GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001854-TA|BGIBMGA001854-PA|undefined
         (350 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein hom...    25   3.1  
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    25   4.1  
AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcript...    24   7.2  
X95912-1|CAA65156.1|  696|Anopheles gambiae immune factor protein.     23   9.6  
AY333999-1|AAR01124.1|  268|Anopheles gambiae FBN23 protein.           23   9.6  

>AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein
           homolog protein.
          Length = 394

 Score = 25.0 bits (52), Expect = 3.1
 Identities = 11/26 (42%), Positives = 13/26 (50%)

Query: 267 PQWEQAYTYGTDPGARGIICGGKGTG 292
           PQ     ++G  PGA G   GG G G
Sbjct: 79  PQTSLGLSHGPSPGAGGTGSGGSGGG 104


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 24.6 bits (51), Expect = 4.1
 Identities = 15/39 (38%), Positives = 19/39 (48%)

Query: 220 MDFVENNFSICELFTKTKNVQSCFHRASDILGCSLYLKR 258
           M FV N F   E  T+   + + FH A D L  SL L +
Sbjct: 593 MSFVTNIFRSFEAGTQLDAIYTDFHAAFDSLPHSLLLAK 631


>AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcriptase
           protein.
          Length = 988

 Score = 23.8 bits (49), Expect = 7.2
 Identities = 9/19 (47%), Positives = 13/19 (68%)

Query: 73  PETLTEIASIAVDETMPSE 91
           PE LT+  ++A D TMP +
Sbjct: 259 PEELTQAITVACDGTMPRQ 277


>X95912-1|CAA65156.1|  696|Anopheles gambiae immune factor protein.
          Length = 696

 Score = 23.4 bits (48), Expect = 9.6
 Identities = 10/33 (30%), Positives = 19/33 (57%)

Query: 309 PVLVIDLDPGQAEFTVAGNLSVTIVNEPLLGPN 341
           P+  +DL   + + T + N+ + +V  PL GP+
Sbjct: 328 PLDTVDLRRKRQKLTGSSNVFLPVVTAPLPGPS 360


>AY333999-1|AAR01124.1|  268|Anopheles gambiae FBN23 protein.
          Length = 268

 Score = 23.4 bits (48), Expect = 9.6
 Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 2/52 (3%)

Query: 168 LSVKTVESENNYQGLFSKLTAVGISVKEAEEIVTTLGEYDGILSLGPLKDLK 219
           L  KT+ ++ +Y  L  KLT +  S+KE   I+     Y   +S G L  +K
Sbjct: 14  LEYKTLTAKLDY--LQHKLTVIDYSLKEDRVIIDRRLAYQEAISEGILAVMK 63


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.316    0.136    0.399 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 359,302
Number of Sequences: 2123
Number of extensions: 14528
Number of successful extensions: 48
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 44
Number of HSP's gapped (non-prelim): 5
length of query: 350
length of database: 516,269
effective HSP length: 65
effective length of query: 285
effective length of database: 378,274
effective search space: 107808090
effective search space used: 107808090
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 48 (23.4 bits)