Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001857-TA|BGIBMGA001857-PA|IPR002557|Chitin binding
Peritrophin-A
(1276 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_01_0527 - 4177928-4178235,4178849-4181438 34 0.64
04_04_0027 + 22232781-22233051,22234256-22234329,22234471-222346... 34 0.84
03_05_0520 + 25139314-25139364,25139580-25139711,25141594-251417... 34 0.84
12_01_1069 - 11060045-11060262,11060404-11060545,11060624-110607... 33 1.1
11_06_0388 + 23048576-23051546,23051830-23052371,23052444-230525... 33 1.5
10_08_0643 + 19541991-19542188,19543261-19543515,19543598-195437... 33 1.5
03_01_0448 - 3444608-3444814,3446419-3446497,3446567-3446691,344... 33 1.5
01_01_0172 + 1485170-1485176,1485480-1485511,1485622-1485870,148... 33 1.5
07_01_0566 + 4207894-4207974,4208090-4208144,4208671-4208759,420... 33 2.0
03_06_0140 + 31951569-31951710,31951943-31952037,31952141-319539... 32 2.6
03_03_0016 - 13761007-13761489,13761929-13762096,13763086-137631... 32 2.6
11_06_0638 - 25719109-25719334,25719485-25719510,25719974-257200... 32 3.4
09_06_0199 + 21526872-21527250,21527431-21527594,21527673-215277... 32 3.4
05_01_0100 + 670297-670525,671344-671559,671653-671758,671890-67... 32 3.4
01_01_0078 + 587975-588179,588506-588606,589087-589167,589240-59... 32 3.4
06_01_0039 - 386576-387098,387173-387468,387744-388067,388165-38... 31 4.5
05_01_0573 - 5083030-5083151,5084639-5084738,5084790-5084829,508... 31 4.5
02_05_0072 - 25598690-25598702,25598820-25599001,25599111-255992... 31 4.5
09_02_0121 + 4502628-4502696,4503727-4503829,4504205-4504328,450... 31 6.0
04_03_0495 + 16545795-16546029,16546125-16546360,16546863-16547144 31 6.0
11_06_0678 + 26166476-26166660,26166753-26166807,26166925-261670... 31 7.9
11_02_0123 - 8550193-8550213,8550434-8550682,8550787-8550834,855... 31 7.9
>12_01_0527 - 4177928-4178235,4178849-4181438
Length = 965
Score = 34.3 bits (75), Expect = 0.64
Identities = 35/120 (29%), Positives = 53/120 (44%), Gaps = 10/120 (8%)
Query: 684 ILTSQSPTVDTKSSNIVTLPSNKLEPPLITN-NVLNKNSTQDLPYFQESFLPPANTIERT 742
ILT PT+ TK S ++ L N L + +N ++L+ DL Y PA+ +
Sbjct: 506 ILTGTIPTMPTKLSTVLNLSHNNLSGSIPSNIDLLSDLEILDLSYNNLYGEVPASLAKLE 565
Query: 743 VTIRITLPEKVASYLFKNSNKTDF-DKLEILNTGNSDYLVLSNDFRTNPNFVTTGKLNAH 801
+L + V SY + + F ++I GN D L+N R N T+GK H
Sbjct: 566 -----SLTQLVLSYNHLSGSIPIFRQHVDIATNGNPD---LTNGTRNYDNAPTSGKRRTH 617
>04_04_0027 +
22232781-22233051,22234256-22234329,22234471-22234638,
22234812-22234971,22235062-22235145,22235781-22236078,
22236158-22236364,22236465-22236735,22236971-22237055,
