Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001866-TA|BGIBMGA001866-PA|IPR006020|Phosphotyrosine
interaction region
(1322 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g55660.1 68418.m06940 expressed protein similar to unknown pr... 40 0.008
At1g59540.1 68414.m06694 kinesin motor protein-related similar t... 36 0.14
At5g46840.1 68418.m05771 RNA recognition motif (RRM)-containing ... 36 0.18
At2g42480.1 68415.m05255 meprin and TRAF homology domain-contain... 36 0.24
At2g22795.1 68415.m02704 expressed protein 36 0.24
At4g27890.1 68417.m04003 nuclear movement family protein contain... 35 0.32
At1g26110.1 68414.m03186 expressed protein 35 0.32
At5g44800.1 68418.m05492 chromodomain-helicase-DNA-binding famil... 35 0.42
At3g14010.1 68416.m01769 hydroxyproline-rich glycoprotein family... 35 0.42
At3g15950.1 68416.m02017 DNA topoisomerase-related similar to DN... 34 0.55
At5g67470.1 68418.m08507 formin homology 2 domain-containing pro... 33 0.97
At4g39680.1 68417.m05614 SAP domain-containing protein contains ... 33 0.97
At2g38040.2 68415.m04670 acetyl co-enzyme A carboxylase carboxyl... 33 0.97
At2g38040.1 68415.m04669 acetyl co-enzyme A carboxylase carboxyl... 33 0.97
At1g31440.1 68414.m03850 SH3 domain-containing protein 1 (SH3P1)... 33 0.97
At5g24880.1 68418.m02946 expressed protein ; expression supporte... 33 1.3
At4g34400.1 68417.m04886 transcriptional factor B3 family protei... 33 1.3
At4g03200.1 68417.m00437 expressed protein contains Pfam PF03190... 33 1.3
At4g04900.1 68417.m00713 p21-rho-binding domain-containing prote... 33 1.7
At2g03160.1 68415.m00269 E3 ubiquitin ligase SCF complex subunit... 33 1.7
At1g22670.1 68414.m02833 protease-associated zinc finger (C3HC4-... 33 1.7
At1g18190.1 68414.m02262 expressed protein similar to golgin-84 ... 33 1.7
At1g15240.1 68414.m01824 phox (PX) domain-containing protein wea... 33 1.7
At5g62760.1 68418.m07878 nuclear protein ZAP-related similar to ... 32 2.2
At5g04970.1 68418.m00526 pectinesterase, putative contains simil... 32 2.2
At4g15650.1 68417.m02385 protein kinase-related contains weak si... 32 2.2
At1g06530.1 68414.m00692 myosin heavy chain-related similar to m... 32 2.2
At3g58840.1 68416.m06558 expressed protein 32 2.9
At3g28770.1 68416.m03591 expressed protein 32 2.9
At1g69830.1 68414.m08034 alpha-amylase, putative / 1,4-alpha-D-g... 32 2.9
At1g69610.1 68414.m08006 expressed protein 32 2.9
At1g64110.2 68414.m07264 AAA-type ATPase family protein contains... 32 2.9
At1g64110.1 68414.m07263 AAA-type ATPase family protein contains... 32 2.9
At1g30690.1 68414.m03752 SEC14 cytosolic factor family protein /... 32 2.9
At5g10430.1 68418.m01209 arabinogalactan-protein (AGP4) identica... 31 3.9
At2g45000.1 68415.m05603 expressed protein contains Pfam profile... 31 3.9
At1g58210.1 68414.m06610 kinase interacting family protein simil... 31 3.9
At5g46300.1 68418.m05700 expressed protein 31 5.2
At4g37450.1 68417.m05301 arabinogalactan-protein (AGP18) identic... 31 5.2
At3g28510.1 68416.m03561 AAA-type ATPase family protein contains... 31 5.2
At3g25500.1 68416.m03171 formin homology 2 domain-containing pro... 31 5.2
At3g15120.1 68416.m01913 AAA-type ATPase family protein contains... 31 5.2
At1g77500.1 68414.m09025 expressed protein contains Pfam domains... 31 5.2
At1g48760.2 68414.m05457 delta-adaptin, putative similar to SP|O... 31 5.2
At1g48760.1 68414.m05456 delta-adaptin, putative similar to SP|O... 31 5.2
At1g18950.1 68414.m02358 aminoacyl-tRNA synthetase family contai... 31 5.2
At1g13330.1 68414.m01547 expressed protein similar to nuclear re... 31 5.2
At5g57200.1 68418.m07145 epsin N-terminal homology (ENTH) domain... 31 6.8
At5g16730.1 68418.m01959 expressed protein weak similarity to mi... 31 6.8
At5g07820.1 68418.m00896 expressed protein 31 6.8
At1g53590.1 68414.m06088 C2 domain-containing protein 31 6.8
At1g21680.1 68414.m02713 expressed protein similar to TolB prote... 31 6.8
At5g37010.1 68418.m04438 expressed protein 30 9.0
At4g36690.3 68417.m05206 U2 snRNP auxiliary factor large subunit... 30 9.0
At4g36690.2 68417.m05207 U2 snRNP auxiliary factor large subunit... 30 9.0
At4g36690.1 68417.m05205 U2 snRNP auxiliary factor large subunit... 30 9.0
At4g32760.1 68417.m04661 VHS domain-containing protein / GAT dom... 30 9.0
At3g19020.1 68416.m02415 leucine-rich repeat family protein / ex... 30 9.0
At2g22530.1 68415.m02672 phosphatidylinositolglycan-related simi... 30 9.0
At1g76970.1 68414.m08962 VHS domain-containing protein / GAT dom... 30 9.0
At1g75260.1 68414.m08743 isoflavone reductase family protein sim... 30 9.0
At1g72160.1 68414.m08343 SEC14 cytosolic factor family protein /... 30 9.0
At1g67120.1 68414.m07636 midasin-related similar to Midasin (MID... 30 9.0
At1g65010.1 68414.m07368 expressed protein similar to endosome-a... 30 9.0
At1g48380.1 68414.m05404 root hair initiation protein root hairl... 30 9.0
At1g23540.1 68414.m02960 protein kinase family protein contains ... 30 9.0
>At5g55660.1 68418.m06940 expressed protein similar to unknown
protein (pir||T08929)
Length = 778
Score = 40.3 bits (90), Expect = 0.008
Identities = 40/202 (19%), Positives = 88/202 (43%), Gaps = 10/202 (4%)
Query: 586 EKETSISIIPRKLDSTIPSAPEASTDFKPQFEDDFAPSTETNGTFVANFDDFDKKANPSF 645
EKE + R + P+A +S+ + + +T TN VA+ DD ++
Sbjct: 478 EKEKGVKR-KRTPKKSSPAAGSSSSKRSAKSQKKTEEATRTNKKSVAHSDDESEEEKEDD 536
Query: 646 DRYAVFREIQEQELKAKSILDPSDGEIDNKTDSDCKELTAIDDLIKSKQD-REETKELSK 704
+ +E++E+E + ++ I +K++ + +L+ ++ ++S+++ EETK+ +
Sbjct: 537 EEEEKEQEVEEEE-------EENENGIPDKSEDEAPQLSESEENVESEEESEEETKKKKR 589
Query: 705 SPLKSLDELTLDSFNMFRKSVSPKPSQIEAKIEDIKSVMKSLQIDKTRGSVSPRDSNGTV 764
S D+ + +K+ P S K +S K + D SP+ S+
Sbjct: 590 GSRTSSDKKESAGKSRSKKTAVPTKSSPPKKATQKRSAGKRKKSDDD-SDTSPKASSKRK 648
Query: 765 EIKLEDSSDRYAALREITITEP 786
