: 19054140
effective search space used: 19054140
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.7 bits)
S2: 42 (21.0 bits)