Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001863-TA|BGIBMGA001863-PA|undefined
(427 letters)
Database: tribolium
317 sequences; 114,650 total letters
Searching....................................................done
Score E
Sequences producing significant alignments: (bits) Value
X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein. 33 0.004
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr... 29 0.083
U09586-1|AAC47270.1| 425|Tribolium castaneum ORF 1 protein. 28 0.15
EF222294-1|ABN79654.1| 451|Tribolium castaneum ecdysis triggeri... 26 0.44
AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein ... 25 1.4
AM295015-1|CAL25730.1| 549|Tribolium castaneum ecdysone recepto... 23 4.1
DQ659248-1|ABG47446.1| 496|Tribolium castaneum chitinase 8 prot... 23 5.5
AF506022-1|AAM46898.1| 685|Tribolium castaneum polyubiquitin pr... 22 7.2
AY008296-1|AAG22858.1| 556|Tribolium castaneum Dorsal protein. 22 9.5
>X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein.
Length = 524
Score = 33.1 bits (72), Expect = 0.004
Identities = 24/89 (26%), Positives = 45/89 (50%), Gaps = 5/89 (5%)
Query: 217 SKLNSKNNSDVPKTVTPKGKEQTKPDDDKRQAEKKPEKDLKENEKFNTESDKPENSVNDS 276
S + K D+ T+TP KPDD++ ++ E L+++ F++++ E+SV++
Sbjct: 116 SPKSEKEEKDMETTLTPCASPNRKPDDNQDHL-RRLEMSLEKSGLFSSKTS--EHSVDEL 172
Query: 277 PRSMDNEFKQ--EPTKTVAKEKEPTKIPT 303
DN+ ++ E + V K KI T
Sbjct: 173 SGKSDNDAEEYDEQSLRVPKVNSHGKIKT 201
>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
protein protein.
Length = 1156
Score = 28.7 bits (61), Expect = 0.083
Identities = 53/249 (21%), Positives = 97/249 (38%), Gaps = 22/249 (8%)
Query: 81 DSNPAAATSVESTMERLIEKMMVDLNAESDEDSGYTLTNATSPSA--------ES-DRDT 131
+SN ++ SV + +E+LIEK + ++ G+ T A S+ ES D
Sbjct: 719 ESNNGSSPSVLNAIEKLIEKSFDSRSRQNSSFPGHGPTTAPMGSSILKRLGIDESVDYTK 778
Query: 132 ICCNETTQN--KSDGDGQNSEEIKFTPSENKSST-PEKANEAQDVKAADDKKQMSAEKTN 188
+ T N +S Q+ + S ++SS+ E+ + + + K + N
Sbjct: 779 PLVDAQTMNLLRSYHQQQSHHYGRRERSGSESSSISERCSSRVESLTPERKMEPPGVPLN 838
Query: 189 NTSQANTKSTQQTVVKDKNNEKT-NVTAESKLNSKNNSDVPKTVTPKGKEQTKPDDDKRQ 247
+T ++ +++ DK E V + +++ + + +V K +E D+D+R
Sbjct: 839 STPRSTPDKREKSPTSDKAQEADGEVVVKKEVDEEERLENHTSVKIK-REAEDRDEDERS 897
Query: 248 AEKKPEKDLKENEKFNTESDKPENSVNDSPRSMDNEFKQEPTKTVAKEKEPTKIPTKNQT 307
K+ E+E DKP S SPR P + A + T T
Sbjct: 898 FHSNGAKE--EDE------DKPSVSPLTSPRQPAETHAGSPCRNSASPASSDRSGTPRST 949
Query: 308 KIDDQTNSS 316
D + S
Sbjct: 950 NGDRKPGGS 958
>U09586-1|AAC47270.1| 425|Tribolium castaneum ORF 1 protein.
Length = 425
Score = 27.9 bits (59), Expect = 0.15
Identities = 13/71 (18%), Positives = 31/71 (43%)
Query: 156 PSENKSSTPEKANEAQDVKAADDKKQMSAEKTNNTSQANTKSTQQTVVKDKNNEKTNVTA 215
P+ + P+++++ Q + + NN + +N + ++NN +
Sbjct: 347 PANRGNGFPKRSSDEQQWRNNQPSTSNNRWHNNNGNNSNNHWRKNNPNDNRNNTSSRAQG 406
Query: 216 ESKLNSKNNSD 226
E+ NSKN+ +
Sbjct: 407 ETSRNSKNSGN 417
>EF222294-1|ABN79654.1| 451|Tribolium castaneum ecdysis triggering
hormone receptorisoform B protein.
