Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001865-TA|BGIBMGA001865-PA|IPR008089|Nucleotide sugar
epimerase, IPR005886|UDP-glucose 4-epimerase, IPR001509|NAD-dependent
epimerase/dehydratase
(234 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g23920.1 68417.m03440 UDP-glucose 4-epimerase, putative / UDP... 271 2e-73
At4g10960.1 68417.m01781 UDP-glucose 4-epimerase, putative / UDP... 270 4e-73
At1g64440.1 68414.m07304 UDP-glucose 4-epimerase, putative / UDP... 261 3e-70
At1g63180.1 68414.m07140 UDP-glucose 4-epimerase, putative / UDP... 259 1e-69
At1g12780.1 68414.m01484 UDP-glucose 4-epimerase / UDP-galactose... 252 2e-67
At1g30620.1 68414.m03745 UDP-D-xylose 4-epimerase, putative (MUR... 169 2e-42
At5g44480.1 68418.m05450 NAD-dependent epimerase/dehydratase fam... 165 2e-41
At2g34850.1 68415.m04279 NAD-dependent epimerase/dehydratase fam... 165 3e-41
At4g20460.1 68417.m02985 NAD-dependent epimerase/dehydratase fam... 162 2e-40
At2g45310.1 68415.m05639 NAD-dependent epimerase/dehydratase fam... 62 4e-10
At4g12250.1 68417.m01942 NAD-dependent epimerase/dehydratase fam... 58 4e-09
At4g00110.1 68417.m00011 NAD-dependent epimerase/dehydratase fam... 57 9e-09
At1g02000.1 68414.m00118 NAD-dependent epimerase/dehydratase fam... 56 2e-08
At3g23820.1 68416.m02994 NAD-dependent epimerase/dehydratase fam... 54 6e-08
At4g30440.1 68417.m04323 NAD-dependent epimerase/dehydratase fam... 51 8e-07
At1g78570.1 68414.m09157 NAD-dependent epimerase/dehydratase fam... 48 7e-06
At3g53520.2 68416.m05910 NAD-dependent epimerase/dehydratase fam... 46 2e-05
At3g62830.1 68416.m07059 NAD-dependent epimerase/dehydratase fam... 43 2e-04
At2g47650.1 68415.m05950 NAD-dependent epimerase/dehydratase fam... 43 2e-04
At3g14790.1 68416.m01869 NAD-dependent epimerase/dehydratase fam... 43 2e-04
At1g17890.3 68414.m02214 GDP-4-keto-6-deoxy-D-mannose-3,5-epimer... 40 0.001
At1g17890.2 68414.m02213 GDP-4-keto-6-deoxy-D-mannose-3,5-epimer... 40 0.001
At1g17890.1 68414.m02215 GDP-4-keto-6-deoxy-D-mannose-3,5-epimer... 40 0.001
At2g28760.2 68415.m03498 NAD-dependent epimerase/dehydratase fam... 39 0.003
At2g28760.1 68415.m03497 NAD-dependent epimerase/dehydratase fam... 39 0.003
At1g73250.1 68414.m08477 GDP-4-keto-6-deoxy-D-mannose-3,5-epimer... 38 0.004
At5g28840.1 68418.m03547 NAD-dependent epimerase/dehydratase fam... 38 0.008
At1g53500.1 68414.m06066 NAD-dependent epimerase/dehydratase fam... 36 0.018
At5g59290.1 68418.m07429 UDP-glucuronic acid decarboxylase (UXS3... 35 0.041
At3g46440.1 68416.m05034 NAD-dependent epimerase/dehydratase fam... 33 0.22
At1g17455.1 68414.m02138 expressed protein 30 1.2
At3g28530.1 68416.m03563 expressed protein 29 2.7
At5g22780.1 68418.m02663 adaptin family protein similar to SP|P1... 29 3.6
At3g51160.1 68416.m05602 GDP-D-mannose-4,6-dehydratase (MUR1) al... 28 4.7
At2g47390.1 68415.m05915 expressed protein 28 4.7
At5g22770.3 68418.m02661 adaptin family protein similar to SP|P1... 27 8.3
At5g22770.2 68418.m02660 adaptin family protein similar to SP|P1... 27 8.3
At5g22770.1 68418.m02659 adaptin family protein similar to SP|P1... 27 8.3
>At4g23920.1 68417.m03440 UDP-glucose 4-epimerase, putative /
UDP-galactose 4-epimerase, putative / Galactowaldenase,
putative similar to UDP-galactose 4-epimerase from
Arabidopsis thaliana SP|Q42605, Cyamopsis tetragonoloba
GI:3021357 [AJ005082]
Length = 350
Score = 271 bits (665), Expect = 2e-73
Identities = 127/219 (57%), Positives = 152/219 (69%), Gaps = 1/219 (0%)
Query: 1 MVFSSSCTVYGEPEHLPITETHPTGSITNVYGRTKYFIEEMLKDLSAADDKWNIISLRYF 60
+VFSSS TVYG P+ +P TE P S TN YGRTK FIEE+ +D+ +D +W II LRYF
Sbjct: 124 LVFSSSATVYGWPKEVPCTEESPI-SATNPYGRTKLFIEEICRDVHRSDSEWKIILLRYF 182
Query: 61 NPVGAHPSGLIGEDPTKEFTNLMPFLAQVALGKKPVLTVFGTDYNTPDGTGIRDYIHVMD 120
NPVGAHPSG IGEDP NLMP++ QVA+G++P LTVFGTDY T DGTG+RDYIHVMD
Sbjct: 183 NPVGAHPSGYIGEDPLGVPNNLMPYVQQVAVGRRPHLTVFGTDYKTKDGTGVRDYIHVMD 242
Query: 121 LASGHVAALNLLSQTHIRLKVYNLGTGKGVSVKELVNVFERVTKAKVPLKYVDRRLGDIS 180
LA GH+AAL L I +VYNLGTG G SV E+V FE+ + K+PL RR GD
Sbjct: 243 LADGHIAALRKLDDLKISCEVYNLGTGNGTSVLEMVAAFEKASGKKIPLVMAGRRPGDAE 302
Query: 181 AMWADTSLAKEELGWSTQLTIEEMCTDFWRWQTMNPDGY 219
++A T A+ EL W + IEEMC D W W + NP GY
Sbjct: 303 VVYASTEKAERELNWKAKNGIEEMCRDLWNWASNNPYGY 341
>At4g10960.1 68417.m01781 UDP-glucose 4-epimerase, putative /
UDP-galactose 4-epimerase, putative / Galactowaldenase,
putative similar to UDP-galactose 4-epimerase from
Arabidopsis thaliana SP|Q42605, Cyamopsis tetragonoloba
GI:3021357 [AJ005082]
Length = 351
Score = 270 bits (663), Expect = 4e-73
Identities = 125/224 (55%), Positives = 155/224 (69%), Gaps = 1/224 (0%)
Query: 1 MVFSSSCTVYGEPEHLPITETHPTGSITNVYGRTKYFIEEMLKDLSAADDKWNIISLRYF 60
+VFSSS TVYG P+ +P TE P ++ N YGRTK FIEE+ +D+ +D +W II LRYF
Sbjct: 125 LVFSSSATVYGSPKEVPCTEEFPISAL-NPYGRTKLFIEEICRDVYGSDPEWKIILLRYF 183
Query: 61 NPVGAHPSGLIGEDPTKEFTNLMPFLAQVALGKKPVLTVFGTDYNTPDGTGIRDYIHVMD 120
NPVGAHPSG IGEDP NLMPF+ QVA+G++P LTVFG DYNT DGTG+RDYIHV+D
Sbjct: 184 NPVGAHPSGDIGEDPRGIPNNLMPFVQQVAVGRRPHLTVFGNDYNTKDGTGVRDYIHVID 243
Query: 121 LASGHVAALNLLSQTHIRLKVYNLGTGKGVSVKELVNVFERVTKAKVPLKYVDRRLGDIS 180
