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Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001855-TA|BGIBMGA001855-PA|IPR012581|NUC156
         (158 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A2ZQ22 Cluster: Putative uncharacterized protein; n=3; ...    45   0.001
UniRef50_A7SU45 Cluster: Predicted protein; n=2; Nematostella ve...    43   0.004
UniRef50_UPI0000F21121 Cluster: PREDICTED: similar to nucleolar ...    42   0.006
UniRef50_A2DC98 Cluster: Putative uncharacterized protein; n=1; ...    42   0.008
UniRef50_A5BSB7 Cluster: Putative uncharacterized protein; n=1; ...    41   0.011
UniRef50_Q4S678 Cluster: Chromosome 9 SCAF14729, whole genome sh...    41   0.015
UniRef50_UPI0000F2D396 Cluster: PREDICTED: similar to nucleolar ...    40   0.019
UniRef50_Q9U3B6 Cluster: Putative uncharacterized protein; n=2; ...    40   0.026
UniRef50_Q5SY16 Cluster: Nucleolar protein 9; n=18; Eutheria|Rep...    40   0.034
UniRef50_UPI0000E48739 Cluster: PREDICTED: similar to nucleolar ...    38   0.078
UniRef50_Q8SZP4 Cluster: RE71565p; n=3; Sophophora|Rep: RE71565p...    38   0.10 
UniRef50_A2F4S5 Cluster: Putative uncharacterized protein; n=1; ...    37   0.24 
UniRef50_Q54Z27 Cluster: Putative uncharacterized protein; n=1; ...    36   0.42 
UniRef50_A4RRP1 Cluster: Predicted protein; n=2; Ostreococcus|Re...    35   0.73 
UniRef50_UPI00015B5519 Cluster: PREDICTED: similar to GA21059-PA...    34   1.3  
UniRef50_Q4WID9 Cluster: Protein grc3; n=7; Trichocomaceae|Rep: ...    34   1.3  
UniRef50_A7BYW9 Cluster: Putative uncharacterized protein; n=1; ...    34   1.7  
UniRef50_UPI0000D56749 Cluster: PREDICTED: similar to CG3622-PB,...    33   2.2  
UniRef50_Q16K19 Cluster: Putative uncharacterized protein; n=1; ...    33   2.2  
UniRef50_Q9V414 Cluster: CG8954-PA, isoform A; n=3; Drosophila m...    33   3.9  
UniRef50_Q29K85 Cluster: GA21432-PA; n=1; Drosophila pseudoobscu...    32   6.8  
UniRef50_Q58711 Cluster: Uncharacterized protein MJ1315; n=4; Eu...    32   6.8  
UniRef50_UPI0000E48ED2 Cluster: PREDICTED: hypothetical protein;...    31   9.0  
UniRef50_A2WUP1 Cluster: Putative uncharacterized protein; n=4; ...    31   9.0  
UniRef50_A7ERD9 Cluster: Putative uncharacterized protein; n=1; ...    31   9.0  

>UniRef50_A2ZQ22 Cluster: Putative uncharacterized protein; n=3;
           Oryza sativa|Rep: Putative uncharacterized protein -
           Oryza sativa subsp. japonica (Rice)
          Length = 379

 Score = 44.8 bits (101), Expect = 0.001
 Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 9/82 (10%)

Query: 25  LCIGLNVRVPEDTVTKVINGKIVALC-KLTTVDKGKMFTLGDKAIP-CLGNGLVRCVDFE 82
           + I L+ +VP   V   +N  IV L     T++ G+       +IP C G G++R +D +
Sbjct: 269 MVIHLHCQVPPSEVWHSLNATIVGLAISCGTIEAGR-------SIPWCAGLGIIRGIDVQ 321

Query: 83  KQVLYIITPLPVGILSQVNTLV 104
           + +LY+ITP+P+  L +V+ L+
Sbjct: 322 RGILYVITPVPLEHLQRVDLLL 343


>UniRef50_A7SU45 Cluster: Predicted protein; n=2; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 886

