GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001868-TA|BGIBMGA001868-PA|undefined
         (251 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-4358|AAN14166.1|  177|Drosophila melanogaster CG14507-P...    31   1.5  
AY089248-1|AAL89986.1|  742|Drosophila melanogaster AT03371p pro...    31   2.0  
AE014296-1169|AAF50630.1|  742|Drosophila melanogaster CG10064-P...    31   2.0  

>AE014297-4358|AAN14166.1|  177|Drosophila melanogaster CG14507-PB
           protein.
          Length = 177

 Score = 31.1 bits (67), Expect = 1.5
 Identities = 12/30 (40%), Positives = 18/30 (60%)

Query: 116 CARVYDIPLINFGEYGKPPMCSAWICQCIL 145
           C R   +  ++ GE+G P  C+A +CQC L
Sbjct: 115 CYRGKPLCAVDHGEFGGPDSCAARLCQCDL 144


>AY089248-1|AAL89986.1|  742|Drosophila melanogaster AT03371p
           protein.
          Length = 742

 Score = 30.7 bits (66), Expect = 2.0
 Identities = 24/73 (32%), Positives = 32/73 (43%), Gaps = 2/73 (2%)

Query: 63  SKQGLGALIIHAANVWLSPHLTGNPCTWYI--VNFMLDSTLGLLIIWAGIRLAQHCARVY 120
           SKQG  + I+ A         TG  C  Y+  V  +     G L+I AG    +      
Sbjct: 240 SKQGSTSCILGAFGTHNPRKPTGRDCNRYVNGVRALYVLEGGRLLIGAGNGDIELVEERT 299

Query: 121 DIPLINFGEYGKP 133
           D+PLINF +Y  P
Sbjct: 300 DVPLINFRDYPGP 312


>AE014296-1169|AAF50630.1|  742|Drosophila melanogaster CG10064-PA
           protein.
          Length = 742

 Score = 30.7 bits (66), Expect = 2.0
 Identities = 24/73 (32%), Positives = 32/73 (43%), Gaps = 2/73 (2%)

Query: 63  SKQGLGALIIHAANVWLSPHLTGNPCTWYI--VNFMLDSTLGLLIIWAGIRLAQHCARVY 120
           SKQG  + I+ A         TG  C  Y+  V  +     G L+I AG    +      
Sbjct: 240 SKQGSTSCILGAFGTHNPRKPTGRDCNRYVNGVRALYVLEGGRLLIGAGNGDIELVEERT 299

Query: 121 DIPLINFGEYGKP 133
           D+PLINF +Y  P
Sbjct: 300 DVPLINFRDYPGP 312


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.327    0.139    0.464 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,785,415
Number of Sequences: 52641
Number of extensions: 434587
Number of successful extensions: 1096
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 1095
Number of HSP's gapped (non-prelim): 3
length of query: 251
length of database: 24,830,863
effective HSP length: 83
effective length of query: 168
effective length of database: 20,461,660
effective search space: 3437558880
effective search space used: 3437558880
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.7 bits)
S2: 61 (28.7 bits)