LA GH+AAL L I +VYNLGTG G SV E+V+ FE+ + K+PL RR GD
Sbjct: 244 LADGHIAALRKLEDCKIGCEVYNLGTGNGTSVLEMVDAFEKASGKKIPLVIAGRRPGDAE 303
Query: 181 AMWADTSLAKEELGWSTQLTIEEMCTDFWRWQTMNPDGYPKKTK 224
++A T A+ EL W + IEEMC D W W + NP GY ++
Sbjct: 304 VVYASTERAESELNWKAKYGIEEMCRDLWNWASNNPYGYDSSSE 347
>At1g64440.1 68414.m07304 UDP-glucose 4-epimerase, putative /
UDP-galactose 4-epimerase, putative / Galactowaldenase,
putative similar to UDP-galactose 4-epimerase from
Arabidopsis thaliana SP|Q42605, Cyamopsis tetragonoloba
GI:3021357 [AJ005082] (Plant Sci. 142, 147-154 (1999))
Length = 348
Score = 261 bits (639), Expect = 3e-70
Identities = 120/226 (53%), Positives = 150/226 (66%), Gaps = 1/226 (0%)
Query: 1 MVFSSSCTVYGEPEHLPITETHPTGSITNVYGRTKYFIEEMLKDLSAADDKWNIISLRYF 60
+VFSSS TVYG P+ +P TE P ++ YGRTK FIE++ +D+ D +W II LRYF
Sbjct: 124 LVFSSSATVYGWPKEVPCTEESPLSGMSP-YGRTKLFIEDICRDVQRGDPEWRIIMLRYF 182
Query: 61 NPVGAHPSGLIGEDPTKEFTNLMPFLAQVALGKKPVLTVFGTDYNTPDGTGIRDYIHVMD 120
NPVGAHPSG IGEDP NLMP++ QV +G+ P L ++GTDY T DGTG+RDYIHV+D
Sbjct: 183 NPVGAHPSGRIGEDPCGTPNNLMPYVQQVVVGRLPNLKIYGTDYTTKDGTGVRDYIHVVD 242
Query: 121 LASGHVAALNLLSQTHIRLKVYNLGTGKGVSVKELVNVFERVTKAKVPLKYVDRRLGDIS 180
LA GH+ AL L T I +VYNLGTGKG +V E+V+ FE+ + K+PL V RR GD
Sbjct: 243 LADGHICALQKLDDTEIGCEVYNLGTGKGTTVLEMVDAFEKASGMKIPLVKVGRRPGDAE 302
Query: 181 AMWADTSLAKEELGWSTQLTIEEMCTDFWRWQTMNPDGYPKKTKKT 226
++A T A+ EL W IEEMC D W W + NP GY T
Sbjct: 303 TVYASTEKAERELNWKANFGIEEMCRDQWNWASNNPFGYGSSPNST 348
>At1g63180.1 68414.m07140 UDP-glucose 4-epimerase, putative /
UDP-galactose 4-epimerase, putative / Galactowaldenase,
putative strong similarity to SP|Q42605 [GI:1143392]
from [Arabidopsis thaliana] (Arch. Biochem. Biophys. 327
(1), 27-34 (1996))
Length = 351
Score = 259 bits (634), Expect = 1e-69
Identities = 123/223 (55%), Positives = 156/223 (69%), Gaps = 2/223 (0%)
Query: 1 MVFSSSCTVYGEPEHLPITETHPTGSITNVYGRTKYFIEEMLKDLSAADDKWNIISLRYF 60
MVFSSS TVYG+PE +P E ++ N YGRTK F+EE+ +D+ AA+ +W II LRYF
Sbjct: 129 MVFSSSATVYGQPEIVPCVEDFELQAM-NPYGRTKLFLEEIARDIHAAEPEWKIILLRYF 187
Query: 61 NPVGAHPSGLIGEDPTKEFTNLMPFLAQVALGKKPVLTVFGTDYNTPDGTGIRDYIHVMD 120
NPVGAH SG IGEDP NLMP++ QVA+G+ P L VFG DY T DG+ +RDYIHVMD
Sbjct: 188 NPVGAHESGRIGEDPKGIPNNLMPYIQQVAVGRLPELNVFGHDYPTMDGSAVRDYIHVMD 247
Query: 121 LASGHVAALN-LLSQTHIRLKVYNLGTGKGVSVKELVNVFERVTKAKVPLKYVDRRLGDI 179
LA GHVAALN L S + I YNLGTG+G SV E+V+ FE+ + K+P+K RR GD
Sbjct: 248 LADGHVAALNKLFSDSKIGCTAYNLGTGQGTSVLEMVSSFEKASGKKIPIKLCPRRAGDA 307
Query: 180 SAMWADTSLAKEELGWSTQLTIEEMCTDFWRWQTMNPDGYPKK 222
+A++A T A++ELGW + ++EMC D W W NP G+ KK
Sbjct: 308 TAVYASTQKAEKELGWKAKYGVDEMCRDQWNWANKNPWGFQKK 350
>At1g12780.1 68414.m01484 UDP-glucose 4-epimerase / UDP-galactose
4-epimerase / Galactowaldenase identical to SP|Q42605
[GB:CAA90941] from [Arabidopsis thaliana] (Arch.
Biochem. Biophys. 327 (1), 27-34 (1996))
Length = 351
Score = 252 bits (616), Expect = 2e-67
Identities = 118/223 (52%), Positives = 152/223 (68%), Gaps = 2/223 (0%)
Query: 1 MVFSSSCTVYGEPEHLPITETHPTGSITNVYGRTKYFIEEMLKDLSAADDKWNIISLRYF 60
MVFSSS TVYG+PE +P E ++ N YGRTK F+EE+ +D+ A+ +W II LRYF
Sbjct: 129 MVFSSSATVYGQPEKIPCMEDFELKAM-NPYGRTKLFLEEIARDIQKAEPEWRIILLRYF 187
Query: 61 NPVGAHPSGLIGEDPTKEFTNLMPFLAQVALGKKPVLTVFGTDYNTPDGTGIRDYIHVMD 120
NPVGAH SG IGEDP NLMP++ QVA+G+ P L V+G DY T DG+ +RDYIHVMD
Sbjct: 188 NPVGAHESGSIGEDPKGIPNNLMPYIQQVAVGRLPELNVYGHDYPTEDGSAVRDYIHVMD 247
Query: 121 LASGHVAAL-NLLSQTHIRLKVYNLGTGKGVSVKELVNVFERVTKAKVPLKYVDRRLGDI 179
LA GH+AAL L + I YNLGTG+G SV E+V FE+ + K+P+K RR GD
Sbjct: 248 LADGHIAALRKLFADPKIGCTAYNLGTGQGTSVLEMVAAFEKASGKKIPIKLCPRRSGDA 307
Query: 180 SAMWADTSLAKEELGWSTQLTIEEMCTDFWRWQTMNPDGYPKK 222
+A++A T A++ELGW + ++EMC D W+W NP GY K
Sbjct: 308 TAVYASTEKAEKELGWKAKYGVDEMCRDQWKWANNNPWGYQNK 350
>At1g30620.1 68414.m03745 UDP-D-xylose 4-epimerase, putative (MUR4)
similar to SP|P55180 UDP-glucose 4-epimerase (EC
5.1.3.2) from Bacillus subtilis, GI:3021357
UDP-galactose 4-epimerase from Cyamopsis tetragonoloba;
contains Pfam profile PF01370 NAD dependent
epimerase/dehydratase family; contains TIGRfam profile
TIGR01179: UDP-glucose 4-epimerase
Length = 419
Score = 169 bits (410), Expect = 2e-42
Identities = 88/232 (37%), Positives = 131/232 (56%), Gaps = 8/232 (3%)
Query: 1 MVFSSSCTVYGEPEHLPITETHPTGSITNVYGRTKYFIEEMLKDLSAADDKWNIISLRYF 60
+++SS+C YGEP+ +PITE P I N YG+ K E+++ D S D ++ LRYF
Sbjct: 191 LIYSSTCATYGEPDIMPITEETPQVPI-NPYGKAKKMAEDIILDFSKNSDM-AVMILRYF 248
Query: 61 NPVGAHPSGLIGEDPT---KEFTNLMPFLAQVALGKKPVLTVFGTDYNTPDGTGIRDYIH 117
N +G+ P G +GE P +E + A G P L + GTDY T DGT +RDYI
Sbjct: 249 NVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIMPGLQIKGTDYKTADGTCVRDYID 308
Query: 118 VMDLASGHVAALNLLSQTHIRLKVYNLGTGKGVSVKELVNVFERVTKAKVPLKYVDRRLG 177
V DL HV AL ++ +YN+GTGKG SVKE V ++ T ++ + Y+ RR G
Sbjct: 309 VTDLVDAHVKALQKAKPR--KVGIYNVGTGKGSSVKEFVEACKKATGVEIKIDYLPRRAG 366
Query: 178 DISAMWADTSLAKEELGWSTQLT-IEEMCTDFWRWQTMNPDGYPKKTKKTEI 228
D + +++D S ++EL W+ + T ++E WRWQ ++ +GY T +
Sbjct: 367 DYAEVYSDPSKIRKELNWTAKHTNLKESLETAWRWQKLHRNGYGLTTSSVSV 418