+ + A L+ ++ +P
Sbjct: 649 KTEKPAKEQAAAPLKSVSKEKP 670
>At1g59540.1 68414.m06694 kinesin motor protein-related similar to
kinesin motor protein (kin2) GI:2062751 from (Ustilago
maydis)
Length = 823
Score = 36.3 bits (80), Expect = 0.14
Identities = 26/113 (23%), Positives = 54/113 (47%), Gaps = 2/113 (1%)
Query: 672 IDNKTDSDCKELTAIDDLIKSKQDREETKELSKSPLKSLDELTLDSFNMFRKSVSPKPSQ 731
+ N T + A D+ + S +ET L + LKS + + +N K +
Sbjct: 664 LKNTTTLLLSDAQAKDEFLNSHNKGQETAALEEKKLKSELIIIKERYNELEKELCLDKQL 723
Query: 732 IEAKIEDIKSVMKSLQ-IDKTRGSVSPRDSNGTVEIKLEDSSDRYAALREITI 783
+EA E + ++K +Q + + R S+ + S T +++ +SD+ AL+++ +
Sbjct: 724 LEASRESHEKLIKEVQFLKEERDSLDRKISQSTQRLRV-IASDKENALKDLNV 775
>At5g46840.1 68418.m05771 RNA recognition motif (RRM)-containing
protein contains InterPro entry IPR000504: RNA-binding
region RNP-1 (RNA recognition motif) (RRM)
Length = 501
Score = 35.9 bits (79), Expect = 0.18
Identities = 32/137 (23%), Positives = 52/137 (37%), Gaps = 2/137 (1%)
Query: 651 FREIQEQELKAKSILDPSDGEIDNKTDSDCKELTAIDDLIKSKQDREETKELSKSPLKSL 710
FR Q QE+K SI D G+ N + + +E T D +K+K+ ++E K K
Sbjct: 45 FRRKQPQEIKESSIPDEKKGDKRNAENEEEEEET--DLPVKTKKSKKEKKLTDSGDEKET 102
Query: 711 DELTLDSFNMFRKSVSPKPSQIEAKIEDIKSVMKSLQIDKTRGSVSPRDSNGTVEIKLED 770
++ + K K +IE + E K ++ K D + E
Sbjct: 103 ISEAVEESGLVSKRKKRKRDEIENEYETKKYGSVEMKEKKVGEKRKKADEVADTMVSKEG 162
Query: 771 SSDRYAALREITITEPP 787
D LR + + P
Sbjct: 163 FDDESKLLRTVFVGNLP 179
>At2g42480.1 68415.m05255 meprin and TRAF homology domain-containing
protein / MATH domain-containing protein similar to
ubiquitin-specific protease 12 [Arabidopsis thaliana]
GI:11993471; contains Pfam profile PF00917: MATH domain
Length = 743
Score = 35.5 bits (78), Expect = 0.24
Identities = 25/105 (23%), Positives = 55/105 (52%), Gaps = 3/105 (2%)
Query: 667 PSDGEIDNKTDSDCKELTA-IDDLIKSKQDREETKELSKSPLKSLDELTLDSFNMFRKSV 725
P D +I + D D E I++ +K+ + E +L K LDE++L+ +
Sbjct: 243 PLDNKIADDDDDDYDEWEQDIEERLKNLEGMEFDSKLDSLKSK-LDEISLERKKSYDADG 301
Query: 726 SPKPSQIEAKIEDIKSVMKSLQIDKTRGSVSPRDSNGTVEIKLED 770
S + Q+E +++DI+ ++KS + + D++G++E ++++
Sbjct: 302 S-RVQQLEERVKDIELILKSKLEEVSSEKKKKADADGSLEDRVKN 345
>At2g22795.1 68415.m02704 expressed protein
Length = 734
Score = 35.5 bits (78), Expect = 0.24
Identities = 50/229 (21%), Positives = 88/229 (38%), Gaps = 9/229 (3%)
Query: 584 KTEK-ETSI--SIIPRKLDSTIPSAPEASTDFKPQFEDDFAPSTETNGTFVANFDDFDKK 640
KTE+ E S+ S++P D+ S+ E ST E D ++ G + + +K+
Sbjct: 335 KTEEVEDSVIKSVLPNTTDNGESSSDEKSTGSSSGHESDSLEGIKSEGESMEKNELLEKE 394
Query: 641 ANPSFDRYAVF-REIQEQELKAKSILDPSDGEIDNKTDSDCKELTAIDDLIKSKQDREET 699
N S +V + + ++ + S E +S+ K+ +SK ET
Sbjct: 395 FNDSNGESSVTGKSTGSGDGGSQETSEVSSQEESKGKESETKDKEESSSQEESKDRETET 454
Query: 700 KELSKSPLKSLDELTLDSFNMFRKSVSPKPSQIEAKIEDIKSVMKSLQIDKTRGSVSPRD 759
KE +S S E T+D ++ V + E K L+ K + +
Sbjct: 455 KEKEES---SSQEETMDKETEAKEKVESSSQEKNEDKETEKIESSFLEETKEKEDETKEK 511
Query: 760 SNGTVEIKLEDSSDRYAALREITITEPPDEFESLPPEIPKERKKSDEKS 808
+ + K E+ E + E + E+ +I KE S E+S
Sbjct: 512 EESSSQEKTEEKETETKDNEESSSQEETKDKEN--EKIEKEEASSQEES 558
>At4g27890.1 68417.m04003 nuclear movement family protein contains
Pfam profile: PF03593 nuclear movement protein
Length = 293
Score = 35.1 bits (77), Expect = 0.32
Identities = 42/162 (25%), Positives = 67/162 (41%), Gaps = 11/162 (6%)
Query: 675 KTDSDCKELTAIDDLIKSKQDREETKELSKSPLKSLDELTLDSFNMFRKSVSPKPSQIEA 734
K D+ KE+ A K + E K+L K +KS+ E+ + + + KP +
Sbjct: 45 KKDTAEKEIVAAVMAAKQRLREAEKKKLEKESVKSM-EVEKPKKDSLKPTELEKPKEESL 103
Query: 735 KIEDIKSVMKSLQIDKTRGSVSPRDSNGTVEIKLEDSSDRYAALREITITEPPDE---FE 791
D + K + +K G + P NG K + L+E+TI P E
Sbjct: 104 MATDPMEIEKPKE-EKESGPIVPNKGNGLDFEKYSWGQN----LQEVTINIPMPEGTKSR 158
Query: 792 SLPPEIPKERKKSDEK-SDGFDNSDFFDCIDNSSLSFTHVED 832
S+ EI K R K K D + +FF+ + F ++ED
Sbjct: 159 SVTCEIKKNRLKVGLKGQDLIVDGEFFNSVKPDD-CFWNIED 199
>At1g26110.1 68414.m03186 expressed protein
Length = 611
Score = 35.1 bits (77), Expect = 0.32
Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 14/87 (16%)
Query: 240 PPPPSGAST-RGRSTPATQRSTF----SPSKTAPTTLPFDIVP---ASSDLETT----PA 287
PPPP+G+S+ +G S P S F S AP++LPF +P SS L++T P+
Sbjct: 217 PPPPTGSSSLQGSSLPEAPSSLFPFSTSSQMLAPSSLPFPGLPPVTLSSSLQSTLQSAPS 276
Query: 288 PIVDSVCEQPV--SQAGTGAAQTLGYD 312
P + S P+ ++A A TL D
Sbjct: 277 PSLASEMAPPLLSNKAPITAPPTLPQD 303
>At5g44800.1 68418.m05492 chromodomain-helicase-DNA-binding family
protein / CHD family protein similar to chromatin
remodeling factor CHD3 (PICKLE) [Arabidopsis thaliana]
GI:6478518; contains Pfam profiles PF00271: Helicase
conserved C-terminal domain, PF00176: SNF2 family
N-terminal domain, PF00628: PHD-finger, PF00385: 'chromo'
(CHRromatin Organization MOdifier)
Length = 2228
Score = 34.7 bits (76), Expect = 0.42
Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Query: 442 RADEPKTVPKD-SALEKLEPSLEGARNVFNGPLQVSLPPEPAPKSPRLQRQADRKTKPRL 500
++ EP T+P SA+ + L G + P + PP PAP+ PR + RK K
Sbjct: 1982 KSPEPPTLPPTVSAIAQSVRVLYGEDSTTIPPFVIPEPPPPAPRDPRHSLRKKRKRKLHS 2041
Query: 501 SSAGT 505
SS T
Sbjct: 2042 SSQKT 2046
>At3g14010.1 68416.m01769 hydroxyproline-rich glycoprotein family
protein similar to Mrs16p (GI:2737884) [Saccharomyces
cerevisiae]; weak similarity to ataxin-2 related protein
(GI:1679686) [Homo sapiens]
Length = 595
Score = 34.7 bits (76), Expect = 0.42
Identities = 32/125 (25%), Positives = 54/125 (43%), Gaps = 9/125 (7%)
Query: 169 EKLTKTNSSGDANTTGSKTTESGAEGGVAELVDLEQELSSLRRGLTQVEGLTPSTDPFGD 228
E+++ N S + +T+G + GA+ G + + ++ R +QV T S FG
Sbjct: 372 EEVSHNNRSAEESTSGHGDIKEGAKSG-GGASSVSKAVTEREREASQVSSKTKSESSFGQ 430
Query: 229 SFIVTSQKGLLPPPPSGASTRGRSTPATQRSTFSPSKTA--PTTLPFDIVPASSD---LE 283
S S+ P PS +S G S ++ S S K+ P F + P + L+
Sbjct: 431 S---ASRSSESRPGPSTSSRPGLSPSSSIGSMASSEKSTLNPNAKEFKLNPKAKSFKPLQ 487
Query: 284 TTPAP 288
+ AP
Sbjct: 488 SAAAP 492
