Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001866-TA|BGIBMGA001866-PA|IPR006020|Phosphotyrosine
interaction region
(1322 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC694.06c |mrc1||mediator of replication checkpoint 1 |Schizos... 40 0.003
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 39 0.004
SPCC330.11 |btb1||BTB/POZ domain protein Btb1|Schizosaccharomyce... 33 0.35
SPBC3E7.08c |rad13||DNA repair nuclease Rad13|Schizosaccharomyce... 32 0.46
SPAC22A12.11 |dak1||dihydroxyacetone kinase Dak1|Schizosaccharom... 32 0.46
SPBC25D12.02c |dnt1||nucleolar protein Dnt1|Schizosaccharomyces ... 32 0.46
SPBC12C2.10c |pst1|SPBC21D10.01c|Clr6 histone deacetylase comple... 32 0.46
SPCC4G3.12c |||ubiquitin-protein ligase E3 |Schizosaccharomyces ... 32 0.46
SPAC4A8.12c |sds22||protein phosphatase regulatory subunit Sds22... 32 0.61
SPAC31F12.01 |zds1|SPAC637.14, mug88|zds family protein Zds1|Sch... 31 0.81
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 31 1.1
SPAC14C4.02c |smc5|spr18|Smc5-6 complex SMC subunit Smc5 |Schizo... 31 1.1
SPBC23E6.07c |rfc1||DNA replication factor C complex subunit Rfc... 31 1.1
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 30 1.9
SPBC1347.02 |fkbp39||FKBP-type peptidyl-prolyl cis-trans isomera... 30 1.9
SPAPB1E7.01c |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 30 2.5
SPBC19G7.16 |iws1||transcription elongation factor complex subun... 30 2.5
SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40 |Schi... 30 2.5
SPBC28F2.10c |kap1||chromatin remodeling complex subunit Ngg1 |S... 30 2.5
SPBC3F6.05 |rga1||GTPase activating protein Rga1|Schizosaccharom... 30 2.5
SPBC25H2.11c |||bromodomain protein|Schizosaccharomyces pombe|ch... 29 3.3
SPAC1486.03c |||RNA-binding splicing factor|Schizosaccharomyces ... 29 3.3
SPBC30B4.02c |||R3H and G-patch domain, unknown biological role|... 29 3.3
SPAC4F10.08 |mug126||sequence orphan|Schizosaccharomyces pombe|c... 29 5.7
SPCC338.04 |cid2||caffeine induced death protein Cid2|Schizosacc... 29 5.7
SPCC622.15c |||sequence orphan|Schizosaccharomyces pombe|chr 3||... 29 5.7
SPAC27F1.06c |||FKBP-type peptidyl-prolyl cis-trans isomerase |S... 29 5.7
SPBC21D10.06c |map4||cell agglutination protein Map4|Schizosacch... 29 5.7
SPBP23A10.13 |orc4|orp4|origin recognition complex subunit Orc4|... 28 7.6
SPBC337.06c |cwf15||complexed with Cdc5 protein Cwf15 |Schizosac... 28 10.0
SPAC823.12 |||zinc finger protein Pep5/Vps11 |Schizosaccharomyce... 28 10.0
SPAC2G11.05c |||BRO1 domain protein|Schizosaccharomyces pombe|ch... 28 10.0
SPAC4D7.01c |sec71|sec7a, SPAP8A3.15c|Sec7 domain|Schizosaccharo... 28 10.0
SPAC1002.02 |mug31||nucleoporin Pom34 |Schizosaccharomyces pombe... 28 10.0
>SPAC694.06c |mrc1||mediator of replication checkpoint 1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1019
Score = 39.5 bits (88), Expect = 0.003
Identities = 51/186 (27%), Positives = 82/186 (44%), Gaps = 27/186 (14%)
