Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001861-TA|BGIBMGA001861-PA|undefined
(99 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81030-17|CAB02706.2| 72|Caenorhabditis elegans Hypothetical p... 31 0.14
Z92806-5|CAB07255.2| 1251|Caenorhabditis elegans Hypothetical pr... 28 0.96
Z81030-14|CAJ43441.1| 75|Caenorhabditis elegans Hypothetical p... 28 0.96
Z81030-3|CAB02707.1| 138|Caenorhabditis elegans Hypothetical pr... 28 1.3
Z70682-6|CAA94586.1| 345|Caenorhabditis elegans Hypothetical pr... 27 1.7
Z81091-2|CAB03143.2| 2972|Caenorhabditis elegans Hypothetical pr... 27 2.2
AF067607-1|AAY86220.1| 342|Caenorhabditis elegans Hypothetical ... 27 2.9
U64857-15|AAC25858.1| 470|Caenorhabditis elegans Hypothetical p... 26 3.9
AL021448-1|CAA16276.2| 898|Caenorhabditis elegans Hypothetical ... 26 3.9
AF233290-1|AAF62516.1| 898|Caenorhabditis elegans maternal-effe... 26 3.9
Z81030-4|CAB02708.1| 89|Caenorhabditis elegans Hypothetical pr... 26 5.1
AF047661-4|AAC04435.2| 931|Caenorhabditis elegans Hypothetical ... 26 5.1
AF047661-2|AAK71389.1| 886|Caenorhabditis elegans Hypothetical ... 26 5.1
AF047661-1|AAK71388.2| 915|Caenorhabditis elegans Hypothetical ... 26 5.1
U41110-4|AAA82419.1| 575|Caenorhabditis elegans Hypothetical pr... 25 6.8
AL008866-1|CAA15509.3| 724|Caenorhabditis elegans Hypothetical ... 25 6.8
Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical p... 25 9.0
AL110484-28|CAB54395.2| 419|Caenorhabditis elegans Hypothetical... 25 9.0
AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical ... 25 9.0
AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha... 25 9.0
AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosenso... 25 9.0
AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosenso... 25 9.0
AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensor... 25 9.0
AF067945-7|ABQ13059.1| 954|Caenorhabditis elegans Mechanosensor... 25 9.0
AF067945-6|AAV28326.1| 1167|Caenorhabditis elegans Mechanosensor... 25 9.0
AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensor... 25 9.0
AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensor... 25 9.0
AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensor... 25 9.0
AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensor... 25 9.0
>Z81030-17|CAB02706.2| 72|Caenorhabditis elegans Hypothetical
protein C01G10.4 protein.
Length = 72
Score = 31.1 bits (67), Expect = 0.14
Identities = 13/28 (46%), Positives = 15/28 (53%)
Query: 69 LVFNSKTGSYYPYYKFPIENNYIRRNMY 96
LV S +YY YY +P NNY N Y
Sbjct: 11 LVLLSTANAYYTYYYYPNNNNYNNNNGY 38
>Z92806-5|CAB07255.2| 1251|Caenorhabditis elegans Hypothetical
protein K10G4.5 protein.
Length = 1251
Score = 28.3 bits (60), Expect = 0.96
Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 12/80 (15%)
Query: 16 AARRKQNDLITSDEKTDLKIPQGVFEHIKNKRDTSRRNW-----SRNTASNAYNPPPYLV 70
A + K D +T + DLK H+K+ DT ++W + ++N Y+ PPY +
Sbjct: 418 AIQMKSLDYLTIEVLDDLK-------HMKHNYDTMYKHWYDMYWDADESANEYHYPPYKL 470
Query: 71 FNSKTGSYYPYYKFPIENNY 90
F+ + +P N +
Sbjct: 471 FHIPIYYLNNFETYPFPNPF 490
>Z81030-14|CAJ43441.1| 75|Caenorhabditis elegans Hypothetical
protein C01G10.17 protein.
Length = 75
Score = 28.3 bits (60), Expect = 0.96
Identities = 13/28 (46%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Query: 69 LVFNSKTGSYYPYYKFPIENNYIRRNMY 96
LV + T +YY YY +P NNY N Y
Sbjct: 11 LVLFAATDAYYTYYYYP-NNNYNNNNGY 37
>Z81030-3|CAB02707.1| 138|Caenorhabditis elegans Hypothetical
protein C01G10.5 protein.