>At3g15950.1 68416.m02017 DNA topoisomerase-related similar to DNA
topoisomerase IV subunit A (GI:26454107) [Mycoplasma
penetrans]
Length = 772
Score = 34.3 bits (75), Expect = 0.55
Identities = 45/171 (26%), Positives = 77/171 (45%), Gaps = 26/171 (15%)
Query: 655 QEQELKAKSILDPSDGEIDNKTDSDCKELTAIDDLIKSKQDREETKELS---------KS 705
+EQ+ K +S+LD + E + T+S K+L I D K++ D E K S ++
Sbjct: 296 KEQDAKRQSMLDAIEREFEAVTES-FKQLEDIAD-NKAEGDDESAKRQSMLDEIEREFEA 353
Query: 706 PLKSLDELTLDSFNMFRKSV--SPKPSQIEAKIEDIKSVMKSLQIDKTRGSVSPRDSNGT 763
SL +L LD F+ S + + S +EA + ++ K L+ + DS G
Sbjct: 354 ATNSLKQLNLDDFSEGDDSAESARRNSMLEAIEREFEAATKGLE------ELKANDSTG- 406
Query: 764 VEIKLEDSSDRYAALREITITEPPDEFESLPPEIPKERKKSDEKSDGFDNS 814
+ D + A R+I + EFE+ + +E K E+++ NS
Sbjct: 407 -----DKDDDEHVARRKIMLEAIEREFEAATKGL-EELKNESEQAENKRNS 451
>At5g67470.1 68418.m08507 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 899
Score = 33.5 bits (73), Expect = 0.97
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 5/74 (6%)
Query: 868 PERVSTGSISDVVSG---SSPDTKVQTSSSSRDVSPWDE--DLPPVTRLPRPPSHHRDRE 922
P RVS + +G SSP K+ ++ S P E LPP+ + P+P +
Sbjct: 177 PTRVSASESNGGTNGPVNSSPYRKLNSAKRSERYRPSPELQPLPPLAKPPQPSDNSPSAL 236
Query: 923 SRHNSSGSRECLDS 936
S +SS EC D+
Sbjct: 237 SPSSSSSGEECRDT 250
>At4g39680.1 68417.m05614 SAP domain-containing protein contains
Pfam domain PF02037: SAP domain
Length = 633
Score = 33.5 bits (73), Expect = 0.97
Identities = 27/92 (29%), Positives = 38/92 (41%), Gaps = 6/92 (6%)
Query: 198 ELVDLEQELSSLRRGLTQVEGLTPSTDPFGDSFIVTSQKGLLPPPPSGASTRGRSTPATQ 257
E + EQE S T + +P V + P P A+ +TP T
Sbjct: 46 EALRAEQEESERINSATVAAAEKANQEPQMFPVTVGDRNQTTPVTPVEAAFSTETTPVTA 105
Query: 258 RSTFSPSKTAPTTLPFDIVPASSDLETTPAPI 289
T P++T TT AS+ +ETTPAP+
Sbjct: 106 EKTPEPTQTKITT------EASAGVETTPAPV 131
>At2g38040.2 68415.m04670 acetyl co-enzyme A carboxylase
carboxyltransferase alpha subunit family contains Pfam
profile: PF03255: Acetyl co-enzyme A carboxylase
carboxyltransferase alpha subunit
Length = 769
Score = 33.5 bits (73), Expect = 0.97
Identities = 27/131 (20%), Positives = 65/131 (49%), Gaps = 5/131 (3%)
Query: 693 KQDREETKELSKSPLKSLDELTLDSFNMFRKSVSPKPSQIEAKIEDIKSVMKSLQIDKTR 752
KQ++++T E + ++L E L+ N + ++ K ++ + +IKS+++ L+++ +
Sbjct: 631 KQNQKDTAEQIYAANENLQE-KLEKLN---QEITSKIEEV-VRTPEIKSMVELLKVETAK 685
Query: 753 GSVSPRDSNGTVEIKLEDSSDRYAALREITITEPPDEFESLPPEIPKERKKSDEKSDGFD 812
S +P + +I+ + + + + ++ + L E+ R+ + E+SDG
Sbjct: 686 ASKTPGVTEAYQKIEALEQQIKQKIAEALNTSGLQEKQDELEKELAAARELAAEESDGSV 745
Query: 813 NSDFFDCIDNS 823
D D D+S
Sbjct: 746 KEDDDDDEDSS 756
>At2g38040.1 68415.m04669 acetyl co-enzyme A carboxylase
carboxyltransferase alpha subunit family contains Pfam
profile: PF03255: Acetyl co-enzyme A carboxylase
carboxyltransferase alpha subunit
Length = 769
Score = 33.5 bits (73), Expect = 0.97
Identities = 27/131 (20%), Positives = 65/131 (49%), Gaps = 5/131 (3%)
Query: 693 KQDREETKELSKSPLKSLDELTLDSFNMFRKSVSPKPSQIEAKIEDIKSVMKSLQIDKTR 752
KQ++++T E + ++L E L+ N + ++ K ++ + +IKS+++ L+++ +
Sbjct: 631 KQNQKDTAEQIYAANENLQE-KLEKLN---QEITSKIEEV-VRTPEIKSMVELLKVETAK 685
Query: 753 GSVSPRDSNGTVEIKLEDSSDRYAALREITITEPPDEFESLPPEIPKERKKSDEKSDGFD 812
S +P + +I+ + + + + ++ + L E+ R+ + E+SDG
Sbjct: 686 ASKTPGVTEAYQKIEALEQQIKQKIAEALNTSGLQEKQDELEKELAAARELAAEESDGSV 745
Query: 813 NSDFFDCIDNS 823
D D D+S
Sbjct: 746 KEDDDDDEDSS 756
>At1g31440.1 68414.m03850 SH3 domain-containing protein 1 (SH3P1)
nearly identical to SH3 domain-containing protein 1
[Arabidopsis thaliana] GI:16974676; contains Pfam
profile PF00018: SH3 domain
Length = 439
Score = 33.5 bits (73), Expect = 0.97
Identities = 45/232 (19%), Positives = 90/232 (38%), Gaps = 11/232 (4%)
Query: 582 STKTEKETSISIIPRK----LDSTIPSAPEASTDFKPQFEDDFAPSTETNGTFVANFDDF 637
S + E+ET + ++ + + + I SAP D E T V
Sbjct: 116 SVEGERETLLGVLSEQVCEPIRTMIYSAPLEDARHLVNHYDRLRQEVEAQATDVLRRRSK 175
Query: 638 DKKANPSFDRYAVFREIQEQELKAKSILDPSDGEIDNKT-DSDCKELTAIDDLIKSKQDR 696
K+++ S + Y + + + + KS + E + D ++ +++ +
Sbjct: 176 LKESDISEEAYIKLKNSESRLAELKSSMKTLGKEATKAMLEVDDQQQNVTSQRLRALVEA 235
Query: 697 EETKELSKSPLKSLDELTLDSFNMFRKSVSPKPSQIEAKIEDIKSVMKSLQIDKTRGSVS 756
E + ++ L LD+L + +++ P + IED S+ + + G +
Sbjct: 236 E--RSYHRNALDILDKLHSEMIAE-EEAIGSSPKSLPLHIEDSASLPQQEPNSNSSGEIK 292
Query: 757 PRDSNGTVEIKLEDSSDRYAALREITITEPPDEFESLPPEIPKERKKSDEKS 808
SN +IK + + +E+T P DE +S P E K + + KS
Sbjct: 293 ---SNPLGKIKASRREEIKSNPQEVTKPSPKDEMKSSPQEETKSNHQKEIKS 341
>At5g24880.1 68418.m02946 expressed protein ; expression supported
by MPSS
Length = 443
Score = 33.1 bits (72), Expect = 1.3
Identities = 30/125 (24%), Positives = 58/125 (46%), Gaps = 9/125 (7%)
Query: 594 IPRKLDSTIPSAPEASTDFKPQFEDDFAPSTETNGTFVANFDDFDKKANPSFDRYAVFRE 653
+ K +S+ P+ P AS P +D A E + N DD ++K ++
Sbjct: 243 VEEKAESSGPT-PVAS----PVGKDCNAVVAELEEKLIKNEDDIEEKTEEMKEQDNNQAN 297
Query: 654 IQEQELKAKSILDPSDGEIDNKTDSDCKELTAIDDLIKSKQD--REETKELSKSPLKSLD 711
E+E K +D + E K D++ KE+ ++++ + K++ +EE KE + K +
Sbjct: 298 KSEEEEDVKKKID--ENETPEKVDTESKEVESVEETTQEKEEEVKEEGKERVEEEEKEKE 355
Query: 712 ELTLD 716
++ D
Sbjct: 356 KVKED 360
>At4g34400.1 68417.m04886 transcriptional factor B3 family protein
contains Pfam profile PF02362: B3 DNA binding domain
Length = 389
Score = 33.1 bits (72), Expect = 1.3
Identities = 16/47 (34%), Positives = 24/47 (51%)
Query: 769 EDSSDRYAALREITITEPPDEFESLPPEIPKERKKSDEKSDGFDNSD 815
E+ Y+ E T T+ EF+ P IPK +KK +K ++SD
Sbjct: 168 EEEDSVYSESSEETETDTDSEFKVAKPTIPKSQKKGKKKEQVVESSD 214
>At4g03200.1 68417.m00437 expressed protein contains Pfam PF03190:
Protein of unknown function, DUF255
Length = 818
Score = 33.1 bits (72), Expect = 1.3
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 533 LLTCSMDELALRLRVPAATLSSMTLPQLTEYL-RSYLAADNDRAHIHVEPSTKTEKE 588
L+ CS D +++ R + S + P+LT L ++ D ++ IH++PS+ E E