>At5g44480.1 68418.m05450 NAD-dependent epimerase/dehydratase family
protein similar to SP|P55180 UDP-glucose 4-epimerase (EC
5.1.3.2) from Bacillus subtilis, GI:3021357
UDP-galactose 4-epimerase from Cyamopsis tetragonoloba;
contains Pfam profile PF01370 NAD dependent
epimerase/dehydratase family
Length = 436
Score = 165 bits (402), Expect = 2e-41
Identities = 88/223 (39%), Positives = 127/223 (56%), Gaps = 8/223 (3%)
Query: 1 MVFSSSCTVYGEPEHLPITETHPTGSITNVYGRTKYFIEEMLKDLSAADDKWNIISLRYF 60
+++SS+C YGEPE +PITE P I N YG+ K E+M+ D S D ++ LRYF
Sbjct: 215 LIYSSTCATYGEPEKMPITEDTPQVPI-NPYGKAKKMAEDMILDFSKNSDM-AVMILRYF 272
Query: 61 NPVGAHPSGLIGEDPTKEFTN---LMPFLAQVALGKKPVLTVFGTDYNTPDGTGIRDYIH 117
N +G+ P G +GE P E + A G P L V GTDY T DGT IRDYI
Sbjct: 273 NVIGSDPGGRLGEAPRPELREQGRISGACFDAARGFIPGLQVKGTDYKTSDGTCIRDYID 332
Query: 118 VMDLASGHVAALNLLSQTHIRLKVYNLGTGKGVSVKELVNVFERVTKAKVPLKYVDRRLG 177
V DL HV AL ++ +YN+GTGKG SVKE V ++ T ++ + ++ RR G
Sbjct: 333 VTDLVDAHVKALEKAQPR--KVGIYNVGTGKGRSVKEFVEACKKATGVEIKVDFLPRRPG 390
Query: 178 DISAMWADTSLAKEELGWSTQLT-IEEMCTDFWRWQTMNPDGY 219
D + +++D + ++L W+ + T +++ WRWQ ++P GY
Sbjct: 391 DYAEVYSDPTKILKDLNWTARFTNLQDSLQVAWRWQKIHPHGY 433
>At2g34850.1 68415.m04279 NAD-dependent epimerase/dehydratase family
protein similar to UDP-galactose 4-epimerase from
Cyamopsis tetragonoloba GI:3021357, Lactococcus lactis
GI:3703056; contains Pfam profile PF01370 NAD dependent
epimerase/dehydratase family
Length = 236
Score = 165 bits (400), Expect = 3e-41
Identities = 87/223 (39%), Positives = 127/223 (56%), Gaps = 8/223 (3%)
Query: 1 MVFSSSCTVYGEPEHLPITETHPTGSITNVYGRTKYFIEEMLKDLSAADDKWNIISLRYF 60
+++SS+C YGEPE +PITE P I N YG+ K E+++ D S + ++ LRYF
Sbjct: 9 LIYSSTCATYGEPEKMPITEETPQVPI-NPYGKAKKMAEDIILDFSK-NSIMAVMILRYF 66
Query: 61 NPVGAHPSGLIGEDPTKEFTN---LMPFLAQVALGKKPVLTVFGTDYNTPDGTGIRDYIH 117
N +G+ P G +GE P E + + A G P L + GTDY T DGT +RDYI
Sbjct: 67 NVIGSDPEGRLGEAPRPELSEHGRISGACFDAARGIIPGLQIKGTDYKTVDGTCVRDYID 126
Query: 118 VMDLASGHVAALNLLSQTHIRLKVYNLGTGKGVSVKELVNVFERVTKAKVPLKYVDRRLG 177
V DL HV AL ++ ++N+GTGKG SVKE V ++ T + + Y++RR G
Sbjct: 127 VTDLVDAHVKALEKAKPR--KVGIFNVGTGKGSSVKEFVEACKKATGVDIKVDYLERRAG 184
Query: 178 DISAMWADTSLAKEELGWSTQLT-IEEMCTDFWRWQTMNPDGY 219
D + +++D KEEL W+ + T ++E WRWQ ++ GY
Sbjct: 185 DYAEVYSDPRKIKEELNWTAKHTNLQESLKMAWRWQKLHRSGY 227
>At4g20460.1 68417.m02985 NAD-dependent epimerase/dehydratase family
protein similar to UDP-galactose 4-epimerase from
Cyamopsis tetragonoloba GI:3021357 [EMBL:AJ005082],
Bacillus subtilis SP|P55180; contains Pfam profile
PF01370 NAD dependent epimerase/dehydratase family
Length = 379
Score = 162 bits (393), Expect = 2e-40
Identities = 86/223 (38%), Positives = 124/223 (55%), Gaps = 8/223 (3%)
Query: 1 MVFSSSCTVYGEPEHLPITETHPTGSITNVYGRTKYFIEEMLKDLSAADDKWNIISLRYF 60
+++SS+C YGEP+ +PI E P I N YG+ K E+M+ D S D ++ LRYF
Sbjct: 158 LIYSSTCATYGEPDKMPIVEVTPQVPI-NPYGKAKKMAEDMILDFSKNSDM-AVMILRYF 215
Query: 61 NPVGAHPSGLIGEDPT---KEFTNLMPFLAQVALGKKPVLTVFGTDYNTPDGTGIRDYIH 117
N +G+ P G +GE P +E + A G P L V GTDY T DGT +RDYI
Sbjct: 216 NVIGSDPEGRLGEAPKPELREHGRISGACFDAARGVIPGLQVKGTDYKTGDGTCVRDYID 275
Query: 118 VMDLASGHVAALNLLSQTHIRLKVYNLGTGKGVSVKELVNVFERVTKAKVPLKYVDRRLG 177
V DL HV AL ++ +YN+GTGKG SVKE V ++ T + + ++ RR G
Sbjct: 276 VTDLVDAHVKALEKAKPRNVG--IYNVGTGKGRSVKEFVEACKKATGVDIKVDFLPRRPG 333
Query: 178 DISAMWADTSLAKEELGWSTQLT-IEEMCTDFWRWQTMNPDGY 219
D + +++D + +L WS + T ++E W+WQ +P GY
Sbjct: 334 DYAEVYSDPAKILRDLNWSARYTNLQESLEVAWKWQKTHPHGY 376
>At2g45310.1 68415.m05639 NAD-dependent epimerase/dehydratase family
protein similar to nucleotide sugar epimerase from
Vibrio vulnificus GI:3093975 [PID:g3093975], WbnF
[Escherichia coli] GI:5739472, CAPI protein
{Staphylococcus aureus} SP|P39858; contains Pfam profile
PF01370 NAD dependent epimerase/dehydratase family
Length = 437
Score = 61.7 bits (143), Expect = 4e-10
Identities = 61/221 (27%), Positives = 100/221 (45%), Gaps = 25/221 (11%)
Query: 1 MVFSSSCTVYGEPEHLPITETHPTGSITNVYGRTKYFIEEMLKDLSAADDKWNIISLRYF 60
+V++SS +VYG +P +E T ++Y TK EE+ + ++ LR+F
Sbjct: 218 IVWASSSSVYGLNTKVPFSEKDKTDQPASLYAATKKAGEEIAHTYNHIYGL-SLTGLRFF 276
Query: 61 NPVGAHPSGLIGEDPTKEFTNLMPFLAQVALGKKPVLTVFGTDYNTPDGTGIRDYIHVMD 120
G P G D F F + GK +++F + + GT RD+ ++ D
Sbjct: 277 TVYG--PWGR--PDMAYFF-----FTKDILKGKS--ISIFESANH---GTVARDFTYIDD 322
Query: 121 LASGHVAALNLLSQTH---------IRLKVYNLGTGKGVSVKELVNVFERVTKAKVPLKY 171
+ G +AAL+ ++ +L+V+NLG V V +LV + ER K K
Sbjct: 323 IVKGCLAALDTAEKSTGSGGKKRGPAQLRVFNLGNTSPVPVSDLVRILERQLKVKAKKNL 382
Query: 172 VDR-RLGDISAMWADTSLAKEELGWSTQLTIEEMCTDFWRW 211
+ R GD+ A+ SLA+ ELG+ ++ F RW
Sbjct: 383 IKMPRNGDVPFTHANISLAQRELGYKPTTDLQTGLKKFVRW 423
>At4g12250.1 68417.m01942 NAD-dependent epimerase/dehydratase family
protein similar to nucleotide sugar epimerase from
Vibrio vulnificus GI:3093975 [PID:g3093975], WbnF
[Escherichia coli] GI:5739472, CAPI protein
{Staphylococcus aureus} SP|P39858; contains Pfam profile
PF01370 NAD dependent epimerase/dehydratase family
Length = 436
Score = 58.4 bits (135), Expect = 4e-09
Identities = 63/234 (26%), Positives = 104/234 (44%), Gaps = 27/234 (11%)
