Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001856-TA|BGIBMGA001856-PA|IPR002018|Carboxylesterase,
type B
(360 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_9981| Best HMM Match : No HMM Matches (HMM E-Value=.) 91 2e-18
SB_56597| Best HMM Match : COesterase (HMM E-Value=0) 89 5e-18
SB_23484| Best HMM Match : COesterase (HMM E-Value=0) 89 7e-18
SB_38136| Best HMM Match : COesterase (HMM E-Value=0) 81 1e-15
SB_28537| Best HMM Match : No HMM Matches (HMM E-Value=.) 81 1e-15
SB_53892| Best HMM Match : No HMM Matches (HMM E-Value=.) 80 2e-15
SB_33198| Best HMM Match : 7tm_1 (HMM E-Value=9.80909e-45) 76 5e-14
SB_56819| Best HMM Match : COesterase (HMM E-Value=0) 72 8e-13
SB_30325| Best HMM Match : No HMM Matches (HMM E-Value=.) 70 3e-12
SB_24363| Best HMM Match : COesterase (HMM E-Value=1.7e-16) 63 4e-10
SB_37257| Best HMM Match : No HMM Matches (HMM E-Value=.) 59 6e-09
SB_8608| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 1e-08
SB_58527| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 3e-08
SB_43484| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 1e-07
SB_53891| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 2e-07
SB_10885| Best HMM Match : COesterase (HMM E-Value=1.4) 52 7e-07
SB_8609| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_11960| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.039
SB_11959| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.051
SB_40548| Best HMM Match : COesterase (HMM E-Value=3e-21) 34 0.21
SB_19573| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.21
SB_2845| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.63
SB_57724| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 31 1.1
SB_22840| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 31 1.1
SB_48268| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.9
SB_38133| Best HMM Match : TolA (HMM E-Value=0.38) 29 4.4
SB_28868| Best HMM Match : WSC (HMM E-Value=0.026) 29 7.7
>SB_9981| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 780
Score = 90.6 bits (215), Expect = 2e-18
Identities = 47/122 (38%), Positives = 70/122 (57%), Gaps = 8/122 (6%)
Query: 9 FPVIIWIHERSYCHGP--------DFFIDENIIVVTVSFRTGIFGYLNTGDGFALGNMGA 60
+PV+ +IH SY G + I++VT+ +R G+ G+L TGD A GN G
Sbjct: 208 YPVLFYIHGGSYYLGTPNRVKTPGEIAPQYGIVLVTIHYRLGVLGFLTTGDVEAPGNAGM 267
Query: 61 KDMLTAIKWVKSNIKNFKGDVDKITVIGSGEAAASVATFPLTSAAGNLFSRIIVESGSAL 120
D + A++WVK NI F GD ++IT++G+ A+SV L+ LF + I+ESG+ L
Sbjct: 268 LDQIQALRWVKENIAGFGGDPNQITLVGNSAGASSVGLHLLSPLTKGLFQKAIMESGTEL 327
Query: 121 SP 122
SP
Sbjct: 328 SP 329
>SB_56597| Best HMM Match : COesterase (HMM E-Value=0)
Length = 505
Score = 89.0 bits (211), Expect = 5e-18
Identities = 45/120 (37%), Positives = 66/120 (55%), Gaps = 7/120 (5%)
