Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001856-TA|BGIBMGA001856-PA|IPR002018|Carboxylesterase,
type B
(360 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_06_0025 + 20308160-20308162,20308194-20308262,20308602-20309213 33 0.27
09_02_0022 + 3065644-3065953,3066048-3067162,3067261-3067437,306... 32 0.82
09_06_0325 + 22347286-22347574,22347770-22348054,22348508-223485... 31 1.9
02_05_0525 + 29764176-29764518,29765351-29765679 31 1.9
02_03_0212 - 16460665-16460766,16460971-16461298,16461379-164615... 30 3.3
02_02_0061 + 6468190-6471046,6471318-6471736 29 5.8
07_01_1023 + 8840754-8842988,8843189-8843362 29 7.6
06_01_0545 + 3892664-3892888,3892914-3893173,3893393-3893717,389... 29 7.6
04_03_0811 - 19909128-19912214 29 7.6
03_06_0239 - 32578231-32578353,32578431-32578655,32579081-325792... 29 7.6
>09_06_0025 + 20308160-20308162,20308194-20308262,20308602-20309213
Length = 227
Score = 33.5 bits (73), Expect = 0.27
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Query: 187 EYGSK-RYQEIRQRIMDFYFANGTIGERSLRRYAKYVSDQAIYPVIRQARSH 237
EY S+ R Q IR+ ++D GT R RR+A V P+ R + SH
Sbjct: 51 EYSSQIRNQAIRKNLVDELVPPGTSARREARRFATLVRSHRRTPLARPSHSH 102
>09_02_0022 +
3065644-3065953,3066048-3067162,3067261-3067437,
3067535-3067648,3068614-3068718,3068930-3069064,
3069148-3069203,3069277-3069382,3069515-3069631,
3069705-3069831,3069915-3070141,3070164-3070727
Length = 1050
Score = 31.9 bits (69), Expect = 0.82
Identities = 31/129 (24%), Positives = 53/129 (41%), Gaps = 3/129 (2%)
Query: 16 HERSYCHGPDFFIDENIIVVTVSFRTGIFGYLNTGDGFALGNMGAKDMLTAIKWVKSNIK 75
H +C P+ NI T+ R+ F T A + G K + T + +K
Sbjct: 95 HSVKFCSFPEGVFQSNIARFTLPIRSLAFNKKGTLLAAAGDDDGIKLIATIDNTISKVLK 154
Query: 76 NFKGDVDKITVIGSGEAAASVATFPLTSAAGNLFSRIIVESGSALSPENYRNYNFEISNK 135
KG V ++ + AS+ TF T +L + S ++P +++ I+N
Sbjct: 155 GHKGSVTGLSFDPRNDYLASIDTFG-TVIFWDLCTGTEARSLKRIAPTFGSDHS--INNA 211
Query: 136 LYWNLNGPF 144
L W+ +G F
Sbjct: 212 LCWSPDGQF 220
>09_06_0325 +
22347286-22347574,22347770-22348054,22348508-22348592,
22348686-22348802,22349270-22349334,22349456-22349544,
22349642-22349721,22349797-22349908,22349990-22350109,
22350234-22350416
Length = 474
Score = 30.7 bits (66), Expect = 1.9
Identities = 21/75 (28%), Positives = 32/75 (42%), Gaps = 4/75 (5%)
Query: 287 ANRLYRSEVSSERRDPTPEGSDEILGDLKWTP----MVDLNNIKGLNLNRKIKMIELPEM 342
A LY ++ RR+ PE +EI G KW P M +N +RK + +M
Sbjct: 195 AEDLYGLFINRVRRERPPELLEEIKGLTKWVPPPVKMTRSYVEDNINRSRKRMDVSALDM 254
Query: 343 RRVRFWDQLKSEYFE 357
+ +WD Y +
Sbjct: 255 LQFHWWDYANPGYLD 269
>02_05_0525 + 29764176-29764518,29765351-29765679
Length = 223
Score = 30.7 bits (66), Expect = 1.9
Identities = 13/33 (39%), Positives = 21/33 (63%)
Query: 58 MGAKDMLTAIKWVKSNIKNFKGDVDKITVIGSG 90
MG KD T++K +++ +KN G VD + G+G
Sbjct: 165 MGTKDGFTSVKQLQNKLKNAAGRVDTHLIEGAG 197
>02_03_0212 -
16460665-16460766,16460971-16461298,16461379-16461502,
16461576-16461825,16462185-16462265,16463030-16463114,
16463200-16463321,16463865-16464672,16464775-16465027,
16465998-16466796
Length = 983
Score = 29.9 bits (64), Expect = 3.3