Query: 1 MVFSSSCTVYGEPEHLPITETHPTGSITNVYGRTKYFIEEMLKDLSAADDKWNIISLRYF 60
+V++SS +VYG +P +E T ++Y TK E + + ++ LR+F
Sbjct: 217 IVWASSSSVYGLNSKVPFSEKDRTDQPASLYAATKKAGEGIAHTYNHIYGL-SLTGLRFF 275
Query: 61 NPVGAHPSGLIGEDPTKEFTNLMPFLAQVALGKKPVLTVFGTDYNTPD-GTGIRDYIHVM 119
G P G D F F + GK +TVF +PD G+ RD+ ++
Sbjct: 276 TVYG--PWGR--PDMAYFF-----FTKDILKGK--TITVF----ESPDKGSVARDFTYID 320
Query: 120 DLASGHVAALNLLSQTH---------IRLKVYNLGTGKGVSVKELVNVFERVTKAKVPLK 170
D+ G + AL+ ++ ++YNLG V V +LV + E++ K K K
Sbjct: 321 DIVKGCLGALDTAEKSTGSGGKKKGPAMFRIYNLGNTSPVPVTKLVTILEKLLKMKAKKK 380
Query: 171 YVD-RRLGDISAMWADTSLAKEELGWSTQLTIEEMCTDFWRWQTMNPDGYPKKT 223
+ R GD+ A+ +LA+ ELG+ + +E F +W G KK+
Sbjct: 381 IMPLPRNGDVEFTHANITLAQAELGYKPAVDLETGLKKFVKWYMGFYTGSKKKS 434
>At4g00110.1 68417.m00011 NAD-dependent epimerase/dehydratase family
protein similar to nucleotide sugar epimerase from
Vibrio vulnificus GI:3093975 [PID:g3093975], WbnF
[Escherichia coli] GI:5739472, CAPI protein
{Staphylococcus aureus} SP|P39858; contains Pfam profile
PF01370 NAD dependent epimerase/dehydratase family
Length = 430
Score = 57.2 bits (132), Expect = 9e-09
Identities = 60/222 (27%), Positives = 100/222 (45%), Gaps = 27/222 (12%)
Query: 1 MVFSSSCTVYGEPEHLPITETHPTGSITNVYGRTKYFIEEMLKDLSAADDKWNIISLRYF 60
+V++SS +VYG +P +E T ++Y TK EE+ + ++ LR+F
Sbjct: 212 IVWASSSSVYGLNTKVPFSEKDRTDQPASLYAATKKAGEEIAHTYNHIYG-LSLTGLRFF 270
Query: 61 NPVGAHPSGLIGEDPTKEFTNLMPFLAQVALGKKPVLTVF-GTDYNTPDGTGIRDYIHVM 119
G P G D F F + GK +++F G ++ GT RD+ ++
Sbjct: 271 TVYG--PWG--RPDMAYFF-----FTRDILKGK--AISIFEGVNH----GTVARDFTYID 315
Query: 120 DLASGHVAALNLLSQT---------HIRLKVYNLGTGKGVSVKELVNVFERVTKAKVPLK 170
D+ G + AL+ ++ +L+V+NLG V V +LV + ER+ K K
Sbjct: 316 DIVKGCLGALDTAEKSTGSGGKKRGAAQLRVFNLGNTSPVPVTDLVTILERLLKVKAKRN 375
Query: 171 YVD-RRLGDISAMWADTSLAKEELGWSTQLTIEEMCTDFWRW 211
+ R GD+ A+ S A+ ELG+ ++ F RW
Sbjct: 376 IMKLPRNGDVQFTHANISSAQRELGYKPTTDLQTGLKKFARW 417
>At1g02000.1 68414.m00118 NAD-dependent epimerase/dehydratase family
protein similar to nucleotide sugar epimerase from
Vibrio vulnificus GI:3093975 [PID:g3093975], WbnF
[Escherichia coli] GI:5739472, CAPI protein
{Staphylococcus aureus} SP|P39858; contains Pfam profile
PF01370 NAD dependent epimerase/dehydratase family
Length = 434
Score = 56.0 bits (129), Expect = 2e-08
Identities = 59/222 (26%), Positives = 100/222 (45%), Gaps = 27/222 (12%)
Query: 1 MVFSSSCTVYGEPEHLPITETHPTGSITNVYGRTKYFIEEMLKDLSAADDKWNIISLRYF 60
+V++SS +VYG +P +E T ++Y TK EE+ + ++ LR+F
Sbjct: 213 IVWASSSSVYGLNTKVPFSEKDRTDQPASLYAATKKAGEEIAHTYNHIYG-LSLTGLRFF 271
Query: 61 NPVGAHPSGLIGEDPTKEFTNLMPFLAQVALGKKPVLTVF-GTDYNTPDGTGIRDYIHVM 119
G P G D F F + GK +++F G ++ GT RD+ ++
Sbjct: 272 TVYG--PWG--RPDMAYFF-----FTRDILKGK--AISIFEGANH----GTVARDFTYID 316
Query: 120 DLASGHVAALNLLSQT---------HIRLKVYNLGTGKGVSVKELVNVFERVTKAKVPLK 170
D+ G + AL+ ++ +L+V+NLG V V +LV++ ER+ K K
Sbjct: 317 DIVKGCLGALDTAEKSTGSGGKKRGAAQLRVFNLGNTSPVPVTDLVSILERLLKVKAKRN 376
Query: 171 YVD-RRLGDISAMWADTSLAKEELGWSTQLTIEEMCTDFWRW 211
+ R GD+ A+ S A+ E G+ ++ F RW
Sbjct: 377 MMKLPRNGDVPFTHANISSAQREFGYKPSTDLQTGLKKFVRW 418
>At3g23820.1 68416.m02994 NAD-dependent epimerase/dehydratase family
protein similar to nucleotide sugar epimerase from
Vibrio vulnificus GI:3093975 [PID:g3093975], WbnF
[Escherichia coli] GI:5739472, CAPI protein
{Staphylococcus aureus} SP|P39858; contains Pfam
profile: PF01370 NAD dependent epimerase/dehydratase
family
Length = 460
Score = 54.4 bits (125), Expect = 6e-08
Identities = 65/238 (27%), Positives = 102/238 (42%), Gaps = 29/238 (12%)
Query: 1 MVFSSSCTVYGEPEHLPITETHPTGSITNVYGRTKYFIEEMLKDLSAADDKWNIISLRYF 60
+V++SS +VYG P +E H T ++Y TK EE+ + ++ LR+F
Sbjct: 233 IVWASSSSVYGLNTENPFSEEHRTDQPASLYAATKKAGEEIAHTYNHIYGL-SLTGLRFF 291
Query: 61 NPVGAHPSGLIGEDPTKEFTNLMPFLAQVALGKKPVLTVFGTDYNTPDGTGI-RDYIHVM 119
G P G D F F + GK + Y T D + RD+ ++
Sbjct: 292 TVYG--PWGR--PDMAYFF-----FTKDILHGKSIDI------YRTQDNQEVARDFTYID 336
Query: 120 DLASGHVAALNLLSQT---------HIRLKVYNLGTGKGVSVKELVNVFERV--TKAKVP 168
D+ G V AL+ ++ +L+VYNLG V V LV++ E + TKAK
Sbjct: 337 DIVKGCVGALDTAEKSTGSGGKKRGQAQLRVYNLGNTSPVPVGRLVSILEGLLGTKAKKH 396
Query: 169 LKYVDRRLGDISAMWADTSLAKEELGWSTQLTIEEMCTDFWRWQTMNPDGYPKKTKKT 226
L + R GD+ A+ SLA ++ G+ + F +W P+ K+T
Sbjct: 397 LIKMPRN-GDVPYTHANVSLAYKDFGYKPTTDLAAGLRKFVKWYVGYYGIQPRVKKET 453
>At4g30440.1 68417.m04323 NAD-dependent epimerase/dehydratase family
protein similar to nucleotide sugar epimerase from
Vibrio vulnificus GI:3093975 [PID:g3093975], WbnF
[Escherichia coli] GI:5739472, CAPI protein
{Staphylococcus aureus} SP|P39858; contains Pfam profile
PF01370 NAD dependent epimerase/dehydratase family
Length = 429
Score = 50.8 bits (116), Expect = 8e-07
Identities = 61/234 (26%), Positives = 102/234 (43%), Gaps = 26/234 (11%)
Query: 1 MVFSSSCTVYGEPEHLPITETHPTGSITNVYGRTKYFIEEMLKDLSAADDKWNIISLRYF 60
+V++SS +VYG E +P +E+ T ++Y TK EE+ + I LR+F
Sbjct: 209 IVWASSSSVYGLNEKVPFSESDRTDQPASLYAATKKAGEEITHTYNHIYGL-AITGLRFF 267
Query: 61 NPVGAHPSGLIGEDPTKEFTNLMPFLAQVALGKKPVLTVFGTDYNTPDGTGIRDYIHVMD 120
G P G P + + F + GK P+ G N D RD+ ++ D