Sbjct: 714 LMCCSADMISVPSRKQVVLVGSKSSPELTNMLSAAHSVYDPNKTVIHIDPSSSDEIE 770
>At4g04900.1 68417.m00713 p21-rho-binding domain-containing protein
contains Pfam PF00786: P21-Rho-binding domain
Length = 156
Score = 32.7 bits (71), Expect = 1.7
Identities = 20/63 (31%), Positives = 26/63 (41%)
Query: 868 PERVSTGSISDVVSGSSPDTKVQTSSSSRDVSPWDEDLPPVTRLPRPPSHHRDRESRHNS 927
P S S SS T SS R +S D+PPVT + P ++ + R S
Sbjct: 69 PSSFSNARPSTSFFTSSSSTDFDQGSSQRGISDTLRDIPPVTPINLPKNNKKKSSRRKKS 128
Query: 928 SGS 930
S S
Sbjct: 129 SSS 131
>At2g03160.1 68415.m00269 E3 ubiquitin ligase SCF complex subunit
SKP1/ASK1 (At19), putative E3 ubiquitin ligase; similar
to Skp1 GI:4959710 from [Medicago sativa]
Length = 200
Score = 32.7 bits (71), Expect = 1.7
Identities = 24/90 (26%), Positives = 44/90 (48%), Gaps = 6/90 (6%)
Query: 546 RVPAATLSSMTLPQLTEYLRSYLAADNDRAHIHVEPSTKTEKETSISIIPRKLDSTIPSA 605
++P ++ L ++ EY + ++ D+D H E STK +K ++ +K D +
Sbjct: 41 KIPIPNVTGEILAKVIEYCKKHVEDDDDVVETH-ESSTKGDK--TVEEAKKKPDDV--AV 95
Query: 606 PEASTDFKPQFEDDFAPSTETNGTFVANFD 635
PE ST+ + ED E + F+ +FD
Sbjct: 96 PE-STEGDDEAEDKKEKLNEWDAKFMKDFD 124
>At1g22670.1 68414.m02833 protease-associated zinc finger
(C3HC4-type RING finger) family protein contains Pfam
domain, PF02225: protease-associated (PA) domain and
Pfam domain, PF00097: Zinc finger, C3HC4 type (RING
finger); similar to ReMembR-H2 protein JR702
[Arabidopsis thaliana] gi|6942149|gb|AAF32326
Length = 422
Score = 32.7 bits (71), Expect = 1.7
Identities = 30/115 (26%), Positives = 48/115 (41%), Gaps = 7/115 (6%)
Query: 214 TQVEGLTPSTDPFGDSFIVTSQKGLLPPPPSGASTRGRSTPATQRSTFSPSKTAPTTLPF 273
T E L + PF S I TS + PP G+S +PA S+F + P
Sbjct: 280 TADEPLATESTPFLSSSIATSSLVCIDSPPLGSSV--SFSPAHVSSSFIHQFVRSS--PM 335
Query: 274 DIVPASSDLETTPAPIVDSVCEQPVSQAGTGAAQTLGYDVFTELDPLGTGRSKPY 328
+ S +L +P+ S +S ++ +LGY + L+ +G +PY
Sbjct: 336 NGSRISENLRRQASPLQSSSQRSHLSMK---SSHSLGYSTMSPLNAMGMSPYRPY 387
>At1g18190.1 68414.m02262 expressed protein similar to golgin-84
{Homo sapiens} (GI:4191344)
Length = 668
Score = 32.7 bits (71), Expect = 1.7
Identities = 25/112 (22%), Positives = 52/112 (46%), Gaps = 4/112 (3%)
Query: 666 DPSDGEIDNKTDSDCKELTAIDDLIKSKQDREETKELS-KSPLKSLDELTLDSFNMFRKS 724
+PSD E+ + +D+D K A D+ + +E K++S K+P LD+ + +
Sbjct: 187 EPSDKEVSSPSDADMKNRNAPRDIFVNSTHKESEKDVSGKTP--PLDDSRRSANETLPRE 244
Query: 725 VSPKPSQIEAKIEDIKSVM-KSLQIDKTRGSVSPRDSNGTVEIKLEDSSDRY 775
SP + + + SV K ++ + ++ +VS + + ++S Y
Sbjct: 245 TSPSVGKRDGRESRRSSVWGKQVREEVSQSNVSDGLTRKESSLSSDESESDY 296
>At1g15240.1 68414.m01824 phox (PX) domain-containing protein weak
similarity to SP|Q9Y5W8 Sorting nexin 13 {Homo sapiens};
contains Pfam profiles PF00787: PX domain, PF02194: PXA
domain
Length = 706
Score = 32.7 bits (71), Expect = 1.7
Identities = 15/31 (48%), Positives = 20/31 (64%)
Query: 691 KSKQDREETKELSKSPLKSLDELTLDSFNMF 721
KS D++ KELSK PL S+D + S+N F
Sbjct: 342 KSATDKQHVKELSKDPLLSMDTRSSRSWNSF 372
>At5g62760.1 68418.m07878 nuclear protein ZAP-related similar to
nuclear protein ZAP, Mus musculus, EMBL:AB033168 this
cDNA provides a truncated ORF likely due to a skipped
exon. An alternative ORF is provided.
Length = 661
Score = 32.3 bits (70), Expect = 2.2
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 8/87 (9%)
Query: 653 EIQEQELKAKSILDPSDGEIDNKTDSDCKELTAIDDLIKSKQD------REETKELSKSP 706
EIQE ++ + + + DN T S+ K T +SK D EE KELS+S
Sbjct: 479 EIQEVDMDMEDDFGLPERKSDNSTQSEEKGATEGSYKSESKWDAESGSRTEEVKELSRSK 538
Query: 707 LKSLDE-LTLDSFNMFRKSVS-PKPSQ 731
+++E T +S +M R S S PK SQ
Sbjct: 539 WSNVEEDETENSQSMRRNSKSLPKSSQ 565
>At5g04970.1 68418.m00526 pectinesterase, putative contains
similarity to pectinesterase from Vitis vinifera
GI:15081598, Prunus persica SP|Q43062; contains Pfam
profile PF01095 pectinesterase
Length = 624
Score = 32.3 bits (70), Expect = 2.2
Identities = 34/135 (25%), Positives = 54/135 (40%), Gaps = 8/135 (5%)
Query: 221 PSTDPFGDSFIVTSQKGLLPP--PPSGASTRGRSTPATQRSTFSPSKTAPTTLPFDIVPA 278
PS P +SQ PP PP+ T+ S P TQ T PS++ P +P
Sbjct: 28 PSQPPSHPPIQPSSQPPTQPPSQPPTQPPTQPPSHPPTQPPTPPPSQSPSQPSP---LPP 84
Query: 279 SSDLETTPAPIVDSVCEQPVSQAGTGAAQTLGYDVFTELDPLGTGRSKPYVDKKFFFQDL 338
+ ++TP P +C +S + + Y FT L R V +F +
Sbjct: 85 NIACKSTPYP---KLCRTILSAVKSSPSDPYHYGKFTMKQCLKQARRLSKVINRFAQRVE 141
Query: 339 KNPPKKVLKDLVPVA 353
+P ++++ VA
Sbjct: 142 ADPGTSTVEEVSAVA 156
>At4g15650.1 68417.m02385 protein kinase-related contains weak
similarity to protein kinase [Dictyostelium discoideum]
gi|551446|emb|CAA86053
Length = 258
Score = 32.3 bits (70), Expect = 2.2
Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 9/100 (9%)
Query: 673 DNKTDSDCKELTAIDDLIKSKQDREETKELSKSPLKSLDEL------TLDSFNMFRKSVS 726
+ + DC E A+D+ KQ E+ S P+ +++ + T ++ N +SVS
Sbjct: 71 EKEDGGDCSEEMAVDNANGDKQPEEKETAASFPPVTAVEAIVPENIVTEETVNDVNESVS 130
Query: 727 PKPSQIEAKIEDIKSVMKSLQI-DKTRGSVSPRDSNGTVE 765
P Q E KI DI +V++ + D+ G V ++ VE
Sbjct: 131 PVEEQKE-KI-DIDTVVEEKSVEDEKDGDVDTEIASSEVE 168
>At1g06530.1 68414.m00692 myosin heavy chain-related similar to
myosin heavy chain (GI:1408194) {Placopecten
magellanicus}; similar to Myosin heavy chain, clone 203
(Fragment) (SP:P39922){Hydra attenuata}; contains one
transmembrane domain
Length = 323
Score = 32.3 bits (70), Expect = 2.2
Identities = 32/126 (25%), Positives = 56/126 (44%), Gaps = 7/126 (5%)
Query: 693 KQDREETKELSKSPLKSLDELTLDSFNM-FR--KSVSPKPSQIEAKIEDIKSVMKSLQID 749
K++ E+ + +S L +L+ LD N FR + + K E ++ D+K +KSL+ D
Sbjct: 160 KEENEKRMKELESKLGALEVKELDEKNKKFRAEEEMREKIDNKEKEVHDLKEKIKSLESD 219
Query: 750 KTRGSVSPR---DSNGTVEIKLEDSSDRYAALREITITEPPDEFESLPPEIPKERKKSDE 806
+G + VE L+DS + AL E I E + + I + +E
Sbjct: 220 VAKGKTELQKWITEKMVVEDSLKDSEKKVVAL-ESEIVELQKQLDDAEKMINGLKNVVEE 278
Query: 807 KSDGFD 812
+G +
Sbjct: 279 PLNGIE 284
>At3g58840.1 68416.m06558 expressed protein
Length = 318