22237141-22237182,22237302-22237350,22237825-22237894,
22238314-22238463,22238592-22238619,22238856-22238990,
22240693-22241469,22242133-22242192,22242367-22242413
Length = 991
Score = 33.9 bits (74), Expect = 0.84
Identities = 28/115 (24%), Positives = 51/115 (44%), Gaps = 10/115 (8%)
Query: 312 QNTSRRQRG------RQRSLNTDNKKSTNLSESKKLTNTDSVTNQKYTSNQQETQTISNQ 365
+NTS + G + + ++TD ++ T SKK N T +K N+ E QT Q
Sbjct: 402 KNTSEAEAGAHQNTDKTKHIHTDAEEDTAQEASKKKKNKKKKTQEK---NESENQTPKTQ 458
Query: 366 KANIRFNNGISDDIQ-NEVKQNIVSTLDTAASTVVTKTVPFRKTIEQTKPGKAKS 419
+ N + N + D+ +E K+ + T ++ + + ++ PGK S
Sbjct: 459 EKNAKGNQTSNTDLTGSESKKQPLQTRTFGNGMIIEEIEMGKPDGKKASPGKKVS 513
>03_05_0520 + 25139314-25139364,25139580-25139711,25141594-25141731,
25143191-25143241,25143662-25143751,25143854-25144000,
25144108-25144218,25144307-25144375,25144777-25145517,
25145840-25146004,25146376-25146442,25146580-25146704,
25148714-25148983,25149065-25149199,25149316-25149497,
25149669-25149744
Length = 849
Score = 33.9 bits (74), Expect = 0.84
Identities = 41/156 (26%), Positives = 65/156 (41%), Gaps = 13/156 (8%)
Query: 994 PQNAPSNFIPTANTQPQYSQDTNL-FPSGDRSHDVTNLLNQSPAAVEIVQSQTLPYSSAK 1052
P+N P+ AN+ D N+ FPS S VT + + SQ L SA
Sbjct: 353 PENIPAVTSAPANSSSTLKDDDNMSFPSRRSSPAVTEI-GLGRGITRGLTSQGL--GSAP 409
Query: 1053 LQIG--SSDQSTQTFNQETLANLLSGDNRI-SAHLQDKIIGTIKHPLESDKLVTYEKDQS 1109
+ IG S + S + N+L+ D RI S + ++I + + + + V D
Sbjct: 410 ISIGPVSGNGSVSALTDLSKRNMLNTDERINSGGISQQLISPLGNKAQPQQ-VLRTTDTI 468
Query: 1110 YYFTSNLNNNTPGPNFSGNLIQP--TSNLETKPSNT 1143
+SN N +T G + P S ++ +P NT
Sbjct: 469 SSDSSNTNESTV---LGGRIFSPPVVSGVQWRPQNT 501
>12_01_1069 -
11060045-11060262,11060404-11060545,11060624-11060776,
11060942-11061013,11062774-11063082,11063323-11063378,
11066436-11066533,11066616-11066700,11066800-11067001,
11067471-11067542,11069555-11069624,11071829-11072038,
11072337-11072609,11073912-11074183,11075354-11075557
Length = 811
Score = 33.5 bits (73), Expect = 1.1
Identities = 16/57 (28%), Positives = 32/57 (56%), Gaps = 4/57 (7%)
Query: 314 TSRRQRGRQRSLNTDNKKSTNLSESKKLTNTDSVTNQKYTSNQQETQT----ISNQK 366
T+ +++G++ ++ NKKS+++S ++T TD+ N N + + SNQK
Sbjct: 522 TTSKKKGQKWGMDNSNKKSSDISYHGRITGTDTEVNHHVAGNSKTSDNDFGLASNQK 578
>11_06_0388 +
23048576-23051546,23051830-23052371,23052444-23052517,
23053006-23053090,23053281-23053367,23053585-23053657,
23053882-23053925,23054041-23054169,23054301-23054402,
23054529-23054585
Length = 1387
Score = 33.1 bits (72), Expect = 1.5
Identities = 27/136 (19%), Positives = 65/136 (47%), Gaps = 9/136 (6%)