Sbjct: 268 TVYG--PWGR----PDMAYFS---FTRNILQGK-PITIYRGK--NRVDLA--RDFTYIDD 313
Query: 121 LASGHVAALNLLSQTH---------IRLKVYNLGTGKGVSVKELVNVFERVTKAKVPLKY 171
+ G + +L+ ++ +++NLG V+V LV++ E+ K K +
Sbjct: 314 IVKGCLGSLDSSGKSTGSGGKKRGAAPYRIFNLGNTSPVTVPILVDILEKHLKVKAKRNF 373
Query: 172 VDRR-LGDISAMWADTSLAKEELGWSTQLTIEEMCTDFWRWQTMNPDGYPKKTK 224
V+ GD+ A+ S A+ E G+ +E F RW ++ GY K K
Sbjct: 374 VEMPGNGDVPFTHANISSARNEFGYKPTTDLETGLKKFVRWY-LSYYGYNTKAK 426
>At1g78570.1 68414.m09157 NAD-dependent epimerase/dehydratase family
protein similar to dTDP-glucose 4,6-dehydratase from
Aneurinibacillus thermoaerophilus GI:16357461, RmlB from
Leptospira borgpetersenii GI:4234803; contains Pfam
profile PF01370 NAD dependent epimerase/dehydratase
family
Length = 669
Score = 47.6 bits (108), Expect = 7e-06
Identities = 61/219 (27%), Positives = 92/219 (42%), Gaps = 31/219 (14%)
Query: 5 SSCTVYGEPEHLPITETHPTGSI--TNVYGRTKYFIEEMLKDLSAADDKWNIISLRYFNP 62
S+ VYGE + + H + TN Y TK E ML +I+ R N
Sbjct: 131 STDEVYGETDEDALVGNHEASQLLPTNPYSATKAGAE-MLVMAYGRSYGLPVITTRGNNV 189
Query: 63 VGAHPSGLIGEDPTKEFTNLMPFLAQVALGKKPVLTVFGTDYNTPDGTGIRDYIHVMDLA 122
G + + P K L+P +A+ + VL + G DG+ +R Y++ D+A
Sbjct: 190 YGPN------QFPEK----LIPKFILLAM-RGQVLPIHG------DGSNVRSYLYCEDVA 232
Query: 123 SGHVAALNLLSQTHIRLKVYNLGTGKGVSV----KELVNVFERVTKAKVPLKYVDRRLGD 178
L+ H VYN+GT K V K++ +F +A + K+VD R +
Sbjct: 233 EAFEVVLHKGEVGH----VYNIGTKKERRVNDVAKDICKLFNMDPEANI--KFVDNRPFN 286
Query: 179 ISAMWADTSLAKEELGWSTQLTIEEMCTDFWRWQTMNPD 217
+ D K+ LGWS + T EE W T NP+
Sbjct: 287 DQRYFLDDQKLKK-LGWSERTTWEEGLKKTMDWYTQNPE 324
>At3g53520.2 68416.m05910 NAD-dependent epimerase/dehydratase family
protein similar to UDP-glucuronic acid decarboxylase
Uxs1p from Filobasidiella neoformans GI:14318327;
contains Pfam profile PF01370 NAD dependent
epimerase/dehydratase family
Length = 426
Score = 46.4 bits (105), Expect = 2e-05
Identities = 60/224 (26%), Positives = 98/224 (43%), Gaps = 30/224 (13%)
Query: 2 VFSSSCTVYGEPEHLPITETHPTGSITNVYGRTKYFIEEMLKDLSAADDKWN----IISL 57
+ +S+ VYG+P P ET+ G++ + R+ Y + + A D +
Sbjct: 220 LLTSTSEVYGDPLEHPQKETY-WGNVNPIGERSCYDEGKRTAETLAMDYHRGAGVEVRIA 278
Query: 58 RYFNPVGAHPSGLIGEDPTKEFTNLMPFLAQVALGKKPVLTVFGTDYNTPDGTGIRDYIH 117
R FN G P + D + +N F+AQ +K +TV+G DG R + +
Sbjct: 279 RIFNTYG--PRMCL--DDGRVVSN---FVAQTI--RKHPMTVYG------DGKQTRSFQY 323
Query: 118 VMDLASGHVAALNLLSQTHIRLKVYNLGTGKGVSVKELVNVFERVTKAKVPLKYVDRRLG 177
V DL G VA L+ H+ +NLG ++ EL V + V +++
Sbjct: 324 VSDLVEGLVA---LMENDHVG--PFNLGNPGEFTMLELAEVVKEVIDPSATIEFKPNTAD 378
Query: 178 DISAMWADTSLAKEELGWSTQLTIEE----MCTDFWRWQTMNPD 217
D D S AKE+L W ++++ E M +DF R + +N D
Sbjct: 379 DPHKRKPDISKAKEQLNWEPKISLREGLPRMVSDF-RNRILNED 421
>At3g62830.1 68416.m07059 NAD-dependent epimerase/dehydratase family
protein similar to UDP-glucuronic acid decarboxylase
Uxs1p from Filobasidiella neoformans GI:14318327;
contains Pfam profile PF01370 NAD dependent
epimerase/dehydratase family; contains non-consensus CA
donor splice site at exon 1 and TA acceptor splice site
at exon 2
Length = 445
Score = 43.2 bits (97), Expect = 2e-04
Identities = 56/207 (27%), Positives = 88/207 (42%), Gaps = 27/207 (13%)
Query: 2 VFSSSCTVYGEPEHLPITETH-----PTGSITNVYGRTKYFIEEMLKDLSAADDKWNIIS 56
+ +S+ VYG+P P ET+ P G + + Y K E + D + +
Sbjct: 228 LLTSTSEVYGDPLQHPQVETYWGNVNPIG-VRSCYDEGKRTAETLTMDYHRGANV-EVRI 285
Query: 57 LRYFNPVGAHPSGLIGEDPTKEFTNLMPFLAQVALGKKPVLTVFGTDYNTPDGTGIRDYI 116
R FN G P I D + +N F+AQ AL K+P LTV+G DG R +
Sbjct: 286 ARIFNTYG--PRMCI--DDGRVVSN---FVAQ-ALRKEP-LTVYG------DGKQTRSFQ 330
Query: 117 HVMDLASGHVAALNLLSQTHIRLKVYNLGTGKGVSVKELVNVFERVTKAKVPLKYVDRRL 176
V DL G + L+ H+ +NLG ++ EL V + +++
Sbjct: 331 FVSDLVEG---LMRLMEGEHVG--PFNLGNPGEFTMLELAKVVQETIDPNANIEFRPNTE 385
Query: 177 GDISAMWADTSLAKEELGWSTQLTIEE 203
D D + AKE LGW ++++ +
Sbjct: 386 DDPHKRKPDITKAKELLGWEPKVSLRQ 412
>At2g47650.1 68415.m05950 NAD-dependent epimerase/dehydratase family
protein similar to UDP-glucuronic acid decarboxylase
Uxs1p from Filobasidiella neoformans GI:14318327;
contains Pfam profile PF01370 NAD dependent
epimerase/dehydratase family; contains non-consensus AT
donor splice site at exon 1 and non-consensus AC
acceptor splice site at exon 2
Length = 443
Score = 43.2 bits (97), Expect = 2e-04
Identities = 56/207 (27%), Positives = 87/207 (42%), Gaps = 27/207 (13%)
Query: 2 VFSSSCTVYGEPEHLPITETH-----PTGSITNVYGRTKYFIEEMLKDLSAADDKWNIIS 56
+ +S+ VYG+P P ET+ P G + + Y K E + D + +
Sbjct: 230 LLTSTSEVYGDPLQHPQVETYWGNVNPIG-VRSCYDEGKRTAETLTMDYHRGANV-EVRI 287
Query: 57 LRYFNPVGAHPSGLIGEDPTKEFTNLMPFLAQVALGKKPVLTVFGTDYNTPDGTGIRDYI 116
R FN G P I D + +N F+AQ AL K+P LTV+G DG R +
Sbjct: 288 ARIFNTYG--PRMCI--DDGRVVSN---FVAQ-ALRKEP-LTVYG------DGKQTRSFQ 332
Query: 117 HVMDLASGHVAALNLLSQTHIRLKVYNLGTGKGVSVKELVNVFERVTKAKVPLKYVDRRL 176
V DL G + L+ H+ +NLG ++ EL V + +++
Sbjct: 333 FVSDLVEG---LMRLMEGEHVG--PFNLGNPGEFTMLELAKVVQETIDPNAKIEFRPNTE 387
Query: 177 GDISAMWADTSLAKEELGWSTQLTIEE 203
D D + AKE LGW ++ + +
Sbjct: 388 DDPHKRKPDITKAKELLGWEPKVALRQ 414
>At3g14790.1 68416.m01869 NAD-dependent epimerase/dehydratase family
protein similar to dTDP-glucose 4,6-dehydratase from