 Score = 42.7 bits (96), Expect = 0.004
 Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 8/84 (9%)

Query: 29  LNVRVPEDTVTKVINGKIVALC-KLTTVDKG-------KMFTLGDKAIPCLGNGLVRCVD 80
           ++  VP   V   +N  IV L    +T   G       K+      ++ CLG G+VR VD
Sbjct: 358 VHTEVPRSHVLMSLNASIVGLAVSSSTKASGDLEQSEVKVLHKAPHSLECLGLGIVRNVD 417

Query: 81  FEKQVLYIITPLPVGILSQVNTLV 104
              ++ YI+TP+P+ +L +VN L+
Sbjct: 418 PVNKLFYILTPVPLDVLKRVNILL 441


>UniRef50_UPI0000F21121 Cluster: PREDICTED: similar to nucleolar
           protein 9; n=1; Danio rerio|Rep: PREDICTED: similar to
           nucleolar protein 9 - Danio rerio
          Length = 711

 Score = 41.9 bits (94), Expect = 0.006
 Identities = 26/97 (26%), Positives = 49/97 (50%), Gaps = 4/97 (4%)

Query: 15  FSCFRVELKNLCIGL-NVRVPEDTVTKVINGKIVALCKLT--TVDKGKMFTLGDKAI-PC 70
           F  ++V   ++ IG+ +  V  + +    N  +V LC L+   V +G    L    I  C
Sbjct: 564 FIPYQVPHSSVAIGVTHCEVAPNNILYAANASVVGLCCLSEKVVGRGGPVILSQTPICQC 623

Query: 71  LGNGLVRCVDFEKQVLYIITPLPVGILSQVNTLVYSD 107
           +G G++R VD  + + +++TP+   +L  VN L+  +
Sbjct: 624 VGLGVLRGVDMGRGLYFLVTPVSPSVLKHVNCLLLGE 660


>UniRef50_A2DC98 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 447

 Score = 41.5 bits (93), Expect = 0.008
 Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 7/77 (9%)

Query: 20  VELKNLCIGLNVR--VPEDTVTKVINGKIVALC----KLTTVDKGKMFTLGDKAIPCLGN 73
           + L+++ IG  +    P +++T  +NG +VALC    K    D+          + C+G 
Sbjct: 315 INLRSIRIGFVLADVAPTESLT-ALNGSVVALCLDNRKFAKTDRLVTLLRDIPPLQCIGY 373

Query: 74  GLVRCVDFEKQVLYIIT 90
           GLVR +D  K +LY+IT
Sbjct: 374 GLVRAIDKRKGILYLIT 390


>UniRef50_A5BSB7 Cluster: Putative uncharacterized protein; n=1;
           Vitis vinifera|Rep: Putative uncharacterized protein -
           Vitis vinifera (Grape)
          Length = 286

 Score = 41.1 bits (92), Expect = 0.011
 Identities = 16/36 (44%), Positives = 27/36 (75%)

Query: 69  PCLGNGLVRCVDFEKQVLYIITPLPVGILSQVNTLV 104
           PC+G G+VR +D  K++LY++TP+P   L +V+ L+
Sbjct: 216 PCVGLGIVRGIDTFKRLLYVLTPVPQSTLEKVDLLL 251


>UniRef50_Q4S678 Cluster: Chromosome 9 SCAF14729, whole genome
           shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 9
           SCAF14729, whole genome shotgun sequence - Tetraodon
           nigroviridis (Green puffer)
          Length = 349

 Score = 40.7 bits (91), Expect = 0.015
 Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 4/66 (6%)

Query: 43  NGKIVALCKLT---TVDKGKMFTLGDKAI-PCLGNGLVRCVDFEKQVLYIITPLPVGILS 98
           NG +V LC L       +G    L    I PC+G G++R +D E+ + +++TP+   IL 
Sbjct: 225 NGSLVGLCCLAEKVNSSRGGPVLLSQAPICPCVGFGVLRGIDKERGLYFLLTPVDPSILR 284