Query: 647 RYAVFREIQ----EQELKAKSILDPS-DGEIDNKTDSDCKELTAIDDLIKSKQDREETKE 701
R AV ++Q E+ELKAK I P+ GE + + D L +++ D E+ ++
Sbjct: 417 RAAVMAKLQRNQLEEELKAKGIYKPTIQGEKEEEEDP----------LERARNDAEKIRQ 466
Query: 702 LSKSPLKSLDELTLDSFNMFRKSVSPKPSQIEAKIEDIKSVMKSLQIDKTRGSVSPRDSN 761
L K+ + DE L+ S S PS +AK + K ++ + I+ T+ R N
Sbjct: 467 LEKASGNASDEGELNDEEEVISS-SNTPST-KAKTTN-KVIISDVIIEATQAEPKRRQKN 523
Query: 762 GTVEIKLEDSSDRYAALREITITEPPDE---------FESLPPEIPKERKKSDEKSDGFD 812
V ED + + I+E DE F+ L E K+ +K++E D F
Sbjct: 524 SRVVFDEEDLTGDSHGSSNMKISESDDESNGDMIRDSFDRLSSESIKDSQKTEELHDSFG 583
Query: 813 NSDFFD 818
+D D
Sbjct: 584 INDEVD 589
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 39.1 bits (87), Expect = 0.004
Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
Query: 242 PPSGASTRGRSTPATQRSTFSPSKTAPTTLPFDIVPASS-DLETTPAPIVDSVCEQPVSQ 300
PP+G S+ STP T T P+ T+ T++P SS D + P P + C S
Sbjct: 122 PPTGGSS-SLSTPITP--TVPPTSTSSTSIPIPPTSTSSTDTNSNPLPTTSTSCTTSTSI 178
Query: 301 AGTGAAQTLGYDVFTELDPLGT 322
TG + +L + + P T
Sbjct: 179 PPTGGSSSLSTPITPTVPPTST 200
Score = 32.7 bits (71), Expect = 0.35
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
Query: 243 PSGASTRGRSTPATQRSTFSPSKTAPTTLPFDIVPASS-DLETTPAPIVDSVCEQPVSQA 301
P+G S+ STP T T P+ T+ T++P SS D ++P P + C S
Sbjct: 236 PTGGSS-SLSTPITP--TVPPTSTSSTSIPIPPTSTSSTDTNSSPLPTTSTSCTTSTSIP 292
Query: 302 GTGAAQT 308
TG + T
Sbjct: 293 PTGNSTT 299
Score = 28.7 bits (61), Expect = 5.7
Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 7/63 (11%)
Query: 233 TSQKGLLPPPPSGASTRGRSTPATQRSTFSPSKTA--PT---TLPF--DIVPASSDLETT 285
TS PPP S +ST S+P ST + T+ PT T P + P S+ +T
Sbjct: 310 TSSTSTPPPPASTSSTGTSSSPLPSTSTSCTTSTSIPPTGNSTTPVTPTVPPTSTSSTST 369
Query: 286 PAP 288
P P
Sbjct: 370 PPP 372
>SPCC330.11 |btb1||BTB/POZ domain protein Btb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1347
Score = 32.7 bits (71), Expect = 0.35
Identities = 35/158 (22%), Positives = 62/158 (39%), Gaps = 7/158 (4%)
Query: 650 VFREIQEQELKAKSILDPSDGEIDNKTDSDCKELTAIDDLIKSKQDREETKELSKSPLKS 709
+ RE +E ++ I S I N + + LT S + +S+ +
Sbjct: 1185 ILREAAREEGSSQVIYQESKKRISNGSPTSWNLLTKPSPRSASLPKNSQPLSISEIMTEQ 1244
Query: 710 LDELTLDSF-NMFRKSVSPKPSQIEAKI---EDIKSVMKSLQIDKTRGSVSPRDSNGTVE 765
+E+ + FRK++ + E + E+ V K L I KT S G
Sbjct: 1245 KEEIESQKRRSSFRKTIEEIQQEEEFQKWWEEESLRVQKELGILKTERDTSTNRKQGQAS 1304
Query: 766 IKLEDSSDRYAALREITITEPPDEFESLPPEIPKERKK 803
+ R+ ++ ++E EF+SLP +IP+ K
Sbjct: 1305 ---KQPQRRHRKEKDSKVSESTAEFKSLPIDIPRTTHK 1339
>SPBC3E7.08c |rad13||DNA repair nuclease Rad13|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1112
Score = 32.3 bits (70), Expect = 0.46
Identities = 26/104 (25%), Positives = 50/104 (48%), Gaps = 6/104 (5%)
Query: 611 DFKPQFEDDFAPSTETNGTFVANFDDFDKKANPSFDRYAVFREIQEQELKAKSILDPSDG 670
D K + D P+ ET+ ++ DF K+A+P+ A+ +++ + + + +LD +
Sbjct: 640 DIKSESIDAVLPTLETSSPSLSIPTDFQKEASPNKGAAALSSKVEPEVV--EKLLDEEEE 697
Query: 671 EIDNKTDSDCKELTAIDDLIKSKQDREETKELSKSPL-KSLDEL 713