Aneurinibacillus thermoaerophilus GI:16357461,
Saccharopolyspora spinosa GI:15077647, RmlB from
Leptospira borgpetersenii GI:4234803; contains Pfam
profile PF01370 NAD dependent epimerase/dehydratase
family
Length = 664
Score = 42.7 bits (96), Expect = 2e-04
Identities = 56/217 (25%), Positives = 87/217 (40%), Gaps = 27/217 (12%)
Query: 5 SSCTVYGEPEHLPITETHPTGSI--TNVYGRTKYFIEEMLKDLSAADDKWNIISLRYFNP 62
S+ VYGE + H + TN Y TK E ML +I+ R N
Sbjct: 131 STDEVYGETDEDASVGNHEASQLLPTNPYSATKAGAE-MLVMAYGRSYGLPVITTRGNNV 189
Query: 63 VGAHPSGLIGEDPTKEFTNLMPFLAQVALGKKPVLTVFGTDYNTPDGTGIRDYIHVMDLA 122
G + + P K L+P +A+ KP L + G DG+ +R Y++ D+A
Sbjct: 190 YGPN------QFPEK----LIPKFILLAMNGKP-LPIHG------DGSNVRSYLYCEDVA 232
Query: 123 SGHVAALNLLSQTHIRLKVYNLGTGKGVSVKELVNVFERV--TKAKVPLKYVDRRLGDIS 180
L+ H VYN+GT + V ++ N ++ ++YV+ R +
Sbjct: 233 EAFEVVLHKGEVNH----VYNIGTTRERRVIDVANDISKLFGIDPDSTIQYVENRPFNDQ 288
Query: 181 AMWADTSLAKEELGWSTQLTIEEMCTDFWRWQTMNPD 217
+ D K+ LGW + EE W T NP+
Sbjct: 289 RYFLDDQKLKK-LGWCERTNWEEGLRKTMEWYTENPE 324
>At1g17890.3 68414.m02214
GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase,
putative similar to
GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase
(GER1)GI:6016479 from [Arabidopsis thaliana]
Length = 320
Score = 39.9 bits (89), Expect = 0.001
Identities = 27/107 (25%), Positives = 54/107 (50%), Gaps = 5/107 (4%)
Query: 109 GTGIRDYIHVMDLASGHVAALNLLSQTHIRLKVYNLGTGKGVSVKELVNVFERVTKAKVP 168
G+ +R+++HV DLA A + L+ Q + + N+G+G V++KEL + + V K
Sbjct: 213 GSPLREFLHVDDLAD---ACVFLMDQ-YSGFEHVNVGSGVEVTIKELAELVKEVVGFKGK 268
Query: 169 LKYVDRRLGDISAMWADTSLAKEELGWSTQLTIEEMCTDFWRWQTMN 215
L + + D+S LGW+ ++++++ + + W N
Sbjct: 269 LVWDTTKPDGTPRKLMDSS-KLASLGWTPKISLKDGLSQTYEWYLEN 314
>At1g17890.2 68414.m02213
GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase,
putative similar to
GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase
(GER1)GI:6016479 from [Arabidopsis thaliana]
Length = 320
Score = 39.9 bits (89), Expect = 0.001
Identities = 27/107 (25%), Positives = 54/107 (50%), Gaps = 5/107 (4%)
Query: 109 GTGIRDYIHVMDLASGHVAALNLLSQTHIRLKVYNLGTGKGVSVKELVNVFERVTKAKVP 168
G+ +R+++HV DLA A + L+ Q + + N+G+G V++KEL + + V K
Sbjct: 213 GSPLREFLHVDDLAD---ACVFLMDQ-YSGFEHVNVGSGVEVTIKELAELVKEVVGFKGK 268
Query: 169 LKYVDRRLGDISAMWADTSLAKEELGWSTQLTIEEMCTDFWRWQTMN 215
L + + D+S LGW+ ++++++ + + W N
Sbjct: 269 LVWDTTKPDGTPRKLMDSS-KLASLGWTPKISLKDGLSQTYEWYLEN 314
>At1g17890.1 68414.m02215
GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase,
putative similar to
GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase
(GER1)GI:6016479 from [Arabidopsis thaliana]
Length = 328
Score = 39.9 bits (89), Expect = 0.001
Identities = 27/107 (25%), Positives = 54/107 (50%), Gaps = 5/107 (4%)
Query: 109 GTGIRDYIHVMDLASGHVAALNLLSQTHIRLKVYNLGTGKGVSVKELVNVFERVTKAKVP 168
G+ +R+++HV DLA A + L+ Q + + N+G+G V++KEL + + V K
Sbjct: 221 GSPLREFLHVDDLAD---ACVFLMDQ-YSGFEHVNVGSGVEVTIKELAELVKEVVGFKGK 276
Query: 169 LKYVDRRLGDISAMWADTSLAKEELGWSTQLTIEEMCTDFWRWQTMN 215
L + + D+S LGW+ ++++++ + + W N
Sbjct: 277 LVWDTTKPDGTPRKLMDSS-KLASLGWTPKISLKDGLSQTYEWYLEN 322
>At2g28760.2 68415.m03498 NAD-dependent epimerase/dehydratase family
protein similar to UDP-glucuronic acid decarboxylase
Uxs1p from Filobasidiella neoformans GI:14318327;
contains Pfam profile PF01370 NAD dependent
epimerase/dehydratase family
Length = 343
Score = 38.7 bits (86), Expect = 0.003
Identities = 54/208 (25%), Positives = 85/208 (40%), Gaps = 27/208 (12%)
Query: 1 MVFSSSCTVYGEPEHLPITETH-----PTGSITNVYGRTKYFIEEMLKDLSAADDKWNII 55
++ +S+ VYG+P P TE++ P G + + Y K E ++ D I
Sbjct: 140 ILLTSTSEVYGDPLVHPQTESYWGNVNPIG-VRSCYDEGKRVAETLMFDYHRQHGI-EIR 197
Query: 56 SLRYFNPVGAHPSGLIGEDPTKEFTNLMPFLAQVALGKKPVLTVFGTDYNTPDGTGIRDY 115
R FN G + D + +N F+AQ G+ LTV GT R +
Sbjct: 198 IARIFNTYGPR----MNIDDGRVVSN---FIAQALRGE--ALTV------QKPGTQTRSF 242
Query: 116 IHVMDLASGHVAALNLLSQTHIRLKVYNLGTGKGVSVKELVNVFERVTKAKVPLKYVDRR 175
+V D+ G + + QT N+G ++ EL + + K V +K V+
Sbjct: 243 CYVSDMVEGLMRLMEG-DQTG----PINIGNPGEFTMVELAETVKELIKPDVEIKMVENT 297
Query: 176 LGDISAMWADTSLAKEELGWSTQLTIEE 203
D D S AKE LGW ++ + E
Sbjct: 298 PDDPRQRKPDISKAKEVLGWEPKVKLRE 325
>At2g28760.1 68415.m03497 NAD-dependent epimerase/dehydratase family
protein similar to UDP-glucuronic acid decarboxylase
Uxs1p from Filobasidiella neoformans GI:14318327;
contains Pfam profile PF01370 NAD dependent
epimerase/dehydratase family
Length = 343
Score = 38.7 bits (86), Expect = 0.003
Identities = 54/208 (25%), Positives = 85/208 (40%), Gaps = 27/208 (12%)
Query: 1 MVFSSSCTVYGEPEHLPITETH-----PTGSITNVYGRTKYFIEEMLKDLSAADDKWNII 55
++ +S+ VYG+P P TE++ P G + + Y K E ++ D I
Sbjct: 140 ILLTSTSEVYGDPLVHPQTESYWGNVNPIG-VRSCYDEGKRVAETLMFDYHRQHGI-EIR 197
Query: 56 SLRYFNPVGAHPSGLIGEDPTKEFTNLMPFLAQVALGKKPVLTVFGTDYNTPDGTGIRDY 115
R FN G + D + +N F+AQ G+ LTV GT R +
Sbjct: 198 IARIFNTYGPR----MNIDDGRVVSN---FIAQALRGE--ALTV------QKPGTQTRSF 242
Query: 116 IHVMDLASGHVAALNLLSQTHIRLKVYNLGTGKGVSVKELVNVFERVTKAKVPLKYVDRR 175
+V D+ G + + QT N+G ++ EL + + K V +K V+
Sbjct: 243 CYVSDMVEGLMRLMEG-DQTG----PINIGNPGEFTMVELAETVKELIKPDVEIKMVENT 297
