Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001860-TA|BGIBMGA001860-PA|undefined
(178 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_01_0801 - 7071455-7071847 30 0.92
04_04_1222 - 31848892-31849347 30 0.92
03_06_0513 - 34432798-34433043,34433272-34433436,34433557-344338... 30 0.92
12_01_1095 + 11436012-11436053,11436322-11436595,11470730-114707... 30 1.2
08_01_0748 + 7034074-7034076,7034136-7034876 30 1.2
07_01_0814 - 6464072-6464544,6464770-6465208 30 1.2
01_06_1698 - 39264075-39264468,39264545-39264696,39264780-392648... 30 1.2
09_01_0001 - 66206-66907 29 1.6
01_02_0134 + 11470543-11470608,11471718-11471775,11472025-114722... 29 1.6
03_05_1091 + 30322035-30322739,30322861-30324043,30324114-303251... 29 2.8
12_02_0883 - 23982022-23982825 28 4.9
11_01_0062 - 476027-476044,476791-477195,477287-477574,477653-47... 28 4.9
07_03_1732 + 29109612-29110623,29110712-29110786,29111176-291113... 28 4.9
06_03_0649 + 23138442-23138842,23139576-23139849,23139929-231405... 27 6.5
04_04_1291 - 32404716-32404946,32405377-32405478,32405731-324059... 27 6.5
04_01_0438 - 5723451-5723759,5723795-5723863,5724025-5724210,572... 27 6.5
03_06_0471 + 34169562-34169892,34170121-34170347 27 6.5
03_02_0675 - 10333083-10333740,10334910-10335039,10335218-10335350 27 6.5
08_02_1413 + 26897815-26899299 27 8.5
>11_01_0801 - 7071455-7071847
Length = 130
Score = 30.3 bits (65), Expect = 0.92
Identities = 13/40 (32%), Positives = 19/40 (47%)
Query: 125 TAKPLDHDVPDLKHPTDHGHKPQEQTHKSQEAPKIPDSKD 164
T PL H+ P + T + +E H+S +PDS D
Sbjct: 90 TLNPLSHEAPGVDFSTAYSVSDEEFLHRSNFGKAVPDSFD 129
>04_04_1222 - 31848892-31849347
Length = 151
Score = 30.3 bits (65), Expect = 0.92
Identities = 13/40 (32%), Positives = 19/40 (47%)
Query: 125 TAKPLDHDVPDLKHPTDHGHKPQEQTHKSQEAPKIPDSKD 164
T PL H+ P + T + +E H+S +PDS D
Sbjct: 111 TLNPLSHEAPGVDFSTAYSVSDEEFLHRSNFGKAVPDSFD 150
>03_06_0513 -
34432798-34433043,34433272-34433436,34433557-34433842,
34434972-34435054,34435388-34435495,34435687-34435944,
34436388-34436555,34436865-34437090,34437923-34438035,
34438180-34438548,34439475-34439516,34439576-34439686,
34439883-34440086
Length = 792
Score = 30.3 bits (65), Expect = 0.92
Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Query: 95 ILYIKSAGIIFSEKEIDISTCPDLRMELPSTAKPLDHDVPDLK 137
+L IK+ G+I E+EI+ +TC L L K LD+D L+
Sbjct: 502 LLAIKNDGVILGEREIEGTTC--LESLLLRIVKVLDYDASKLR 542
>12_01_1095 +
11436012-11436053,11436322-11436595,11470730-11470762,
11470770-11471494
Length = 357
Score = 29.9 bits (64), Expect = 1.2
Identities = 15/52 (28%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Query: 114 TCPDLRMELPSTAKPLDHDVPDLKHPT-DHGHKPQEQTHKSQEAPKIPDSKD 164
TCP R++L S + + VPD P D +E+ + P P+ +D
Sbjct: 296 TCPPPRLQLASKIRVMGEAVPDRAEPVIDIISDEEEEEDPEEREPATPEEED 347
>08_01_0748 + 7034074-7034076,7034136-7034876
Length = 247
Score = 29.9 bits (64), Expect = 1.2
Identities = 15/52 (28%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Query: 114 TCPDLRMELPSTAKPLDHDVPDLKHPT-DHGHKPQEQTHKSQEAPKIPDSKD 164
TCP R++L S + + VPD P D +E+ + P P+ +D
Sbjct: 186 TCPPPRLQLASKIRVMGEAVPDRAEPVIDIISDEEEEEDPEEREPATPEEED 237
>07_01_0814 - 6464072-6464544,6464770-6465208
Length = 303
