BLASTP 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BGIBMGA001864-TA|BGIBMGA001864-PA|IPR007866|Protein of unknown function DUF714 (119 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPBC543.05c |||inorganic anion exchanger |Schizosaccharomyces po... 27 1.0 SPCC5E4.04 |cut1||separase|Schizosaccharomyces pombe|chr 3|||Manual 25 2.4 SPAC22H10.05c |||mRNA cleavage and polyadenylation specificity f... 25 3.2 SPAC26F1.12c |||conserved eukaryotic protein|Schizosaccharomyces... 25 4.2 SPCC622.12c |||NADP-specific glutamate dehydrogenase |Schizosacc... 24 7.4 SPAC1039.03 |||esterase/lipase |Schizosaccharomyces pombe|chr 1|... 24 7.4 SPBC106.17c |cys2||O-acetyltransferase |Schizosaccharomyces pomb... 23 9.7 >SPBC543.05c |||inorganic anion exchanger |Schizosaccharomyces pombe|chr 2|||Manual Length = 517 Score = 26.6 bits (56), Expect = 1.0 Identities = 13/43 (30%), Positives = 20/43 (46%) Query: 62 FAGGMVANGLLGEPILAPLKNTPQLVIGTVTWYLVFYTPFDVG 104 F G++ G + P+L L PQ V+ + W + F F G Sbjct: 379 FIQGLMTVGTMTGPLLLVLHQIPQCVLAGLFWVMGFSAIFGNG 421 >SPCC5E4.04 |cut1||separase|Schizosaccharomyces pombe|chr 3|||Manual Length = 1828 Score = 25.4 bits (53), Expect = 2.4 Identities = 21/67 (31%), Positives = 29/67 (43%), Gaps = 11/67 (16%) Query: 25 AHSLLCALAVREDLGSGAQA---------FSRKHPLSCWLSTMLVIFAGGMVANGLL--G 73 AHS +CA + E +G +A S K P SC+ +T + + G L G Sbjct: 983 AHSNVCAARIYEHMGQAREAEFFYRQACSISEKMPFSCFSATFQLRLCSLLTRAGKLEKG 1042 Query: 74 EPILAPL 80 E IL L Sbjct: 1043 EKILFDL 1049 >SPAC22H10.05c |||mRNA cleavage and polyadenylation specificity factor complex subunit |Schizosaccharomyces pombe|chr 1|||Manual Length = 456 Score = 25.0 bits (52), Expect = 3.2 Identities = 14/51 (27%), Positives = 26/51 (50%), Gaps = 4/51 (7%) Query: 21 YFDIAHSLLCALAVREDLGSGAQ----AFSRKHPLSCWLSTMLVIFAGGMV 67 Y DI HS++ + + G++ + RK+ + WLS + V +GG + Sbjct: 245 YQDILHSIITDFRINIIIVLGSERLYSSMKRKYADATWLSVVKVSSSGGCI 295 >SPAC26F1.12c |||conserved eukaryotic protein|Schizosaccharomyces pombe|chr 1|||Manual Length = 356 Score = 24.6 bits (51), Expect = 4.2 Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%) Query: 1 MDPESFLDLANQVIKLKMYPYFDIAHSLLCALAVRED 37 MD E FL L ++ ++ D++ LLC LA ED Sbjct: 83 MDDE-FLQLIFSIVTNPLHGLADLSCMLLCNLAKEED 118 >SPCC622.12c |||NADP-specific glutamate dehydrogenase |Schizosaccharomyces pombe|chr 3|||Manual Length = 451 Score = 23.8 bits (49), Expect = 7.4 Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 5/45 (11%) Query: 32 LAVREDLGSGAQAF-----SRKHPLSCWLSTMLVIFAGGMVANGL 71 +A ++GS A+A SR CWL+ AGG+ +GL Sbjct: 335 VAEGSNMGSSAEAVEVFEKSRASGEGCWLAPGKAANAGGVAVSGL 379 >SPAC1039.03 |||esterase/lipase |Schizosaccharomyces pombe|chr 1|||Manual Length = 341 Score = 23.8 bits (49), Expect = 7.4 Identities = 9/20 (45%), Positives = 11/20 (55%) Query: 81 KNTPQLVIGTVTWYLVFYTP 100 +NTPQL + WY Y P Sbjct: 230 ENTPQLPAAKMMWYRRHYLP 249 >SPBC106.17c |cys2||O-acetyltransferase |Schizosaccharomyces pombe|chr 2|||Manual Length = 504 Score = 23.4 bits (48), Expect = 9.7 Identities = 9/13 (69%), Positives = 12/13 (92%) Query: 77 LAPLKNTPQLVIG 89 LAPLK+TP +V+G Sbjct: 427 LAPLKDTPVMVMG 439 Database: spombe Posted date: Oct 3, 2007 3:31 PM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.326 0.141 0.435 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 548,191 Number of Sequences: 5004 Number of extensions: 20631 Number of successful extensions: 54 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 4 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 50 Number of HSP's gapped (non-prelim): 7 length of query: 119 length of database: 2,362,478 effective HSP length: 65 effective length of query: 54 effective length of database: 2,037,218 effective search space: 110009772 effective search space used: 110009772 T: 11 A: 40 X1: 15 ( 7.0 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 40 (21.6 bits) S2: 48 (23.4 bits)
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