GeneModel BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001864-TA|BGIBMGA001864-PA|IPR007866|Protein of unknown
function DUF714
         (119 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC001195-1|AAH01195.1|  299|Homo sapiens transmembrane protein 3...    86   2e-17
AK025981-1|BAB15307.1|  299|Homo sapiens protein ( Homo sapiens ...    86   2e-17
BC000049-1|AAH00049.1|  291|Homo sapiens transmembrane protein 3...    82   4e-16
AL627247-1|CAI12389.1|  291|Homo sapiens transmembrane protein 3...    82   4e-16
AL592488-1|CAH71457.1|  291|Homo sapiens transmembrane protein 3...    82   4e-16
AL592437-2|CAI39689.1|  291|Homo sapiens transmembrane protein 3...    82   4e-16
AK001355-1|BAA91645.1|  291|Homo sapiens protein ( Homo sapiens ...    82   4e-16
CR457258-1|CAG33539.1|  291|Homo sapiens FLJ10493 protein.             80   2e-15
AL627247-2|CAI12390.1|  237|Homo sapiens transmembrane protein 3...    45   5e-05
AL592488-2|CAH71458.1|  237|Homo sapiens transmembrane protein 3...    45   5e-05
AL592437-4|CAI39691.1|  237|Homo sapiens transmembrane protein 3...    45   5e-05
AL627247-4|CAI12392.1|  161|Homo sapiens transmembrane protein 3...    38   0.011
AL592437-5|CAI39692.1|  161|Homo sapiens transmembrane protein 3...    38   0.011

>BC001195-1|AAH01195.1|  299|Homo sapiens transmembrane protein 38A
           protein.
          Length = 299

 Score = 86.2 bits (204), Expect = 2e-17
 Identities = 38/112 (33%), Positives = 68/112 (60%), Gaps = 2/112 (1%)

Query: 8   DLANQVIKLKMYPYFDIAHSLLCALAVREDLGSGAQAFSRKHPLSCWLSTMLVIFAGGMV 67
           +LA    ++ ++P FD+++ ++  L ++ +   GA   SR+HP++ WL  ML  F   ++
Sbjct: 11  ELALSFSRVPLFPVFDLSYFIVSILYLKYE--PGAVELSRRHPIASWLCAMLHCFGSYIL 68

Query: 68  ANGLLGEPILAPLKNTPQLVIGTVTWYLVFYTPFDVGYKVAKFLPVKVVAAA 119
           A+ LLGEP++    N   +++ +  WYL+F+ P D+ YK   FLPVK++  A
Sbjct: 69  ADLLLGEPLIDYFSNNSSILLASAVWYLIFFCPLDLFYKCVCFLPVKLIFVA 120


>AK025981-1|BAB15307.1|  299|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ22328 fis, clone HRC05632. ).
          Length = 299

 Score = 86.2 bits (204), Expect = 2e-17
 Identities = 38/112 (33%), Positives = 68/112 (60%), Gaps = 2/112 (1%)

Query: 8   DLANQVIKLKMYPYFDIAHSLLCALAVREDLGSGAQAFSRKHPLSCWLSTMLVIFAGGMV 67
           +LA    ++ ++P FD+++ ++  L ++ +   GA   SR+HP++ WL  ML  F   ++
Sbjct: 11  ELALSFSRVPLFPVFDLSYFIVSILYLKYE--PGAVELSRRHPIASWLCAMLHCFGSYIL 68

Query: 68  ANGLLGEPILAPLKNTPQLVIGTVTWYLVFYTPFDVGYKVAKFLPVKVVAAA 119
           A+ LLGEP++    N   +++ +  WYL+F+ P D+ YK   FLPVK++  A
Sbjct: 69  ADLLLGEPLIDYFSNNSSILLASAVWYLIFFCPLDLFYKCVCFLPVKLIFVA 120


>BC000049-1|AAH00049.1|  291|Homo sapiens transmembrane protein 38B
           protein.
          Length = 291

 Score = 82.2 bits (194), Expect = 4e-16
 Identities = 40/111 (36%), Positives = 68/111 (61%), Gaps = 2/111 (1%)

Query: 8   DLANQVIKLKMYPYFDIAHSLLCALAVREDLGSGAQAFSRKHPLSCWLSTMLVIFAGGMV 67
           +LA    +  M+P+FDIAH L+  +AV+   G+ A A+  K+P+S W + ML  F GG++
Sbjct: 7   ELALAFSRTSMFPFFDIAHYLVSVMAVKRQPGAAALAW--KNPISSWFTAMLHCFGGGIL 64

Query: 68  ANGLLGEPILAPLKNTPQLVIGTVTWYLVFYTPFDVGYKVAKFLPVKVVAA 118
           +  LL EP L  L N   +++ +  WY+ F+ P D+  +   +LPV+++A+
Sbjct: 65  SCLLLAEPPLKFLANHTNILLASSIWYITFFCPHDLVSQGYSYLPVQLLAS 115