E+ + + KE D + R ET+E ++ K L EL
Sbjct: 698 EMIIRMAEEEKE---YDRFVSELNQRHETEEWNQEAFEKRLKEL 738
>SPAC22A12.11 |dak1||dihydroxyacetone kinase
Dak1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 580
Score = 32.3 bits (70), Expect = 0.46
Identities = 23/81 (28%), Positives = 35/81 (43%), Gaps = 5/81 (6%)
Query: 74 TGDSLYHHPVHKISFIAQDMTDSRAFGYIFGSPDTGHRFFGIK-TDKAASQVVIAMR--- 129
+G H P H SF+ + M + G IF SP + + GIK + A +VI
Sbjct: 50 SGGGAGHEPTHS-SFVGKGMLTAAVSGSIFASPSSKQIYTGIKQVESEAGTLVICKNYTG 108
Query: 130 DLFQVVFELKKKEVEMAKQQL 150
D+ L+K+ K +L
Sbjct: 109 DILHFGMALEKQRTAGKKAEL 129
>SPBC25D12.02c |dnt1||nucleolar protein Dnt1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 599
Score = 32.3 bits (70), Expect = 0.46
Identities = 65/308 (21%), Positives = 113/308 (36%), Gaps = 32/308 (10%)
Query: 548 PAATLSSMTLPQLTEYLRSYLAADNDRAHIHVEPSTKTEKETSISIIPRKLDSTIPSAP- 606
P TLSS + ++ + R YL + A I + + S+ R++ P+
Sbjct: 252 PLRTLSSPSRLRMKDNDRKYLVEHSPAALIKESETIDGIDDKSLRSSTREVSVESPNEDS 311
Query: 607 ---EASTDFKPQFEDDFAPSTETNGTFVANFDDFDKKANPSFDRYAVFREIQEQELKAKS 663
++S+D + E + V A PS + E S
Sbjct: 312 VNDDSSSDVSDEKETEAKHEIRAPAIIVRETSSHPSTAVPSENDTTESENDTLSESSTTS 371
Query: 664 ILD-PSDGE--IDNKTDSDCKELTAIDDLIKSKQDREETKELSKSPLKSLDELTLDSFNM 720
I PS+ D+ T D + ++D + +K D+E SK P S +T + +
Sbjct: 372 ISSSPSENSDTSDDLTKVDSPNKSLVNDNVSAKHDKESENGKSKFPPPSQTLVTTSTISA 431
Query: 721 FRKSVSPK-----------------P-SQIEAKIEDIKSVMKSLQIDKTRGSVSPRDSNG 762
S + P SQ++ K + SV +Q T+GS +
Sbjct: 432 AGNEPSDEIGSENDSDSDSDSDSSVPLSQLQKKSQQRNSVSHEIQNRGTKGSPKEPKAKP 491
Query: 763 TVEIKLEDSSDRYAALREITITEPPDEFE-------SLPPEIPKERKKSDEKSDGFDNSD 815
+ E + Y+ L E++ T P+ E ++ + KE +SDE S+ ++
Sbjct: 492 STERPETHRTLSYSRLSELSKTFSPEIREPSLTKKTAVSMQESKEEGRSDESSESEESGS 551
Query: 816 FFDCIDNS 823
D DNS
Sbjct: 552 SSDESDNS 559
>SPBC12C2.10c |pst1|SPBC21D10.01c|Clr6 histone deacetylase complex
subunit Pst1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1522
Score = 32.3 bits (70), Expect = 0.46
Identities = 26/84 (30%), Positives = 34/84 (40%), Gaps = 3/84 (3%)
Query: 223 TDPFGDSFIVTSQKGLLPPPPSGASTRGRSTPATQRSTFSPSKTAPTTLPFDIVPASSDL 282
T P G I K PPPP G++T PA T K + + P PA S L
Sbjct: 267 TTPQGPLMINDLGKTTAPPPPHGSTT---PLPAAASYTSMNMKQSSASHPVLQPPAPSTL 323
Query: 283 ETTPAPIVDSVCEQPVSQAGTGAA 306
+ P+P + PV + AA
Sbjct: 324 QFNPSPSPAAPSYPPVDASVKQAA 347
>SPCC4G3.12c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 821
Score = 32.3 bits (70), Expect = 0.46
Identities = 41/159 (25%), Positives = 60/159 (37%), Gaps = 12/159 (7%)
Query: 477 LPPEPAPKSPRLQRQADRK------TKPRLSSAGTNSSEDEYLTXXXXXXXXXRRFDITL 530
L P P+ S RL R + R + P LSS G+++ + T
Sbjct: 138 LHPRPSGNSSRLDRNSSRPFTSSFHSAPFLSSYGSSNDPSQERVNEYSLPSNSNSTYTTP 197
Query: 531 AQLLTCSMDELALRLRVPAATLSSMTLPQLTEYLRSYLAADNDRAHIHVEPSTKTEKETS 590
Q + + L L A +S P L +LR YL + D + +H PS +
Sbjct: 198 LQSIN-NEHPLPTVLENNALLNNSGNSPSLINHLRQYL--NQDFSRLHQSPSPIPNSNDN 254
Query: 591 ISIIPRKLDSTIPSAPEASTDFKPQFEDDFAPSTETNGT 629
