Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001855-TA|BGIBMGA001855-PA|IPR012581|NUC156
(158 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC112278-1|AAI12279.1| 702|Homo sapiens nucleolar protein 9 pro... 40 0.005
BC110849-1|AAI10850.1| 702|Homo sapiens nucleolar protein 9 pro... 40 0.005
BC105095-1|AAI05096.1| 702|Homo sapiens nucleolar protein 9 pro... 40 0.005
BC094836-1|AAH94836.1| 525|Homo sapiens NOL9 protein protein. 40 0.005
BC063639-1|AAH63639.1| 414|Homo sapiens NOL9 protein protein. 40 0.005
BC012439-1|AAH12439.1| 259|Homo sapiens NOL9 protein protein. 40 0.005
BC009257-1|AAH09257.2| 430|Homo sapiens NOL9 protein protein. 40 0.005
AL591866-4|CAI16071.1| 702|Homo sapiens novel protein protein. 40 0.005
AK026976-1|BAB15611.1| 332|Homo sapiens protein ( Homo sapiens ... 40 0.005
S78388-1|AAB20813.1| 443|Homo sapiens autoantigen recognized by... 30 3.1
M63256-1|AAA51961.1| 509|Homo sapiens major Yo paraneoplastic a... 30 3.1
D12981-1|BAA02360.1| 443|Homo sapiens paraneoplastic cerebellar... 30 3.1
BC017503-1|AAH17503.2| 454|Homo sapiens cerebellar degeneration... 30 3.1
BC127114-1|AAI27115.1| 1224|Homo sapiens ZMYM4 protein protein. 29 7.2
BC127113-1|AAI27114.1| 1516|Homo sapiens ZMYM4 protein protein. 29 7.2
BC012093-1|AAH12093.2| 1434|Homo sapiens ZMYM4 protein protein. 29 7.2
AL590434-3|CAI12468.1| 1548|Homo sapiens zinc finger, MYM-type 4... 29 7.2
AL356362-7|CAI22691.1| 1548|Homo sapiens zinc finger, MYM-type 4... 29 7.2
AL356362-3|CAI22687.1| 1206|Homo sapiens zinc finger, MYM-type 4... 29 7.2
AL160000-1|CAH71313.1| 1548|Homo sapiens zinc finger, MYM-type 4... 29 7.2
AB007885-1|BAA24855.2| 1270|Homo sapiens KIAA0425 protein. 29 7.2
AY219181-1|AAO60072.1| 4243|Homo sapiens fibrocystin L protein. 29 9.5
>BC112278-1|AAI12279.1| 702|Homo sapiens nucleolar protein 9
protein.
Length = 702
Score = 39.5 bits (88), Expect = 0.005
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Query: 42 INGKIVALCKLTT----VDKGKMFTLGDKAIPCLGNGLVRCVDFEKQVLYIITPLPVGIL 97
+N V LCK+ G + CLG G+ R +D EK++ +I+TP+P L
Sbjct: 573 VNASWVGLCKIQDDVRGYTNGPILLAQTPICDCLGFGICRGIDMEKRLYHILTPVPPEEL 632
Query: 98 SQVNTLV 104
VN L+
Sbjct: 633 RTVNCLL 639
>BC110849-1|AAI10850.1| 702|Homo sapiens nucleolar protein 9
protein.
Length = 702
Score = 39.5 bits (88), Expect = 0.005
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Query: 42 INGKIVALCKLTT----VDKGKMFTLGDKAIPCLGNGLVRCVDFEKQVLYIITPLPVGIL 97
+N V LCK+ G + CLG G+ R +D EK++ +I+TP+P L
Sbjct: 573 VNASWVGLCKIQDDVRGYTNGPILLAQTPICDCLGFGICRGIDMEKRLYHILTPVPPEEL 632
Query: 98 SQVNTLV 104
VN L+
Sbjct: 633 RTVNCLL 639
>BC105095-1|AAI05096.1| 702|Homo sapiens nucleolar protein 9
protein.
