Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001861-TA|BGIBMGA001861-PA|undefined
(99 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ277892-2|CAD12456.1|30017|Homo sapiens Titin protein. 28 4.0
AJ277892-1|CAD12455.1|26926|Homo sapiens N2B-Titin Isoform protein. 28 4.0
X90568-1|CAA62188.1|26926|Homo sapiens titin protein. 27 7.0
DQ535440-1|ABF83383.1| 124|Homo sapiens circulating B cell anti... 27 9.3
BC117170-1|AAI17171.1| 1714|Homo sapiens collagen, type XXIV, al... 27 9.3
BC116180-1|AAI16181.1| 846|Homo sapiens COL24A1 protein protein. 27 9.3
BC113654-1|AAI13655.1| 1714|Homo sapiens collagen, type XXIV, al... 27 9.3
BC037169-1|AAH37169.1| 758|Homo sapiens procollagen-lysine, 2-o... 27 9.3
AY244357-1|AAP80185.1| 1714|Homo sapiens alpha 1 type XXIV colla... 27 9.3
AL445427-1|CAI19120.1| 1714|Homo sapiens collagen, type XXIV, al... 27 9.3
AL359971-1|CAI16233.1| 1714|Homo sapiens collagen, type XXIV, al... 27 9.3
AL356059-1|CAH71121.1| 1714|Homo sapiens collagen, type XXIV, al... 27 9.3
>AJ277892-2|CAD12456.1|30017|Homo sapiens Titin protein.
Length = 30000
Score = 28.3 bits (60), Expect = 4.0
Identities = 14/52 (26%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Query: 39 VFEHIKNKRDTSRRNWSRNTASNAYNPPPYLVFNSKTGSYYPYYKFPIENNY 90
+ ++ KRD R++WS T + + + V N + G Y +++ EN Y
Sbjct: 20745 IINYVVQKRDAERKSWS--TVTTECSKTSFRVANLEEGKSY-FFRVFAENEY 20793
>AJ277892-1|CAD12455.1|26926|Homo sapiens N2B-Titin Isoform protein.
Length = 26926
Score = 28.3 bits (60), Expect = 4.0
Identities = 14/52 (26%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Query: 39 VFEHIKNKRDTSRRNWSRNTASNAYNPPPYLVFNSKTGSYYPYYKFPIENNY 90
+ ++ KRD R++WS T + + + V N + G Y +++ EN Y
Sbjct: 13321 IINYVVQKRDAERKSWS--TVTTECSKTSFRVANLEEGKSY-FFRVFAENEY 13369
>X90568-1|CAA62188.1|26926|Homo sapiens titin protein.
Length = 26926
Score = 27.5 bits (58), Expect = 7.0
Identities = 14/52 (26%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Query: 39 VFEHIKNKRDTSRRNWSRNTASNAYNPPPYLVFNSKTGSYYPYYKFPIENNY 90
+ ++ KRD R++WS T + + + V N + G Y +++ EN Y
Sbjct: 13321 IINYVVQKRDAERKSWS--TVTTECSKTSFRVPNLEEGKSY-FFRVFAENEY 13369
>DQ535440-1|ABF83383.1| 124|Homo sapiens circulating B cell
antibody heavy chain variable region protein.
Length = 124
Score = 27.1 bits (57), Expect = 9.3
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
Query: 41 EHIKNKRDTSRRNWSRNTA---SNAYNPPPYLVFNSKTGSYYPYYKFPIE 87
+ +K + SR N S+NT N+ V+ GSYYPYY + ++
Sbjct: 64 DSVKGRFTISRDN-SKNTLYLQMNSLRAEDTAVYYCARGSYYPYYYYGMD 112
>BC117170-1|AAI17171.1| 1714|Homo sapiens collagen, type XXIV, alpha
1 protein.
