Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001861-TA|BGIBMGA001861-PA|undefined
(99 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g03080.1 68416.m00304 NADP-dependent oxidoreductase, putative... 28 1.2
At5g08335.1 68418.m00981 isoprenylcysteine carboxyl methyltransf... 27 1.6
At4g39680.1 68417.m05614 SAP domain-containing protein contains ... 27 1.6
At3g54440.1 68416.m06023 glycoside hydrolase family 2 protein si... 27 2.1
At4g01630.1 68417.m00212 expansin, putative (EXP17) similar to a... 26 4.8
At3g04610.1 68416.m00493 KH domain-containing protein similar pu... 25 6.4
At1g53300.1 68414.m06041 thioredoxin family protein contains Pfa... 25 6.4
At5g60310.1 68418.m07559 lectin protein kinase, putative similar... 25 8.5
At5g28400.1 68418.m03448 expressed protein 25 8.5
At5g28320.1 68418.m03438 expressed protein This is likely a pseu... 25 8.5
At4g35790.3 68417.m05086 phospholipase D delta / PLD delta (PLDD... 25 8.5
At4g35790.2 68417.m05085 phospholipase D delta / PLD delta (PLDD... 25 8.5
At4g35790.1 68417.m05084 phospholipase D delta / PLD delta (PLDD... 25 8.5
At4g29790.1 68417.m04242 expressed protein 25 8.5
At3g53540.1 68416.m05912 expressed protein 25 8.5
At2g46000.1 68415.m05722 expressed protein 25 8.5
At1g26250.1 68414.m03202 proline-rich extensin, putative similar... 25 8.5
>At3g03080.1 68416.m00304 NADP-dependent oxidoreductase, putative
similar to probable NADP-dependent oxidoreductase
(zeta-crystallin homolog) P2 [SP|Q39173][gi:886430],
Arabidopsis thaliana; similar to allyl alcohol
dehydrogenase [Nicotiana tabacum] GI:6692816
Length = 350
Score = 27.9 bits (59), Expect = 1.2
Identities = 11/19 (57%), Positives = 15/19 (78%)
Query: 20 KQNDLITSDEKTDLKIPQG 38
K++DLI +D DLKIP+G
Sbjct: 25 KESDLIFTDSTIDLKIPEG 43
>At5g08335.1 68418.m00981 isoprenylcysteine carboxyl
methyltransferase family protein / ICMT family protein
similar to SP|O60725 Protein-S isoprenylcysteine
O-methyltransferase (EC 2.1.1.100) (Isoprenylcysteine
carboxylmethyltransferase) {Homo sapiens}; contains Pfam
profile PF04140: Isoprenylcysteine carboxyl
methyltransferase (ICMT) family
Length = 197
Score = 27.5 bits (58), Expect = 1.6
Identities = 19/93 (20%), Positives = 41/93 (44%), Gaps = 1/93 (1%)
Query: 1 MIIFGILLNLVTLTSAARRKQNDLITSDEKTDLKIPQGVFEHIKNKRDTSRRNWSRNTAS 60
MII G +L + +A R + + E+ + +GV++ +++ + WS T
Sbjct: 85 MIILGEILRKTAIITAGRSFTHLIKIRREEHHKLVTEGVYQIMRHPSYSGFLIWSVGTQV 144
Query: 61 NAYNPPPYLVFNSKTGSYYPYYKFPIENNYIRR 93
NP + F ++ + P E +Y+++
Sbjct: 145 MLCNPISAIAFAVVVWRFFA-ERIPYEEHYLKQ 176
>At4g39680.1 68417.m05614 SAP domain-containing protein contains
Pfam domain PF02037: SAP domain
Length = 633
Score = 27.5 bits (58), Expect = 1.6
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 7/61 (11%)