Length = 702
Score = 39.5 bits (88), Expect = 0.005
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Query: 42 INGKIVALCKLTT----VDKGKMFTLGDKAIPCLGNGLVRCVDFEKQVLYIITPLPVGIL 97
+N V LCK+ G + CLG G+ R +D EK++ +I+TP+P L
Sbjct: 573 VNASWVGLCKIQDDVRGYTNGPILLAQTPICDCLGFGICRGIDMEKRLYHILTPVPPEEL 632
Query: 98 SQVNTLV 104
VN L+
Sbjct: 633 RTVNCLL 639
>BC094836-1|AAH94836.1| 525|Homo sapiens NOL9 protein protein.
Length = 525
Score = 39.5 bits (88), Expect = 0.005
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Query: 42 INGKIVALCKLTT----VDKGKMFTLGDKAIPCLGNGLVRCVDFEKQVLYIITPLPVGIL 97
+N V LCK+ G + CLG G+ R +D EK++ +I+TP+P L
Sbjct: 396 VNASWVGLCKIQDDVRGYTNGPILLAQTPICDCLGFGICRGIDMEKRLYHILTPVPPEEL 455
Query: 98 SQVNTLV 104
VN L+
Sbjct: 456 RTVNCLL 462
>BC063639-1|AAH63639.1| 414|Homo sapiens NOL9 protein protein.
Length = 414
Score = 39.5 bits (88), Expect = 0.005
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Query: 42 INGKIVALCKLTT----VDKGKMFTLGDKAIPCLGNGLVRCVDFEKQVLYIITPLPVGIL 97
+N V LCK+ G + CLG G+ R +D EK++ +I+TP+P L
Sbjct: 285 VNASWVGLCKIQDDVRGYTNGPILLAQTPICDCLGFGICRGIDMEKRLYHILTPVPPEEL 344
Query: 98 SQVNTLV 104
VN L+
Sbjct: 345 RTVNCLL 351
>BC012439-1|AAH12439.1| 259|Homo sapiens NOL9 protein protein.
Length = 259
Score = 39.5 bits (88), Expect = 0.005
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Query: 42 INGKIVALCKLTT----VDKGKMFTLGDKAIPCLGNGLVRCVDFEKQVLYIITPLPVGIL 97
+N V LCK+ G + CLG G+ R +D EK++ +I+TP+P L
Sbjct: 130 VNASWVGLCKIQDDVRGYTNGPILLAQTPICDCLGFGICRGIDMEKRLYHILTPVPPEEL 189
Query: 98 SQVNTLV 104
VN L+
Sbjct: 190 RTVNCLL 196
>BC009257-1|AAH09257.2| 430|Homo sapiens NOL9 protein protein.
Length = 430
Score = 39.5 bits (88), Expect = 0.005
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Query: 42 INGKIVALCKLTT----VDKGKMFTLGDKAIPCLGNGLVRCVDFEKQVLYIITPLPVGIL 97
+N V LCK+ G + CLG G+ R +D EK++ +I+TP+P L
Sbjct: 301 VNASWVGLCKIQDDVRGYTNGPILLAQTPICDCLGFGICRGIDMEKRLYHILTPVPPEEL 360
Query: 98 SQVNTLV 104
VN L+
Sbjct: 361 RTVNCLL 367
>AL591866-4|CAI16071.1| 702|Homo sapiens novel protein protein.
Length = 702
Score = 39.5 bits (88), Expect = 0.005
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Query: 42 INGKIVALCKLTT----VDKGKMFTLGDKAIPCLGNGLVRCVDFEKQVLYIITPLPVGIL 97
+N V LCK+ G + CLG G+ R +D EK++ +I+TP+P L
Sbjct: 573 VNASWVGLCKIQDDVRGYTNGPILLAQTPICDCLGFGICRGIDMEKRLYHILTPVPPEEL 632
Query: 98 SQVNTLV 104
VN L+
Sbjct: 633 RTVNCLL 639
>AK026976-1|BAB15611.1| 332|Homo sapiens protein ( Homo sapiens
cDNA: FLJ23323 fis, clone HEP12456. ).
Length = 332
Score = 39.5 bits (88), Expect = 0.005
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Query: 42 INGKIVALCKLTT----VDKGKMFTLGDKAIPCLGNGLVRCVDFEKQVLYIITPLPVGIL 97
+N V LCK+ G + CLG G+ R +D EK++ +I+TP+P L
Sbjct: 203 VNASWVGLCKIQDDVRGYTNGPILLAQTPICDCLGFGICRGIDMEKRLYHILTPVPPEEL 262
Query: 98 SQVNTLV 104
VN L+
Sbjct: 263 RTVNCLL 269
>S78388-1|AAB20813.1| 443|Homo sapiens autoantigen recognized by an
anti-neuronal cell protein.
