Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001860-TA|BGIBMGA001860-PA|undefined
         (178 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    24   0.62 
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   3.3  
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          21   5.8  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   5.8  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           21   5.8  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        21   7.6  

>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 24.2 bits (50), Expect = 0.62
 Identities = 15/60 (25%), Positives = 28/60 (46%), Gaps = 7/60 (11%)

Query: 102 GIIFSEKEIDISTCPDLRMELPSTAKPLDHDVPDLKHPTDHGHKPQEQTHKSQEAPKIPD 161
           G++F++   +   C DL   +  T++P       L+ P    H P++  + + E P I D
Sbjct: 71  GMVFNDYSSEYEKC-DLPFNIDCTSRP------KLQEPQPSQHCPRKHGYFAHEEPHICD 123


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 11/30 (36%), Positives = 16/30 (53%)

Query: 98  IKSAGIIFSEKEIDISTCPDLRMELPSTAK 127
           IK   ++ +EK   I T P +R EL   A+
Sbjct: 588 IKRRYVLLNEKVEAIKTSPKMRHELQKLAQ 617


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 21.0 bits (42), Expect = 5.8
 Identities = 10/28 (35%), Positives = 12/28 (42%)

Query: 57 FFAQPTVGNGYEPIDNRPYIVNPPKDYN 84
          F  + T    YE     P I  PP D+N
Sbjct: 26 FLQEKTTYEYYENNQALPPITYPPSDWN 53


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.0 bits (42), Expect = 5.8
 Identities = 7/18 (38%), Positives = 12/18 (66%)

Query: 74  PYIVNPPKDYNPNGNGYE 91
           P+IV  P++ NP+   Y+
Sbjct: 192 PFIVRVPEEDNPHAKLYD 209


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 21.0 bits (42), Expect = 5.8
 Identities = 10/28 (35%), Positives = 12/28 (42%)

Query: 57 FFAQPTVGNGYEPIDNRPYIVNPPKDYN 84
          F  + T    YE     P I  PP D+N
Sbjct: 17 FLQEKTTYEYYENNQALPPITYPPSDWN 44


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 20.6 bits (41), Expect = 7.6
 Identities = 11/37 (29%), Positives = 15/37 (40%)

Query: 122 LPSTAKPLDHDVPDLKHPTDHGHKPQEQTHKSQEAPK 158
           LP    PLD +   LK      H P +     +E+ K
Sbjct: 337 LPFELLPLDSEPGMLKRKRQKYHDPSQLLRHVEESDK 373


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.314    0.136    0.409 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 50,143
Number of Sequences: 317
Number of extensions: 2501
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of query: 178
length of database: 114,650
effective HSP length: 53
effective length of query: 125
effective length of database: 97,849
effective search space: 12231125
effective search space used: 12231125
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.4 bits)
S2: 41 (20.6 bits)