Query: 99  QVNTLV 104
            VN L+
Sbjct: 285 NVNCLL 290


>UniRef50_UPI0000F2D396 Cluster: PREDICTED: similar to nucleolar
           protein 9; n=3; Amniota|Rep: PREDICTED: similar to
           nucleolar protein 9 - Monodelphis domestica
          Length = 889

 Score = 40.3 bits (90), Expect = 0.019
 Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 4/67 (5%)

Query: 42  INGKIVALCKLTTVDK----GKMFTLGDKAIPCLGNGLVRCVDFEKQVLYIITPLPVGIL 97
           +N   + LC++    K    G +F   +    C+G G++R +   K+V Y++TPL    L
Sbjct: 773 VNASWIGLCRILDDVKQKTDGPVFLTDNPVCDCVGFGIIRGISMVKKVYYVLTPLSHEKL 832

Query: 98  SQVNTLV 104
            QVN L+
Sbjct: 833 RQVNCLM 839


>UniRef50_Q9U3B6 Cluster: Putative uncharacterized protein; n=2;
           Caenorhabditis|Rep: Putative uncharacterized protein -
           Caenorhabditis elegans
          Length = 549

 Score = 39.9 bits (89), Expect = 0.026
 Identities = 26/98 (26%), Positives = 51/98 (52%), Gaps = 12/98 (12%)

Query: 19  RVELKNLCIGLNVRVPEDTVTKVINGKIVALC-KLTTVDKGKMFTLGD-----------K 66
           R E   +C+ +++ V +  V   IN +I+ALC   T +   K++   D            
Sbjct: 397 RFENVTICVPVDLLVEDSHVFSSINTQIMALCINNTDLKPRKLYGKDDLPSICVIDGNSP 456

Query: 67  AIPCLGNGLVRCVDFEKQVLYIITPLPVGILSQVNTLV 104
           A+ C+G G++R V  E+++++++TP+ +  L +   LV
Sbjct: 457 ALQCIGFGIIRGVSVEERIIFVVTPVDLLKLEEPPVLV 494


>UniRef50_Q5SY16 Cluster: Nucleolar protein 9; n=18; Eutheria|Rep:
           Nucleolar protein 9 - Homo sapiens (Human)
          Length = 702

 Score = 39.5 bits (88), Expect = 0.034
 Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 4/67 (5%)

Query: 42  INGKIVALCKLTT----VDKGKMFTLGDKAIPCLGNGLVRCVDFEKQVLYIITPLPVGIL 97
           +N   V LCK+         G +         CLG G+ R +D EK++ +I+TP+P   L
Sbjct: 573 VNASWVGLCKIQDDVRGYTNGPILLAQTPICDCLGFGICRGIDMEKRLYHILTPVPPEEL 632

Query: 98  SQVNTLV 104
             VN L+
Sbjct: 633 RTVNCLL 639


>UniRef50_UPI0000E48739 Cluster: PREDICTED: similar to nucleolar
           protein 9, partial; n=1; Strongylocentrotus
           purpuratus|Rep: PREDICTED: similar to nucleolar protein
           9, partial - Strongylocentrotus purpuratus
          Length = 71

 Score = 38.3 bits (85), Expect = 0.078
 Identities = 20/45 (44%), Positives = 29/45 (64%), Gaps = 1/45 (2%)

Query: 70  CLGNGLVRCVDFEKQVLYIITPLPVGILSQVNT-LVYSDWAPEIV 113
           CLG G++R +D +K+  YI+  L   +L +VNT LV S + PE V
Sbjct: 24  CLGIGIIRGIDPQKKAFYILPALSNDLLPKVNTLLVGSPFIPECV 68


>UniRef50_Q8SZP4 Cluster: RE71565p; n=3; Sophophora|Rep: RE71565p -
           Drosophila melanogaster (Fruit fly)
          Length = 995

 Score = 37.9 bits (84), Expect = 0.10
 Identities = 14/35 (40%), Positives = 26/35 (74%)