S R S+I S A DF +F + P +N T
Sbjct: 255 DSQTRRSSWSSIAS---AFNDFPEEFPNASNPEAHSNFT 290
>SPAC4A8.12c |sds22||protein phosphatase regulatory subunit Sds22
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 332
Score = 31.9 bits (69), Expect = 0.61
Identities = 20/72 (27%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 677 DSDCKELTAIDDLIKSKQDREETKELSKSPLKSLDELTLDSFNMFRKSVSPKPSQIEAKI 736
D D +++ A +DL+ D + EL +S ++S+ L L+ F +S+ + +QI+ KI
Sbjct: 20 DPDVQQIDADEDLLDDVPDDVDCVELIQSRIQSMASLGLERFKNL-QSLCLRQNQIK-KI 77
Query: 737 EDIKSVMKSLQI 748
E + + L +
Sbjct: 78 ESVPETLTELDL 89
>SPAC31F12.01 |zds1|SPAC637.14, mug88|zds family protein
Zds1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 938
Score = 31.5 bits (68), Expect = 0.81
Identities = 55/196 (28%), Positives = 85/196 (43%), Gaps = 23/196 (11%)
Query: 656 EQELKAKSILDPSDGEIDNKTDSDC--KELTAIDDLIKSKQDREETKELSKSPLKSLDEL 713
+Q L+ S+ +P +IDN + KE ID L S +++ E+ S+S L S L
Sbjct: 388 DQALEVLSLTNPP--KIDNASADTTLHKETNKIDKLYVS-ENKAESAVASESSL-SEGTL 443
Query: 714 TLDS---FNMFRKSVSPKPSQIEAKIEDIKSVMKSLQIDKTRGSVS--PRDSNGTVE--I 766
L + N KS + KP E K ED + S+ DK+ S++ P + G E I
Sbjct: 444 ALKAPAPENKPEKSSTSKPPVPENKAEDSVVLKSSVPEDKSENSIASKPSATEGIPENAI 503
Query: 767 KLEDSSDRYAALREITI--TEPPDEFESLPPEIPKERKKSDEKSDGFDNSDFFDCIDNSS 824
L+ S A + + + P D+ E P KS D +NS D + S
Sbjct: 504 ALQSSVPENKAEDSVVLKSSVPEDKSEDSVP------SKSSVLEDKHENSVEIDKKADDS 557
Query: 825 LSFTHVEDAFRKSPSV 840
L + + + +PSV
Sbjct: 558 LPSNNKTEGY--TPSV 571
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 31.1 bits (67), Expect = 1.1
Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
Query: 243 PSGASTRGRSTPATQRSTFSPSKTAPTTLPFDIVPASSDLETTPAPIVDSVCEQPVSQAG 302
P+G+S++G P T + S TT V +S ETT I+ S E P + +G
Sbjct: 776 PTGSSSQGSVVPTTSTGSSVTSTGTGTTTGVTEVTETSTFETT--EIITSTIE-PTTASG 832
Query: 303 TG 304
TG
Sbjct: 833 TG 834
Score = 30.3 bits (65), Expect = 1.9
Identities = 27/98 (27%), Positives = 39/98 (39%), Gaps = 6/98 (6%)
Query: 172 TKTNSSGDANTTGSKTTESGAEGGVAELVDLEQELSSLRRGLTQVEGLTPSTDPFGDSFI 231
T+T S + TG++ T S ++G V ++S G T T F + I
Sbjct: 761 TETFGSTSGSATGTRPTGSSSQGSVVPTTSTGSSVTSTGTGTTTGVTEVTETSTFETTEI 820
Query: 232 VTSQKGLLPPPPSGASTRGRSTPATQRSTFSPSKTAPT 269
+TS P+ AS G P T T P+ T T
Sbjct: 821 ITS-----TIEPTTASGTGGGNP-TAAPTNEPTVTTGT 852
>SPAC14C4.02c |smc5|spr18|Smc5-6 complex SMC subunit Smc5
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1065
Score = 31.1 bits (67), Expect = 1.1
Identities = 33/146 (22%), Positives = 65/146 (44%), Gaps = 12/146 (8%)
Query: 688 DLIKSKQDREETKELSKSPLKSLDELTLDSFNMFRKSVSPKPSQIEAKIEDIKSVMKSLQ 747
++ K++ R+E E + + + E ++ + N F K + + + IEAK + K M + Q
Sbjct: 715 EIEKNEDIRKENFEALMNSVLKVKENSIKATNNFEKMLGSRLNVIEAKYKLEKHEMDANQ 774
Query: 748 IDKTRGSVSPRDSNGTVEIKLEDSSDRYAALREITITEPPDEFESLPPEIPKERKKSDEK 807
++ V R L+D +D+ A+ RE ++ +SL + + E
Sbjct: 775 VNARLTEVQDR---------LKDITDKLASAREDAMSLYGSVVDSLQTQSSDRQTAITEL 825
Query: 808 SDGFDNSDFFD---CIDNSSLSFTHV 830