Query: 20 KQNDLITSDEKTDLKIPQGVFEHIKNKRDTSRRNWSRNTASNAYNPPPYLVFNSKTGSYY 79
K + L+ SD++ K+P E + N RR W+ SN+ P + NS T +
Sbjct: 369 KSHPLVASDKR---KLPANDQEAVGNNEPAKRRRWN----SNSIKVPEAQITNSATPTTT 421
Query: 80 P 80
P
Sbjct: 422 P 422
>At3g54440.1 68416.m06023 glycoside hydrolase family 2 protein
similar to beta-galactosidase (lactase) from Alteromonas
haloplanktis [SP|P81650]; contains Pfam glycoside
hydrolase domains PF02836, PF02837, PF02929, PF02930
Length = 1107
Score = 27.1 bits (57), Expect = 2.1
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 64 NPPPYLVFNSKTGSYYPYYKFPIE 87
N PPY+ ++ TG Y Y++ P E
Sbjct: 147 NDPPYVPEDNPTGCYRTYFQIPKE 170
>At4g01630.1 68417.m00212 expansin, putative (EXP17) similar to
alpha-expansin precursor GI:4027891 from [Nicotiana
tabacum]; alpha-expansin gene family, PMID:11641069
Length = 255
Score = 25.8 bits (54), Expect = 4.8
Identities = 10/19 (52%), Positives = 11/19 (57%)
Query: 45 NKRDTSRRNWSRNTASNAY 63
NK +T RNW N SN Y
Sbjct: 197 NKWETMSRNWGANYQSNTY 215
>At3g04610.1 68416.m00493 KH domain-containing protein similar
putative nucleic acid binding protein GB:CAB39665
[Arabidopsis thaliana]; Pfam HMM hit: KH domain family
of RNA binding proteins
Length = 577
Score = 25.4 bits (53), Expect = 6.4
Identities = 9/18 (50%), Positives = 12/18 (66%)
Query: 63 YNPPPYLVFNSKTGSYYP 80
+NPPPY+ + SYYP
Sbjct: 400 HNPPPYMQPPPRHDSYYP 417
>At1g53300.1 68414.m06041 thioredoxin family protein contains Pfam
profiles PF00085: Thioredoxin, PF00515: TPR Domain;
similar to tetratricopeptide repeat protein 2
(GI:7248701) [Drosophila melanogaster]; similar to DnaJ
homolog subfamily C member 7 (Tetratricopeptide repeat
protein 2) (TPR repeat protein 2) (Swiss-Prot:Q99615)
[Homo sapiens]
Length = 699
Score = 25.4 bits (53), Expect = 6.4
Identities = 12/27 (44%), Positives = 17/27 (62%)
Query: 6 ILLNLVTLTSAARRKQNDLITSDEKTD 32
+L N VTL + AR + NDL S+ T+
Sbjct: 457 MLHNTVTLVARARARGNDLYKSERYTE 483
>At5g60310.1 68418.m07559 lectin protein kinase, putative similar to
receptor lectin kinase 3 [Arabidopsis thaliana]
gi|4100060|gb|AAD00733; contains protein kinase domain,
Pfam:PF00069; contains legume lectins alpha and beta
domains, Pfam:PF00138 and Pfam:PF00139
Length = 616
Score = 25.0 bits (52), Expect = 8.5
Identities = 13/36 (36%), Positives = 19/36 (52%)
Query: 9 NLVTLTSAARRKQNDLITSDEKTDLKIPQGVFEHIK 44
NLV L RRK L+ SD T+ + + +F+ K
Sbjct: 398 NLVPLLGYCRRKHEFLLVSDYMTNGSLDEHLFDDQK 433
>At5g28400.1 68418.m03448 expressed protein
Length = 996
Score = 25.0 bits (52), Expect = 8.5
Identities = 10/34 (29%), Positives = 15/34 (44%)
Query: 28 DEKTDLKIPQGVFEHIKNKRDTSRRNWSRNTASN 61
+E K G EHI+ + + + NW T N
Sbjct: 552 EELKSAKSSSGGTEHIEKEEPSGKENWIEKTTMN 585
>At5g28320.1 68418.m03438 expressed protein This is likely a
pseudogene.