Score = 31.9 bits (69), Expect = 2.9
Identities = 29/113 (25%), Positives = 52/113 (46%), Gaps = 5/113 (4%)
Query: 653 EIQEQELKAKSILDPSD-GEIDNKTDSDCKEL--TAIDDLIKSKQDREETKELSKSPLKS 709
E++E E K+K + + EID++ + +EL T I ++ ++ EE K+ K
Sbjct: 169 EVREMEEKSKKLRSEEEMREIDDEKKREIEELQKTVIVLNLELVKNVEELKKWKSK--KK 226
Query: 710 LDELTLDSFNMFRKSVSPKPSQIEAKIEDIKSVMKSLQIDKTRGSVSPRDSNG 762
L E L K + K ++ K+E+ + +L + S RD+NG
Sbjct: 227 LTEEALSETQKREKELELKKDELLKKVEEGNKTVFALNERTMKPSNGVRDTNG 279
>At3g28770.1 68416.m03591 expressed protein
Length = 2081
Score = 31.9 bits (69), Expect = 2.9
Identities = 33/162 (20%), Positives = 68/162 (41%), Gaps = 11/162 (6%)
Query: 650 VFREIQEQELKAKSILDPSDGEI--DNKTDSDCKELTAIDDLIKSKQDREETKELSKSPL 707
V E+++QE K + ++ +NK + + KE + K++ EE K +K
Sbjct: 967 VNNELKKQEDNKKETTKSENSKLKEENKDNKEKKESEDSASKNREKKEYEEKKSKTKEEA 1026
Query: 708 KSLDELTLDSFNMFRKSVSPKPSQIEAKIEDIKSVMKSLQIDKTRGSVSPRDSNGTVEIK 767
K + + D + S K + + + D+K+ K + + + S + + + +
Sbjct: 1027 KKEKKKSQDKKREEKDSEERKSKKEKEESRDLKAKKKEEETKEKKESENHKSKKKEDKKE 1086
Query: 768 LEDSSDRYAALREITITEPPDEFESLPPEIPKERKKSDEKSD 809
ED+ ++ + D+ E E K RKK ++K D
Sbjct: 1087 HEDNK---------SMKKEEDKKEKKKHEESKSRKKEEDKKD 1119
>At1g69830.1 68414.m08034 alpha-amylase, putative /
1,4-alpha-D-glucan glucanohydrolase, putative similar to
SP|P17859 Alpha-amylase precursor (EC 3.2.1.1)
(1,4-alpha-D-glucan glucanohydrolase) {Vigna mungo},
alpha-amylase [Malus x domestica] GI:7532799; contains
Pfam profile PF00128: Alpha amylase, catalytic domain
Length = 887
Score = 31.9 bits (69), Expect = 2.9
Identities = 31/123 (25%), Positives = 64/123 (52%), Gaps = 13/123 (10%)
Query: 688 DLIKSKQDREETKELSKSPLKSLDELTLDSFNMFRKSVSPKPSQ---IEAKIE--DIK-- 740
D+ K + KE+ ++ L+ +++L +++++FR S +P S+ +EA+ + DIK
Sbjct: 430 DISSHKNQKTNVKEVQENILQEIEKLAAEAYSIFR-STTPAFSEEGVLEAEADKPDIKIS 488
Query: 741 -SVMKSLQIDKTRGSVSPRDSNGTVEIKLEDSSDRYAALREITITEPPDEFESLPPE--I 797
+I +G + +G ++L++ +D A+L + PP ES+ PE +
Sbjct: 489 SGTGSGFEI-LCQGFNWESNKSGRWYLELQEKADELASLGFTVLWLPPPT-ESVSPEGYM 546
Query: 798 PKE 800
PK+
Sbjct: 547 PKD 549
>At1g69610.1 68414.m08006 expressed protein
Length = 636
Score = 31.9 bits (69), Expect = 2.9
Identities = 25/103 (24%), Positives = 44/103 (42%), Gaps = 3/103 (2%)
Query: 671 EIDNKTDSDCKELTAIDDLIKSKQDREETKELSKSPLKSLDELTLDSFNMFRKSVSPKPS 730
E D+ +DSD E D + K K + + + E L + + PKP
Sbjct: 249 EFDDGSDSDDDEFEHSDVIEKLKTELRTARTGGLCTILEESETPLQELKPLK--IEPKPD 306
Query: 731 QIEAKIEDIKSVMKSLQIDKTRGSVSPRDSNGTVE-IKLEDSS 772
Q + +I +I V K+ + + V + ++ +KL+DSS
Sbjct: 307 QHKDRIAEIHKVYKNYAVKMRKLDVIDSQTMHSISLLKLKDSS 349
>At1g64110.2 68414.m07264 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family
Length = 829
Score = 31.9 bits (69), Expect = 2.9
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 7/59 (11%)
Query: 579 VEPSTKTEKETSISIIPR-----KLDSTIPSAPEASTD--FKPQFEDDFAPSTETNGTF 630
++P TKTE T++S K + P APE + D F+ + + P+ E N TF
Sbjct: 462 IKPETKTESVTTVSSKEEPEKEAKAEKVTPKAPEVAPDNEFEKRIRPEVIPAEEINVTF 520
>At1g64110.1 68414.m07263 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family
Length = 824
Score = 31.9 bits (69), Expect = 2.9
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 7/59 (11%)
Query: 579 VEPSTKTEKETSISIIPR-----KLDSTIPSAPEASTD--FKPQFEDDFAPSTETNGTF 630
++P TKTE T++S K + P APE + D F+ + + P+ E N TF
Sbjct: 457 IKPETKTESVTTVSSKEEPEKEAKAEKVTPKAPEVAPDNEFEKRIRPEVIPAEEINVTF 515
>At1g30690.1 68414.m03752 SEC14 cytosolic factor family protein /
phosphoglyceride transfer family protein contains Pfam
PF00650 : CRAL/TRIO domain; contains Pfam PF03765 :
CRAL/TRIO, N-terminus; similar to cytosolic factor
(Phosphatidylinositol/phosphatidylcholine transfer
protein) (PI/PCTP) (SP:P24280) [Saccharomyces
cerevisiae]; ESTs gb|T76582, gb|N06574 and gb|Z25700
come from this gene
Length = 540
Score = 31.9 bits (69), Expect = 2.9
Identities = 17/46 (36%), Positives = 22/46 (47%)
Query: 316 ELDPLGTGRSKPYVDKKFFFQDLKNPPKKVLKDLVPVAQSLISDAT 361
E P G +S + ++ FF DLK KK L DL + I D T
Sbjct: 42 ESKPEGVEKSASFKEESDFFADLKESEKKALSDLKSKLEEAIVDNT 87
>At5g10430.1 68418.m01209 arabinogalactan-protein (AGP4) identical
to gi_3883126_gb_AAC77826
Length = 135
Score = 31.5 bits (68), Expect = 3.9
Identities = 19/67 (28%), Positives = 26/67 (38%), Gaps = 3/67 (4%)
Query: 240 PPPPSGASTRGRSTPATQRSTFSPSKTAPTTLPFDIVPASSDLETTPAPIVDSVCEQPVS 299
PPP + PAT +P AP T P + P+ +D+ T P + P S
Sbjct: 43 PPPVATPPPAATPAPATPPPAATP---APATTPPSVAPSPADVPTASPPAPEGPTVSPSS 99
Query: 300 QAGTGAA 306
G A
Sbjct: 100 APGPSDA 106
>At2g45000.1 68415.m05603 expressed protein contains Pfam profile:
PF05064 Nsp1-like C-terminal region
Length = 739
Score = 31.5 bits (68), Expect = 3.9
Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
Query: 212 GLTQVEGLTPSTDPF-GDSFIVTSQKGLLPPPPSGASTRGRSTPATQRSTFSPSKTAPTT 270
GL T ST+ F G + TS P + + S P++ +T + +A TT
Sbjct: 450 GLASSTPATGSTNSFTGFAVPKTSTPASSSQPQTTSPAFSFSLPSSTSTTAPATSSATTT 509
Query: 271 LPFDIVPASSDLETTPAPIVDS 292
+VP+SS T AP+ S
Sbjct: 510 QTTLVVPSSSGTSTAVAPVAGS 531
>At1g58210.1 68414.m06610 kinase interacting family protein similar to
kinase interacting protein 1 (GI:13936326) {Petunia
integrifolia}
Length = 1246
Score = 31.5 bits (68), Expect = 3.9
Identities = 25/96 (26%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
Query: 686 IDDLIKSKQDREETKELSKSPLKSLDELTLDSFNMFRKSVSPKPSQIEAKIEDIKSVMKS 745
+DD ++K E K ++ + ++ E L+ + F SV + + + ++D+KS +
Sbjct: 984 VDDSPRTKIPTVEDKV--RADIDAVLEENLEFWLRFSTSVH-QIQKYQTTVQDLKSELSK 1040
Query: 746 LQIDKTRGSVSPRDSNGTVEIKLEDSSDRYAALREI 781
L+I+ + SPR S+ T ++ Y LREI
Sbjct: 1041 LRIESKQQQESPRSSSNTA--VASEAKPIYRHLREI 1074
>At5g46300.1 68418.m05700 expressed protein
Length = 208
Score = 31.1 bits (67), Expect = 5.2
Identities = 21/89 (23%), Positives = 44/89 (49%), Gaps = 7/89 (7%)
