GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001865-TA|BGIBMGA001865-PA|IPR008089|Nucleotide sugar
epimerase, IPR005886|UDP-glucose 4-epimerase, IPR001509|NAD-dependent
epimerase/dehydratase
         (234 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    22   4.7  
AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    22   4.7  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    22   4.7  
AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    21   8.2  
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      21   8.2  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      21   8.2  

>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 11/31 (35%), Positives = 16/31 (51%)

Query: 113 RDYIHVMDLASGHVAALNLLSQTHIRLKVYN 143
           R Y  +  L + H+AA N+LS     L + N
Sbjct: 71  RLYYPIYKLNAAHLAAANILSPEDCELVLSN 101


>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 8/19 (42%), Positives = 13/19 (68%)

Query: 150 VSVKELVNVFERVTKAKVP 168
           +SV+  +NVF+R+   K P
Sbjct: 401 ISVETKLNVFKRIGNIKAP 419


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 11/31 (35%), Positives = 16/31 (51%)

Query: 113 RDYIHVMDLASGHVAALNLLSQTHIRLKVYN 143
           R Y  +  L + H+AA N+LS     L + N
Sbjct: 71  RLYYPIYKLNAAHLAAANILSPEDCELVLSN 101


>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 8/19 (42%), Positives = 13/19 (68%)

Query: 150 VSVKELVNVFERVTKAKVP 168
           +SV+  +NVF+R+   K P
Sbjct: 403 MSVETKLNVFKRIGNIKAP 421


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 8/19 (42%), Positives = 13/19 (68%)

Query: 150 VSVKELVNVFERVTKAKVP 168
           +SV+  +NVF+R+   K P
Sbjct: 401 MSVETKLNVFKRIGNIKAP 419


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 8/19 (42%), Positives = 13/19 (68%)

Query: 150 VSVKELVNVFERVTKAKVP 168
           +SV+  +NVF+R+   K P
Sbjct: 403 MSVETKLNVFKRIGNIKAP 421


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.317    0.134    0.407 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,005
Number of Sequences: 317
Number of extensions: 2503
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of query: 234
length of database: 114,650
effective HSP length: 55
effective length of query: 179
effective length of database: 97,215
effective search space: 17401485
effective search space used: 17401485
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 42 (21.0 bits)