Query: 176 LGDISAMWADTSLAKEELGWSTQLTIEE 203
D D S AKE LGW ++ + E
Sbjct: 298 PDDPRQRKPDISKAKEVLGWEPKVKLRE 325
>At1g73250.1 68414.m08477
GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase
(GER1) identical to
GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase
(GER1)GI:6016479 from [Arabidopsis thaliana]
Length = 323
Score = 38.3 bits (85), Expect = 0.004
Identities = 26/107 (24%), Positives = 53/107 (49%), Gaps = 5/107 (4%)
Query: 109 GTGIRDYIHVMDLASGHVAALNLLSQTHIRLKVYNLGTGKGVSVKELVNVFERVTKAKVP 168
G+ +R+++HV DLA V L+ S L+ N+G+G+ V+++EL + + V +
Sbjct: 218 GSPLREFLHVDDLADACVFLLDRYS----GLEHVNIGSGQEVTIRELAELVKEVVGFEGK 273
Query: 169 LKYVDRRLGDISAMWADTSLAKEELGWSTQLTIEEMCTDFWRWQTMN 215
L + + D+S LGW+ ++++ + + + W N
Sbjct: 274 LGWDCTKPDGTPRKLMDSS-KLASLGWTPKVSLRDGLSQTYDWYLKN 319
>At5g28840.1 68418.m03547 NAD-dependent epimerase/dehydratase family
protein similar to sugar epimerase BlmG from
Streptomyces verticillus GI:9937230; contains Pfam
profile PF01370 NAD dependent epimerase/dehydratase
family
Length = 377
Score = 37.5 bits (83), Expect = 0.008
Identities = 30/129 (23%), Positives = 63/129 (48%), Gaps = 12/129 (9%)
Query: 108 DGTGIRDYIHVMDLASGHVAALNLLSQTHIRLKVYNLGTGKGVSVKELVNVFERVTKAKV 167
DG R + + + G + L+++ R V N+G+ + VS+ E+ + + K+
Sbjct: 238 DGLQTRSFTFIDECVEGVLR----LTKSDFREPV-NIGSDEMVSMNEMAEMVLSFEEKKL 292
Query: 168 PLKYVDRRLGDISAMWADTSLAKEELGWSTQLTIEE--MCTDFWRWQTMNPDGYPKKTKK 225
P+ ++ G + +D +L KE+LGW+ + ++E T FW + + + K K
Sbjct: 293 PIHHIPGPEG-VRGRNSDNNLIKEKLGWAPNMRLKEGLRITYFWIKEQIEKE----KAKG 347
Query: 226 TEIVVNGKS 234
+++ + G S
Sbjct: 348 SDVSLYGSS 356
>At1g53500.1 68414.m06066 NAD-dependent epimerase/dehydratase family
protein low similarity to dTDP-D-glucose-4,6-dehydratase
from Aneurinibacillus thermoaerophilus GI:16357461,
Sphingomonas sp. GI:1314581; contains Pfam profile
PF01370: NAD dependent epimerase/dehydratase family;
putative NDP-rhamnose synthase (rhm2 gene) GI:31559258
Length = 667
Score = 36.3 bits (80), Expect = 0.018
Identities = 53/219 (24%), Positives = 90/219 (41%), Gaps = 31/219 (14%)
Query: 5 SSCTVYGEPEHLPITETHPTGSI--TNVYGRTKYFIEEMLKDLSAADDKWNIISLRYFNP 62
S+ VYGE + H + TN Y TK E ML +I+ R N
Sbjct: 133 STDEVYGETDEDAAVGNHEASQLLPTNPYSATKAGAE-MLVMAYGRSYGLPVITTRGNNV 191
Query: 63 VGAHPSGLIGEDPTKEFTNLMPFLAQVALGKKPVLTVFGTDYNTPDGTGIRDYIHVMDLA 122
G + + P K ++P +A+ KP L + G DG+ +R Y++ D+A
Sbjct: 192 YGPN------QFPEK----MIPKFILLAMSGKP-LPIHG------DGSNVRSYLYCEDVA 234
Query: 123 SGHVAALNLLSQTHIRLKVYNLGTGKGVSV----KELVNVFERVTKAKVPLKYVDRRLGD 178
L+ H VYN+GT + V +++ +F + ++ + ++V+ R +
Sbjct: 235 EAFEVVLHKGEIGH----VYNVGTKRERRVIDVARDICKLFGKDPESSI--QFVENRPFN 288
Query: 179 ISAMWADTSLAKEELGWSTQLTIEEMCTDFWRWQTMNPD 217
+ D K+ LGW + E+ W T NP+
Sbjct: 289 DQRYFLDDQKLKK-LGWQERTNWEDGLKKTMDWYTQNPE 326
>At5g59290.1 68418.m07429 UDP-glucuronic acid decarboxylase (UXS3)
identical to UDP-glucuronic acid decarboxylase
[Arabidopsis thaliana] GI:14595666; contains Pfam
profile PF01370 NAD dependent epimerase/dehydratase
family; identical to cDNA UDP-glucuronic acid
decarboxylase (UXS3) GI:14595665
Length = 342
Score = 35.1 bits (77), Expect = 0.041
Identities = 50/208 (24%), Positives = 82/208 (39%), Gaps = 27/208 (12%)
Query: 1 MVFSSSCTVYGEPEHLPITETH-----PTGSITNVYGRTKYFIEEMLKDLSAADDKWNII 55
++ +S+ VYG+P P E++ P G + + Y K E ++ D I
Sbjct: 139 ILLTSTSEVYGDPLIHPQPESYWGNVNPIG-VRSCYDEGKRVAETLMFDYHRQHGI-EIR 196
Query: 56 SLRYFNPVGAHPSGLIGEDPTKEFTNLMPFLAQVALGKKPVLTVFGTDYNTPDGTGIRDY 115
R FN G + D + +N F+AQ G+ LTV GT R +
Sbjct: 197 IARIFNTYGPR----MNIDDGRVVSN---FIAQALRGE--ALTV------QKPGTQTRSF 241
Query: 116 IHVMDLASGHVAALNLLSQTHIRLKVYNLGTGKGVSVKELVNVFERVTKAKVPLKYVDRR 175
+V D+ G + + I N+G ++ EL + + + +K V+
Sbjct: 242 CYVSDMVDGLIRLMEGNDTGPI-----NIGNPGEFTMVELAETVKELINPSIEIKMVENT 296
Query: 176 LGDISAMWADTSLAKEELGWSTQLTIEE 203
D D S AKE LGW ++ + E
Sbjct: 297 PDDPRQRKPDISKAKEVLGWEPKVKLRE 324
>At3g46440.1 68416.m05034 NAD-dependent epimerase/dehydratase family
protein similar to UDP-glucuronic acid decarboxylase
Uxs1p from Filobasidiella neoformans GI:14318327;
contains Pfam profile PF01370 NAD dependent
epimerase/dehydratase family
Length = 341
Score = 32.7 bits (71), Expect = 0.22
Identities = 49/208 (23%), Positives = 82/208 (39%), Gaps = 27/208 (12%)
Query: 1 MVFSSSCTVYGEPEHLPITETH-----PTGSITNVYGRTKYFIEEMLKDLSAADDKWNII 55
++ +S+ VYG+P P E++ P G + + Y K E ++ D I
Sbjct: 138 ILLTSTSEVYGDPLIHPQPESYWGNVNPIG-VRSCYDEGKRVAETLMFDYHRQHGI-EIR 195
Query: 56 SLRYFNPVGAHPSGLIGEDPTKEFTNLMPFLAQVALGKKPVLTVFGTDYNTPDGTGIRDY 115
R FN G + D + +N F+AQ G+ LTV GT R +
Sbjct: 196 IARIFNTYGPR----MNIDDGRVVSN---FIAQALRGE--ALTV------QKPGTQTRSF 240
Query: 116 IHVMDLASGHVAALNLLSQTHIRLKVYNLGTGKGVSVKELVNVFERVTKAKVPLKYVDRR 175
+V D+ G + + I N+G ++ EL + + + +K V+
Sbjct: 241 CYVSDMVDGLMRLMEGDDTGPI-----NIGNPGEFTMVELAETVKELINPSIEIKMVENT 295
Query: 176 LGDISAMWADTSLAKEELGWSTQLTIEE 203
D D + AKE LGW ++ + E
Sbjct: 296 PDDPRQRKPDITKAKEVLGWEPKVKLRE 323
>At1g17455.1 68414.m02138 expressed protein
Length = 114
Score = 30.3 bits (65), Expect = 1.2
Identities = 27/101 (26%), Positives = 45/101 (44%), Gaps = 6/101 (5%)