++ F S D I+ + L F +V
Sbjct: 826 NEEFATSSEVDNKISIEETKLKFMNV 851
>SPBC23E6.07c |rfc1||DNA replication factor C complex subunit
Rfc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 934
Score = 31.1 bits (67), Expect = 1.1
Identities = 31/135 (22%), Positives = 57/135 (42%), Gaps = 9/135 (6%)
Query: 692 SKQDREETKELSKSPLKSLDELTLDSFNMFRKSVSPKPSQIEAKIEDIKSVMKSLQIDKT 751
S Q ++ + ++S ++ + L L ++ + ++P+ SQ K + VMK I
Sbjct: 562 SPQAVDQLVQGTQSDMRQIINL-LSTYKLSCSEMTPQNSQAVIKNSEKHIVMKPWDICSR 620
Query: 752 --RGSVSPRDSNGTVEIKLE----DSSDRYAALREITITEPPDEFESLPPEIP--KERKK 803
G + S T+ KLE D Y ++E + PD PP++ K +
Sbjct: 621 YLHGGMFHPSSKSTINDKLELYFNDHEFSYLMVQENYLNTTPDRIRQEPPKMSHLKHLEL 680
Query: 804 SDEKSDGFDNSDFFD 818
++ F +SD D
Sbjct: 681 ISSAANSFSDSDLVD 695
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 30.3 bits (65), Expect = 1.9
Identities = 24/69 (34%), Positives = 32/69 (46%), Gaps = 6/69 (8%)
Query: 440 APRADEPKTVPKDSALEKLEPSLEGARNVFNGPLQVSLPPEPAPKSPRLQRQADRKTKPR 499
AP P T+P S P +RNV N QV++PP PA S + + T+
Sbjct: 237 APPPPPPPTLPPQSTNTSQLPM--PSRNVNNLGSQVNIPPPPATPSQPPRPPTNASTR-- 292
Query: 500 LSSAGTNSS 508
S GT+SS
Sbjct: 293 --STGTSSS 299
>SPBC1347.02 |fkbp39||FKBP-type peptidyl-prolyl cis-trans
isomerase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 361
Score = 30.3 bits (65), Expect = 1.9
Identities = 33/124 (26%), Positives = 56/124 (45%), Gaps = 4/124 (3%)
Query: 659 LKAKSILDPSDGEIDNKTDSDCKELTAIDDLIKSKQDREETKELSKSPLKSL-DELTLDS 717
L ++D D E + ++D D +DL+++ EE++E S+S S +E LDS
Sbjct: 117 LSGNFLVDEEDEE-EEESDEDYDLSPTEEDLVETVSGDEESEEESESEDNSASEEDELDS 175
Query: 718 FNMFRKSVSPKPSQIEAKIEDIKSVMK-SLQIDKTRGSVSPRDSNGTVEIKLEDSSDRYA 776
+ V K ++ E++ E+ S K + + K G+ E KLE A
Sbjct: 176 APAKKAQVKKKRTKDESEQEEAASPKKNNTKKQKVEGTPVKEKKVAFAE-KLEQGPTGPA 234
Query: 777 ALRE 780
A +E
Sbjct: 235 AKKE 238
>SPAPB1E7.01c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 163
Score = 29.9 bits (64), Expect = 2.5
Identities = 10/18 (55%), Positives = 16/18 (88%)
Query: 1254 SIAEEDENDVPPLRARPP 1271
S++ +++ND PPL+ARPP
Sbjct: 35 SVSSDEKNDDPPLQARPP 52
>SPBC19G7.16 |iws1||transcription elongation factor complex subunit
Iws1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 428
Score = 29.9 bits (64), Expect = 2.5
Identities = 29/134 (21%), Positives = 62/134 (46%), Gaps = 10/134 (7%)
Query: 653 EIQEQELKAKSILDPSDGEIDNKTDSDCKELTAIDDLIKSKQDREETKELSKSPLKSLDE 712
E++ ++++++ +D ID K D T +D+ + +K EE + S+ L LDE
Sbjct: 8 ELENMQVESEAKTSENDQTIDTKVDV-ADVTTHVDEDLDNK---EEALDFSEDELSDLDE 63
Query: 713 LTLDSFN---MFRKSVSPKPSQIEA--KIEDIKSVMKSLQID-KTRGSVSPRDSNGTVEI 766
++F+ + R++ P + K ++ ++ ++L++ K R PR G
Sbjct: 64 NQFENFDESKIGREAEEPTIYNLPTFKKKQEPNTIEENLEVPRKVRKEQKPRRRRGKRSS 123
Query: 767 KLEDSSDRYAALRE 780
++ +D L E
Sbjct: 124 TVDALNDELNELGE 137
>SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 451
Score = 29.9 bits (64), Expect = 2.5
Identities = 40/195 (20%), Positives = 67/195 (34%), Gaps = 2/195 (1%)
