GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001866-TA|BGIBMGA001866-PA|IPR006020|Phosphotyrosine
interaction region
         (1322 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    29   0.33 
X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor pro...    27   0.77 
X72576-1|CAA51168.1|  144|Apis mellifera Apidaecin precursor pro...    27   1.0  
AF442148-1|AAL35349.1|  199|Apis mellifera apidaecin precursor p...    27   1.0  

>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 28.7 bits (61), Expect = 0.33
 Identities = 10/20 (50%), Positives = 15/20 (75%)

Query: 479 PEPAPKSPRLQRQADRKTKP 498
           P+P P  PRL+R+A+ K +P
Sbjct: 51  PQPRPPHPRLRREAEPKAEP 70



 Score = 27.5 bits (58), Expect = 0.77
 Identities = 9/20 (45%), Positives = 15/20 (75%)

Query: 479 PEPAPKSPRLQRQADRKTKP 498
           P+P P  PRL+R+A+ + +P
Sbjct: 79  PQPRPPHPRLRREAESEAEP 98


>X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor
           protein.
          Length = 283

 Score = 27.5 bits (58), Expect = 0.77
 Identities = 10/20 (50%), Positives = 14/20 (70%)

Query: 479 PEPAPKSPRLQRQADRKTKP 498
           P+P P  PRL+R+A  + KP
Sbjct: 246 PQPRPPHPRLRREAKPEAKP 265



 Score = 27.1 bits (57), Expect = 1.0
 Identities = 9/20 (45%), Positives = 15/20 (75%)

Query: 479 PEPAPKSPRLQRQADRKTKP 498
           P+P P  PRL+R+A+ + +P
Sbjct: 50  PQPRPPHPRLRREAEPEAEP 69



 Score = 27.1 bits (57), Expect = 1.0
 Identities = 9/20 (45%), Positives = 15/20 (75%)

Query: 479 PEPAPKSPRLQRQADRKTKP 498
           P+P P  PRL+R+A+ + +P
Sbjct: 78  PQPRPPHPRLRREAELEAEP 97



 Score = 27.1 bits (57), Expect = 1.0
 Identities = 9/20 (45%), Positives = 15/20 (75%)

Query: 479 PEPAPKSPRLQRQADRKTKP 498
           P+P P  PRL+R+A+ + +P
Sbjct: 134 PQPRPPHPRLRREAELEAEP 153



 Score = 27.1 bits (57), Expect = 1.0
 Identities = 9/20 (45%), Positives = 15/20 (75%)

Query: 479 PEPAPKSPRLQRQADRKTKP 498
           P+P P  PRL+R+A+ + +P
Sbjct: 190 PQPRPPHPRLRREAEPEAEP 209



 Score = 27.1 bits (57), Expect = 1.0
 Identities = 9/20 (45%), Positives = 15/20 (75%)

Query: 479 PEPAPKSPRLQRQADRKTKP 498
           P+P P  PRL+R+A+ + +P
Sbjct: 218 PQPRPPHPRLRREAEPEAEP 237



 Score = 25.4 bits (53), Expect = 3.1
 Identities = 11/29 (37%), Positives = 19/29 (65%), Gaps = 3/29 (10%)

Query: 470 NGPLQVSLPPEPAPKSPRLQRQADRKTKP 498
           N P+ +S   +P P  PRL+R+A+ + +P
Sbjct: 100 NRPVYIS---QPRPPHPRLRREAEPEAEP 125



 Score = 25.4 bits (53), Expect = 3.1
 Identities = 11/29 (37%), Positives = 19/29 (65%), Gaps = 3/29 (10%)

Query: 470 NGPLQVSLPPEPAPKSPRLQRQADRKTKP 498
           N P+ +S   +P P  PRL+R+A+ + +P
Sbjct: 156 NRPVYIS---QPRPPHPRLRREAEPEAEP 181


>X72576-1|CAA51168.1|  144|Apis mellifera Apidaecin precursor
           protein.
          Length = 144

 Score = 27.1 bits (57), Expect = 1.0
 Identities = 9/20 (45%), Positives = 15/20 (75%)

Query: 479 PEPAPKSPRLQRQADRKTKP 498
           P+P P  PRL+R+A+ + +P
Sbjct: 51  PQPRPPHPRLRREAEPEAEP 70



 Score = 27.1 bits (57), Expect = 1.0
 Identities = 9/20 (45%), Positives = 15/20 (75%)

Query: 479 PEPAPKSPRLQRQADRKTKP 498
           P+P P  PRL+R+A+ + +P
Sbjct: 79  PQPRPPHPRLRREAEPEAEP 98



 Score = 27.1 bits (57), Expect = 1.0
 Identities = 9/20 (45%), Positives = 15/20 (75%)

Query: 479 PEPAPKSPRLQRQADRKTKP 498
           P+P P  PRL+R+A+ + +P
Sbjct: 107 PQPRPPHPRLRREAEPEAEP 126


>AF442148-1|AAL35349.1|  199|Apis mellifera apidaecin precursor
           protein.
          Length = 199

 Score = 27.1 bits (57), Expect = 1.0
 Identities = 9/20 (45%), Positives = 15/20 (75%)

Query: 479 PEPAPKSPRLQRQADRKTKP 498
           P+P P  PRL+R+A+ + +P
Sbjct: 22  PQPRPPHPRLRREAEPEAEP 41



 Score = 27.1 bits (57), Expect = 1.0
 Identities = 9/20 (45%), Positives = 15/20 (75%)

Query: 479 PEPAPKSPRLQRQADRKTKP 498
           P+P P  PRL+R+A+ + +P
Sbjct: 50  PQPRPPHPRLRREAEPEAEP 69



 Score = 27.1 bits (57), Expect = 1.0
 Identities = 9/20 (45%), Positives = 15/20 (75%)

Query: 479 PEPAPKSPRLQRQADRKTKP 498
           P+P P  PRL+R+A+ + +P
Sbjct: 78  PQPRPPHPRLRREAEPEAEP 97



 Score = 27.1 bits (57), Expect = 1.0
 Identities = 9/20 (45%), Positives = 15/20 (75%)

Query: 479 PEPAPKSPRLQRQADRKTKP 498
           P+P P  PRL+R+A+ + +P
Sbjct: 106 PQPRPPHPRLRREAEPEAEP 125



 Score = 27.1 bits (57), Expect = 1.0
 Identities = 9/20 (45%), Positives = 15/20 (75%)

Query: 479 PEPAPKSPRLQRQADRKTKP 498
           P+P P  PRL+R+A+ + +P
Sbjct: 162 PQPRPPHPRLRREAEPEAEP 181



 Score = 25.8 bits (54), Expect = 2.3
 Identities = 9/20 (45%), Positives = 14/20 (70%)

Query: 479 PEPAPKSPRLQRQADRKTKP 498
           P+P P  PRL+R+A  + +P
Sbjct: 134 PQPRPPHPRLRREAKPEAEP 153


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.312    0.130    0.373 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 345,361
Number of Sequences: 429
Number of extensions: 15146
Number of successful extensions: 42
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 21
Number of HSP's gapped (non-prelim): 21
length of query: 1322
length of database: 140,377
effective HSP length: 66
effective length of query: 1256
effective length of database: 112,063
effective search space: 140751128
effective search space used: 140751128
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 49 (23.8 bits)