GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001860-TA|BGIBMGA001860-PA|undefined
         (178 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    25   1.3  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    23   4.1  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    23   4.1  
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    23   4.1  
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    23   5.4  
AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.            23   5.4  

>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adhesion
            protein protein.
          Length = 1881

 Score = 25.0 bits (52), Expect = 1.3
 Identities = 23/87 (26%), Positives = 32/87 (36%), Gaps = 3/87 (3%)

Query: 12   VLALLAMANAQDPVKVVENADSVRDAKKRYGVNVVDNNNPGHADPFFAQPTVGNGYEPID 71
            VL LL + +    + V    D    +   + V   D   P  A   F +  V    +  D
Sbjct: 999  VLELLHVDDETGEIVVRNRIDHEEYSWLNFSVRAADTGTPPRAS--FVEVFV-QVLDEND 1055

Query: 72   NRPYIVNPPKDYNPNGNGYEPIEILYI 98
            N PY V+   DY  + N     EI  I
Sbjct: 1056 NNPYFVDSVNDYYVSENASVGAEIAII 1082


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 23.4 bits (48), Expect = 4.1
 Identities = 8/24 (33%), Positives = 11/24 (45%)

Query: 128 PLDHDVPDLKHPTDHGHKPQEQTH 151
           P  H     +HP+    +P  QTH
Sbjct: 260 PSSHQQQSQQHPSSQHQQPTHQTH 283


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 23.4 bits (48), Expect = 4.1
 Identities = 8/24 (33%), Positives = 11/24 (45%)

Query: 128 PLDHDVPDLKHPTDHGHKPQEQTH 151
           P  H     +HP+    +P  QTH
Sbjct: 260 PSSHQQQSQQHPSSQHQQPTHQTH 283


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 23.4 bits (48), Expect = 4.1
 Identities = 8/24 (33%), Positives = 11/24 (45%)

Query: 128 PLDHDVPDLKHPTDHGHKPQEQTH 151
           P  H     +HP+    +P  QTH
Sbjct: 212 PSSHQQQSQQHPSSQHQQPTHQTH 235


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 23.0 bits (47), Expect = 5.4
 Identities = 9/32 (28%), Positives = 20/32 (62%)

Query: 105  FSEKEIDISTCPDLRMELPSTAKPLDHDVPDL 136
            ++E+E+D    PDL+ ++    + L+ + P+L
Sbjct: 1055 YTEEELDSYKLPDLQYQISILEEKLNANKPNL 1086


>AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.
          Length = 1152

 Score = 23.0 bits (47), Expect = 5.4
 Identities = 10/31 (32%), Positives = 17/31 (54%)

Query: 132 DVPDLKHPTDHGHKPQEQTHKSQEAPKIPDS 162
           +VP+L  PT  G++  E   ++     +PDS
Sbjct: 693 EVPELPRPTTFGYRFIELHLENNNISALPDS 723


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.314    0.136    0.409 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 221,921
Number of Sequences: 2123
Number of extensions: 11162
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 2
Number of HSP's gapped (non-prelim): 6
length of query: 178
length of database: 516,269
effective HSP length: 60
effective length of query: 118
effective length of database: 388,889
effective search space: 45888902
effective search space used: 45888902
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 45 (22.2 bits)