Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001861-TA|BGIBMGA001861-PA|undefined
(99 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC57A7.05 |||conserved protein |Schizosaccharomyces pombe|chr ... 27 0.53
SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3 ... 26 1.2
SPBC1347.13c |||ribose methyltransferase|Schizosaccharomyces pom... 25 1.6
SPAC9G1.10c |||inositol polyphosphate phosphatase |Schizosacchar... 25 2.1
SPBC1A4.03c |top2|ptr11|DNA topoisomerase II|Schizosaccharomyces... 25 2.8
SPAC19D5.06c |din1||Dhp1p-interacting protein Din1|Schizosacchar... 25 2.8
SPAC6B12.16 |meu26||conserved fungal protein|Schizosaccharomyces... 24 3.7
SPAC890.06 |||nucleoporin Nup157/170|Schizosaccharomyces pombe|c... 24 3.7
SPCC1235.06 |sif1||Sad1 interacting factor 1|Schizosaccharomyces... 24 4.9
SPBC32H8.13c |mok12||alpha-1,3-glucan synthase Mok12|Schizosacch... 24 4.9
SPCC1620.05 |||Rab geranylgeranyltransferase |Schizosaccharomyce... 23 6.5
SPBC337.03 |||conserved eukaryotic protein|Schizosaccharomyces p... 23 6.5
SPBC12C2.10c |pst1|SPBC21D10.01c|Clr6 histone deacetylase comple... 23 6.5
SPAC3G9.02 |oar2||3-oxoacyl-[acyl-carrier-protein] reductase Oar... 23 6.5
SPAC22G7.08 |ppk8||serine/threonine protein kinase Ppk8 |Schizos... 23 8.6
>SPAC57A7.05 |||conserved protein |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1337
Score = 27.1 bits (57), Expect = 0.53
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 33 LKIPQGVFEHIKNKRDTSRRNWSRNTASNAYNPPP 67
LKI +G F I+ ++S S ++ SNA+N P
Sbjct: 52 LKIQKGSFPAIRQPTESSTHFQSSHSVSNAHNQSP 86
>SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 932
Score = 25.8 bits (54), Expect = 1.2
Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Query: 18 RRKQNDLITSDEKTDL-KIPQGVFEHIKNKRDTSRRNWSRNTASNAY 63
R +Q IT D++ +L K+ E ++NK + S NT N Y
Sbjct: 570 RLRQKSQITPDDEVELAKVYLNALETLENKPSLAPDQASYNTRINVY 616
>SPBC1347.13c |||ribose methyltransferase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 301
Score = 25.4 bits (53), Expect = 1.6
Identities = 12/41 (29%), Positives = 22/41 (53%)
Query: 31 TDLKIPQGVFEHIKNKRDTSRRNWSRNTASNAYNPPPYLVF 71
+DL P G + KN +D+ + + +S++ N PP V+
Sbjct: 111 SDLLFPAGEEYNNKNGQDSPHNDLNEGKSSSSDNYPPLYVY 151
>SPAC9G1.10c |||inositol polyphosphate phosphatase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1191
Score = 25.0 bits (52), Expect = 2.1
Identities = 12/29 (41%), Positives = 16/29 (55%)
Query: 60 SNAYNPPPYLVFNSKTGSYYPYYKFPIEN 88
+N PPP F+SK GS P P++N
Sbjct: 171 NNHQIPPPKPNFSSKAGSSSPISVSPLKN 199
>SPBC1A4.03c |top2|ptr11|DNA topoisomerase II|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1485
Score = 24.6 bits (51), Expect = 2.8
Identities = 11/46 (23%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 6 ILLNLVTLTSAARRKQNDL-ITSDEKTDLKIPQGVFEHIKNKRDTS 50
+ LN ++ + +K ++ + SD K D + P+ ++EH+ ++ D +
Sbjct: 301 VYLNNERISISGFKKYVEMYLASDTKPDEEPPRVIYEHVNDRWDVA 346
>SPAC19D5.06c |din1||Dhp1p-interacting protein
Din1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 352
Score = 24.6 bits (51), Expect = 2.8
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 6/40 (15%)
Query: 59 ASNAYNPPPYLVFNSKTGSYYPYYKFPIENNYIRRNMYKY 98
ASNA NP + V KT K+P+EN +R+ + KY
Sbjct: 227 ASNAENPNLHYV-ELKTSK-----KYPLENYGMRKKLLKY 260
>SPAC6B12.16 |meu26||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 344
Score = 24.2 bits (50), Expect = 3.7
Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Query: 32 DLKIPQGVFEHIKNKRDTSRRNWSRNTASNAYNPPPYLVFNSK 74
