GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001861-TA|BGIBMGA001861-PA|undefined
         (99 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    22   1.0  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   2.4  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   2.4  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   3.2  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    20   4.2  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    20   4.2  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    20   5.5  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    19   7.3  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    19   9.7  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    19   9.7  

>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 22.2 bits (45), Expect = 1.0
 Identities = 9/29 (31%), Positives = 14/29 (48%)

Query: 58  TASNAYNPPPYLVFNSKTGSYYPYYKFPI 86
           T+   + PPP  V+      Y+PY  F +
Sbjct: 156 TSLPLHYPPPPPVYTHHYARYHPYPNFGV 184


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.0 bits (42), Expect = 2.4
 Identities = 9/39 (23%), Positives = 23/39 (58%)

Query: 26  TSDEKTDLKIPQGVFEHIKNKRDTSRRNWSRNTASNAYN 64
           T+ EK++L   + + +++    D ++ ++S+NT +   N
Sbjct: 318 TNLEKSNLNHNEQLRKYLCKNEDETKNHYSKNTYNEQGN 356


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.0 bits (42), Expect = 2.4
 Identities = 9/39 (23%), Positives = 23/39 (58%)

Query: 26  TSDEKTDLKIPQGVFEHIKNKRDTSRRNWSRNTASNAYN 64
           T+ EK++L   + + +++    D ++ ++S+NT +   N
Sbjct: 210 TNLEKSNLNHNEQLRKYLCKNEDETKNHYSKNTYNEQGN 248


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 20.6 bits (41), Expect = 3.2
 Identities = 9/30 (30%), Positives = 16/30 (53%)

Query: 52  RNWSRNTASNAYNPPPYLVFNSKTGSYYPY 81
           R ++ + ++  YNP  Y+   +  GS  PY
Sbjct: 271 RTFTLSNSNTNYNPGTYINKEAGGGSPGPY 300


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis
          triggering hormone receptorisoform B protein.
          Length = 451

 Score = 20.2 bits (40), Expect = 4.2
 Identities = 9/34 (26%), Positives = 16/34 (47%)

Query: 49 TSRRNWSRNTASNAYNPPPYLVFNSKTGSYYPYY 82
          TS   ++ ++  + YN      FN  + S +P Y
Sbjct: 33 TSNYLYTPSSTIDLYNTSSVSNFNESSSSVFPNY 66


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis
          triggering hormone receptorisoform A protein.
          Length = 434

 Score = 20.2 bits (40), Expect = 4.2
 Identities = 9/34 (26%), Positives = 16/34 (47%)

Query: 49 TSRRNWSRNTASNAYNPPPYLVFNSKTGSYYPYY 82
          TS   ++ ++  + YN      FN  + S +P Y
Sbjct: 33 TSNYLYTPSSTIDLYNTSSVSNFNESSSSVFPNY 66


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 19.8 bits (39), Expect = 5.5
 Identities = 7/16 (43%), Positives = 10/16 (62%)

Query: 65  PPPYLVFNSKTGSYYP 80
           P P + FNS  G++ P
Sbjct: 180 PEPPVTFNSLNGAHTP 195


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 19.4 bits (38), Expect = 7.3
 Identities = 10/21 (47%), Positives = 14/21 (66%), Gaps = 2/21 (9%)

Query: 7   LLNLVTLTSAARRKQ--NDLI 25
           +LN+ T+   AR+KQ  N LI
Sbjct: 359 ILNISTIIITARKKQQWNSLI 379


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 19.0 bits (37), Expect = 9.7
 Identities = 8/11 (72%), Positives = 8/11 (72%)

Query: 27  SDEKTDLKIPQ 37
           SD K D KIPQ
Sbjct: 215 SDNKQDDKIPQ 225


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 19.0 bits (37), Expect = 9.7
 Identities = 8/11 (72%), Positives = 8/11 (72%)

Query: 27  SDEKTDLKIPQ 37
           SD K D KIPQ
Sbjct: 215 SDNKQDDKIPQ 225


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.318    0.134    0.398 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,488
Number of Sequences: 317
Number of extensions: 1167
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of query: 99
length of database: 114,650
effective HSP length: 48
effective length of query: 51
effective length of database: 99,434
effective search space:  5071134
effective search space used:  5071134
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)
S2: 37 (19.0 bits)