>AL627247-1|CAI12389.1|  291|Homo sapiens transmembrane protein 38B
           protein.
          Length = 291

 Score = 82.2 bits (194), Expect = 4e-16
 Identities = 40/111 (36%), Positives = 68/111 (61%), Gaps = 2/111 (1%)

Query: 8   DLANQVIKLKMYPYFDIAHSLLCALAVREDLGSGAQAFSRKHPLSCWLSTMLVIFAGGMV 67
           +LA    +  M+P+FDIAH L+  +AV+   G+ A A+  K+P+S W + ML  F GG++
Sbjct: 7   ELALAFSRTSMFPFFDIAHYLVSVMAVKRQPGAAALAW--KNPISSWFTAMLHCFGGGIL 64

Query: 68  ANGLLGEPILAPLKNTPQLVIGTVTWYLVFYTPFDVGYKVAKFLPVKVVAA 118
           +  LL EP L  L N   +++ +  WY+ F+ P D+  +   +LPV+++A+
Sbjct: 65  SCLLLAEPPLKFLANHTNILLASSIWYITFFCPHDLVSQGYSYLPVQLLAS 115


>AL592488-1|CAH71457.1|  291|Homo sapiens transmembrane protein 38B
           protein.
          Length = 291

 Score = 82.2 bits (194), Expect = 4e-16
 Identities = 40/111 (36%), Positives = 68/111 (61%), Gaps = 2/111 (1%)

Query: 8   DLANQVIKLKMYPYFDIAHSLLCALAVREDLGSGAQAFSRKHPLSCWLSTMLVIFAGGMV 67
           +LA    +  M+P+FDIAH L+  +AV+   G+ A A+  K+P+S W + ML  F GG++
Sbjct: 7   ELALAFSRTSMFPFFDIAHYLVSVMAVKRQPGAAALAW--KNPISSWFTAMLHCFGGGIL 64

Query: 68  ANGLLGEPILAPLKNTPQLVIGTVTWYLVFYTPFDVGYKVAKFLPVKVVAA 118
           +  LL EP L  L N   +++ +  WY+ F+ P D+  +   +LPV+++A+
Sbjct: 65  SCLLLAEPPLKFLANHTNILLASSIWYITFFCPHDLVSQGYSYLPVQLLAS 115


>AL592437-2|CAI39689.1|  291|Homo sapiens transmembrane protein 38B
           protein.
          Length = 291

 Score = 82.2 bits (194), Expect = 4e-16
 Identities = 40/111 (36%), Positives = 68/111 (61%), Gaps = 2/111 (1%)

Query: 8   DLANQVIKLKMYPYFDIAHSLLCALAVREDLGSGAQAFSRKHPLSCWLSTMLVIFAGGMV 67
           +LA    +  M+P+FDIAH L+  +AV+   G+ A A+  K+P+S W + ML  F GG++
Sbjct: 7   ELALAFSRTSMFPFFDIAHYLVSVMAVKRQPGAAALAW--KNPISSWFTAMLHCFGGGIL 64

Query: 68  ANGLLGEPILAPLKNTPQLVIGTVTWYLVFYTPFDVGYKVAKFLPVKVVAA 118
           +  LL EP L  L N   +++ +  WY+ F+ P D+  +   +LPV+++A+
Sbjct: 65  SCLLLAEPPLKFLANHTNILLASSIWYITFFCPHDLVSQGYSYLPVQLLAS 115


>AK001355-1|BAA91645.1|  291|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10493 fis, clone NT2RP2000274. ).
          Length = 291

 Score = 82.2 bits (194), Expect = 4e-16
 Identities = 40/111 (36%), Positives = 68/111 (61%), Gaps = 2/111 (1%)

Query: 8   DLANQVIKLKMYPYFDIAHSLLCALAVREDLGSGAQAFSRKHPLSCWLSTMLVIFAGGMV 67
           +LA    +  M+P+FDIAH L+  +AV+   G+ A A+  K+P+S W + ML  F GG++
Sbjct: 7   ELALAFSRTSMFPFFDIAHYLVSVMAVKRQPGAAALAW--KNPISSWFTAMLHCFGGGIL 64

Query: 68  ANGLLGEPILAPLKNTPQLVIGTVTWYLVFYTPFDVGYKVAKFLPVKVVAA 118
           +  LL EP L  L N   +++ +  WY+ F+ P D+  +   +LPV+++A+
Sbjct: 65  SCLLLAEPPLKFLANHTNILLASSIWYITFFCPHDLVSQGYSYLPVQLLAS 115


>CR457258-1|CAG33539.1|  291|Homo sapiens FLJ10493 protein.
          Length = 291

 Score = 80.2 bits (189), Expect = 2e-15
 Identities = 39/111 (35%), Positives = 67/111 (60%), Gaps = 2/111 (1%)