Score = 29.9 bits (64), Expect = 1.2
Identities = 15/52 (28%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Query: 114 TCPDLRMELPSTAKPLDHDVPDLKHPT-DHGHKPQEQTHKSQEAPKIPDSKD 164
TCP R++L S + + VPD P D +E+ + P P+ +D
Sbjct: 242 TCPPPRLQLASKIRVMGEAVPDRAEPVIDIISDEEEEEDPEEREPATPEEED 293
>01_06_1698 -
39264075-39264468,39264545-39264696,39264780-39264830,
39264946-39265122,39265256-39265348,39265489-39265555,
39265695-39265768,39266007-39266088,39266182-39266255,
39266354-39266383,39266475-39266534,39267524-39268225
Length = 651
Score = 29.9 bits (64), Expect = 1.2
Identities = 22/87 (25%), Positives = 39/87 (44%), Gaps = 4/87 (4%)
Query: 24 PVKVVENADSVRDAKKRYGVNVVDNNNPGHADPFFAQPTVGNGYEP--IDNRPYIVNPPK 81
P++ E+ ++ R Y V + PG+ + FA E P + PP+
Sbjct: 97 PLQTPESQEAFRMLTPAYREKV--ESEPGYEERLFATRDTPEPLETSWAGELPLRLVPPR 154
Query: 82 DYNPNGNGYEPIEILYIKSAGIIFSEK 108
D+ P G +P E+ +I+ A F+E+
Sbjct: 155 DWPPPGWEVDPGELEFIREAHREFTER 181
>09_01_0001 - 66206-66907
Length = 233
Score = 29.5 bits (63), Expect = 1.6
Identities = 15/52 (28%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Query: 114 TCPDLRMELPSTAKPLDHDVPDLKHPT-DHGHKPQEQTHKSQEAPKIPDSKD 164
TCP R++L S + + VPD P D +E+ + P P+ +D
Sbjct: 172 TCPPPRLQLASKIRVMGEAVPDRAEPVIDIISDEEEEEDLEEREPATPEEED 223
>01_02_0134 +
11470543-11470608,11471718-11471775,11472025-11472278,
11472307-11472511,11472907-11473142
Length = 272
Score = 29.5 bits (63), Expect = 1.6
Identities = 16/69 (23%), Positives = 30/69 (43%)
Query: 103 IIFSEKEIDISTCPDLRMELPSTAKPLDHDVPDLKHPTDHGHKPQEQTHKSQEAPKIPDS 162
+I SEKE+D+ P+ ++ K H V +++ TD P + + P +
Sbjct: 103 LIVSEKELDVQVVPENEPKVQEPKKSKSHQVWNVETETDVYEDPCPAKNDVENTPVDNNG 162
Query: 163 KDNKDLPNV 171
D ++ V
Sbjct: 163 TDKSEVHRV 171
>03_05_1091 +
30322035-30322739,30322861-30324043,30324114-30325105,
30326409-30326798,30326896-30330060
Length = 2144
Score = 28.7 bits (61), Expect = 2.8
Identities = 13/39 (33%), Positives = 19/39 (48%)
Query: 79 PPKDYNPNGNGYEPIEILYIKSAGIIFSEKEIDISTCPD 117
PP + NGYE + + +K+ EK + IS PD
Sbjct: 461 PPGSFRTPHNGYEEVHVPALKAKPYENGEKVVKISDMPD 499
>12_02_0883 - 23982022-23982825
Length = 267
Score = 27.9 bits (59), Expect = 4.9
Identities = 12/38 (31%), Positives = 20/38 (52%)
Query: 19 ANAQDPVKVVENADSVRDAKKRYGVNVVDNNNPGHADP 56
+++ D +K + D+ D + G VD N P H+DP
Sbjct: 206 SSSMDDLKTLAPTDTNSDKETNTGNGGVDTNIPDHSDP 243
>11_01_0062 -
476027-476044,476791-477195,477287-477574,477653-477830,
478005-478133,478531-478729,478832-478970,479130-479195,
480459-480580,480672-480742,480819-480903,481335-481453,
481577-481687,481945-482117,482375-482446,482768-482862,
483361-483450,483550-483646
Length = 818
Score = 27.9 bits (59), Expect = 4.9
Identities = 17/54 (31%), Positives = 24/54 (44%)
Query: 88 NGYEPIEILYIKSAGIIFSEKEIDISTCPDLRMELPSTAKPLDHDVPDLKHPTD 141
N YE I + S F E I + P +R LPS A+ ++ D+ L D
Sbjct: 200 NHYEKYAIFMMLSKITSFEEGAILCNFLPLIREHLPSAAEEIESDIISLAQSED 253
>07_03_1732 +
29109612-29110623,29110712-29110786,29111176-29111333,
29111714-29111937,29112136-29112745
Length = 692
Score = 27.9 bits (59), Expect = 4.9
Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Query: 123 PSTAKPLDHDVPDLKHPTDHGHKPQEQTHKSQEAPKIPDSK 163
P+ PLDH D HP D+ P+E+ Q K+ D +