Query: 96 VLTVFGTDYNTPDGTGI----RDYIHVMDLASGHVAALNLLSQTHIRLKVYNLGTGKGVS 151
VL+ FG +N DG + + ++ V D+ + +N ++Q H + NLG G+
Sbjct: 5 VLSGFGDRHNM-DGKLLQSFQKSFVDVQDILDQNRLLINEINQNHESKQPDNLGRNVGL- 62
Query: 152 VKELVNVFERVTKAKVPLKYVDRRLGDISAMWADTSLAKEE 192
+KEL N RV L + R D S+ + K +
Sbjct: 63 IKELNNNIRRVASLYGDLSHSFARSVDASSEGESSGTLKSD 103
>At3g28530.1 68416.m03563 expressed protein
Length = 25
Score = 29.1 bits (62), Expect = 2.7
Identities = 9/16 (56%), Positives = 10/16 (62%)
Query: 204 MCTDFWRWQTMNPDGY 219
MC D W W + NP GY
Sbjct: 1 MCRDLWNWASNNPYGY 16
>At5g22780.1 68418.m02663 adaptin family protein similar to
SP|P18484 adaptor-related protein complex 2 alpha 2
subunit (Alpha-adaptin C) (Clathrin assembly protein
complex 2 alpha-C large chain) {Rattus norvegicus};
contains Pfam profiles PF01602 Adaptin N terminal
region, PF02883 Adaptin C-terminal domain
Length = 1013
Score = 28.7 bits (61), Expect = 3.6
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 9/86 (10%)
Query: 12 EPEHLPITETHPTGSITNVYGRTKYFIEEMLKDL---SAADDKWNIISLRYFNPVGAH-- 66
+PE + + +HP G+++N+ +T ++L DL A + +S PVGA
Sbjct: 654 DPESVARSLSHPNGTLSNIDPQTP--SPDLLSDLLGPLAIEAPPGAVSYEQHGPVGAEGV 711
Query: 67 PSGLIGED--PTKEFTNLMPFLAQVA 90
P + G P +E TN + + +A
Sbjct: 712 PDEIDGSAIVPVEEQTNTVELIGNIA 737
>At3g51160.1 68416.m05602 GDP-D-mannose-4,6-dehydratase (MUR1)
almost identical to GDP-D-mannose-4,6-dehydratase (MUR1)
GI:1764100 from [Arabidopsis thaliana]
Length = 373
Score = 28.3 bits (60), Expect = 4.7
Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 5/87 (5%)
Query: 122 ASGHVAALNLLSQTHIRLKVYNLGTGKGVSVKELVNV-FERVTKAKVPLKYVDRRL---G 177
A +V A+ L+ Q + Y + T +G +V+E ++V F + +D+R
Sbjct: 258 AGDYVEAMWLMLQQE-KPDDYVVATEEGHTVEEFLDVSFGYLGLNWKDYVEIDQRYFRPA 316
Query: 178 DISAMWADTSLAKEELGWSTQLTIEEM 204
++ + D S AKE LGW Q+ E++
Sbjct: 317 EVDNLQGDASKAKEVLGWKPQVGFEKL 343
>At2g47390.1 68415.m05915 expressed protein
Length = 961
Score = 28.3 bits (60), Expect = 4.7
Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Query: 74 DPTKEFTNLMPFLAQVALGKKPVLTVFGTDYNTPDGTGIRDYIHVMDLASGHVAALNLLS 133
+ T + + PF++ + KKP+L + G + N P GT + GH A L+
Sbjct: 826 EATNVYVEMSPFMSANKI-KKPILLIHGEEDNNP-GTLTMQSDRFFNALKGHGALCRLVV 883
Query: 134 QTH 136
H
Sbjct: 884 LPH 886
>At5g22770.3 68418.m02661 adaptin family protein similar to
SP|P18484 adaptor-related protein complex 2 alpha 2
subunit (Alpha-adaptin C) (Clathrin assembly protein
complex 2 alpha-C large chain) {Rattus norvegicus};
contains Pfam profiles PF01602 Adaptin N terminal
region, PF02883 Adaptin C-terminal domain
Length = 1012
Score = 27.5 bits (58), Expect = 8.3
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 9/86 (10%)
Query: 12 EPEHLPITETHPTGSITNVYGRTKYFIEEMLKDL---SAADDKWNIISLRYFNPVGAH-- 66
+PE + + +HP G+++N+ +T ++L DL A + +S PVGA
Sbjct: 654 DPESVARSLSHPNGTLSNIDPQTP--SPDLLSDLLGPLAIEAPPGAVSNEQHGPVGAEGV 711
Query: 67 PSGLIGED--PTKEFTNLMPFLAQVA 90
P + G P +E TN + + +A
Sbjct: 712 PDEVDGSAIVPVEEQTNTVELIGNIA 737
>At5g22770.2 68418.m02660 adaptin family protein similar to
SP|P18484 adaptor-related protein complex 2 alpha 2
subunit (Alpha-adaptin C) (Clathrin assembly protein
complex 2 alpha-C large chain) {Rattus norvegicus};
contains Pfam profiles PF01602 Adaptin N terminal
region, PF02883 Adaptin C-terminal domain
Length = 1012
Score = 27.5 bits (58), Expect = 8.3
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 9/86 (10%)
Query: 12 EPEHLPITETHPTGSITNVYGRTKYFIEEMLKDL---SAADDKWNIISLRYFNPVGAH-- 66
+PE + + +HP G+++N+ +T ++L DL A + +S PVGA
Sbjct: 654 DPESVARSLSHPNGTLSNIDPQTP--SPDLLSDLLGPLAIEAPPGAVSNEQHGPVGAEGV 711
Query: 67 PSGLIGED--PTKEFTNLMPFLAQVA 90
P + G P +E TN + + +A
Sbjct: 712 PDEVDGSAIVPVEEQTNTVELIGNIA 737
>At5g22770.1 68418.m02659 adaptin family protein similar to
SP|P18484 adaptor-related protein complex 2 alpha 2
subunit (Alpha-adaptin C) (Clathrin assembly protein
complex 2 alpha-C large chain) {Rattus norvegicus};
contains Pfam profiles PF01602 Adaptin N terminal
region, PF02883 Adaptin C-terminal domain
Length = 1012
Score = 27.5 bits (58), Expect = 8.3
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 9/86 (10%)
Query: 12 EPEHLPITETHPTGSITNVYGRTKYFIEEMLKDL---SAADDKWNIISLRYFNPVGAH-- 66
+PE + + +HP G+++N+ +T ++L DL A + +S PVGA
Sbjct: 654 DPESVARSLSHPNGTLSNIDPQTP--SPDLLSDLLGPLAIEAPPGAVSNEQHGPVGAEGV 711
Query: 67 PSGLIGED--PTKEFTNLMPFLAQVA 90
P + G P +E TN + + +A
Sbjct: 712 PDEVDGSAIVPVEEQTNTVELIGNIA 737
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.317 0.134 0.407
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,009,316
Number of Sequences: 28952
Number of extensions: 255488
Number of successful extensions: 694
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 625
Number of HSP's gapped (non-prelim): 48
length of query: 234
length of database: 12,070,560
effective HSP length: 79
effective length of query: 155
effective length of database: 9,783,352
effective search space: 1516419560
effective search space used: 1516419560
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 58 (27.5 bits)
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