GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001861-TA|BGIBMGA001861-PA|undefined
         (99 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-2590|AAF53453.1|  292|Drosophila melanogaster CG15263-P...    29   0.97 
BT024419-1|ABC86481.1|  536|Drosophila melanogaster IP02928p pro...    28   2.2  
AE014297-1241|AAF54589.1|  519|Drosophila melanogaster CG6658-PA...    28   2.2  
AY113234-1|AAM29239.1|  407|Drosophila melanogaster AT11423p pro...    27   5.2  
AY060687-1|AAL28235.1|  260|Drosophila melanogaster GH12638p pro...    27   5.2  
AE014296-1642|AAF50280.1|  260|Drosophila melanogaster CG3672-PA...    27   5.2  
AE014296-1237|AAF50576.1|  407|Drosophila melanogaster CG14834-P...    27   5.2  

>AE014134-2590|AAF53453.1|  292|Drosophila melanogaster CG15263-PA
           protein.
          Length = 292

 Score = 29.1 bits (62), Expect = 0.97
 Identities = 23/75 (30%), Positives = 31/75 (41%), Gaps = 1/75 (1%)

Query: 8   LNLVTLTSAARRKQNDLITSDEKTDLKIPQGVFEHIKNKRDTSRRNWSRNTASNA-YNPP 66
           L+ VT T   R    ++IT  EK    IP G +      RDT R  +   T + A +   
Sbjct: 185 LDSVTSTQVNRHLIGEIITPHEKLTNLIPFGYYNENYRDRDTCREAFELVTVNQAPHQYT 244

Query: 67  PYLVFNSKTGSYYPY 81
            Y   N+K    Y Y
Sbjct: 245 KYGHANTKFTEAYLY 259


>BT024419-1|ABC86481.1|  536|Drosophila melanogaster IP02928p
           protein.
          Length = 536

 Score = 27.9 bits (59), Expect = 2.2
 Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 1/50 (2%)

Query: 4   FGILLNLVTLTSAARRKQNDLITSDEKTDLKIPQGVFEHIKNKRDTSRRN 53
           +GI+L+  TL +   RK  + ITS E +  K+ QG+    ++++ T   N
Sbjct: 413 YGIMLDFKTLNAVEFRKAIERITS-EPSYTKVVQGISFRYRDQQQTPIEN 461


>AE014297-1241|AAF54589.1|  519|Drosophila melanogaster CG6658-PA
           protein.
          Length = 519

 Score = 27.9 bits (59), Expect = 2.2
 Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 1/50 (2%)

Query: 4   FGILLNLVTLTSAARRKQNDLITSDEKTDLKIPQGVFEHIKNKRDTSRRN 53
           +GI+L+  TL +   RK  + ITS E +  K+ QG+    ++++ T   N
Sbjct: 396 YGIMLDFKTLNAVEFRKAIERITS-EPSYTKVVQGISFRYRDQQQTPIEN 444


>AY113234-1|AAM29239.1|  407|Drosophila melanogaster AT11423p
           protein.
          Length = 407

 Score = 26.6 bits (56), Expect = 5.2
 Identities = 12/44 (27%), Positives = 18/44 (40%)

Query: 24  LITSDEKTDLKIPQGVFEHIKNKRDTSRRNWSRNTASNAYNPPP 67
           L+       L+ P    E I++KR      W  + AS+   P P
Sbjct: 162 LVIQRTANGLETPSKASEQIRHKRSVDHLEWFNDFASSLVRPSP 205


>AY060687-1|AAL28235.1|  260|Drosophila melanogaster GH12638p
           protein.
          Length = 260

 Score = 26.6 bits (56), Expect = 5.2
 Identities = 12/56 (21%), Positives = 21/56 (37%)

Query: 25  ITSDEKTDLKIPQGVFEHIKNKRDTSRRNWSRNTASNAYNPPPYLVFNSKTGSYYP 80
           +  +    LK+P      +    +   + W    A+  +NP PY     + G Y P
Sbjct: 146 VEDNRPAHLKLPATKTPAVLKAEEEHFKLWGELAAAAGHNPDPYAAEYQQEGRYQP 201


>AE014296-1642|AAF50280.1|  260|Drosophila melanogaster CG3672-PA
           protein.
          Length = 260

 Score = 26.6 bits (56), Expect = 5.2
 Identities = 12/56 (21%), Positives = 21/56 (37%)

Query: 25  ITSDEKTDLKIPQGVFEHIKNKRDTSRRNWSRNTASNAYNPPPYLVFNSKTGSYYP 80
           +  +    LK+P      +    +   + W    A+  +NP PY     + G Y P
Sbjct: 146 VEDNRPAHLKLPATKTPAVLKAEEEHFKLWGELAAAAGHNPDPYAAEYQQEGRYQP 201


>AE014296-1237|AAF50576.1|  407|Drosophila melanogaster CG14834-PA
           protein.
          Length = 407

 Score = 26.6 bits (56), Expect = 5.2
 Identities = 12/44 (27%), Positives = 18/44 (40%)

Query: 24  LITSDEKTDLKIPQGVFEHIKNKRDTSRRNWSRNTASNAYNPPP 67
           L+       L+ P    E I++KR      W  + AS+   P P
Sbjct: 162 LVIQRTANGLETPSKASEQIRHKRSVDHLEWFNDFASSLVRPSP 205


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.318    0.134    0.398 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,320,184
Number of Sequences: 52641
Number of extensions: 209201
Number of successful extensions: 614
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 609
Number of HSP's gapped (non-prelim): 7
length of query: 99
length of database: 24,830,863
effective HSP length: 73
effective length of query: 26
effective length of database: 20,988,070
effective search space: 545689820
effective search space used: 545689820
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 54 (25.8 bits)