Query: 670 GEIDNKTDSDCKELTAIDDLIKSKQDREETKELSKSPLKSLDELTLDSFNMFRKSVSPKP 729
GE+ K + K + +++++ +Q R+E K + K + E +D N+ +
Sbjct: 4 GEMSTKETTTLKLIPGYENVMELEQRRQELKAVEKRMENVIGEKEIDDLNL------TEL 57
Query: 730 SQIEAKIEDIKSV-MKSLQIDKTRGSVSP 757
+ E K+EDI+S+ +K L+ + + P
Sbjct: 58 IEFEKKLEDIQSLQLKKLEKIPWKDMIQP 86
>At4g37450.1 68417.m05301 arabinogalactan-protein (AGP18) identical
to gi_11935088_gb_AAG41964
Length = 209
Score = 31.1 bits (67), Expect = 5.2
Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 6/56 (10%)
Query: 243 PSGASTRGRSTPA--TQRSTFSPSKTAPTTLP--FDIVPASSDLET--TPAPIVDS 292
P + T+ +TP+ T T SP+ T+PTT P ASS +E+ +PAP+ +S
Sbjct: 24 PISSPTKSPTTPSAPTTSPTKSPAVTSPTTAPAKTPTASASSPVESPKSPAPVSES 79
>At3g28510.1 68416.m03561 AAA-type ATPase family protein contains
Pfam profile: PF00004 ATPase family
Length = 530
Score = 31.1 bits (67), Expect = 5.2
Identities = 27/139 (19%), Positives = 59/139 (42%), Gaps = 5/139 (3%)
Query: 638 DKKANPSFDRYAVFREIQEQELKAKSILDPSDGEIDNKTDSDCKELTAIDDLIKSKQDRE 697
D S+ ++ F+ + + L+ ++ GEI+ K + + + + K D E
Sbjct: 387 DNHIEMSYCKFEAFKVLAKNYLEIET--HDLYGEIERKLEETDMSPADVAETLMPKSDEE 444
Query: 698 ETKELSKSPLKSLDELTLDSFNMF---RKSVSPKPSQIEAKIEDIKSVMKSLQIDKTRGS 754
+ K +K+L+E + + K + K ++ K E+ + K + D+ +
Sbjct: 445 DADICIKRLVKTLEEEKEKARKLAEEEEKKKAEKEAKKMKKAEEAEEKKKKTEEDEKKEK 504
Query: 755 VSPRDSNGTVEIKLEDSSD 773
V ++ NG V + +S D
Sbjct: 505 VKAKEENGNVSQQNGNSID 523
>At3g25500.1 68416.m03171 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 1051
Score = 31.1 bits (67), Expect = 5.2
Identities = 13/36 (36%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 478 PPEPAPKSPRLQRQADRKTKPRLSSAGTNSSEDEYL 513
PP PA +P +R A+ ++K R +++ TN++ E+L
Sbjct: 159 PPPPAT-APPTRRNAEARSKQRTTTSSTNNNSSEFL 193
>At3g15120.1 68416.m01913 AAA-type ATPase family protein contains
PROSITE domains, PS00674: AAA-protein family signature
and PS00017: ATP/GTP-binding site motif A (P-loop)
Length = 1954
Score = 31.1 bits (67), Expect = 5.2
Identities = 27/122 (22%), Positives = 57/122 (46%), Gaps = 7/122 (5%)
Query: 653 EIQEQELKAKSILDPSDGEIDNKTDSDCKELTAIDDLIKSKQDREETKELSKSPLKSLDE 712
E+ E +++ D +D EID DSD E + +++ ET E + +++
Sbjct: 244 EVDRTETESEDGTDSTDNEID---DSD--EEGESETQCSAEKTGSET-EANVEEMRADTN 297
Query: 713 LTLDSF-NMFRKSVSPKPSQIEAKIEDIKSVMKSLQIDKTRGSVSPRDSNGTVEIKLEDS 771
+T+++ N R + ++IE +ED K M + + G+ D N +++ + +S
Sbjct: 298 VTMEAVQNESRNQMEELENEIEMGVEDEKKEMSVIVSESGNGTGIREDENKEMDVIVSES 357
Query: 772 SD 773
+
Sbjct: 358 GN 359
>At1g77500.1 68414.m09025 expressed protein contains Pfam domains,
PF04782: Protein of unknown function (DUF632) and
PF04783: Protein of unknown function (DUF630)
Length = 879
Score = 31.1 bits (67), Expect = 5.2
Identities = 19/73 (26%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Query: 169 EKLTKTNSSGDANTTGSKTTESGAEGGVAELVDLEQELSSLRRGLTQVEGLTPSTDPFGD 228
+++ + DA + S ++ +E G++ L DL+ +L S+R+ L + G T +
Sbjct: 779 QRVKAQSEQRDAESERSVVSKGRSESGISALDDLKVDLDSMRKRLVEERGKGKETIKLVN 838
Query: 229 SFIVTSQK-GLLP 240
+ +S K GL+P
Sbjct: 839 NASSSSLKAGLVP 851
>At1g48760.2 68414.m05457 delta-adaptin, putative similar to
SP|O14617 Adapter-related protein complex 3 delta 1
subunit (Delta-adaptin 3) {Homo sapiens}; contains Pfam
profile: PF01602 Adaptin N terminal region
Length = 869
Score = 31.1 bits (67), Expect = 5.2
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Query: 689 LIKSKQDREETKELSKSPLKS--LDELTLDSFNMFRKSVSPKPSQIEAKIED 738
L K+D++ S PL + +E++ DSFN RK KP + K++D
Sbjct: 712 LTSQKEDQDSNGTSSDYPLANELANEISQDSFNPKRKPNQSKPRPVVVKLDD 763
>At1g48760.1 68414.m05456 delta-adaptin, putative similar to
SP|O14617 Adapter-related protein complex 3 delta 1
subunit (Delta-adaptin 3) {Homo sapiens}; contains Pfam
profile: PF01602 Adaptin N terminal region
Length = 869
Score = 31.1 bits (67), Expect = 5.2
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Query: 689 LIKSKQDREETKELSKSPLKS--LDELTLDSFNMFRKSVSPKPSQIEAKIED 738
L K+D++ S PL + +E++ DSFN RK KP + K++D
Sbjct: 712 LTSQKEDQDSNGTSSDYPLANELANEISQDSFNPKRKPNQSKPRPVVVKLDD 763
>At1g18950.1 68414.m02358 aminoacyl-tRNA synthetase family contains
aminoacyl-transfer RNA synthetases class-II signature 1,
PROSITE:PS00179
Length = 766
Score = 31.1 bits (67), Expect = 5.2
Identities = 21/83 (25%), Positives = 39/83 (46%), Gaps = 2/83 (2%)
Query: 632 ANFDDFDKKANPSFD-RYAVFREIQEQELKAKSILDP-SDGEIDNKTDSDCKELTAIDDL 689
A++DDFD+ + S D R R + Q A ++ SD E++ ++D D D+
Sbjct: 487 ADYDDFDEHRDESLDRRQDTVRRQRPQRYSATDFVETVSDNEVEFQSDDDIYGEAVYDEE 546
Query: 690 IKSKQDREETKELSKSPLKSLDE 712
K+ +++ S+ + DE
Sbjct: 547 YLKKRKQKKLSSGSEGDEEKGDE 569
>At1g13330.1 68414.m01547 expressed protein similar to nuclear
receptor coactivator GT198 (GI:16506273) {Rattus
norvegicus}; similar to TBP-1 interacting protein
(GI:7328534) [Homo sapiens]
Length = 226
Score = 31.1 bits (67), Expect = 5.2
Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Query: 736 IEDIKSVMKSLQIDKTRGSVSPRDSNGTVEIKLEDSSDRYAALRE-ITITEPPDE 789
I D++S +KSLQ + T + +D+ E+K + ++ LRE IT+ P D+
Sbjct: 102 ISDVESEIKSLQSNLTLEEIQEKDAKLRKEVK--EMEEKLVKLREGITLVRPEDK 154
>At5g57200.1 68418.m07145 epsin N-terminal homology (ENTH)
domain-containing protein / clathrin assembly
protein-related low similarity to clathrin assembly
protein AP180 [Xenopus laevis] GI:6492344; contains Pfam
profile PF01417: ENTH domain
Length = 591
Score = 30.7 bits (66), Expect = 6.8
Identities = 22/107 (20%), Positives = 53/107 (49%), Gaps = 8/107 (7%)
Query: 629 TFVANFDDFDKKA--NPSFDRYAVFREIQEQELKAKSILDPSDGEIDNKTDSDCKELTAI 686
+F+A +++ K+A + S + ++E +E+E + + E +N+ ++ + I
Sbjct: 297 SFLATMEEYIKEAPQSGSVQKKLEYQEKEEEEQEQEEEQPEEPAEEENQNENTENDQPLI 356
Query: 687 DDLIKSKQDREETKELSKSPLKSLDELTLDSFNMFRKSVSPKPSQIE 733
++ + ++ E +E SPL D+L + ++PK ++IE
Sbjct: 357 EEEEEEPKEEIEVEEAKPSPLIDTDDL------LGLHEINPKAAEIE 397
>At5g16730.1 68418.m01959 expressed protein weak similarity to