Query: 8   DLANQVIKLKMYPYFDIAHSLLCALAVREDLGSGAQAFSRKHPLSCWLSTMLVIFAGGMV 67
           +LA    +  M+P+FDIAH L+  + V+   G+ A A+  K+P+S W + ML  F GG++
Sbjct: 7   ELALAFSRTSMFPFFDIAHYLVSVMEVKRQPGAAALAW--KNPISSWFTAMLHCFGGGIL 64

Query: 68  ANGLLGEPILAPLKNTPQLVIGTVTWYLVFYTPFDVGYKVAKFLPVKVVAA 118
           +  LL EP L  L N   +++ +  WY+ F+ P D+  +   +LPV+++A+
Sbjct: 65  SCLLLAEPPLKFLANHTNILLASSIWYITFFCPHDLVSQGYSYLPVQLLAS 115


>AL627247-2|CAI12390.1|  237|Homo sapiens transmembrane protein 38B
           protein.
          Length = 237

 Score = 45.2 bits (102), Expect = 5e-05
 Identities = 21/61 (34%), Positives = 37/61 (60%)

Query: 58  MLVIFAGGMVANGLLGEPILAPLKNTPQLVIGTVTWYLVFYTPFDVGYKVAKFLPVKVVA 117
           ML  F GG+++  LL EP L  L N   +++ +  WY+ F+ P D+  +   +LPV+++A
Sbjct: 1   MLHCFGGGILSCLLLAEPPLKFLANHTNILLASSIWYITFFCPHDLVSQGYSYLPVQLLA 60

Query: 118 A 118
           +
Sbjct: 61  S 61


>AL592488-2|CAH71458.1|  237|Homo sapiens transmembrane protein 38B
           protein.
          Length = 237

 Score = 45.2 bits (102), Expect = 5e-05
 Identities = 21/61 (34%), Positives = 37/61 (60%)

Query: 58  MLVIFAGGMVANGLLGEPILAPLKNTPQLVIGTVTWYLVFYTPFDVGYKVAKFLPVKVVA 117
           ML  F GG+++  LL EP L  L N   +++ +  WY+ F+ P D+  +   +LPV+++A
Sbjct: 1   MLHCFGGGILSCLLLAEPPLKFLANHTNILLASSIWYITFFCPHDLVSQGYSYLPVQLLA 60

Query: 118 A 118
           +
Sbjct: 61  S 61


>AL592437-4|CAI39691.1|  237|Homo sapiens transmembrane protein 38B
           protein.
          Length = 237

 Score = 45.2 bits (102), Expect = 5e-05
 Identities = 21/61 (34%), Positives = 37/61 (60%)

Query: 58  MLVIFAGGMVANGLLGEPILAPLKNTPQLVIGTVTWYLVFYTPFDVGYKVAKFLPVKVVA 117
           ML  F GG+++  LL EP L  L N   +++ +  WY+ F+ P D+  +   +LPV+++A
Sbjct: 1   MLHCFGGGILSCLLLAEPPLKFLANHTNILLASSIWYITFFCPHDLVSQGYSYLPVQLLA 60

Query: 118 A 118
           +
Sbjct: 61  S 61


>AL627247-4|CAI12392.1|  161|Homo sapiens transmembrane protein 38B
           protein.
          Length = 161

 Score = 37.5 bits (83), Expect = 0.011
 Identities = 16/48 (33%), Positives = 29/48 (60%)

Query: 71  LLGEPILAPLKNTPQLVIGTVTWYLVFYTPFDVGYKVAKFLPVKVVAA 118
           LL EP L  L N   +++ +  WY+ F+ P D+  +   +LPV+++A+
Sbjct: 4   LLAEPPLKFLANHTNILLASSIWYITFFCPHDLVSQGYSYLPVQLLAS 51


>AL592437-5|CAI39692.1|  161|Homo sapiens transmembrane protein 38B
           protein.
          Length = 161

 Score = 37.5 bits (83), Expect = 0.011
 Identities = 16/48 (33%), Positives = 29/48 (60%)

Query: 71  LLGEPILAPLKNTPQLVIGTVTWYLVFYTPFDVGYKVAKFLPVKVVAA 118
           LL EP L  L N   +++ +  WY+ F+ P D+  +   +LPV+++A+
Sbjct: 4   LLAEPPLKFLANHTNILLASSIWYITFFCPHDLVSQGYSYLPVQLLAS 51


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.326    0.141    0.435 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,633,538
Number of Sequences: 224733
Number of extensions: 716412
Number of successful extensions: 1180
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1159
Number of HSP's gapped (non-prelim): 13
length of query: 119
length of database: 73,234,838
effective HSP length: 81
effective length of query: 38
effective length of database: 55,031,465
effective search space: 2091195670
effective search space used: 2091195670
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 59 (27.9 bits)