GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001861-TA|BGIBMGA001861-PA|undefined
         (99 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    24   0.89 
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    24   0.89 
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    23   1.6  
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    22   3.6  
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    21   6.3  
AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.       21   8.3  
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    21   8.3  

>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 24.2 bits (50), Expect = 0.89
 Identities = 12/49 (24%), Positives = 24/49 (48%), Gaps = 2/49 (4%)

Query: 20  KQNDLITSDEKTDLKIPQGVFEHIKNKRDTSRRNWSRNTASNAYNPPPY 68
           ++++L     K D+K  +G+ +   +      R W+R+ A+    P PY
Sbjct: 86  QRDELAAKMGKHDMK--RGISQRSSDAGGEPSRRWTRSGATGRRQPHPY 132


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 24.2 bits (50), Expect = 0.89
 Identities = 12/49 (24%), Positives = 24/49 (48%), Gaps = 2/49 (4%)

Query: 20  KQNDLITSDEKTDLKIPQGVFEHIKNKRDTSRRNWSRNTASNAYNPPPY 68
           ++++L     K D+K  +G+ +   +      R W+R+ A+    P PY
Sbjct: 86  QRDELAAKMGKHDMK--RGISQRSSDAGGEPSRRWTRSGATGRRQPHPY 132


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-signaling
            promoter protein.
          Length = 1197

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 2/39 (5%)

Query: 33   LKIPQGVFEHIK-NKRDTSRRNWSRNTASNAYNPPPYLV 70
            + +P  V  H K ++R T+R    R T S+   P P+LV
Sbjct: 1141 MNVPAAVTHHTKEDERMTARPKLGR-TPSDTGGPTPHLV 1178


>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 8/26 (30%), Positives = 15/26 (57%)

Query: 32  DLKIPQGVFEHIKNKRDTSRRNWSRN 57
           +LK  +   +  K K + SR+NW ++
Sbjct: 788 ELKSAEEDLKRSKKKSEESRKNWKKH 813


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 10/25 (40%), Positives = 13/25 (52%)

Query: 42   HIKNKRDTSRRNWSRNTASNAYNPP 66
            HI +  D   +  SRN A+ AY  P
Sbjct: 1076 HISDAIDAIYKQLSRNEAAQAYLGP 1100


>AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.
          Length = 1009

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 8/26 (30%), Positives = 14/26 (53%)

Query: 9   NLVTLTSAARRKQNDLITSDEKTDLK 34
           N++T+   +   Q DL+    +TD K
Sbjct: 734 NVITIAETSALDQEDLLLLRNETDYK 759


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 8/12 (66%), Positives = 9/12 (75%)

Query: 57  NTASNAYNPPPY 68
           NTA NAY+P  Y
Sbjct: 163 NTAFNAYDPERY 174


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.318    0.134    0.398 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,818
Number of Sequences: 2123
Number of extensions: 4559
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 2
Number of HSP's gapped (non-prelim): 7
length of query: 99
length of database: 516,269
effective HSP length: 55
effective length of query: 44
effective length of database: 399,504
effective search space: 17578176
effective search space used: 17578176
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 42 (21.0 bits)