Length = 451
Score = 26.2 bits (55), Expect = 0.44
Identities = 8/37 (21%), Positives = 24/37 (64%)
Query: 174 KAADDKKQMSAEKTNNTSQANTKSTQQTVVKDKNNEK 210
K DK++++ + T++++ +++ T + + +N+EK
Sbjct: 375 KRRKDKREITRKSTSSSTHTSSQQTSDSFLSKRNSEK 411
>AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein
protein.
Length = 370
Score = 24.6 bits (51), Expect = 1.4
Identities = 13/38 (34%), Positives = 20/38 (52%)
Query: 53 SLSYNNNPGNASSNDEVLVVKRSKHAREDSNPAAATSV 90
S NNN +S+N E+ KR E+ +P+ +SV
Sbjct: 85 SRKLNNNNVVSSTNQEIRGPKRKTWKVEEDSPSPTSSV 122
>AM295015-1|CAL25730.1| 549|Tribolium castaneum ecdysone receptor
(isoform A) protein.
Length = 549
Score = 23.0 bits (47), Expect = 4.1
Identities = 8/21 (38%), Positives = 13/21 (61%)
Query: 257 KENEKFNTESDKPENSVNDSP 277
++ +K E DKP ++ N SP
Sbjct: 268 RKEKKAQKEKDKPNSTTNGSP 288
>DQ659248-1|ABG47446.1| 496|Tribolium castaneum chitinase 8
protein.
Length = 496
Score = 22.6 bits (46), Expect = 5.5
Identities = 10/38 (26%), Positives = 17/38 (44%)
Query: 136 ETTQNKSDGDGQNSEEIKFTPSENKSSTPEKANEAQDV 173
+TT+++ + E T + TPE NE+ V
Sbjct: 405 QTTESEPTQASEQPTESSTTQKPQTTKTPESGNESDGV 442
>AF506022-1|AAM46898.1| 685|Tribolium castaneum polyubiquitin
protein.
Length = 685
Score = 22.2 bits (45), Expect = 7.2
Identities = 22/90 (24%), Positives = 34/90 (37%), Gaps = 2/90 (2%)
Query: 225 SDVPKTVTPK--GKEQTKPDDDKRQAEKKPEKDLKENEKFNTESDKPENSVNDSPRSMDN 282
SD + V K KE PD + K +D + +N + + + V M
Sbjct: 400 SDTIENVKAKIQDKEGIPPDQQRSIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQI 459
Query: 283 EFKQEPTKTVAKEKEPTKIPTKNQTKIDDQ 312
K KT+ E EP+ + KI D+
Sbjct: 460 FVKTLTGKTITLEVEPSDTIENVKAKIQDK 489
Score = 21.8 bits (44), Expect = 9.5
Identities = 22/90 (24%), Positives = 34/90 (37%), Gaps = 2/90 (2%)
Query: 225 SDVPKTVTPK--GKEQTKPDDDKRQAEKKPEKDLKENEKFNTESDKPENSVNDSPRSMDN 282
SD + V K KE PD + K +D + +N + + + V M
Sbjct: 20 SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQI 79
Query: 283 EFKQEPTKTVAKEKEPTKIPTKNQTKIDDQ 312
K KT+ E EP+ + KI D+
Sbjct: 80 FVKTLTGKTITLEVEPSDTIENVKAKIQDK 109
Score = 21.8 bits (44), Expect = 9.5
Identities = 22/90 (24%), Positives = 34/90 (37%), Gaps = 2/90 (2%)
Query: 225 SDVPKTVTPK--GKEQTKPDDDKRQAEKKPEKDLKENEKFNTESDKPENSVNDSPRSMDN 282
SD + V K KE PD + K +D + +N + + + V M
Sbjct: 96 SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQI 155
Query: 283 EFKQEPTKTVAKEKEPTKIPTKNQTKIDDQ 312
K KT+ E EP+ + KI D+
Sbjct: 156 FVKTLTGKTITLEVEPSDTIENVKAKIQDK 185
Score = 21.8 bits (44), Expect = 9.5
Identities = 22/90 (24%), Positives = 34/90 (37%), Gaps = 2/90 (2%)
Query: 225 SDVPKTVTPK--GKEQTKPDDDKRQAEKKPEKDLKENEKFNTESDKPENSVNDSPRSMDN 282
SD + V K KE PD + K +D + +N + + + V M
Sbjct: 172 SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQI 231
Query: 283 EFKQEPTKTVAKEKEPTKIPTKNQTKIDDQ 312
K KT+ E EP+ + KI D+