Query: 70  CLGNGLVRCVDFEKQVLYIITPLPVGILSQVNTLV 104
           CLG G+VR +D+E++ LY++  +P+  +S V+ L+
Sbjct: 904 CLGIGVVRAIDYERKELYLVPAMPLQKMSLVDCLI 938


>UniRef50_A2F4S5 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 447

 Score = 36.7 bits (81), Expect = 0.24
 Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 4/76 (5%)

Query: 29  LNVRVPEDTVTKVINGKIVALCKLTTV--DKGKMFTLGDKA--IPCLGNGLVRCVDFEKQ 84
           +NV++    +    NG IVAL   T       K+ T+  K   +P +G G V+ +D  + 
Sbjct: 325 INVKIDPTEILMAFNGSIVALFNDTRKFPPNKKLVTILRKITPMPIIGYGFVKAIDKAQG 384

Query: 85  VLYIITPLPVGILSQV 100
           ++Y++T +P   ++ V
Sbjct: 385 IMYVVTDVPPDAINTV 400


>UniRef50_Q54Z27 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 683

 Score = 35.9 bits (79), Expect = 0.42
 Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 1/59 (1%)

Query: 70  CLGNGLVRCVDFEKQVLYIITPLPVGILSQVNTLVY-SDWAPEIVGQEKYLPDNIIVPY 127
           C+G GL+R +D      YIITP+   +L   NT++  S   P+ +         I+VPY
Sbjct: 601 CIGLGLIRSIDMVNGYYYIITPIDPSLLEISNTILKGSIEIPQTLTISVSSKGKILVPY 659


>UniRef50_A4RRP1 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
           Predicted protein - Ostreococcus lucimarinus CCE9901
          Length = 480

 Score = 35.1 bits (77), Expect = 0.73
 Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 2/53 (3%)

Query: 70  CLGNGLVRCVDFEKQVLYIITPLPVGILSQVNTLVYS--DWAPEIVGQEKYLP 120
           C+G G+VR +D + + +YI+TP+    L  V TL     ++ P ++G     P
Sbjct: 395 CVGVGVVRGIDVDNRYVYILTPVSSEKLKSVTTLALGTLEFPPRLLGHAGEYP 447


>UniRef50_UPI00015B5519 Cluster: PREDICTED: similar to GA21059-PA;
           n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
           GA21059-PA - Nasonia vitripennis
          Length = 913

 Score = 34.3 bits (75), Expect = 1.3
 Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 10/76 (13%)

Query: 38  VTKVINGKIVALCKLT----TVDKGKMFTLGDKAI------PCLGNGLVRCVDFEKQVLY 87
           +   +NG IVALC +     + D  K      K +       C G G+VR +D +++ L+
Sbjct: 788 ILAAMNGNIVALCGIDLDDDSSDTDKESLTYPKVVIKPPPSTCYGYGIVRGIDMKQRCLF 847

Query: 88  IITPLPVGILSQVNTL 103
           + TPL    L  VN L
Sbjct: 848 VNTPLTESQLQYVNLL 863


>UniRef50_Q4WID9 Cluster: Protein grc3; n=7; Trichocomaceae|Rep:
           Protein grc3 - Aspergillus fumigatus (Sartorya fumigata)
          Length = 841

 Score = 34.3 bits (75), Expect = 1.3
 Identities = 18/43 (41%), Positives = 22/43 (51%)

Query: 55  VDKGKMFTLGDKAIPCLGNGLVRCVDFEKQVLYIITPLPVGIL 97
           V  G    L  KA  CLG  LVR +D   + L +ITP+P   L
Sbjct: 678 VGSGSCNPLDPKASNCLGLALVRSIDVPSRKLELITPIPASKL 720


>UniRef50_A7BYW9 Cluster: Putative uncharacterized protein; n=1;
           Beggiatoa sp. PS|Rep: Putative uncharacterized protein -
           Beggiatoa sp. PS
          Length = 195