Query: 10 PVIIWIHERSYCHGPDFFID-------ENIIVVTVSFRTGIFGYLNTGDGFALGNMGAKD 62
PV++WIH Y H + D N+IVVT+++R + G+L+ GN G D
Sbjct: 62 PVMVWIHGGGYYHATANWFDGSVLASHNNVIVVTINYRLALLGFLHIPGTQLRGNYGMLD 121
Query: 63 MLTAIKWVKSNIKNFKGDVDKITVIGSGEAAASVATFPLTSAAGNLFSRIIVESGSALSP 122
+ A+KWV+ NI +F G+ +T+ G AASV L+ + LF I+ESGSA+SP
Sbjct: 122 QVQALKWVQQNIASFGGNPSHVTLFGESSGAASVTLHILSPLSAGLFQTAIIESGSAVSP 181
>SB_23484| Best HMM Match : COesterase (HMM E-Value=0)
Length = 586
Score = 88.6 bits (210), Expect = 7e-18
Identities = 49/126 (38%), Positives = 68/126 (53%), Gaps = 8/126 (6%)
Query: 5 NATGFPVIIWIHERSYCHG-------PDFFID-ENIIVVTVSFRTGIFGYLNTGDGFALG 56
+ T +PVI +IH + G P F+ I++VTV +R GIFG+L TGD A G
Sbjct: 130 DGTHYPVIFYIHGGGFFAGTPIRDVTPGEFLPLRGIVLVTVQYRLGIFGFLTTGDAEAPG 189
Query: 57 NMGAKDMLTAIKWVKSNIKNFKGDVDKITVIGSGEAAASVATFPLTSAAGNLFSRIIVES 116
N G D + A++W K NI NF G+ + IT++G ASV ++ + LF R I S
Sbjct: 190 NAGLLDQVEALQWTKRNIFNFGGEPNNITIMGESAGGASVGLHLMSPLSKGLFQRAIAVS 249
Query: 117 GSALSP 122
G SP
Sbjct: 250 GVEFSP 255
>SB_38136| Best HMM Match : COesterase (HMM E-Value=0)
Length = 590
Score = 81.4 bits (192), Expect = 1e-15
Identities = 42/127 (33%), Positives = 65/127 (51%), Gaps = 6/127 (4%)
Query: 2 PLTNATGFPVIIWIHERSYCHGPDFFIDEN------IIVVTVSFRTGIFGYLNTGDGFAL 55
P + T + V+++IH Y G + +++VT+ +R G FG+++TGD A
Sbjct: 125 PNSTGTKYAVMVYIHGGGYEAGSPIISPGDAIPLWGVVLVTIQYRLGPFGFMSTGDSVAP 184
Query: 56 GNMGAKDMLTAIKWVKSNIKNFKGDVDKITVIGSGEAAASVATFPLTSAAGNLFSRIIVE 115
GN G D + A+KWV+ NI F GD ++T+ G +SV L+ + LF I
Sbjct: 185 GNYGMLDQIAALKWVQENIAAFHGDPSRVTIFGESAGGSSVGLLLLSPLSKGLFHYAIAL 244
Query: 116 SGSALSP 122
SG SP
Sbjct: 245 SGVDFSP 251
>SB_28537| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 621
Score = 81.4 bits (192), Expect = 1e-15
Identities = 42/121 (34%), Positives = 68/121 (56%), Gaps = 7/121 (5%)
Query: 9 FPVIIWIHERSYCHGPDF------FIDENIIVVTVSFRTGIFGYLNTGDGFAL-GNMGAK 61
+PV+++I + Y G + ++VV++ +R G FG+L + G ++ GN G
Sbjct: 155 YPVMVYIPGQDYSSGTSLDSLGHALALKEVVVVSIQYRLGPFGFLTSEKGESVQGNQGLL 214
Query: 62 DMLTAIKWVKSNIKNFKGDVDKITVIGSGEAAASVATFPLTSAAGNLFSRIIVESGSALS 121
D + A+KWVK NI+NF GD ++T+ G G +SVA ++ + LF I SG+AL
Sbjct: 215 DQVQALKWVKENIENFNGDPSQVTIFGHGAGGSSVALHIISPLSKGLFHNAISMSGAALV 274
Query: 122 P 122
P
Sbjct: 275 P 275
>SB_53892| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 353
Score = 80.2 bits (189), Expect = 2e-15
Identities = 45/118 (38%), Positives = 64/118 (54%), Gaps = 8/118 (6%)
Query: 11 VIIWIHERSYCHGPDFFID-------ENIIVVTVSFRTGIFGYLNTGDGFALGNMGAKDM 63
V++WI Y +G +D E +IVVT++ R G+ GYL GD F GN G D
Sbjct: 128 VVVWIAGLFYSYGNAVEMDGRFLASNEEVIVVTLNNRLGVLGYLKYGDVFR-GNYGVADQ 186
Query: 64 LTAIKWVKSNIKNFKGDVDKITVIGSGEAAASVATFPLTSAAGNLFSRIIVESGSALS 121
+ A+KW+++NI+ F GD +T++G A S + A LF R I+ SGS LS