microtubule binding protein D-CLIP-190 [Drosophila
melanogaster] GI:2773363, SMC2-like condensin
[Arabidopsis thaliana] GI:14279543
Length = 853
Score = 30.7 bits (66), Expect = 6.8
Identities = 26/169 (15%), Positives = 69/169 (40%), Gaps = 1/169 (0%)
Query: 652 REIQEQELKAKSILDPSDGEIDNKTDSDCKELTAIDDLIKSKQDREETKELSKSPLKSLD 711
+E++E+ + + L + E ++ + T ++I +D + +++S ++ L
Sbjct: 599 KEVEEEIVYLQETLGEAKAESMKLKENLLDKETEFQNVIHENEDLKAKEDVSLKKIEELS 658
Query: 712 ELTLDSFNMFRKSVSPKPSQIEAKIEDIKSVMKSLQIDKTRGSVSPRDSNGTVEIKLEDS 771
+L L+ + +K + ++ +D + K ++ G S + + VE +
Sbjct: 659 KL-LEEAILAKKQPEEENGELSESEKDYDLLPKVVEFSSENGHRSVEEKSAKVETLDHEP 717
Query: 772 SDRYAALREITITEPPDEFESLPPEIPKERKKSDEKSDGFDNSDFFDCI 820
+ ++ + PE+ E+K+ ++S D D + I
Sbjct: 718 PQEQISNGNSNGNGMEEKEVNGKPEVETEKKEKKDESQDDDKDDSVEVI 766
>At5g07820.1 68418.m00896 expressed protein
Length = 561
Score = 30.7 bits (66), Expect = 6.8
Identities = 27/124 (21%), Positives = 59/124 (47%), Gaps = 4/124 (3%)
Query: 671 EIDNKTDSDCKELTAIDDLIKSKQDREETKELSK--SPLKSLDELTLDSFNMFRKS-VSP 727
++ KTD + K+++ I + SK+D + KE +K P++ D L S + + S +S
Sbjct: 217 DVLEKTDLEVKKVSRISENKSSKEDTLKNKEKAKIDEPVRCDDVLEKTSLDAQKVSRISE 276
Query: 728 KPSQIEAKIEDIKSVMKSLQIDKTRGSVSPRDSNGTVEIKLEDSSDRYAALREITITEPP 787
+ E +++++K+ K+ + R + + VE +E + + + + I+E
Sbjct: 277 NKNSKEERLKNLKNKEKTNIDEPVRPDDAVEKTLYVVESSVEKKKKKMST-KSVKISETQ 335
Query: 788 DEFE 791
E
Sbjct: 336 QSSE 339
>At1g53590.1 68414.m06088 C2 domain-containing protein
Length = 751
Score = 30.7 bits (66), Expect = 6.8
Identities = 28/134 (20%), Positives = 58/134 (43%), Gaps = 8/134 (5%)
Query: 613 KPQFEDDFAPSTETNGTFVAN-----FDDFDKKANPSFDRYAVFREIQEQELKAKSILDP 667
K + FA T G+F ++ D+F+ + A++ +Q+ + I +P
Sbjct: 416 KEDIQTSFASDTTNLGSFSSDKSPSVVDNFEPIKIDGQEETAIW--VQKPGAEVSQIWEP 473
Query: 668 SDGEIDNKTDSDCKELTAIDDLIKSKQDREETKELSKSPLKSLDELTLDSFNMFRKSVSP 727
G+ + DS + + L ++ +E SK+P+KS+ +MF ++V
Sbjct: 474 RKGK-SRRLDSQIQRTPNDESLSNGSSSTDDNQEGSKNPMKSVGRGLRKIGSMFHRNVKK 532
Query: 728 KPSQIEAKIEDIKS 741
+ I + E+ +S
Sbjct: 533 EEFLIGSIEEESQS 546
>At1g21680.1 68414.m02713 expressed protein similar to TolB protein
precursor (SP:Q9ZDM5) {Rickettsia prowazekii}; ESTs
gb|N96028, gb|F14286, gb|T20680, gb|F14443, gb|AA657300
and gb|N65244 come from this gene
Length = 706
Score = 30.7 bits (66), Expect = 6.8
Identities = 20/74 (27%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Query: 177 SGDANTTGSKTTESGAEGGVAELVDLEQELSSLRR-GLTQVEGLTPSTDPFGDSFIVTSQ 235
S D++ G + A G + L+ LE ++ R L +++G PS P GD
Sbjct: 371 SPDSSRVGYHSCRGDANGRRSPLLFLENIQTTTRDLSLFRIDGSFPSFSPGGDRIAYVKM 430
Query: 236 KGLLPPPPSGASTR 249
G+ P G+ R
Sbjct: 431 PGVFVVKPDGSGQR 444
>At5g37010.1 68418.m04438 expressed protein
Length = 637
Score = 30.3 bits (65), Expect = 9.0
Identities = 17/33 (51%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 907 PVTRLPRPPSHHRDRESRHNSSGSRECLDSGSG 939
P R R PS RD +S+ N SGSRE SG+G
Sbjct: 177 PRERRRRTPSRERD-DSKSNRSGSRERGSSGNG 208
>At4g36690.3 68417.m05206 U2 snRNP auxiliary factor large subunit,
putative similar to U2 snRNP auxiliary factor, large
subunit [Nicotiana plumbaginifolia] GI:3850823
Length = 565
Score = 30.3 bits (65), Expect = 9.0
Identities = 24/80 (30%), Positives = 36/80 (45%), Gaps = 10/80 (12%)
Query: 248 TRGRSTPATQRSTFS--PSKTAPTTLPFDIVPASSDLETTPAPIVDSVCEQPVSQAGTGA 305
+R RS ++R T S PSK+ FD+ P +S + A + V P + G G
Sbjct: 147 SRSRSKDRSERRTRSRSPSKSKQRVSGFDMAPPASAMLAAGAAVTGQVPPAPPTLPGAG- 205
Query: 306 AQTLGYDVFTELDPLGTGRS 325
+F + PL TG+S
Sbjct: 206 -------MFPNMFPLPTGQS 218
>At4g36690.2 68417.m05207 U2 snRNP auxiliary factor large subunit,
putative similar to U2 snRNP auxiliary factor, large
subunit [Nicotiana plumbaginifolia] GI:3850823
Length = 542
Score = 30.3 bits (65), Expect = 9.0
Identities = 24/80 (30%), Positives = 36/80 (45%), Gaps = 10/80 (12%)
Query: 248 TRGRSTPATQRSTFS--PSKTAPTTLPFDIVPASSDLETTPAPIVDSVCEQPVSQAGTGA 305
+R RS ++R T S PSK+ FD+ P +S + A + V P + G G
Sbjct: 147 SRSRSKDRSERRTRSRSPSKSKQRVSGFDMAPPASAMLAAGAAVTGQVPPAPPTLPGAG- 205
Query: 306 AQTLGYDVFTELDPLGTGRS 325
+F + PL TG+S
Sbjct: 206 -------MFPNMFPLPTGQS 218
>At4g36690.1 68417.m05205 U2 snRNP auxiliary factor large subunit,
putative similar to U2 snRNP auxiliary factor, large
subunit [Nicotiana plumbaginifolia] GI:3850823
Length = 573
Score = 30.3 bits (65), Expect = 9.0
Identities = 24/80 (30%), Positives = 36/80 (45%), Gaps = 10/80 (12%)
Query: 248 TRGRSTPATQRSTFS--PSKTAPTTLPFDIVPASSDLETTPAPIVDSVCEQPVSQAGTGA 305
+R RS ++R T S PSK+ FD+ P +S + A + V P + G G
Sbjct: 147 SRSRSKDRSERRTRSRSPSKSKQRVSGFDMAPPASAMLAAGAAVTGQVPPAPPTLPGAG- 205
Query: 306 AQTLGYDVFTELDPLGTGRS 325
+F + PL TG+S
Sbjct: 206 -------MFPNMFPLPTGQS 218
>At4g32760.1 68417.m04661 VHS domain-containing protein / GAT
domain-containing protein weak similarity to hepatocyte
growth factor-regulated tyrosine kinase substrate HRS
isoform 2 [Homo sapiens] GI:9022389; contains Pfam
profiles PF00790: VHS domain, PF03127: GAT domain
Length = 838
Score = 30.3 bits (65), Expect = 9.0
Identities = 27/92 (29%), Positives = 36/92 (39%), Gaps = 4/92 (4%)
Query: 185 SKTTESGAE--GGVAELVDLEQ-ELSSLRRGLTQVEGLTPSTDPFGDSFIVTSQKGLLPP 241
S+ E+G + G A V Q E S +G++ P+ P S+ PP
Sbjct: 566 SQAGEAGLQQSNGFAPQVGYSQFEQPSYGQGVSSPWSSQPAQQPVQPSYEGAQDSTAFPP 625
Query: 242 PPSGASTRGRSTPATQRSTFSPSKTAPTTLPF 273
PP A + S A S FSP PT F
Sbjct: 626 PPWEAQLQDYSPSAESGSPFSPG-MHPTQTAF 656
>At3g19020.1 68416.m02415 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 956
Score = 30.3 bits (65), Expect = 9.0
Identities = 19/79 (24%), Positives = 36/79 (45%), Gaps = 3/79 (3%)
Query: 433 QEFPKSSAPRADEPKTV--PKDSALEKLEPSLEGARNVFNGPLQVSLPPEPAPKSPRLQR 490
+E PK P+ + PK PK ++ +P A + + PL+ +P +P SP +++
Sbjct: 563 EESPKPQPPKQETPKPEESPKPQPPKQEQPPKTEAPKMGSPPLESPVPNDPYDASP-IKK 621