Length = 138
Score = 27.9 bits (59), Expect = 1.3
Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 4/31 (12%)
Query: 69 LVFNSKTGSYYPYYKFPIENNYIRRNMYKYS 99
LV S T +YY YY +P NN N Y Y+
Sbjct: 11 LVLLSTTSAYYTYYYYPNNNN----NGYNYN 37
>Z70682-6|CAA94586.1| 345|Caenorhabditis elegans Hypothetical
protein F08G5.6 protein.
Length = 345
Score = 27.5 bits (58), Expect = 1.7
Identities = 14/54 (25%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Query: 32 DLKIPQGVFEHIKNKRDTSRRNWSRNTASNAYNPPPYLVFNSKTGSYYPYYKFP 85
++K+P V+ + + + N + T +N N ++ NS++G Y +Y FP
Sbjct: 54 NIKVPAMVYARVVLENGLNGNN-DQITVTNEQNAKTFI--NSRSGKYATFYVFP 104
>Z81091-2|CAB03143.2| 2972|Caenorhabditis elegans Hypothetical protein
F55H12.3 protein.
Length = 2972
Score = 27.1 bits (57), Expect = 2.2
Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 3/63 (4%)
Query: 2 IIFGILLNLVTLTSAARRKQNDLITSDEKTDLKIPQGV-FEHIKNKRDTSRRNWSRNTAS 60
++FG+LL ++ + RKQ +I KTD Q V H N + + T++
Sbjct: 2803 VVFGVLLLIIIVVLVCFRKQ--IIAWFRKTDTSDNQHVALSHWDNATNRNEEENQNPTST 2860
Query: 61 NAY 63
N Y
Sbjct: 2861 NTY 2863
>AF067607-1|AAY86220.1| 342|Caenorhabditis elegans Hypothetical
protein C18H7.10 protein.
Length = 342
Score = 26.6 bits (56), Expect = 2.9
Identities = 11/42 (26%), Positives = 22/42 (52%)
Query: 24 LITSDEKTDLKIPQGVFEHIKNKRDTSRRNWSRNTASNAYNP 65
++ ++EK D++ + EH +N+ + R TAS +P
Sbjct: 293 IVVNEEKQDVEQHDTIQEHKENQEEAENRKKEEATASTKCSP 334
>U64857-15|AAC25858.1| 470|Caenorhabditis elegans Hypothetical
protein C37C3.1 protein.
Length = 470
Score = 26.2 bits (55), Expect = 3.9
Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 6/52 (11%)
Query: 15 SAARRKQNDLITSDEKTDLKIPQGVFEHIKNKRDTSRRNWSRNTASNAYNPP 66
S ARR+ L S +T + H + TSRR R++ S + +PP
Sbjct: 310 SPARRRSRHLSRSGSRTPAQ------RHSRRSESTSRRRSGRHSRSRSRSPP 355
>AL021448-1|CAA16276.2| 898|Caenorhabditis elegans Hypothetical
protein Y2H9A.1 protein.
Length = 898
Score = 26.2 bits (55), Expect = 3.9
Identities = 21/93 (22%), Positives = 41/93 (44%), Gaps = 4/93 (4%)
Query: 9 NLVTLTSAARRKQNDLITSDEKTDLKIPQGVFEHIKNKRDTSRRNWSRNTAS--NAYNPP 66
N + A+R++ ++ S EK K + +KN+ S+ TAS + +P
Sbjct: 681 NCMGTMGKAKREKPEVADSSEKAAKKNKSSKKKSVKNQNRKSQEAGKNGTASKKSEISPS 740
Query: 67 PYLVFNSKTGSYYPYYKFPIENNYIRRNMYKYS 99
++ + S+ +PI N ++N+ K S
Sbjct: 741 KPSTSSASSTSFVQQASWPISQN--KKNLKKNS 771
>AF233290-1|AAF62516.1| 898|Caenorhabditis elegans maternal-effect
sterile 4 protein.
Length = 898
Score = 26.2 bits (55), Expect = 3.9
Identities = 21/93 (22%), Positives = 41/93 (44%), Gaps = 4/93 (4%)
Query: 9 NLVTLTSAARRKQNDLITSDEKTDLKIPQGVFEHIKNKRDTSRRNWSRNTAS--NAYNPP 66
N + A+R++ ++ S EK K + +KN+ S+ TAS + +P
Sbjct: 681 NCMGTMGKAKREKPEVADSSEKAAKKNKSSKKKSVKNQNRKSQEAGKNGTASKKSEISPS 740
Query: 67 PYLVFNSKTGSYYPYYKFPIENNYIRRNMYKYS 99
++ + S+ +PI N ++N+ K S
Sbjct: 741 KPSTSSASSTSFVQQASWPISQN--KKNLKKNS 771
>Z81030-4|CAB02708.1| 89|Caenorhabditis elegans Hypothetical
protein C01G10.6 protein.