Sbjct: 187 IMALKWIRANIERFGGDPRHVTLLGQSAGAMSAGLLLTSPQALGLFDRAILLSGSPLS 244
>SB_33198| Best HMM Match : 7tm_1 (HMM E-Value=9.80909e-45)
Length = 762
Score = 75.8 bits (178), Expect = 5e-14
Identities = 40/119 (33%), Positives = 62/119 (52%), Gaps = 7/119 (5%)
Query: 10 PVIIWIH-------ERSYCHGPDFFIDENIIVVTVSFRTGIFGYLNTGDGFALGNMGAKD 62
PV++W+H ++ H +IIVVT++ R +FG+L GN G D
Sbjct: 523 PVMVWLHGGGNYVGSGNWYHSSVLSSHNDIIVVTLNHRLALFGFLYISGTDLAGNYGYLD 582
Query: 63 MLTAIKWVKSNIKNFKGDVDKITVIGSGEAAASVATFPLTSAAGNLFSRIIVESGSALS 121
+ A+KWV NI NF GD + +T+ G ASV ++ + LF + I++SG+A S
Sbjct: 583 QVQALKWVHQNIGNFGGDPNSVTIFGESAGGASVHFHIMSPMSAGLFHKAIIQSGNANS 641
>SB_56819| Best HMM Match : COesterase (HMM E-Value=0)
Length = 613
Score = 71.7 bits (168), Expect = 8e-13
Identities = 41/121 (33%), Positives = 62/121 (51%), Gaps = 8/121 (6%)
Query: 4 TNAT-GFPVIIWIHERSYCHGPDFFID-------ENIIVVTVSFRTGIFGYLNTGDGFAL 55
T AT PV+++IH Y G D ++IVVT+++R G+ G+L+
Sbjct: 184 TKATKDLPVMVFIHGGGYYRGSGDVYDGTPLAAYNDVIVVTMNYRLGLLGFLHVAGTDVT 243
Query: 56 GNMGAKDMLTAIKWVKSNIKNFKGDVDKITVIGSGEAAASVATFPLTSAAGNLFSRIIVE 115
GN D + A+KWV+ +I F GD ++T+ G ASV L+ + LF R I+E
Sbjct: 244 GNYAMYDQILALKWVQQHIGCFGGDPSQVTLFGQSAGGASVLLLTLSPLSKGLFKRAILE 303
Query: 116 S 116
S
Sbjct: 304 S 304
>SB_30325| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 682
Score = 70.1 bits (164), Expect = 3e-12
Identities = 39/122 (31%), Positives = 67/122 (54%), Gaps = 9/122 (7%)
Query: 4 TNATGFPVIIWIHERSY----CHGPD---FFIDENIIVVTVSFRTGIFGYLNTGDGFALG 56
T + PV+++IH ++ H D ++ I+VVT+++R GI G+L +GD
Sbjct: 112 TRNSSLPVLVFIHGGAFMRFSAHEDDPSLLATEQGIMVVTINYRLGILGFLCSGD--IKE 169
Query: 57 NMGAKDMLTAIKWVKSNIKNFKGDVDKITVIGSGEAAASVATFPLTSAAGNLFSRIIVES 116
N+G D + A+KWV++NI+ F GD ++T+ G S + L+ A LF+ + S
Sbjct: 170 NLGLLDQIYALKWVQNNIERFGGDRSQVTIGGLSAGGESASILMLSPLATGLFTGVFAMS 229
Query: 117 GS 118
G+
Sbjct: 230 GT 231
>SB_24363| Best HMM Match : COesterase (HMM E-Value=1.7e-16)
Length = 635
Score = 62.9 bits (146), Expect = 4e-10
Identities = 30/95 (31%), Positives = 51/95 (53%), Gaps = 1/95 (1%)
Query: 29 DENIIVVTVSFRTGIFGYLNTGDGFALGNMGAKDMLTAIKWVKSNIKNFKGDVDKITVIG 88
++ ++VVT ++R G FG+L N+G +D +KWV NIK F G +T+ G
Sbjct: 381 NQKVVVVTFNYRLGAFGFLGNSKINISQNLGVEDAKAVLKWVNRNIKGFGGSAGMVTIAG 440
Query: 89 SGEAAASVATFPLTSA-AGNLFSRIIVESGSALSP 122
+ A A++ + L +L+ R+++ SGS P
Sbjct: 441 NSIAGATITSLLLADPDVQSLYKRVMLWSGSWYLP 475
>SB_37257| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 741
Score = 58.8 bits (136), Expect = 6e-09
Identities = 30/94 (31%), Positives = 50/94 (53%), Gaps = 7/94 (7%)
Query: 11 VIIWIHERSYCHG------PDFFIDEN-IIVVTVSFRTGIFGYLNTGDGFALGNMGAKDM 63
V+++IH + G P + N +IVVT+++R G+ G+ N D GN G D
Sbjct: 178 VMVFIHGGGFTSGASRDYDPSVLVALNDVIVVTINYRLGVLGFFNIPDTEYKGNYGLLDQ 237
Query: 64 LTAIKWVKSNIKNFKGDVDKITVIGSGEAAASVA 97