Query: 353 TSNQQETQTISNQKANIRFNNGISDDIQNEVKQNIVSTLDTAASTVVTKTVPFRKTIEQT 412
+SN T I+++ + + IS+ I+ + ++ I +DT + ++++ + + +
Sbjct: 309 SSNDPGTDKITSEPIDTQSEKIISEPIETQSEKIISEPIDTQSEKIISEPIETQSEKIIS 368
Query: 413 KPGKAKSRIVIKTWLVKPTKFAKLIASP----TPYTYNKPTQSINDNLLDNSTPYEYEHS 468
+P A+S +I + ++ K+I+ P T + P ++ ++ ++ + E
Sbjct: 369 EPIDAQSEKIISEPIEAQSE--KIISEPIDTQTEKIISDPIEAQSEKIISEPIDAQTEKI 426
Query: 469 TKEPL---TESTISEP 481
EP+ +E ISEP
Sbjct: 427 ISEPIEAQSEKIISEP 442
>10_08_0643 +
19541991-19542188,19543261-19543515,19543598-19543722,
19543815-19543859,19544618-19544699,19545099-19545167,
19545276-19545446,19545530-19545595,19546236-19546273,
19547478-19547759,19548286-19548419,19548887-19548981,
19549083-19549127,19549250-19549309,19549483-19549584,
19549852-19549903,19549982-19550034,19550138-19550202,
19550579-19550630,19550780-19550857
Length = 688
Score = 33.1 bits (72), Expect = 1.5
Identities = 23/128 (17%), Positives = 54/128 (42%), Gaps = 1/128 (0%)
Query: 261 NTISNIHAGQFNQLKTKSNDATNTRPQRPTKDIQKNSQYFTKQTTTLSPNIQNTSRRQRG 320
N + I + +++++ + +T Q P +++ KQ T+ +P + +
Sbjct: 377 NVDTKIMPNGYENARSENSSSPSTSKQDPESKYWRSTSG-QKQQTSGTPAVHSGGVNSST 435
Query: 321 RQRSLNTDNKKSTNLSESKKLTNTDSVTNQKYTSNQQETQTISNQKANIRFNNGISDDIQ 380
++ + + L+ K T T TN + + ++ A IR + G D +
Sbjct: 436 TEKGHGVERDATVQLASDKLRTETRRATNLSGPLSLPTRASANSLSAPIRSSGGYVDSLG 495
Query: 381 NEVKQNIV 388
++ K+N+V
Sbjct: 496 DKSKRNVV 503
>03_01_0448 - 3444608-3444814,3446419-3446497,3446567-3446691,
3446765-3446809,3447070-3447165,3447344-3447417,
3447526-3447649,3447975-3448109,3448206-3448535,
3448610-3448762,3448840-3449391,3449569-3449648,
3450395-3450506,3450579-3450749,3450820-3450879
Length = 780
Score = 33.1 bits (72), Expect = 1.5
Identities = 25/87 (28%), Positives = 45/87 (51%), Gaps = 10/87 (11%)
Query: 1057 SSDQSTQTF-NQETLANLLSGDNRISAHLQDKIIGTIKHPLESDKLVTYEKDQSYYFTSN 1115
+ D++T+T N +T+A L G + L+DKI TI + L+S+K E +T
Sbjct: 553 TGDEATETDDNNKTIAERLRGSANLGLTLKDKI--TINYILQSEKTKVIEA-----YTEL 605
Query: 1116 LNNNTPG--PNFSGNLIQPTSNLETKP 1140
+N+N G + LI+ + ++ +P
Sbjct: 606 INDNQQGHTRQYGSALIEKETQVQMQP 632
>01_01_0172 +
1485170-1485176,1485480-1485511,1485622-1485870,
1486350-1487813,1487906-1487959
Length = 601
Score = 33.1 bits (72), Expect = 1.5
Identities = 32/147 (21%), Positives = 63/147 (42%), Gaps = 9/147 (6%)
Query: 695 KSSNIVTLPSNKLEPPLITNNVLNKNSTQDLPYFQESFLPPANTIERTVTIRITLPEKVA 754
K + P+ L+PP N+ + + ++PY + LPP V P +
Sbjct: 396 KVMKFIVQPNGPLDPP--DNSTVPDH---EVPYASVTALPPTTMTRYIVMYEYLTPTGQS 450