Query: 744 KSLQIDKTRGSVSPRDSNGTVEIKLEDSSDRYAALREITITEPPDEFESLPPEIPKERKK 803
K+ + GS S D + + + E SS+ + + +E E +
Sbjct: 95 KAHSSSEASGSGSSSDESDSSSSESESSSEDNDSSSSSSDSESESSSEDSDSSSSSSDSE 154
Query: 804 SDEKSDGFDNSDFFDCIDNSSLSFTHVEDAFRKSPSVXXXXXXXXXXXXXXVAVELTPVR 863
S+ S+G D+S ++ S S + + + S S E
Sbjct: 155 SESSSEGSDSSSSSSSSESESSSEDN-DSSSSSSDSESESSSEDSDSSSSSSDSESESSS 213
Query: 864 ELRPPERVSTGSISDVVSGSSPDTKVQTSSSSRDVSPWDEDLPPVTRLPRPPSHHRDRES 923
E S+ S S+ S D+ +S S + S D D + S +D +S
Sbjct: 214 EGSDSSSSSSSSESES-SSEDNDSSSSSSDSESESSSEDSDSSSSSSDSESESSSKDSDS 272
Query: 924 RHNSSGSRECLDSGS 938
NSS S + S S
Sbjct: 273 SSNSSDSEDDSSSDS 287
>SPBC28F2.10c |kap1||chromatin remodeling complex subunit Ngg1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 551
Score = 29.9 bits (64), Expect = 2.5
Identities = 29/106 (27%), Positives = 51/106 (48%), Gaps = 8/106 (7%)
Query: 730 SQIEAKIEDIKSVMKSLQIDKTRG-SVSPRDSNGTVEIKLEDSSDRYAALREITITEPPD 788
+++E K+E+ K +I + R S SP++S K S+ + EI+ P+
Sbjct: 93 NKVEEKVEEFKEDNVEQEIKQKRSLSESPQESMLEKVSKKPKVSEAHN--EEIS----PE 146
Query: 789 EFESLPPEIPKERKKSDEKSDGFDNSDFFDCIDNSSLSFTHVEDAF 834
E++ E+ K DE++ G + D + S LSF V+D+F
Sbjct: 147 NVETIENELDLPVKGKDEQTTGLVYKNANDLLTGSLLSFI-VDDSF 191
>SPBC3F6.05 |rga1||GTPase activating protein Rga1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1150
Score = 29.9 bits (64), Expect = 2.5
Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Query: 863 RELRPPERVSTGSISDVVSGSSPDTKVQTSSSSRDVSPWDEDLPPVTRLPRPPSHHRDRE 922
R+ +P RV+T SDV SGS SS+++D + + D P ++ P H R+
Sbjct: 1092 RKRQPIRRVTTNLTSDVPSGSEVADTNSLSSTTKDEASPNSDAQPKPQV--KPQHAVIRD 1149
Query: 923 S 923
S
Sbjct: 1150 S 1150
>SPBC25H2.11c |||bromodomain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 979
Score = 29.5 bits (63), Expect = 3.3
Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
Query: 607 EASTDFKPQFEDDFAPSTETNGTFVANFDDFDKKANPSFDRYAVFREIQEQELKAKSILD 666
EAS + + + A +E G + + DDFD+ + + ++Q+ + KSI+D
Sbjct: 123 EASLAEEEERKKGDAKKSEATGRQLFDDDDFDESDAEDSSKATITLDLQKDKSLRKSIID 182
Query: 667 PSDGEIDNKTDSDCKELTAID 687
+ID D D AI+
Sbjct: 183 LKSVDID---DMDTSGFAAIE 200
>SPAC1486.03c |||RNA-binding splicing factor|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 797
Score = 29.5 bits (63), Expect = 3.3
Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 11/80 (13%)
Query: 670 GEIDNKTDSDCKELTAIDDLIKSKQDREETK-----ELSKSPLKSLDELTLD--SFNMFR 722
G + +T+ KE A ++ S+ ++ K E K PLKS +E++ D S+N+ R
Sbjct: 157 GAVRERTEKQRKEAIARGEISDSEDEKHTVKQKPLREKKKKPLKSSEEISKDMGSYNLPR 216
Query: 723 KSVSPKPSQIEAKIEDIKSV 742
S I+A + D K +
Sbjct: 217 FLA----SLIDASLNDTKEI 232
>SPBC30B4.02c |||R3H and G-patch domain, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 29.5 bits (63), Expect = 3.3
Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Query: 444 DEPKTVPKDSALEKLEPSLEGARNVFNGPLQVS--LPPEPAPKSPRLQRQADRKTKPRLS 501
DE P EK+ S +GA+ L+ LP + +L+R+A + R+