+ A++WV+ NI +F G+ +T+ G SV+
Sbjct: 238 VLALQWVQQNIASFGGNPKSVTIFGESAGGMSVS 271
>SB_8608| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 604
Score = 58.0 bits (134), Expect = 1e-08
Identities = 33/80 (41%), Positives = 47/80 (58%), Gaps = 11/80 (13%)
Query: 3 LTNATGFPVIIWIHERSYCHGPDFFID-------ENIIVVTVSFRTGIFGYLNTGDGFAL 55
+TN++ PV+++IH SY G F D N+IVV +R G+FGYL G+
Sbjct: 109 ITNSS-IPVMVFIHGGSYSFGGSRFYDGSALASVGNVIVVIAQYRLGMFGYLYNGN---K 164
Query: 56 GNMGAKDMLTAIKWVKSNIK 75
GN G D + A+KWV++NIK
Sbjct: 165 GNFGMLDQIMALKWVQNNIK 184
Score = 33.1 bits (72), Expect = 0.36
Identities = 13/45 (28%), Positives = 24/45 (53%)
Query: 77 FKGDVDKITVIGSGEAAASVATFPLTSAAGNLFSRIIVESGSALS 121
F G+ ++T+ G V+ L+ LF +I++SGSA++
Sbjct: 261 FGGNPQQVTIFGQSAGGGCVSLLMLSPLTNGLFKNVIIQSGSAVA 305
>SB_58527| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1659
Score = 56.4 bits (130), Expect = 3e-08
Identities = 36/125 (28%), Positives = 61/125 (48%), Gaps = 16/125 (12%)
Query: 10 PVIIWIH--ERSYCHG--------PDFFIDENIIVVTVSFRTGIFGYLNT---GDGF--- 53
PV+++IH E +Y G P+F + ++ ++ ++R FG+L+ DG
Sbjct: 1125 PVLVFIHGGELTYGSGHDSGIHPTPEFVSNLGVVGISFNYRLNAFGFLSLDALSDGSKSN 1184
Query: 54 ALGNMGAKDMLTAIKWVKSNIKNFKGDVDKITVIGSGEAAASVATFPLTSAAGNLFSRII 113
GN G D + A+ W+ +NI F GD D++ ++G A S ++ A LF I
Sbjct: 1185 TSGNYGFMDQIMALSWIHTNIARFGGDPDRVILLGQSSGATSSLALLVSPLANGLFHGAI 1244
Query: 114 VESGS 118
+ S S
Sbjct: 1245 LMSAS 1249
>SB_43484| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 144
Score = 54.4 bits (125), Expect = 1e-07
Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 7/71 (9%)
Query: 11 VIIWIHERSYCHGPDFFIDENI-------IVVTVSFRTGIFGYLNTGDGFALGNMGAKDM 63
V++WI+ + +G + + +I IVV V++R GIFG+L TG GN G D
Sbjct: 72 VMVWIYGGGFMNGANRLYESSILAGEGDVIVVVVNYRVGIFGFLATGKNGLTGNYGMLDQ 131
Query: 64 LTAIKWVKSNI 74
+ +++WVKSNI
Sbjct: 132 VKSLQWVKSNI 142
>SB_53891| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 533
Score = 54.0 bits (124), Expect = 2e-07
Identities = 23/82 (28%), Positives = 47/82 (57%), Gaps = 8/82 (9%)
Query: 6 ATGFPVIIWIHERSYCHGPD--------FFIDENIIVVTVSFRTGIFGYLNTGDGFALGN 57
+ +PV++W+ ++ G + I+VV++++R G G+L+TG+ GN
Sbjct: 129 SASYPVMVWVQGGAFIMGTSARQSDASLLATEGEIVVVSINYRLGALGFLSTGEDGLNGN 188
Query: 58 MGAKDMLTAIKWVKSNIKNFKG 79
G D++ A++WV++NI+ + G
Sbjct: 189 FGMLDVIEALRWVQNNIERYYG 210
>SB_10885| Best HMM Match : COesterase (HMM E-Value=1.4)
Length = 195
Score = 52.0 bits (119), Expect = 7e-07
Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 7/71 (9%)
Query: 11 VIIWIHERSYCHGPDFFIDENII-------VVTVSFRTGIFGYLNTGDGFALGNMGAKDM 63
V++WI+ ++ G + D ++I VV V++R GIFG+L TG GN G D
Sbjct: 123 VMVWIYGGAFVSGANRLYDGSVISGEGDVIVVVVNYRVGIFGFLATGKNGVTGNYGMLDQ 182
Query: 64 LTAIKWVKSNI 74
+ +++WV+ NI
Sbjct: 183 VKSLQWVRGNI 193