Sbjct: 232 FVKTLTGKTITLEVEPSDTIENVKAKIQDK 261
Score = 21.8 bits (44), Expect = 9.5
Identities = 22/90 (24%), Positives = 34/90 (37%), Gaps = 2/90 (2%)
Query: 225 SDVPKTVTPK--GKEQTKPDDDKRQAEKKPEKDLKENEKFNTESDKPENSVNDSPRSMDN 282
SD + V K KE PD + K +D + +N + + + V M
Sbjct: 248 SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQI 307
Query: 283 EFKQEPTKTVAKEKEPTKIPTKNQTKIDDQ 312
K KT+ E EP+ + KI D+
Sbjct: 308 FVKTLTGKTITLEVEPSDTIENVKAKIQDK 337
Score = 21.8 bits (44), Expect = 9.5
Identities = 22/90 (24%), Positives = 34/90 (37%), Gaps = 2/90 (2%)
Query: 225 SDVPKTVTPK--GKEQTKPDDDKRQAEKKPEKDLKENEKFNTESDKPENSVNDSPRSMDN 282
SD + V K KE PD + K +D + +N + + + V M
Sbjct: 324 SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQI 383
Query: 283 EFKQEPTKTVAKEKEPTKIPTKNQTKIDDQ 312
K KT+ E EP+ + KI D+
Sbjct: 384 FVKTLTGKTITLEVEPSDTIENVKAKIQDK 413
Score = 21.8 bits (44), Expect = 9.5
Identities = 22/90 (24%), Positives = 34/90 (37%), Gaps = 2/90 (2%)
Query: 225 SDVPKTVTPK--GKEQTKPDDDKRQAEKKPEKDLKENEKFNTESDKPENSVNDSPRSMDN 282
SD + V K KE PD + K +D + +N + + + V M
Sbjct: 476 SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQI 535
Query: 283 EFKQEPTKTVAKEKEPTKIPTKNQTKIDDQ 312
K KT+ E EP+ + KI D+
Sbjct: 536 FVKTLTGKTITLEVEPSDTIENVKAKIQDK 565
Score = 21.8 bits (44), Expect = 9.5
Identities = 22/90 (24%), Positives = 34/90 (37%), Gaps = 2/90 (2%)
Query: 225 SDVPKTVTPK--GKEQTKPDDDKRQAEKKPEKDLKENEKFNTESDKPENSVNDSPRSMDN 282
SD + V K KE PD + K +D + +N + + + V M
Sbjct: 552 SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQI 611
Query: 283 EFKQEPTKTVAKEKEPTKIPTKNQTKIDDQ 312
K KT+ E EP+ + KI D+
Sbjct: 612 FVKTLTGKTITLEVEPSDTIENVKAKIQDK 641
>AY008296-1|AAG22858.1| 556|Tribolium castaneum Dorsal protein.
Length = 556
Score = 21.8 bits (44), Expect = 9.5
Identities = 14/60 (23%), Positives = 28/60 (46%)
Query: 102 MVDLNAESDEDSGYTLTNATSPSAESDRDTICCNETTQNKSDGDGQNSEEIKFTPSENKS 161
M++ N S G L +PSA++D + +ET S ++++++ P + S
Sbjct: 438 MMNWNMPSTSVVGDMLNMNWNPSAQNDLSGVNLSETPSGISSLLNLDNQQLELKPIDLNS 497
Database: tribolium
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 114,650
Number of sequences in database: 317
Lambda K H
0.300 0.116 0.306
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,851
Number of Sequences: 317
Number of extensions: 4160
Number of successful extensions: 25
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 7
Number of HSP's gapped (non-prelim): 16
length of query: 427
length of database: 114,650
effective HSP length: 59
effective length of query: 368
effective length of database: 95,947
effective search space: 35308496
effective search space used: 35308496
T: 11
A: 40
X1: 17 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (21.7 bits)
S2: 44 (21.8 bits)
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