Sbjct: 391 DEEYNNPSTQKTEKVSQSKKGAKVKEEKGLKKDRKLPKKMRKAQKKLERKAGKAVAARMG 450
Query: 502 SAGTNSSEDE 511
A +NS +DE
Sbjct: 451 DAFSNSLDDE 460
>SPAC4F10.08 |mug126||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 436
Score = 28.7 bits (61), Expect = 5.7
Identities = 21/94 (22%), Positives = 43/94 (45%), Gaps = 3/94 (3%)
Query: 727 PKPSQIEAKIEDIKSVMKSLQIDKTRGSVSPRDSNGTVEIKLEDSSDRYAALREITITEP 786
P+ Q++++ E + +S Q DK + S + KLE + A ++T EP
Sbjct: 140 PRNPQLDSQYEAFITQGES-QTDKKKTSTVQEEELQNAGKKLETVQENPQAYSKVTQQEP 198
Query: 787 PDEFESLP--PEIPKERKKSDEKSDGFDNSDFFD 818
+++P P+ ++ S+++ FD + D
Sbjct: 199 QAGQKAVPQEPQANQQETSSNQEESSFDRQETQD 232
>SPCC338.04 |cid2||caffeine induced death protein
Cid2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 167
Score = 28.7 bits (61), Expect = 5.7
Identities = 15/60 (25%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 689 LIKSKQDREETKELSKSPLKSLDELTLDSFNMFRKSVSPKPSQIEAKI---EDIKSVMKS 745
+++S+ D++ + SKSPLKS +L S + + P +++ ++ E+++ V++S
Sbjct: 77 IVRSQLDQD--RNTSKSPLKSQQQLPSSSTTQVSERLDPYAKEVQVQLSPPEEVQIVLQS 134
>SPCC622.15c |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 557
Score = 28.7 bits (61), Expect = 5.7
Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Query: 586 EKETSISIIPRKLDST-IPSAPEASTDFKPQFEDDFAPSTETNGTFVANFDD 636
EKE I+ + + +PS +ASTD K + E + + E G NFD+
Sbjct: 31 EKEAVERIVQEENQNPEVPSNDDASTDIKSRKEGNMKVTAEEIGLETENFDE 82
>SPAC27F1.06c |||FKBP-type peptidyl-prolyl cis-trans isomerase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 362
Score = 28.7 bits (61), Expect = 5.7
Identities = 27/126 (21%), Positives = 50/126 (39%), Gaps = 4/126 (3%)
Query: 623 STETNGTFVANFDDFDKKANPSFDRYAVFREIQEQELKAKSILDPSDGEIDNKTDSDCKE 682
S++ F+ D+F D E +E+E A+ SD E + + + E
Sbjct: 132 SSDLENDFLYGADEFSSDEEEMDDISVTSSEEEEEENGARIEELNSDEEDAEQAEEEILE 191
Query: 683 LTAIDDLIKSKQDREETKELSKSPLKSLDELTLDSFNMFRKSVSP--KPSQIEAKIEDIK 740
D + K +++ K+ K ++D DS N ++ P + Q E K + K
Sbjct: 192 KPVPKDEVAEKHSKDKLKKEEKEKKTAVD--VSDSVNGKKRKTEPAGEGEQTEKKSKSTK 249
Query: 741 SVMKSL 746
+ K +
Sbjct: 250 TYPKQV 255
>SPBC21D10.06c |map4||cell agglutination protein
Map4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 948
Score = 28.7 bits (61), Expect = 5.7
Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 335 FQDLKNPPKKVLKDLVPVAQSLISDATP-VANECKADYGRATTMTSLSRHS 384
F L + KK+ +P + +I+ TP V+N ++ + +T TS HS
Sbjct: 405 FPSLTSSTKKIPSTTLPTSSKMITTTTPSVSNNTQSSFLIISTFTSSYEHS 455
>SPBP23A10.13 |orc4|orp4|origin recognition complex subunit
Orc4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 972
Score = 28.3 bits (60), Expect = 7.6
Identities = 26/89 (29%), Positives = 38/89 (42%), Gaps = 8/89 (8%)
Query: 205 ELSSLRRGLTQVEGLTPSTDPFGDSFIVTSQKGLLPPPPSGASTRGRSTPATQRSTFSPS 264
E+ ++ GLT + S P +S S LLP +S R P ++S F+P
Sbjct: 440 EIRNITPGLTDSSVHSSSATPQSESSSPNSVSPLLP-----SSDR---LPLLRQSQFTPP 491
Query: 265 KTAPTTLPFDIVPASSDLETTPAPIVDSV 293
P I P S + P P+V+SV
Sbjct: 492 PKKPNFEVAIISPKKSQHKLYPNPVVESV 520