DL+ H N+R T N AS N PY+V N+K
Sbjct: 117 DLQTFSSNLNHSNNRRQTICNFNMANDASKE-NETPYMVLNNK 158
>SPAC890.06 |||nucleoporin Nup157/170|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1315
Score = 24.2 bits (50), Expect = 3.7
Identities = 15/59 (25%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
Query: 30 KTDLKIP-QGVFEHIKNKRDTSRRNWSRNTASNAYNPPPYLVFNSKTGSYYPYYKFPIE 87
++ + +P +G + IK +++ RN S PPP + TG Y ++ PI+
Sbjct: 466 ESSMYVPIKGFVQDIKCIQNSRERN---ELVSQFNTPPPTFAILTNTGVYVVVHRRPID 521
>SPCC1235.06 |sif1||Sad1 interacting factor 1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 257
Score = 23.8 bits (49), Expect = 4.9
Identities = 9/18 (50%), Positives = 10/18 (55%)
Query: 65 PPPYLVFNSKTGSYYPYY 82
PPPY T SY PY+
Sbjct: 214 PPPYGAMIRHTTSYVPYF 231
>SPBC32H8.13c |mok12||alpha-1,3-glucan synthase
Mok12|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2352
Score = 23.8 bits (49), Expect = 4.9
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 64 NPPPYLVFNSKTGSYYPYYKFPIENNYI 91
NP + +++ G PY KF +N+YI
Sbjct: 620 NPTTWGLWSMIRGPLAPYQKFSDQNDYI 647
>SPCC1620.05 |||Rab geranylgeranyltransferase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 344
Score = 23.4 bits (48), Expect = 6.5
Identities = 14/56 (25%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Query: 20 KQNDLITSDEKTDLKIPQGV---FEHIKNKRDTSRRNWSRNTASNAYNPPPYLVFN 72
+Q L E+ ++ +G+ F+ + ++D S N T +NP Y V+N
Sbjct: 12 EQRKLKAEKERAKIEEYRGLVSRFQEARKRKDYSEGNLKLTTELLDWNPETYSVWN 67
>SPBC337.03 |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 387
Score = 23.4 bits (48), Expect = 6.5
Identities = 11/41 (26%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Query: 10 LVTLTSAARRKQNDLITSDEKTDLKIPQGVFEHIKNKRDTS 50
L+T + +Q L+ S+E+ LK + + +++NK T+
Sbjct: 218 LITSLESLIEEQKKLL-SEEEESLKSVESIISNLENKESTT 257
>SPBC12C2.10c |pst1|SPBC21D10.01c|Clr6 histone deacetylase complex
subunit Pst1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1522
Score = 23.4 bits (48), Expect = 6.5
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 60 SNAYNPPPYLVFNSKTGSYYP 80
+N PPP+ +FNS + Y P
Sbjct: 54 TNPQGPPPFPLFNSISPVYDP 74
>SPAC3G9.02 |oar2||3-oxoacyl-[acyl-carrier-protein] reductase Oar2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 236
Score = 23.4 bits (48), Expect = 6.5
Identities = 9/30 (30%), Positives = 20/30 (66%)
Query: 15 SAARRKQNDLITSDEKTDLKIPQGVFEHIK 44
S A+ +Q+ L +D ++D+K + +FE ++
Sbjct: 46 SVAKGQQHTLTIADVQSDMKNLKSIFESVE 75
>SPAC22G7.08 |ppk8||serine/threonine protein kinase Ppk8
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 513
Score = 23.0 bits (47), Expect = 8.6
Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Query: 52 RNWSRNTASNAYNPPPYLVFNSKTGSYYP--YYKFPIENNYI 91
R + +N +S+ + PP F K+ S+Y Y K I N +
Sbjct: 131 RLYRKNPSSDPNDIPPQFHFKKKSKSFYSSMYDKMKIRINIL 172
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.398
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 531,816
Number of Sequences: 5004
Number of extensions: 22316
Number of successful extensions: 87
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 76
Number of HSP's gapped (non-prelim): 17
length of query: 99
length of database: 2,362,478
effective HSP length: 63
effective length of query: 36
effective length of database: 2,047,226
effective search space: 73700136
effective search space used: 73700136
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 47 (23.0 bits)
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