 Score = 33.9 bits (74), Expect = 1.7
 Identities = 23/78 (29%), Positives = 41/78 (52%), Gaps = 11/78 (14%)

Query: 81  FEKQVLYIITPLPVGILSQVNTLVYSDWAPEIVGQEKYLPDNIIVPYRITSQQKQKQLMI 140
           +E  +L I+ P+ VGI+      +Y    P+++G+    P+ I++P  I  Q KQ   + 
Sbjct: 8   YELLILGIMAPIIVGII------LYH--YPDLIGEPISEPEEIVIPADIAEQLKQ---LH 56

Query: 141 TPRRRFNPLVLLNMSRKT 158
            P++ F  ++ LN   KT
Sbjct: 57  NPKKAFKVILWLNEPNKT 74


>UniRef50_UPI0000D56749 Cluster: PREDICTED: similar to CG3622-PB,
           isoform B; n=1; Tribolium castaneum|Rep: PREDICTED:
           similar to CG3622-PB, isoform B - Tribolium castaneum
          Length = 942

 Score = 33.5 bits (73), Expect = 2.2
 Identities = 16/38 (42%), Positives = 21/38 (55%)

Query: 56  DKGKMFTLGDKAIPCLGNGLVRCVDFEKQVLYIITPLP 93
           D  +    GDK+  CL NG+   + F+   LYII PLP
Sbjct: 102 DDARCHYRGDKSALCLCNGIKGLLYFDNDSLYIIHPLP 139


>UniRef50_Q16K19 Cluster: Putative uncharacterized protein; n=1; Aedes
            aegypti|Rep: Putative uncharacterized protein - Aedes
            aegypti (Yellowfever mosquito)
          Length = 1041

 Score = 33.5 bits (73), Expect = 2.2
 Identities = 25/69 (36%), Positives = 34/69 (49%), Gaps = 11/69 (15%)

Query: 35   EDTVTKVINGKIVALCKLTTVDKGKMFTLGDKAIPCLGNGLVRCVDFEKQVLYIITPLPV 94
            +D +  V+N  +V LC+    D G           CLG G+VR VD    V Y++  LP 
Sbjct: 954  DDQLPSVLNATLVYLCRKD--DAG--------LYECLGIGIVRGVDKNNNV-YLLQSLPE 1002

Query: 95   GILSQVNTL 103
              L+QVN L
Sbjct: 1003 ARLAQVNVL 1011


>UniRef50_Q9V414 Cluster: CG8954-PA, isoform A; n=3; Drosophila
           melanogaster|Rep: CG8954-PA, isoform A - Drosophila
           melanogaster (Fruit fly)
          Length = 1177

 Score = 32.7 bits (71), Expect = 3.9
 Identities = 16/71 (22%), Positives = 36/71 (50%), Gaps = 1/71 (1%)

Query: 17  CFRVELKNLCIGLNVRVPEDTVTKVINGKIVALCKLTTVDKGKMFTLGDKAIPCLGNGLV 76
           C  ++L+ +     +RVPE ++ K+++     L KL  ++  K+++L    +    + + 
Sbjct: 346 CVLIDLRKILCSQQLRVPEPSIFKIVSILFFCLSKLKMINSPKVYSLHAFLVAACSDLMD 405

Query: 77  RC-VDFEKQVL 86
            C V  E+ +L
Sbjct: 406 ACIVSIEQTIL 416


>UniRef50_Q29K85 Cluster: GA21432-PA; n=1; Drosophila
           pseudoobscura|Rep: GA21432-PA - Drosophila pseudoobscura
           (Fruit fly)
          Length = 1210

 Score = 31.9 bits (69), Expect = 6.8
 Identities = 16/71 (22%), Positives = 36/71 (50%), Gaps = 1/71 (1%)

Query: 17  CFRVELKNLCIGLNVRVPEDTVTKVINGKIVALCKLTTVDKGKMFTLGDKAIPCLGNGLV 76
           C  ++L+ +     +R+PE ++ K+I+     L KL  ++  K+++L    +    + + 
Sbjct: 357 CVLIDLRKILCSQQLRMPEPSIYKIISILFFCLSKLKMINSPKVYSLHAFLVAACSDLMD 416