Length = 89
Score = 25.8 bits (54), Expect = 5.1
Identities = 10/31 (32%), Positives = 14/31 (45%)
Query: 68 YLVFNSKTGSYYPYYKFPIENNYIRRNMYKY 98
Y + + Y YY +P NN +N Y Y
Sbjct: 23 YYYYPTNNNGYQTYYYYPNNNNNNGQNTYYY 53
Score = 25.0 bits (52), Expect = 9.0
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 69 LVFNSKTGSYYPYYKFPIENN 89
L F ++ +YY YY +P NN
Sbjct: 11 LAFIAQAQAYYLYYYYPTNNN 31
>AF047661-4|AAC04435.2| 931|Caenorhabditis elegans Hypothetical
protein M70.1 protein.
Length = 931
Score = 25.8 bits (54), Expect = 5.1
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 11 VTLTSAARRKQNDLITSDEKTDLKIPQ-GVFEHIKNKRD 48
V L + + ++DLI ++ + P GVF+ +KNK+D
Sbjct: 482 VALLATKLKSESDLIVEFKENGIVKPVIGVFDCLKNKKD 520
>AF047661-2|AAK71389.1| 886|Caenorhabditis elegans Hypothetical
protein M70.3b protein.
Length = 886
Score = 25.8 bits (54), Expect = 5.1
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 11 VTLTSAARRKQNDLITSDEKTDLKIPQ-GVFEHIKNKRD 48
V L + + ++DLI ++ + P GVF+ +KNK+D
Sbjct: 472 VALLATKLKSESDLIVEFKENGIVKPVIGVFDCLKNKKD 510
>AF047661-1|AAK71388.2| 915|Caenorhabditis elegans Hypothetical
protein M70.3a protein.
Length = 915
Score = 25.8 bits (54), Expect = 5.1
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 11 VTLTSAARRKQNDLITSDEKTDLKIPQ-GVFEHIKNKRD 48
V L + + ++DLI ++ + P GVF+ +KNK+D
Sbjct: 501 VALLATKLKSESDLIVEFKENGIVKPVIGVFDCLKNKKD 539
>U41110-4|AAA82419.1| 575|Caenorhabditis elegans Hypothetical
protein ZK682.5 protein.
Length = 575
Score = 25.4 bits (53), Expect = 6.8
Identities = 18/62 (29%), Positives = 24/62 (38%)
Query: 5 GILLNLVTLTSAARRKQNDLITSDEKTDLKIPQGVFEHIKNKRDTSRRNWSRNTASNAYN 64
G L N + AAR D +T + IP F+ R RN +N A+N
Sbjct: 44 GSLQNAIQAIQAARDIPIDSLTILDTAIPTIPANAFQSFTILRLVLNRNTLQNIDDQAFN 103
Query: 65 PP 66
P
Sbjct: 104 GP 105
>AL008866-1|CAA15509.3| 724|Caenorhabditis elegans Hypothetical
protein B0019.1 protein.
Length = 724
Score = 25.4 bits (53), Expect = 6.8
Identities = 14/50 (28%), Positives = 21/50 (42%)
Query: 31 TDLKIPQGVFEHIKNKRDTSRRNWSRNTASNAYNPPPYLVFNSKTGSYYP 80
T P +F + D+ RN + N + N+ N F +T S YP
Sbjct: 509 TSSHYPPSLFAARNVQNDSGNRNTTGNNSVNSGNTGNQTNFQYETSSQYP 558
>Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 25.0 bits (52), Expect = 9.0
Identities = 12/38 (31%), Positives = 19/38 (50%)
Query: 59 ASNAYNPPPYLVFNSKTGSYYPYYKFPIENNYIRRNMY 96
A+ Y P P + +T SY + +F I N RR ++
Sbjct: 1342 ATPLYWPLPSTMLGDRTASYNGFLRFKIWNEDNRRGLH 1379
>AL110484-28|CAB54395.2| 419|Caenorhabditis elegans Hypothetical
protein Y38E10A.4 protein.