Length = 1714
Score = 27.1 bits (57), Expect = 9.3
Identities = 11/25 (44%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
Query: 74 KTGSYYPYYKFPIENNYIRRNMYKY 98
K G +YP +PIEN+Y +Y Y
Sbjct: 449 KEGEFYPDATYPIENSY-ETELYDY 472
>BC116180-1|AAI16181.1| 846|Homo sapiens COL24A1 protein protein.
Length = 846
Score = 27.1 bits (57), Expect = 9.3
Identities = 11/25 (44%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
Query: 74 KTGSYYPYYKFPIENNYIRRNMYKY 98
K G +YP +PIEN+Y +Y Y
Sbjct: 449 KEGEFYPDATYPIENSY-ETELYDY 472
>BC113654-1|AAI13655.1| 1714|Homo sapiens collagen, type XXIV, alpha
1 protein.
Length = 1714
Score = 27.1 bits (57), Expect = 9.3
Identities = 11/25 (44%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
Query: 74 KTGSYYPYYKFPIENNYIRRNMYKY 98
K G +YP +PIEN+Y +Y Y
Sbjct: 449 KEGEFYPDATYPIENSY-ETELYDY 472
>BC037169-1|AAH37169.1| 758|Homo sapiens procollagen-lysine,
2-oxoglutarate 5-dioxygenase 2 protein.
Length = 758
Score = 27.1 bits (57), Expect = 9.3
Identities = 14/55 (25%), Positives = 28/55 (50%)
Query: 19 RKQNDLITSDEKTDLKIPQGVFEHIKNKRDTSRRNWSRNTASNAYNPPPYLVFNS 73
+++ D T + L P+GVF +I N+ + R + N ++ YN + +F +
Sbjct: 503 QREKDSPTPETFQMLSPPKGVFMYISNRHEFGRLLSTANYNTSHYNNDLWQIFEN 557
>AY244357-1|AAP80185.1| 1714|Homo sapiens alpha 1 type XXIV collagen
precursor protein.
Length = 1714
Score = 27.1 bits (57), Expect = 9.3
Identities = 11/25 (44%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
Query: 74 KTGSYYPYYKFPIENNYIRRNMYKY 98
K G +YP +PIEN+Y +Y Y
Sbjct: 449 KEGEFYPDATYPIENSY-ETELYDY 472
>AL445427-1|CAI19120.1| 1714|Homo sapiens collagen, type XXIV, alpha
1 protein.
Length = 1714
Score = 27.1 bits (57), Expect = 9.3
Identities = 11/25 (44%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
Query: 74 KTGSYYPYYKFPIENNYIRRNMYKY 98
K G +YP +PIEN+Y +Y Y
Sbjct: 449 KEGEFYPDATYPIENSY-ETELYDY 472
>AL359971-1|CAI16233.1| 1714|Homo sapiens collagen, type XXIV, alpha
1 protein.
Length = 1714
Score = 27.1 bits (57), Expect = 9.3
Identities = 11/25 (44%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
Query: 74 KTGSYYPYYKFPIENNYIRRNMYKY 98
K G +YP +PIEN+Y +Y Y
Sbjct: 449 KEGEFYPDATYPIENSY-ETELYDY 472
>AL356059-1|CAH71121.1| 1714|Homo sapiens collagen, type XXIV, alpha
1 protein.
Length = 1714
Score = 27.1 bits (57), Expect = 9.3
Identities = 11/25 (44%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
Query: 74 KTGSYYPYYKFPIENNYIRRNMYKY 98
K G +YP +PIEN+Y +Y Y
Sbjct: 449 KEGEFYPDATYPIENSY-ETELYDY 472
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.318 0.134 0.398
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,706,878
Number of Sequences: 224733
Number of extensions: 619683
Number of successful extensions: 1146
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 1122
Number of HSP's gapped (non-prelim): 38
length of query: 99
length of database: 73,234,838
effective HSP length: 76
effective length of query: 23
effective length of database: 56,155,130
effective search space: 1291567990
effective search space used: 1291567990
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 57 (27.1 bits)
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