>SB_8609| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 985
Score = 50.4 bits (115), Expect = 2e-06
Identities = 29/81 (35%), Positives = 45/81 (55%), Gaps = 11/81 (13%)
Query: 3 LTNATGFPVIIWIHERSYCHGPDFFIDE-------NIIVVTVSFRTGIFGYLNTGDGFAL 55
+TN++ PV+++IH + G D N+IVV + +R G+FGYL G
Sbjct: 110 ITNSS-LPVMVFIHGGGFFAGGARSFDGSFQATIGNVIVVVIQYRLGVFGYLYNG---KK 165
Query: 56 GNMGAKDMLTAIKWVKSNIKN 76
GN G D + A+KWV+ NI++
Sbjct: 166 GNFGMLDQIMALKWVQKNIES 186
Score = 42.3 bits (95), Expect = 6e-04
Identities = 20/66 (30%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 74 IKNFKGDVDKITVIGSGEAAASVATFPLTSAAGNLFSRIIVESGSALS--PENYRNYNFE 131
I+ F G+ ++T+ G ASVA L+ G LF +I++SGSA++ Y++ +
Sbjct: 244 IETFGGNPQQVTIYGESAGGASVALLMLSPLTGGLFKNVIIQSGSAVANYAAAYKDEGVK 303
Query: 132 ISNKLY 137
+S + +
Sbjct: 304 VSRRRF 309
>SB_11960| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 359
Score = 36.3 bits (80), Expect = 0.039
Identities = 18/46 (39%), Positives = 23/46 (50%)
Query: 74 IKNFKGDVDKITVIGSGEAAASVATFPLTSAAGNLFSRIIVESGSA 119
I F GD K+T+ G ASV L+ A LF I +SG+A
Sbjct: 13 IYRFGGDAGKVTIFGESAGGASVGLLMLSPLANGLFRSAIPQSGNA 58
>SB_11959| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 539
Score = 35.9 bits (79), Expect = 0.051
Identities = 18/43 (41%), Positives = 22/43 (51%)
Query: 77 FKGDVDKITVIGSGEAAASVATFPLTSAAGNLFSRIIVESGSA 119
F GD K+T+ G ASV L+ A LF I +SGSA
Sbjct: 15 FGGDPGKVTIFGESAGGASVGLLMLSPLANGLFRSAIPQSGSA 57
>SB_40548| Best HMM Match : COesterase (HMM E-Value=3e-21)
Length = 424
Score = 33.9 bits (74), Expect = 0.21
Identities = 14/37 (37%), Positives = 22/37 (59%)
Query: 31 NIIVVTVSFRTGIFGYLNTGDGFALGNMGAKDMLTAI 67
++IVVT+++R G+ G+ N D GN G D A+
Sbjct: 142 DVIVVTINYRLGVLGFFNIPDTDVKGNYGLFDQSLAL 178
>SB_19573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 554
Score = 33.9 bits (74), Expect = 0.21
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 5/74 (6%)
Query: 160 TTNELLLASGALF--DSTEYLVPFEGKIDEYGSKRYQEIRQRIMDFYFANGTIGERSLRR 217
++N+LLL + D E+LVPF GS++Y EI Q + F N +G +
Sbjct: 130 SSNKLLLVAVCYRAPDDNEFLVPFRSLTGLTGSRKYAEI-QWVEGSGFVNSDVGIKC--E 186
Query: 218 YAKYVSDQAIYPVI 231
+A +SD +Y ++
Sbjct: 187 FANILSDAFLYQLV 200
>SB_2845| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 334
Score = 32.3 bits (70), Expect = 0.63
Identities = 33/106 (31%), Positives = 50/106 (47%), Gaps = 10/106 (9%)
Query: 111 RIIVESGSALSPENYRNYNFEISNKLYWNLNGPFKKLNRTNLYQILANSTTNELLLASGA 170
+I E +AL +Y Y+F S + + P K+++ T + + TTNEL L SGA
Sbjct: 195 KIDYEGDAALEYSDY--YDFSTS----YPSDNPDKEIDETASGTLSVDETTNELCLPSGA 248
Query: 171 LFDSTEYLVPFEGKI-DEYGSKRYQEIRQRIMDFYFA---NGTIGE 212
E + + E + +IR+ IM Y A +GTIGE
Sbjct: 249 RAGHRELRHYYRQNLPPEKDIHQLTKIRKSIMADYKALGWHGTIGE 294
>SB_57724| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 3804