Query: 491 QADRKTKPRLSSAGTNSSE 509
+ + P T S +
Sbjct: 622 RRPQPPSPSTEETKTTSPQ 640
>At2g22530.1 68415.m02672 phosphatidylinositolglycan-related similar
to Pig-o [Mus musculus] GI:8099973
Length = 897
Score = 30.3 bits (65), Expect = 9.0
Identities = 12/29 (41%), Positives = 19/29 (65%)
Query: 341 PPKKVLKDLVPVAQSLISDATPVANECKA 369
PP+KVLK+ +P QSL+++ + KA
Sbjct: 93 PPEKVLKESMPYTQSLLANGDAIGYHAKA 121
>At1g76970.1 68414.m08962 VHS domain-containing protein / GAT
domain-containing protein weak similarity to
HGF-regulated tyrosine kinase substrate [Mus musculus]
GI:1089781; contains Pfam profiles PF00790: VHS domain,
PF03127: GAT domain
Length = 446
Score = 30.3 bits (65), Expect = 9.0
Identities = 23/54 (42%), Positives = 25/54 (46%), Gaps = 8/54 (14%)
Query: 885 PDTKVQTSSSSR---DVSPWDEDLPPVTR-LPRPPSHHRDR----ESRHNSSGS 930
P +SSSS D SP V R LP PPS H R E H+SSGS
Sbjct: 343 PPPHTSSSSSSPVFDDASPQQSKSSEVIRNLPPPPSRHNQRQQFFEHHHSSSGS 396
>At1g75260.1 68414.m08743 isoflavone reductase family protein similar
to SP|P52577 Isoflavone reductase homolog P3 (EC 1.3.1.-)
{Arabidopsis thaliana}; contains Pfam profile PF02716:
Isoflavone reductase
Length = 593
Score = 30.3 bits (65), Expect = 9.0
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Query: 1229 SDSISPRSMFEDDFTAVSTPRGRAASIAEEDENDV---PPLRARPPPHKDIRKSESINIF 1285
S + M E P G IAEE+ + V PP+ ARP H + +++E++
Sbjct: 101 SKKLDSLRMEEQKVATKEKPPGETEKIAEENISPVKEKPPIGARPEEHLEQKETEAVQEQ 160
Query: 1286 TRDSD 1290
R+++
Sbjct: 161 GRNTE 165
>At1g72160.1 68414.m08343 SEC14 cytosolic factor family protein /
phosphoglyceride transfer family protein similar to
GI:807956 from [Saccharomyces cerevisiae]similar to
polyphosphoinositide binding protein Ssh2p (GI:2739046)
{Glycine max}; contains Pfam PF00650 : CRAL/TRIO domain;
contains Pfam PF03765 : CRAL/TRIO, N-terminus
Length = 490
Score = 30.3 bits (65), Expect = 9.0
Identities = 31/131 (23%), Positives = 52/131 (39%), Gaps = 7/131 (5%)
Query: 586 EKETSISIIPRKLDS---TIPSAPEASTDFKPQFEDDFAPSTETNGTFVANFDDFDKKAN 642
E T+ + P KL S T E++ D P + TETN A+ ++
Sbjct: 4 EPTTTTLVTPEKLPSPSLTPSEVSESTQDALPTETETLEKVTETNPPETADTTTKPEEET 63
Query: 643 PSFDRYAVFREIQEQELKAKSILDPSDGEIDNKTDSDCKELTAIDDLIKSKQDREETKEL 702
+ E + + + + D E K ++ K+ +L K++ + +L
Sbjct: 64 AAEHHPPTVTETETASTEKQEVKD----EASQKEVAEEKKSMIPQNLGSFKEESSKLSDL 119
Query: 703 SKSPLKSLDEL 713
S S KSLDEL
Sbjct: 120 SNSEKKSLDEL 130
>At1g67120.1 68414.m07636 midasin-related similar to Midasin
(MIDAS-containing protein) (Swiss-Prot:Q12019)
[Saccharomyces cerevisiae]; similar to Midasin
(MIDAS-containing protein) (Swiss-Prot:Q9NU22) [Homo
sapiens]; contains Prosite PS00017: ATP/GTP-binding site
motif A (P-loop)
Length = 5336
Score = 30.3 bits (65), Expect = 9.0
Identities = 37/162 (22%), Positives = 70/162 (43%), Gaps = 12/162 (7%)
Query: 653 EIQEQELKAKSILDPSDGEIDNKTDSDCKELTAIDDLIKSKQDREETKELSKSPLKSLDE 712
E +E+ + K+ PS +D T S +EL A DD +++ + EE+ K + +
Sbjct: 4591 EDEEENMNEKNESGPSI--VDKDTRS--RELRAKDDGVETADEPEESNTSDKPEEGNDEN 4646
Query: 713 LTLDSF---NMFRKSVSPKPSQIEAKIEDI--KSVMKSLQIDKTRGSVSPRDSNGTVEIK 767
+ D F + + + K + D+ + + +++DKT V D+N E
Sbjct: 4647 VEQDDFDDTDNLEEKIQTKEEALGGLTPDVDNEQIDDDMEMDKTE-EVEKEDANQQEEPC 4705
Query: 768 LEDSSDRYAALREITITEPPDEFESLPPEIPKERKKSDEKSD 809
ED + T+ P E E++ E ++R S +K +
Sbjct: 4706 SEDQKHPEEGENDQEETQEPSE-ENMEAE-AEDRCGSPQKEE 4745
>At1g65010.1 68414.m07368 expressed protein similar to
endosome-associated protein (GI:1016368) [Homo sapiens];
similar to Centromeric protein E (CENP-E protein)
(Swiss-Prot:Q02224) [Homo sapiens]
Length = 1318
Score = 30.3 bits (65), Expect = 9.0
Identities = 30/144 (20%), Positives = 62/144 (43%), Gaps = 5/144 (3%)
Query: 668 SDGEIDNKTDSDCKELTAIDDLI-KSKQDREETKELSKSPLKSLDELTLDSFNMFRKSVS 726
S +S K+L ++ ++ ++K D KE + K+++ D R+
Sbjct: 302 SKSSASESMESVMKQLAELNHVLHETKSDNAAQKEKIELLEKTIEAQRTDLEEYGRQVCI 361
Query: 727 PKP--SQIEAKIEDIKSVMKSLQIDKTRGSVSPRDSNGTVEIKLEDSSDRYAALREITIT 784
K S++E +E IKS ++ Q +KTR + + + ++ L+ ++ L +
Sbjct: 362 AKEEASKLENLVESIKSELEISQEEKTRALDNEKAATSNIQNLLDQRTELSIELERCKVE 421
Query: 785 EPPD--EFESLPPEIPKERKKSDE 806
E + ESL + + +S E
Sbjct: 422 EEKSKKDMESLTLALQEASTESSE 445
>At1g48380.1 68414.m05404 root hair initiation protein root hairless
1 (RHL1)
Length = 355
Score = 30.3 bits (65), Expect = 9.0
Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 6/76 (7%)
Query: 857 VELTPVRELRPPERVSTGSISDVVSGSS---PDTKVQTSSSSRDVSPWDEDLPPVTRLPR 913
+++TP +L PP +V+ S SG +T + SS + + DED P L
Sbjct: 229 IQVTPPVQLTPPVQVTPVRQSQRNSGKKFNFAETSSEASSGESEGNTSDEDEKP---LLE 285
Query: 914 PPSHHRDRESRHNSSG 929
P S R RE + +G
Sbjct: 286 PESSTRSREESQDGNG 301
>At1g23540.1 68414.m02960 protein kinase family protein contains
Pfam domain, PF00069: Protein kinase domain
Length = 720
Score = 30.3 bits (65), Expect = 9.0
Identities = 18/60 (30%), Positives = 24/60 (40%)
Query: 240 PPPPSGASTRGRSTPATQRSTFSPSKTAPTTLPFDIVPASSDLETTPAPIVDSVCEQPVS 299
PPPPS +S STP+ T + S + P P + + P P D P S
Sbjct: 78 PPPPSDSSPPVDSTPSPPPPTSNESPSPPEDSETPPAPPNESNDNNPPPSQDLQSPPPSS 137
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.312 0.130 0.373
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,079,025
Number of Sequences: 28952
Number of extensions: 1274217
Number of successful extensions: 3759
Number of sequences better than 10.0: 66
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 57
Number of HSP's that attempted gapping in prelim test: 3700
Number of HSP's gapped (non-prelim): 122
length of query: 1322
length of database: 12,070,560
effective HSP length: 90
effective length of query: 1232
effective length of database: 9,464,880
effective search space: 11660732160
effective search space used: 11660732160
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 65 (30.3 bits)
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