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Query: 52 GFALGNMGAKDM--LTAIKWVKSNIKNFKGDVDKITV-IGSGEA 92
G++ +G++ M L WV++++K F GD+D V G G A
Sbjct: 642 GYSFERVGSRQMAGLLICVWVRTHLKQFIGDIDNAAVACGLGRA 685
>02_02_0061 + 6468190-6471046,6471318-6471736
Length = 1091
Score = 29.1 bits (62), Expect = 5.8
Identities = 26/85 (30%), Positives = 33/85 (38%), Gaps = 5/85 (5%)
Query: 130 FEISNKLYWNLNGPFKKLNRTNLYQILANSTTNELLLASGALFDSTEYLV----PFEGKI 185
FE SNK W+ + L + N T EL + G L EY V GKI
Sbjct: 390 FETSNKYGWSFMSSLTNCSNLRLLDVGDNKLTGELPNSIGNLSTRLEYFVTNYNSMTGKI 449
Query: 186 DEYGSKRYQEIRQRIMDFYFANGTI 210
E G ++ M+ F GTI
Sbjct: 450 PE-GLGNLVSLKFIEMNNNFYEGTI 473
>07_01_1023 + 8840754-8842988,8843189-8843362
Length = 802
Score = 28.7 bits (61), Expect = 7.6
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
Query: 141 NGPFKKLNRTNLYQILANSTTNELLLASGALFDSTEYLVPFEGKI---DEYGSKRYQEIR 197
N P KKL+ T ++ A T+E+ +A+ + ST + E I + K+YQE
Sbjct: 550 NNPQKKLSTTAVHAAPARKNTSEIKMANSEMKPSTSFGQAAEQGINLANLKAIKQYQEFE 609
Query: 198 QRI 200
+++
Sbjct: 610 EKV 612
>06_01_0545 +
3892664-3892888,3892914-3893173,3893393-3893717,
3893838-3893999,3894192-3894272
Length = 350
Score = 28.7 bits (61), Expect = 7.6
Identities = 26/118 (22%), Positives = 56/118 (47%), Gaps = 7/118 (5%)
Query: 106 GNLFSRIIVES--GSALSPENYRNYNFEIS-NKLYWNLNGPFKKLN----RTNLYQILAN 158
G+LF+ ++V+ G + + YN +++ N L NL + L R+ +++++ N
Sbjct: 228 GSLFTILLVDEDVGGLQIQRDGKWYNVQVTPNTLLINLGDTMEVLCNGIFRSPVHRVVTN 287
Query: 159 STTNELLLASGALFDSTEYLVPFEGKIDEYGSKRYQEIRQRIMDFYFANGTIGERSLR 216
+ + LA + + + P G +DE RY++ + + ++ I ER+ R
Sbjct: 288 AERERISLAMFYSVNDEKDIGPAAGLLDENRPARYRKATLNLFNKLISSYHIKERNQR 345
>04_03_0811 - 19909128-19912214
Length = 1028
Score = 28.7 bits (61), Expect = 7.6
Identities = 17/32 (53%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Query: 216 RRY-AKYVSDQAIYPVIRQARSHSEKSGNNVY 246
RRY AK S AI P IRQ + H E S N Y
Sbjct: 754 RRYMAKEFSVVAIAPPIRQTKRHVEMSATNRY 785
>03_06_0239 -
32578231-32578353,32578431-32578655,32579081-32579248,
32579331-32579446,32579540-32579692,32579779-32579922,
32580775-32581576
Length = 576
Score = 28.7 bits (61), Expect = 7.6
Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 5/70 (7%)
Query: 49 TGDGFALGNMGAKDMLTA--IKWVKSNIK---NFKGDVDKITVIGSGEAAASVATFPLTS 103
TG FA ++ + +LT ++ V+ I+ + G + ++++G+ E A +V
Sbjct: 135 TGREFACKSIAKRKLLTQEDVEDVRREIQIMHHLAGHANVVSIVGAYEDAVAVQLVMELC 194
Query: 104 AAGNLFSRII 113
A G LF RII
Sbjct: 195 AGGELFDRII 204
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.320 0.138 0.411
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,593,163
Number of Sequences: 37544
Number of extensions: 455618
Number of successful extensions: 945
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 940
Number of HSP's gapped (non-prelim): 12
length of query: 360
length of database: 14,793,348
effective HSP length: 83
effective length of query: 277
effective length of database: 11,677,196
effective search space: 3234583292
effective search space used: 3234583292
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 61 (28.7 bits)
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