Query: 755 SYLFKNSNKTDFDKLEILNTGNSD-YLVLSNDFRTNPNFVTTGKLNAHQNRNISNSQALV 813
++L+ N + + E +G ++ + V++ +P + G A + + + N QA
Sbjct: 451 THLYINGLRLEDPVTETPKSGTTELWQVINLTGDNHPLHIHLGMFQAVKMQQLVNLQA-- 508
Query: 814 FSLLADSINAAKEYTNIAQQEVIPATP 840
F+ ++N A + N+ Q V P P
Sbjct: 509 FTDCMTAVNDAVK-CNVDQHAVGPVVP 534
>07_01_0566 +
4207894-4207974,4208090-4208144,4208671-4208759,
4209742-4209794,4209966-4210120,4210201-4210528,
4210618-4210730,4211394-4211538,4211951-4212259,
4212340-4212420,4212989-4213349
Length = 589
Score = 32.7 bits (71), Expect = 2.0
Identities = 31/144 (21%), Positives = 66/144 (45%), Gaps = 6/144 (4%)
Query: 226 TVRPSTREAEIFQRQRQTTPRYSNKLREEPNLRFGNTISNIHAGQFNQLKTKSNDATNTR 285
T +P T + + +R+ ++ YS+ + + G+ + + + + S+D + R
Sbjct: 163 TQKPPTHDKQKKKRKHYSSDSYSSDYSDTQSSDSGSESESYSSSSLDT--SSSSDHRHKR 220
Query: 286 PQRPTKDIQKNSQYFTKQTTTLSPNIQNTSRRQRGRQRSLNTDNKKS-TNLSESKKLTNT 344
+ KD ++++ +K T + + T R+ + RS + D+ S T S S +
Sbjct: 221 RKSSKKDKHRSAKGKSKHKKTKRKS-RGTKRKSKRSYRSSSDDSDSSKTGGSSSDSESEG 279
Query: 345 DSVTNQKYTSNQQ--ETQTISNQK 366
T K++S + T+TIS +K
Sbjct: 280 RRTTRTKHSSKKDPDNTKTISLEK 303
>03_06_0140 +
31951569-31951710,31951943-31952037,31952141-31953982,
31954065-31954179,31954260-31954897
Length = 943
Score = 32.3 bits (70), Expect = 2.6
Identities = 32/160 (20%), Positives = 64/160 (40%), Gaps = 3/160 (1%)
Query: 228 RPSTREAEIFQRQRQTTPRYSNKLREEPNLRFGNTISNIHAGQFNQLKTKSNDATNTRPQ 287
R T E I Q + T + + +++ + S I +FN+ + + N
Sbjct: 496 RQVTEEKHIIQEESTTGKKQTTSMKQLLGTDSEDK-SKITRVKFNKENLATTEIKNAARG 554
Query: 288 RPTKDIQKNSQYFTKQTTTLS-PNIQNTSRRQRGRQRSLNTDNKKSTNLSESKKLTNTDS 346
+ K Q+ Q + KQT S P R + ++ N ++K+ST SE+ +L
Sbjct: 555 KNGKTDQRKRQSYNKQTDVHSMPKKSQKYREMKSKEGIQNLEHKRSTK-SEATQLKILPY 613
Query: 347 VTNQKYTSNQQETQTISNQKANIRFNNGISDDIQNEVKQN 386
+ + + E + ++ + GIS+ V+ +
Sbjct: 614 TAEIQQENGKHEEDNDIVKPSDSHGDGGISEQFAGMVEDS 653
>03_03_0016 -
13761007-13761489,13761929-13762096,13763086-13763130,
13763380-13763447,13763532-13763586,13763659-13763814,
13763904-13764002,13764792-13764872,13765513-13765636,
13765938-13766032,13766434-13766560,13766768-13766871,
13767278-13767359,13768012-13768049
Length = 574
Score = 32.3 bits (70), Expect = 2.6
Identities = 22/76 (28%), Positives = 31/76 (40%), Gaps = 1/76 (1%)
Query: 280 DATNTRPQRPTKDIQKNSQYFTKQTTTLSPNIQNTSRRQRGRQRSLNTDNKKSTNLSESK 339
DA++T RPT T T SP +Q+ S S+NT + +N S
Sbjct: 463 DASSTSA-RPTPTDAPGKDVTTCSTKAKSPEVQSASNHTTNNAASVNTSSSLESNASTHV 521
Query: 340 KLTNTDSVTNQKYTSN 355
+ S +QK T N
Sbjct: 522 TNGKSTSSESQKPTQN 537
>11_06_0638 -