Sbjct: 109 PTGTSPLDHF--DQIHPGDNQFSPKEKDRSGQCLDKVDDPR 147
>06_03_0649 +
23138442-23138842,23139576-23139849,23139929-23140562,
23140771-23140826,23141178-23141282,23141295-23141535,
23142686-23142690
Length = 571
Score = 27.5 bits (58), Expect = 6.5
Identities = 14/49 (28%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 106 SEKEIDISTCPDLRMELPSTAKPLDHDVPDLK-HPTDHGHKPQEQTHKS 153
+E EI D+ E+ S+ L+ + D + HP H +P+E+ H++
Sbjct: 473 AEDEIMDEIMDDVLHEMMSSIGDLEREAADHRLHPRKHIKRPREEAHQN 521
>04_04_1291 -
32404716-32404946,32405377-32405478,32405731-32405910,
32406023-32406100,32407501-32407620,32407713-32407805,
32408369-32408443,32408673-32408828,32408957-32409040,
32409773-32410450,32411814-32411877,32411968-32411978
Length = 623
Score = 27.5 bits (58), Expect = 6.5
Identities = 25/89 (28%), Positives = 34/89 (38%), Gaps = 5/89 (5%)
Query: 70 IDNRPYIVNPPKDYNPNGNGYEPIEILYIKSAGIIFSEKEIDISTCPDLRMELPSTAKPL 129
+ N +P KD G G I ++ EKE P + E + AKPL
Sbjct: 135 VQNSNNEAHPQKDLPTEGMGPPEIPTTDEQTVSSEEKEKETLAQGTPQIPDEHGAAAKPL 194
Query: 130 DHDVP--DLKHPTDH---GHKPQEQTHKS 153
D+P D+ D G EQT K+
Sbjct: 195 SQDIPVIDINPSVDDKATGEVLPEQTDKT 223
>04_01_0438 -
5723451-5723759,5723795-5723863,5724025-5724210,
5724297-5724558,5724662-5724960,5725040-5725453,
5725533-5725899,5726002-5726146,5726562-5727558
Length = 1015
Score = 27.5 bits (58), Expect = 6.5
Identities = 11/40 (27%), Positives = 19/40 (47%)
Query: 130 DHDVPDLKHPTDHGHKPQEQTHKSQEAPKIPDSKDNKDLP 169
D D PD+ P+ G P T + + +PD + + +P
Sbjct: 948 DFDFPDIIGPSQLGGAPPVHTQEQSPSTPLPDPRATRAVP 987
>03_06_0471 + 34169562-34169892,34170121-34170347
Length = 185
Score = 27.5 bits (58), Expect = 6.5
Identities = 15/45 (33%), Positives = 18/45 (40%), Gaps = 1/45 (2%)
Query: 49 NNPGHADPFFAQPTVGNG-YEPIDNRPYIVNPPKDYNPNGNGYEP 92
N+PG P+ G Y P P PP Y P+ GY P
Sbjct: 37 NSPGQYPTPGGYPSAPPGQYPPAGGYPGAQYPPSGYPPSQGGYPP 81
>03_02_0675 - 10333083-10333740,10334910-10335039,10335218-10335350
Length = 306
Score = 27.5 bits (58), Expect = 6.5
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Query: 123 PSTAKPLDHDVPDLKHPTDHGHKPQEQ-THKSQEAPKIPDSK 163
P P+ HD P H H+ Q+ TH +AP PDS+
Sbjct: 151 PPPCLPVFHDAPYFA-ALQHQHQQQQVVTHVDADAPASPDSQ 191
>08_02_1413 + 26897815-26899299
Length = 494
Score = 27.1 bits (57), Expect = 8.5
Identities = 15/54 (27%), Positives = 25/54 (46%), Gaps = 3/54 (5%)
Query: 33 SVRDAKKRYGVNVVDNNNPGHADPFFAQPTVGNGYEPIDNRPY---IVNPPKDY 83
++ + K RY +++ NNPG P A EP R Y + PP+++
Sbjct: 114 AMEEHKWRYLRDLLARNNPGGDAPLAAYARAARELEPAARRRYAEPVALPPREF 167
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.314 0.136 0.409
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,208,407
Number of Sequences: 37544
Number of extensions: 296235
Number of successful extensions: 483
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 475
Number of HSP's gapped (non-prelim): 20
length of query: 178
length of database: 14,793,348
effective HSP length: 78
effective length of query: 100
effective length of database: 11,864,916
effective search space: 1186491600
effective search space used: 1186491600
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 57 (27.1 bits)
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