Length = 443
Score = 30.3 bits (65), Expect = 3.1
Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 110 PEIVGQEKYLPDNIIVPYRITSQQKQKQLMIT-PRRRFNPL 149
P + G EK +PD++ VP++ SQ +++ +T P PL
Sbjct: 255 PFVNGVEKLVPDSLYVPFKEPSQSLLEEMFLTVPESHRKPL 295
>M63256-1|AAA51961.1| 509|Homo sapiens major Yo paraneoplastic
antigen protein.
Length = 509
Score = 30.3 bits (65), Expect = 3.1
Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 110 PEIVGQEKYLPDNIIVPYRITSQQKQKQLMIT-PRRRFNPL 149
P + G EK +PD++ VP++ SQ +++ +T P PL
Sbjct: 322 PFVNGVEKLVPDSLYVPFKEPSQSLLEEMFLTVPESHRKPL 362
>D12981-1|BAA02360.1| 443|Homo sapiens paraneoplastic cerebellar
degeneration-associated antigen protein.
Length = 443
Score = 30.3 bits (65), Expect = 3.1
Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 110 PEIVGQEKYLPDNIIVPYRITSQQKQKQLMIT-PRRRFNPL 149
P + G EK +PD++ VP++ SQ +++ +T P PL
Sbjct: 255 PFVNGVEKLVPDSLYVPFKEPSQSLLEEMFLTVPESHRKPL 295
>BC017503-1|AAH17503.2| 454|Homo sapiens cerebellar
degeneration-related protein 2, 62kDa protein.
Length = 454
Score = 30.3 bits (65), Expect = 3.1
Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 110 PEIVGQEKYLPDNIIVPYRITSQQKQKQLMIT-PRRRFNPL 149
P + G EK +PD++ VP++ SQ +++ +T P PL
Sbjct: 266 PFVNGVEKLVPDSLYVPFKEPSQSLLEEMFLTVPESHRKPL 306
>BC127114-1|AAI27115.1| 1224|Homo sapiens ZMYM4 protein protein.
Length = 1224
Score = 29.1 bits (62), Expect = 7.2
Identities = 14/55 (25%), Positives = 27/55 (49%)
Query: 80 DFEKQVLYIITPLPVGILSQVNTLVYSDWAPEIVGQEKYLPDNIIVPYRITSQQK 134
D Q I+ P+PV + + +Y+ +AP G +P +++P + S+ K
Sbjct: 648 DTPSQPQIIVVPVPVPVFVPIPLHLYTQYAPVPFGIPVPMPVPMLIPSSMDSEDK 702
>BC127113-1|AAI27114.1| 1516|Homo sapiens ZMYM4 protein protein.
Length = 1516
Score = 29.1 bits (62), Expect = 7.2
Identities = 14/55 (25%), Positives = 27/55 (49%)
Query: 80 DFEKQVLYIITPLPVGILSQVNTLVYSDWAPEIVGQEKYLPDNIIVPYRITSQQK 134
D Q I+ P+PV + + +Y+ +AP G +P +++P + S+ K
Sbjct: 940 DTPSQPQIIVVPVPVPVFVPIPLHLYTQYAPVPFGIPVPMPVPMLIPSSMDSEDK 994
>BC012093-1|AAH12093.2| 1434|Homo sapiens ZMYM4 protein protein.
Length = 1434
Score = 29.1 bits (62), Expect = 7.2
Identities = 14/55 (25%), Positives = 27/55 (49%)
Query: 80 DFEKQVLYIITPLPVGILSQVNTLVYSDWAPEIVGQEKYLPDNIIVPYRITSQQK 134
D Q I+ P+PV + + +Y+ +AP G +P +++P + S+ K
Sbjct: 858 DTPSQPQIIVVPVPVPVFVPIPLHLYTQYAPVPFGIPVPMPVPMLIPSSMDSEDK 912
>AL590434-3|CAI12468.1| 1548|Homo sapiens zinc finger, MYM-type 4
protein.