25719109-25719334,25719485-25719510,25719974-25720058,
25720189-25720320,25720615-25720673,25720742-25721048,
25721572-25721653,25721730-25721863,25721948-25722041,
25722112-25722235,25722497-25722556
Length = 442
Score = 31.9 bits (69), Expect = 3.4
Identities = 22/83 (26%), Positives = 39/83 (46%), Gaps = 3/83 (3%)
Query: 293 IQKNSQYFTKQTTTLSPNIQNTSRRQRGRQRSLNTDNKKSTNLSESKKLTNTDSV-TNQK 351
++K+ + T+ + P ++NT + + L TD +T S + NT V TNQ
Sbjct: 242 LKKSYPVENENTSLMLPTLENTKVAKESATKQLATDEGLTTMEHCSPAIANTIQVATNQL 301
Query: 352 YTSNQQETQTISNQKANIRFNNG 374
Y S Q+ I ++ + F+ G
Sbjct: 302 YHS--QQVDLIKEKQPSTEFSPG 322
>09_06_0199 +
21526872-21527250,21527431-21527594,21527673-21527736,
21528001-21528134,21528302-21528385,21528526-21528600,
21528683-21528754,21528852-21528925,21529185-21529282,
21529355-21529464,21529794-21529862,21529944-21530018,
21530519-21530611,21530690-21530769,21530877-21530976,
21531150-21531586,21531676-21531706,21532873-21533822,
21533982-21534201
Length = 1102
Score = 31.9 bits (69), Expect = 3.4
Identities = 24/96 (25%), Positives = 43/96 (44%), Gaps = 5/96 (5%)
Query: 338 SKKLTNTDSVTNQKYTSNQQETQTISNQKANIRFNNGISD---DIQNEVKQNIVSTLDTA 394
+++ T D VT K ++ + +T+ N K + NG + NE K+ S
Sbjct: 606 NEETTILDGVTEDKQQTHDRPEKTLKNHKKGEKKRNGPGSGKKETHNE-KEEPTSEKKQP 664
Query: 395 ASTVVTKTVPFRKT-IEQTKPGKAKSRIVIKTWLVK 429
S + KTVP R + ++ KP + + W+V+
Sbjct: 665 VSAKIKKTVPKRTSGTKEKKPDTDQGGKRKRNWMVR 700
>05_01_0100 + 670297-670525,671344-671559,671653-671758,671890-672229,
672555-672839,672911-673033,673361-673435
Length = 457
Score = 31.9 bits (69), Expect = 3.4
Identities = 26/69 (37%), Positives = 33/69 (47%), Gaps = 7/69 (10%)
Query: 984 NTANFIHSNIPQNAPSNFIPTANTQPQYSQD--TNLFPSGDRS---HDVTNLLNQSPAAV 1038
N N + S P N P F P TQP SQ LF S DR HDVT++L++ +
Sbjct: 104 NLKNRLMSMCPSNYPMTFYPEI-TQPGPSQFYLLKLF-SADRKGLLHDVTHILSELELII 161
Query: 1039 EIVQSQTLP 1047
V+ T P
Sbjct: 162 HRVKVSTTP 170
>01_01_0078 +
587975-588179,588506-588606,589087-589167,589240-590178,
590388-590542,590837-590902,590963-591023,591659-591853,
591939-592049,592116-592280
Length = 692
Score = 31.9 bits (69), Expect = 3.4
Identities = 21/76 (27%), Positives = 32/76 (42%), Gaps = 3/76 (3%)
Query: 506 LKDALTSNPNPYSTIAEPLDLGPTIVLPTASSVIYLAPTTFKPAARFYLPPSNPIPSRQY 565
L L+S P S + PL P +S ++ PTT P++ L P P
Sbjct: 236 LNPTLSSGPQKLSELQPPLLQPPGTTQGPSSGIL---PTTTAPSSANLLSPETSKPLLPN 292
Query: 566 LSPIIQPPMYNSNAQL 581
+ P+ PP+ + A L
Sbjct: 293 MGPLFTPPVPSVGATL 308
>06_01_0039 - 386576-387098,387173-387468,387744-388067,388165-388276,
