GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001858-TA|BGIBMGA001858-PA|IPR013594|Dynein heavy chain,
N-terminal region 1
         (529 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB107248-1|BAE72063.1|  278|Anopheles gambiae Bcl-2 family prote...    25   3.8  
AJ697719-1|CAG26912.1|  174|Anopheles gambiae putative odorant-b...    25   6.6  
AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking p...    24   8.8  

>AB107248-1|BAE72063.1|  278|Anopheles gambiae Bcl-2 family protein
           Anob-1 protein.
          Length = 278

 Score = 25.4 bits (53), Expect = 3.8
 Identities = 11/48 (22%), Positives = 26/48 (54%), Gaps = 2/48 (4%)

Query: 451 KILTLLEKAGSTYLEVIEDESP--LQQVVETLPEMVESIYMMWVLSKG 496
           K+++L   AG   ++ +  +    LQQ++E   +++E     W++ +G
Sbjct: 177 KVISLFAIAGGLAVDCVRQDHADYLQQLIEGTADVIEEDLSGWLVERG 224


>AJ697719-1|CAG26912.1|  174|Anopheles gambiae putative
           odorant-binding protein OBPjj9 protein.
          Length = 174

 Score = 24.6 bits (51), Expect = 6.6
 Identities = 11/22 (50%), Positives = 12/22 (54%)

Query: 379 EQRGRVGFNDPALTKQLEEAVM 400
           EQRG     DPA  KQ+ E  M
Sbjct: 45  EQRGAAMLADPATVKQVPEVTM 66


>AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking
           protein.
          Length = 932

 Score = 24.2 bits (50), Expect = 8.8
 Identities = 13/46 (28%), Positives = 22/46 (47%)

Query: 251 QGEIPLAESSYLTMLKMPDYVLTGITSGKAYIRLFEKQFREITVLT 296
           +GEI LAE+  +  +    Y+   +  G   +R  E   ++I V T
Sbjct: 406 RGEITLAETKSINEVGTVRYMAPEVLEGAVNLRDCESALKQIDVYT 451


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.318    0.136    0.395 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 489,122
Number of Sequences: 2123
Number of extensions: 19387
Number of successful extensions: 39
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 37
Number of HSP's gapped (non-prelim): 3
length of query: 529
length of database: 516,269
effective HSP length: 67
effective length of query: 462
effective length of database: 374,028
effective search space: 172800936
effective search space used: 172800936
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 50 (24.2 bits)