Length = 1548
Score = 29.1 bits (62), Expect = 7.2
Identities = 14/55 (25%), Positives = 27/55 (49%)
Query: 80 DFEKQVLYIITPLPVGILSQVNTLVYSDWAPEIVGQEKYLPDNIIVPYRITSQQK 134
D Q I+ P+PV + + +Y+ +AP G +P +++P + S+ K
Sbjct: 972 DTPSQPQIIVVPVPVPVFVPIPLHLYTQYAPVPFGIPVPMPVPMLIPSSMDSEDK 1026
>AL356362-7|CAI22691.1| 1548|Homo sapiens zinc finger, MYM-type 4
protein.
Length = 1548
Score = 29.1 bits (62), Expect = 7.2
Identities = 14/55 (25%), Positives = 27/55 (49%)
Query: 80 DFEKQVLYIITPLPVGILSQVNTLVYSDWAPEIVGQEKYLPDNIIVPYRITSQQK 134
D Q I+ P+PV + + +Y+ +AP G +P +++P + S+ K
Sbjct: 972 DTPSQPQIIVVPVPVPVFVPIPLHLYTQYAPVPFGIPVPMPVPMLIPSSMDSEDK 1026
>AL356362-3|CAI22687.1| 1206|Homo sapiens zinc finger, MYM-type 4
protein.
Length = 1206
Score = 29.1 bits (62), Expect = 7.2
Identities = 14/55 (25%), Positives = 27/55 (49%)
Query: 80 DFEKQVLYIITPLPVGILSQVNTLVYSDWAPEIVGQEKYLPDNIIVPYRITSQQK 134
D Q I+ P+PV + + +Y+ +AP G +P +++P + S+ K
Sbjct: 630 DTPSQPQIIVVPVPVPVFVPIPLHLYTQYAPVPFGIPVPMPVPMLIPSSMDSEDK 684
>AL160000-1|CAH71313.1| 1548|Homo sapiens zinc finger, MYM-type 4
protein.
Length = 1548
Score = 29.1 bits (62), Expect = 7.2
Identities = 14/55 (25%), Positives = 27/55 (49%)
Query: 80 DFEKQVLYIITPLPVGILSQVNTLVYSDWAPEIVGQEKYLPDNIIVPYRITSQQK 134
D Q I+ P+PV + + +Y+ +AP G +P +++P + S+ K
Sbjct: 972 DTPSQPQIIVVPVPVPVFVPIPLHLYTQYAPVPFGIPVPMPVPMLIPSSMDSEDK 1026
>AB007885-1|BAA24855.2| 1270|Homo sapiens KIAA0425 protein.
Length = 1270
Score = 29.1 bits (62), Expect = 7.2
Identities = 14/55 (25%), Positives = 27/55 (49%)
Query: 80 DFEKQVLYIITPLPVGILSQVNTLVYSDWAPEIVGQEKYLPDNIIVPYRITSQQK 134
D Q I+ P+PV + + +Y+ +AP G +P +++P + S+ K
Sbjct: 694 DTPSQPQIIVVPVPVPVFVPIPLHLYTQYAPVPFGIPVPMPVPMLIPSSMDSEDK 748
>AY219181-1|AAO60072.1| 4243|Homo sapiens fibrocystin L protein.
Length = 4243
Score = 28.7 bits (61), Expect = 9.5
Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Query: 38 VTKVINGKIVALCKLTTVDKGKMFTLGDKAIPCLGNGLVRCVDF-EKQVLYIITPLPVG 95
+T V ++ K+ +G L D A+ +GN R ++ E + ++TPLPVG
Sbjct: 1751 ITGVFPNSVIGSVKVLIEGEGLGTVLEDIAV-FIGNQQFRAIEVNENNITALVTPLPVG 1808
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.324 0.141 0.421
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,503,096
Number of Sequences: 224733
Number of extensions: 888367
Number of successful extensions: 1027
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 1006
Number of HSP's gapped (non-prelim): 22
length of query: 158
length of database: 73,234,838
effective HSP length: 84
effective length of query: 74
effective length of database: 54,357,266
effective search space: 4022437684
effective search space used: 4022437684
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 61 (28.7 bits)
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