388355-388482,388914-389048,389122-389250,389620-389787,
389897-390019,390099-390227,390543-390866,390946-392901
Length = 1448
Score = 31.5 bits (68), Expect = 4.5
Identities = 21/117 (17%), Positives = 52/117 (44%), Gaps = 2/117 (1%)
Query: 265 NIHAGQFNQLKTKSNDATNTRPQRPTKDIQKNSQYFTKQTTTLSPNIQ-NTSRRQRGRQR 323
N+H Q + + + P + +Q N Q + ++P+ N S R R
Sbjct: 1327 NVHQDQPSSTIALRESSASPPPSVQSIPVQSNIQRYPSMDNIMTPSGSGNGSSFSRSRAA 1386
Query: 324 SLN-TDNKKSTNLSESKKLTNTDSVTNQKYTSNQQETQTISNQKANIRFNNGISDDI 379
S + +++ + + S+ ++ Q+++ + S+ ++++FNNG+ +D+
Sbjct: 1387 SWSGAYSEQLSGNAVSRSPDGQRTMMQSPLIPGQKQSHSRSSSNSSLQFNNGLGEDL 1443
>05_01_0573 -
5083030-5083151,5084639-5084738,5084790-5084829,
5085122-5085567
Length = 235
Score = 31.5 bits (68), Expect = 4.5
Identities = 14/23 (60%), Positives = 16/23 (69%)
Query: 544 TTFKPAARFYLPPSNPIPSRQYL 566
TT KP++R LPP NP S QYL
Sbjct: 90 TTQKPSSRRVLPPPNPSSSSQYL 112
>02_05_0072 -
25598690-25598702,25598820-25599001,25599111-25599269,
25599450-25599753,25600176-25600332,25600439-25600484
Length = 286
Score = 31.5 bits (68), Expect = 4.5
Identities = 45/203 (22%), Positives = 76/203 (37%), Gaps = 10/203 (4%)
Query: 168 YKAPAGQLFPNEALLAGPERLPSNVYVPKQNLIQNTY--SNNENFYSESTSQPNYPNQYT 225
+K+ A L EA GP+R+ K Y SN+ F + +T + + +
Sbjct: 34 WKSHAAPLSAQEAP-KGPKRMTKQERRVKIEKFVEEYKASNDGKFPTMTTVRQHVGGGHY 92
Query: 226 TVRPSTREAEIFQRQRQTTPRYSNKLREEPNLRFGNTISNIHA-GQFNQLKTKSNDATNT 284
TVR +E E QR Q + +L E ++H QFN N T+
Sbjct: 93 TVREIVQELEYNQRMLQLDQSKAAELPETAEHSEHLKPKDVHGNAQFNSESFSGNQNTDD 152
Query: 285 R------PQRPTKDIQKNSQYFTKQTTTLSPNIQNTSRRQRGRQRSLNTDNKKSTNLSES 338
T+ I K + +++ S T + +Q D+ + N S
Sbjct: 153 LHLSQKVAATSTEIIDKTETWRLEESQMTSGTSHYTGETEAVKQDLHTADSLQGANESIK 212
Query: 339 KKLTNTDSVTNQKYTSNQQETQT 361
T +DS+ N+ S +T++
Sbjct: 213 SCQTESDSIKNEDSISLGLDTKS 235
>09_02_0121 +
4502628-4502696,4503727-4503829,4504205-4504328,
4505963-4506306,4506383-4506487,4507907-4508288,
4509173-4509437,4509936-4510094,4511150-4511201,
4511266-4511462,4512865-4513350,4513797-4514093
Length = 860
Score = 31.1 bits (67), Expect = 6.0
Identities = 18/59 (30%), Positives = 23/59 (38%)
Query: 173 GQLFPNEALLAGPERLPSNVYVPKQNLIQNTYSNNENFYSESTSQPNYPNQYTTVRPST 231
G P A +A P + P+N Y P N T+ N Y S P+ T V T
Sbjct: 681 GMYPPVSAAVAPPGKYPTNTYKPGANNGTQTHVGNHGAYGTYDSSPSIYTNNTMVASGT 739
>04_03_0495 + 16545795-16546029,16546125-16546360,16546863-16547144
Length = 250
Score = 31.1 bits (67), Expect = 6.0
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Query: 339 KKLTNTDSVTNQKYTSNQQETQTISNQKANIRFNNGISDDIQNEVKQNIVSTLDTAASTV 398