Score = 31.5 bits (68), Expect = 1.1
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Query: 246 YLYRFSYKGCLNIVRDLLLRNFKLTGATGGD--EVCYQFTCKSANRLY 291
Y+YRFS+ GC N R LR + L G D + CY K R++
Sbjct: 3664 YIYRFSFVGCFNDRRSRALRTY-LGFKRGKDAAQQCYNAAVKRGFRMF 3710
>SB_22840| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 4002
Score = 31.5 bits (68), Expect = 1.1
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Query: 246 YLYRFSYKGCLNIVRDLLLRNFKLTGATGGD--EVCYQFTCKSANRLY 291
Y+YRFS+ GC N R LR + L G D + CY K R++
Sbjct: 234 YIYRFSFVGCFNDRRSRALRTY-LGFKRGKDAAQQCYNAAVKRGFRMF 280
>SB_48268| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4527
Score = 30.7 bits (66), Expect = 1.9
Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 6/99 (6%)
Query: 124 NYRNYNFEISNKLYWNLNGP--FKK-LNRTNLYQILANS--TTNELLLASGALFDST-EY 177
+Y+ + IS+ L WNL+ FKK + R ++L S T+ +L ++ ST EY
Sbjct: 4347 SYKLLGYSISDDLSWNLHCETIFKKAMKRLYGLRVLKKSGLTSEDLATVYCSIVRSTLEY 4406
Query: 178 LVPFEGKIDEYGSKRYQEIRQRIMDFYFANGTIGERSLR 216
P + Y S+ + ++++ M F T E LR
Sbjct: 4407 ASPAWAALPGYLSELLESVQRKAMRTIFPGVTYEEALLR 4445
>SB_38133| Best HMM Match : TolA (HMM E-Value=0.38)
Length = 2114
Score = 29.5 bits (63), Expect = 4.4
Identities = 24/96 (25%), Positives = 40/96 (41%), Gaps = 10/96 (10%)
Query: 47 LNTGDGFALGNMGAKDMLTAIKWVKSNIKNFKGDVDKITVIGSGEAAASVATFPLTSAAG 106
+ G G MG D + +W K +NFK K + S E+ S G
Sbjct: 622 VEAGTNKGYGIMGTTDKEDSEEWGKEEARNFK-TTPKRPKVSSAESG---------SGEG 671
Query: 107 NLFSRIIVESGSALSPENYRNYNFEISNKLYWNLNG 142
+ FSR I+ +G L + + + ++KL ++ G
Sbjct: 672 SGFSRQIIAAGEGLLQKQFDKFKAPAASKLNRDVMG 707
>SB_28868| Best HMM Match : WSC (HMM E-Value=0.026)
Length = 272
Score = 28.7 bits (61), Expect = 7.7
Identities = 27/96 (28%), Positives = 43/96 (44%), Gaps = 5/96 (5%)
Query: 95 SVATFPLTSAAGNLFSRIIVESGSALSPENYRNYNFEISNKLYWNLNGPFKK----LNRT 150
S A + LT+ A N+ + V S AL + R F + L +LN + +
Sbjct: 16 SCAFYRLTNEALNILEYLCVRS-KALIADRLRLIRFAFKSALNCHLNPTLPRDHGVSHPV 74
Query: 151 NLYQILANSTTNELLLASGALFDSTEYLVPFEGKID 186
LY + N + +L+A GA+F S V G+I+
Sbjct: 75 QLYPLHNNMASRIVLVALGAVFASVLISVYGTGEIE 110
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.320 0.138 0.411
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,955,846
Number of Sequences: 59808
Number of extensions: 498793
Number of successful extensions: 1203
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 1168
Number of HSP's gapped (non-prelim): 33
length of query: 360
length of database: 16,821,457
effective HSP length: 83
effective length of query: 277
effective length of database: 11,857,393
effective search space: 3284497861
effective search space used: 3284497861
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 61 (28.7 bits)
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