Length = 967
Score = 25.0 bits (52), Expect = 8.5
Identities = 10/34 (29%), Positives = 15/34 (44%)
Query: 28 DEKTDLKIPQGVFEHIKNKRDTSRRNWSRNTASN 61
+E K G EHI+ + + + NW T N
Sbjct: 541 EELKSAKSSSGGTEHIEKEEPSGKENWIEKTTMN 574
>At4g35790.3 68417.m05086 phospholipase D delta / PLD delta
(PLDDELTA) identical to phospholipase D delta SP: Q9C5Y0
from [Arabidopsis thaliana]; supporting cDNA
gi|11761141|dbj|AB031047.1|
Length = 693
Score = 25.0 bits (52), Expect = 8.5
Identities = 13/56 (23%), Positives = 22/56 (39%)
Query: 19 RKQNDLITSDEKTDLKIPQGVFEHIKNKRDTSRRNWSRNTASNAYNPPPYLVFNSK 74
R +ITSD + +PQ + +++ W + +P YL F K
Sbjct: 69 RSHRKVITSDPYVTVVVPQATLARTRVLKNSQEPLWDEKFNISIAHPFAYLEFQVK 124
>At4g35790.2 68417.m05085 phospholipase D delta / PLD delta
(PLDDELTA) identical to phospholipase D delta SP: Q9C5Y0
from [Arabidopsis thaliana]; supporting cDNA
gi|11761141|dbj|AB031047.1|
Length = 857
Score = 25.0 bits (52), Expect = 8.5
Identities = 13/56 (23%), Positives = 22/56 (39%)
Query: 19 RKQNDLITSDEKTDLKIPQGVFEHIKNKRDTSRRNWSRNTASNAYNPPPYLVFNSK 74
R +ITSD + +PQ + +++ W + +P YL F K
Sbjct: 69 RSHRKVITSDPYVTVVVPQATLARTRVLKNSQEPLWDEKFNISIAHPFAYLEFQVK 124
>At4g35790.1 68417.m05084 phospholipase D delta / PLD delta
(PLDDELTA) identical to phospholipase D delta SP: Q9C5Y0
from [Arabidopsis thaliana]; supporting cDNA
gi|11761141|dbj|AB031047.1|
Length = 868
Score = 25.0 bits (52), Expect = 8.5
Identities = 13/56 (23%), Positives = 22/56 (39%)
Query: 19 RKQNDLITSDEKTDLKIPQGVFEHIKNKRDTSRRNWSRNTASNAYNPPPYLVFNSK 74
R +ITSD + +PQ + +++ W + +P YL F K
Sbjct: 69 RSHRKVITSDPYVTVVVPQATLARTRVLKNSQEPLWDEKFNISIAHPFAYLEFQVK 124
>At4g29790.1 68417.m04242 expressed protein
Length = 1211
Score = 25.0 bits (52), Expect = 8.5
Identities = 13/31 (41%), Positives = 15/31 (48%)
Query: 36 PQGVFEHIKNKRDTSRRNWSRNTASNAYNPP 66
P GV +H K+ S RN S S A PP
Sbjct: 601 PMGVMKHGTAKQLRSARNGSDKNESRAGRPP 631
>At3g53540.1 68416.m05912 expressed protein
Length = 924
Score = 25.0 bits (52), Expect = 8.5
Identities = 12/47 (25%), Positives = 23/47 (48%)
Query: 8 LNLVTLTSAARRKQNDLITSDEKTDLKIPQGVFEHIKNKRDTSRRNW 54
L L+ L SA ++ L++SDE TD + + + ++ +W
Sbjct: 729 LQLLKLESATYKEGGMLVSSDEDTDQEESSTITDEAMITKELREEDW 775
>At2g46000.1 68415.m05722 expressed protein
Length = 208
Score = 25.0 bits (52), Expect = 8.5
Identities = 10/43 (23%), Positives = 20/43 (46%)
Query: 25 ITSDEKTDLKIPQGVFEHIKNKRDTSRRNWSRNTASNAYNPPP 67
I K ++I + + N+ D S + W + + ++PPP
Sbjct: 28 IAEATKRRIEISDDLDDVEDNEEDESWKEWGKKATTPEFDPPP 70
>At1g26250.1 68414.m03202 proline-rich extensin, putative similar to
extensin gi|1165322|gb|AAB53156; contains proline-rich
extensin domains, INTERPRO:IPR002965
Length = 443
Score = 25.0 bits (52), Expect = 8.5
Identities = 13/38 (34%), Positives = 17/38 (44%)
Query: 53 NWSRNTASNAYNPPPYLVFNSKTGSYYPYYKFPIENNY 90
N+S A Y PPPY+ S + Y Y P +Y
Sbjct: 373 NYSPPPAPYVYKPPPYVYSYSPPPAPYVYKPPPYVYSY 410
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.398
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,551,060
Number of Sequences: 28952
Number of extensions: 100316
Number of successful extensions: 338
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 319
Number of HSP's gapped (non-prelim): 21
length of query: 99
length of database: 12,070,560
effective HSP length: 70
effective length of query: 29
effective length of database: 10,043,920
effective search space: 291273680
effective search space used: 291273680
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 52 (25.0 bits)
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