K L D +T Q+ NQ ET + S +K N N+ +D +N++++ S +
Sbjct: 66 KDLKTKDDITIQQSARNQHETPSFSTRKCN--KNSRFGEDCKNQLQEIPCSIKGSRKKGR 123
Query: 399 VTKTVPFRKTIEQTKP 414
TK K+I + P
Sbjct: 124 ETKRPKKSKSIYEIGP 139
>11_06_0678 +
26166476-26166660,26166753-26166807,26166925-26167040,
26167535-26167604,26167795-26167844,26168160-26168439,
26170057-26170333,26170491-26170591
Length = 377
Score = 30.7 bits (66), Expect = 7.9
Identities = 36/139 (25%), Positives = 59/139 (42%), Gaps = 8/139 (5%)
Query: 287 QRPTKDIQKNSQYFTKQTTTLSPNIQNTSRRQRGRQRSLNTDNKKSTNLSESKKLTNTDS 346
Q+ I + Q+ TKQT TLS I S + G+ + L N+ + S+ +
Sbjct: 111 QKHLNPIYCSLQHLTKQTGTLSERIDTVS-HEVGQIKKL-ISNRDANERYRSEVNQENAA 168
Query: 347 VTNQKYTSNQQETQTISNQKANIRFNNGISDDIQNEVKQNIVSTLD--TAASTVVTKTVP 404
VT + NQ++T + + + G+ N++K ++V T D TA K
Sbjct: 169 VTEE---VNQEQT-ALRFAANEVHEDQGVELRFLNKLKDHLVYTNDKITAEDGTAIKIAI 224
Query: 405 FRKTIEQTKPGKAKSRIVI 423
FR T + +RI I
Sbjct: 225 FRDNKIVTAGQLSSARIEI 243
>11_02_0123 -
8550193-8550213,8550434-8550682,8550787-8550834,
8550939-8551025,8551104-8551184,8551264-8551368,
8551464-8551556,8551635-8551715,8551794-8551895,
8552144-8552224,8552304-8552405,8552499-8552834,
8552920-8553006,8553275-8553493,8553575-8553769
Length = 628
Score = 30.7 bits (66), Expect = 7.9
Identities = 36/155 (23%), Positives = 62/155 (40%), Gaps = 15/155 (9%)
Query: 252 REEPNLRFGNTISNIHAGQFNQLKTKSNDATNTRPQRPTKDIQKNSQYFTKQTTTLSPNI 311
R +P+L + I+ + F Q+ S + + P+ ++ S Y + + N
Sbjct: 327 RGKPSLPHEHMITKVDI--FEQVDNDSTNGFDHNPENLDANVNATSNYVQQVCSVKCTNA 384
Query: 312 Q----NTS---RRQRGRQRSLN--TDNKKSTNLSESKKLTNTDSVTNQKYTSNQQETQTI 362
+ N S R +Q SL K++ + L + VTN+ Y+ Q I
Sbjct: 385 KDRRGNPSIPYERTNAKQLSLEKLAQRTKTSQRNAESSLVTHEHVTNEGYSFGQDSRNDI 444
Query: 363 SNQKANIRFNNGISDDIQNEVKQNIVSTLDTAAST 397
+N N N S +N + QN V L + +ST
Sbjct: 445 TNGSVN---NFEDSHTNRNAI-QNNVQRLQSVSST 475
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.311 0.127 0.361
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,653,029
Number of Sequences: 37544
Number of extensions: 1480510
Number of successful extensions: 2880
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 2870
Number of HSP's gapped (non-prelim): 28
length of query: 1276
length of database: 14,793,348
effective HSP length: 91
effective length of query: 1185
effective length of database: 11,376,844
effective search space: 13481560140
effective search space used: 13481560140
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 66 (30.7 bits)
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