Length = 419
Score = 25.0 bits (52), Expect = 9.0
Identities = 9/15 (60%), Positives = 10/15 (66%)
Query: 85 PIENNYIRRNMYKYS 99
P+EN YI N Y YS
Sbjct: 198 PMENRYINANFYTYS 212
>AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 25.0 bits (52), Expect = 9.0
Identities = 12/38 (31%), Positives = 19/38 (50%)
Query: 59 ASNAYNPPPYLVFNSKTGSYYPYYKFPIENNYIRRNMY 96
A+ Y P P + +T SY + +F I N RR ++
Sbjct: 1342 ATPLYWPLPSTMLGDRTASYNGFLRFKIWNEDNRRGLH 1379
>AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3102
Score = 25.0 bits (52), Expect = 9.0
Identities = 12/38 (31%), Positives = 19/38 (50%)
Query: 59 ASNAYNPPPYLVFNSKTGSYYPYYKFPIENNYIRRNMY 96
A+ Y P P + +T SY + +F I N RR ++
Sbjct: 1342 ATPLYWPLPSTMLGDRTASYNGFLRFKIWNEDNRRGLH 1379
>AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform g protein.
Length = 1604
Score = 25.0 bits (52), Expect = 9.0
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 27 SDEKTDLKIPQGVFEHIKNKRDTSR 51
S+ K + KI + EH+KNK T +
Sbjct: 180 SELKKEDKIEHDILEHLKNKEPTEK 204
>AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform f protein.
Length = 1818
Score = 25.0 bits (52), Expect = 9.0
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 27 SDEKTDLKIPQGVFEHIKNKRDTSR 51
S+ K + KI + EH+KNK T +
Sbjct: 394 SELKKEDKIEHDILEHLKNKEPTEK 418
>AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform e protein.
Length = 1954
Score = 25.0 bits (52), Expect = 9.0
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 27 SDEKTDLKIPQGVFEHIKNKRDTSR 51
S+ K + KI + EH+KNK T +
Sbjct: 530 SELKKEDKIEHDILEHLKNKEPTEK 554
>AF067945-7|ABQ13059.1| 954|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform i protein.
Length = 954
Score = 25.0 bits (52), Expect = 9.0
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 27 SDEKTDLKIPQGVFEHIKNKRDTSR 51
S+ K + KI + EH+KNK T +
Sbjct: 579 SELKKEDKIEHDILEHLKNKEPTEK 603
>AF067945-6|AAV28326.1| 1167|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform c protein.
Length = 1167
Score = 25.0 bits (52), Expect = 9.0
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 27 SDEKTDLKIPQGVFEHIKNKRDTSR 51
S+ K + KI + EH+KNK T +
Sbjct: 579 SELKKEDKIEHDILEHLKNKEPTEK 603
>AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform b protein.
Length = 1685
Score = 25.0 bits (52), Expect = 9.0
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 27 SDEKTDLKIPQGVFEHIKNKRDTSR 51
S+ K + KI + EH+KNK T +
Sbjct: 579 SELKKEDKIEHDILEHLKNKEPTEK 603
>AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform d protein.
Length = 1995
Score = 25.0 bits (52), Expect = 9.0
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 27 SDEKTDLKIPQGVFEHIKNKRDTSR 51
S+ K + KI + EH+KNK T +
Sbjct: 571 SELKKEDKIEHDILEHLKNKEPTEK 595
>AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform h protein.
Length = 2006
Score = 25.0 bits (52), Expect = 9.0
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 27 SDEKTDLKIPQGVFEHIKNKRDTSR 51
S+ K + KI + EH+KNK T +
Sbjct: 583 SELKKEDKIEHDILEHLKNKEPTEK 607
>AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform a protein.
Length = 2007
Score = 25.0 bits (52), Expect = 9.0
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 27 SDEKTDLKIPQGVFEHIKNKRDTSR 51
S+ K + KI + EH+KNK T +
Sbjct: 583 SELKKEDKIEHDILEHLKNKEPTEK 607
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.318 0.134 0.398
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,791,856
Number of Sequences: 27539
Number of extensions: 113822
Number of successful extensions: 371
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 351
Number of HSP's gapped (non-prelim): 30
length of query: 99
length of database: 12,573,161
effective HSP length: 70
effective length of query: 29
effective length of database: 10,645,431
effective search space: 308717499
effective search space used: 308717499
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 52 (25.0 bits)
- SilkBase 1999-2023 -