Query: 77  RC-VDFEKQVL 86
            C V  E+ +L
Sbjct: 417 ACIVSIEQTIL 427


>UniRef50_Q58711 Cluster: Uncharacterized protein MJ1315; n=4;
           Euryarchaeota|Rep: Uncharacterized protein MJ1315 -
           Methanococcus jannaschii
          Length = 361

 Score = 31.9 bits (69), Expect = 6.8
 Identities = 14/52 (26%), Positives = 28/52 (53%)

Query: 70  CLGNGLVRCVDFEKQVLYIITPLPVGILSQVNTLVYSDWAPEIVGQEKYLPD 121
           C+G G+++ +DFE + L I+TP+    +  +  + +     +  G+E  L D
Sbjct: 306 CIGLGILKTIDFENETLEILTPISEEDIKNIREIRFGRIRVDENGEELGLLD 357


>UniRef50_UPI0000E48ED2 Cluster: PREDICTED: hypothetical protein;
           n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
           hypothetical protein - Strongylocentrotus purpuratus
          Length = 1146

 Score = 31.5 bits (68), Expect = 9.0
 Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 1/71 (1%)

Query: 64  GDKAIPCLGNGLVRCVDFEKQVLYIITPLPVGILSQVNTLVYSDWAPEIVGQEKYLPDNI 123
           GDK  P     ++R     K +     PLP+   S   T + S  AP +V   K +P   
Sbjct: 507 GDKTRPQTKMSMIRARSVAKSMTEFEEPLPMPFASPPRTAISSS-APMLVYHPKPVPPPA 565

Query: 124 IVPYRITSQQK 134
           ++P   T+ +K
Sbjct: 566 VLPLTRTNHEK 576


>UniRef50_A2WUP1 Cluster: Putative uncharacterized protein; n=4;
           Oryza sativa|Rep: Putative uncharacterized protein -
           Oryza sativa subsp. indica (Rice)
          Length = 259

 Score = 31.5 bits (68), Expect = 9.0
 Identities = 14/59 (23%), Positives = 28/59 (47%)

Query: 93  PVGILSQVNTLVYSDWAPEIVGQEKYLPDNIIVPYRITSQQKQKQLMITPRRRFNPLVL 151
           P G      TL  +      VG   ++P ++IV +R   ++K   +++ P+ R   +V+
Sbjct: 199 PAGFSKFGQTLAGAGGGSFFVGSHVFVPPHVIVDHRRAKREKAMMMLVVPKGRARKMVM 257


>UniRef50_A7ERD9 Cluster: Putative uncharacterized protein; n=1;
            Sclerotinia sclerotiorum 1980|Rep: Putative
            uncharacterized protein - Sclerotinia sclerotiorum 1980
          Length = 1550

 Score = 31.5 bits (68), Expect = 9.0
 Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 10/64 (15%)

Query: 52   LTTVDKGKMFTLGDKAIPCLGNGLVRCVDFEKQ------VLYIITPLPVGILSQVNTLVY 105
            LTT + GK   + D+A PC G+      +F K+       ++    +P+GI + V   V+
Sbjct: 1303 LTTCEGGKQMDVSDEAFPCAGHE----DEFNKKHAASGWAIFFAVIIPIGIATAVGFWVW 1358

Query: 106  SDWA 109
             +W+
Sbjct: 1359 RNWS 1362


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.324    0.141    0.421 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,538,630
Number of Sequences: 1657284
Number of extensions: 6712739
Number of successful extensions: 12132
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 12111
Number of HSP's gapped (non-prelim): 25
length of query: 158
length of database: 575,637,011
effective HSP length: 94
effective length of query: 64
effective length of database: 419,852,315
effective search space: 26870548160
effective search space used: 26870548160
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 68 (31.5 bits)

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