>SPBC337.06c |cwf15||complexed with Cdc5 protein Cwf15
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 265
Score = 27.9 bits (59), Expect = 10.0
Identities = 25/107 (23%), Positives = 50/107 (46%), Gaps = 3/107 (2%)
Query: 609 STDFKPQFEDDFAPSTETNGTFVANFD--DFDKKANPSFDRYAVFREIQEQELKAKSILD 666
STD KP + + T A+ D D D + S V + ++ E ++ +D
Sbjct: 91 STDDKPNNDVEVDYQELLRQTLEADEDASDSDDSVDSSNKNSEVSIKRRKTESNSQESVD 150
Query: 667 PSDGEI-DNKTDSDCKELTAIDDLIKSKQDREETKELSKSPLKSLDE 712
S+ E D ++DS+ + + +L KQ+R+ + L + ++L++
Sbjct: 151 SSNSESSDEESDSEDETQQLLRELENIKQERKREQMLQEEKNRALEQ 197
>SPAC823.12 |||zinc finger protein Pep5/Vps11 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 906
Score = 27.9 bits (59), Expect = 10.0
Identities = 16/49 (32%), Positives = 23/49 (46%)
Query: 721 FRKSVSPKPSQIEAKIEDIKSVMKSLQIDKTRGSVSPRDSNGTVEIKLE 769
+R+S+S + IE DI+ + L I +TR V T I LE
Sbjct: 831 YRESISKQNEAIEMGKRDIEEITSQLSILRTRAFVVQESKCSTCGIDLE 879
>SPAC2G11.05c |||BRO1 domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 701
Score = 27.9 bits (59), Expect = 10.0
Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 4/74 (5%)
Query: 654 IQEQELKAKSILDPSDGEIDNKTDSDCKELTAIDDLIKSKQDREETKELSKSPLKSLDEL 713
I+E E K+ILD + ID T ++L A+ + IKS D E S +++ E+
Sbjct: 356 IEEHE---KNILDAAVKSIDCLTKEGTEKLFALMEEIKSVNDNRYITETSNKVMENFTEI 412
Query: 714 -TLDSFNMFRKSVS 726
L R S
Sbjct: 413 KNLGGLEFLRSEAS 426
>SPAC4D7.01c |sec71|sec7a, SPAP8A3.15c|Sec7
domain|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1811
Score = 27.9 bits (59), Expect = 10.0
Identities = 20/76 (26%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Query: 674 NKTDSDCKELTAIDDLIKSKQDREE-TKELSKSPLKSLDELTLDSFNMFRKSV-SPKPSQ 731
N+T + E+TA DD +S EE K S+ P ++ ++D+ +++ + PSQ
Sbjct: 633 NQTFAPTVEITAKDDETESTSKGEEPQKSKSEPPSAGINSTSMDNLESSGQALATDDPSQ 692
Query: 732 IEAKIEDIKSVMKSLQ 747
E K + +++Q
Sbjct: 693 FENLKHRKKQLQEAIQ 708
>SPAC1002.02 |mug31||nucleoporin Pom34 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 229
Score = 27.9 bits (59), Expect = 10.0
Identities = 14/42 (33%), Positives = 21/42 (50%)
Query: 226 FGDSFIVTSQKGLLPPPPSGASTRGRSTPATQRSTFSPSKTA 267
F D + Q+ L+ P G+++ TP R FSPS+ A
Sbjct: 175 FDDLQLTPLQRKLMGLPEGGSTSGKHLTPPRYRPNFSPSRKA 216
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.312 0.130 0.373
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,508,141
Number of Sequences: 5004
Number of extensions: 235486
Number of successful extensions: 749
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 27
Number of HSP's that attempted gapping in prelim test: 697
Number of HSP's gapped (non-prelim): 79
length of query: 1322
length of database: 2,362,478
effective HSP length: 81
effective length of query: 1241
effective length of database: 1,957,154
effective search space: 2428828114
effective search space used: 2428828114
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 59 (27.9 bits)
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